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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 2028 |
| Cds size | 1122 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3826.10025.1 >prot_H-paniculata_contig3826.10025.1 ID=prot_H-paniculata_contig3826.10025.1|Name=mRNA_H-paniculata_contig3826.10025.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=374bp
MNVAAAAPLPLTGASTTPGGGVPPGAPPPPPQLSAPTQQLQPTPALLPQT
ASIATAAAAVPAPQVFAPQVLAPVTATAATAATAGDVSSGGASSNGGLLL
GGTPGGGAGAGGQLIRVSSPQVGGAGMIPGTGLPGATATPLTAAMAAVAA
AAPAVAVTQQQIAVPAVPVGTSPSVTPPPSAGLTIAATAPSSALQLSGTA
AATTVAGGVPTIQPAVAGGVGVPSVLPQTTQGAPPTRMDPAAAAAAAAVA
AAAAGAAMPRAQQQDGAQQVVGMPNGVLGAAPPQQQHGNMSLLNAQQAQA
QQQQRVAHQQQFTQQNLQQFQQRNHHQQQHQHLQQQQQQQQQQHTSWQGL
PRPWVRQHNRKRNHRRRLLPLPR* back to topmRNA from alignment at H-paniculata_contig3826:3920..8991+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig3826.10025.1 ID=mRNA_H-paniculata_contig3826.10025.1|Name=mRNA_H-paniculata_contig3826.10025.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5072bp|location=Sequence derived from alignment at H-paniculata_contig3826:3920..8991+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CACAAAGGGGAGGAAAAGTGAGCTCGAGGGTGGAAACACCAAGTGTCCAA
ACTCGCTCACGGGCGAACCTACGAACTCCAAACCAGCACAATCACGTGAG
TAATGGGTAACTGAGCGATATTTGGCCGTCGATTTAGCGGTTCCCTCGCC
CGTCGTGGCGTTGTTCGCGATCGCCCGCGCGCCTTGATTTAGGATGATTT
GGGGCTTTTTTCGAGTCGATACACCGCCTTCCCGTCCCCGGAAGGGCGTA
TGCGTCCCAAAGCACGGTCATGCGGGGGGTTAGAGTGATTATGTCGAAGA
TCTGTCGCCTCCGTGTGTCTGGTCCACCGCTTTGACGCGTTTGTTTCTCG
CCCCATCTCCAGAGCTTAAATACTTAAGTAGTCCCCCTCTTGGACGCACG
CGTGTCTTCATTTTCTACACTGATTTTCTATTGAACCAGCTGATTTTTGT
ATTGGGGGCTAACTAGGTTATGCTGCTTTTTGTGTTTTTTTTCCCCTCTC
CCTTCTGCCTCCTGCACACGTACACACTGTTTTTCTCTACAGAAGGTGGT
ACTGTACTACACTGACTTGTACTGTCAGTGTACTCTGCTGTACTGTATTG
AACTCACCTAGCACAGCAGGTGCAACGTAGAGTGTTGCTGGTTACACAGG
GGCGGGCGGTTTTGAAGTTGATGTTTCGAGCAGGTCATTTTCTGTTGCCT
GCATGTTGCCTTGTCAACCGGTGTGTCGCGTGTTGTCGGTAATGTTTTGA
TTTGCCAAACCTTAAAGGTGATGGAAACAGGAACATTTGAAAACGTACCT
TTTACAGAGTTGAAAAACGCAGCAATGTCGTTTATAACTGCAGTAATTGT
AGTTGCTGTTTAGCGTGCTCAAGAGTTTAGGCCACTTGAGCGCCATATAC
TATAGGACGGGGTGGGTATAGGGAAGCTTACATCTACGAGGTTGGAGGTG
ATGACTGTAATACAGTCAGTGTAATTTGTGCCATATGCGGGAATGTGCTT
ATGTTGGTGACACTTCGTTGTTCCAACAGGCACCTGCAGCGGGTAGGAAC
GTTGGGTTTTCTCGCATAATTCACAAGTTGCACTACTTGGCGTTGTCCAA
CACTGGCAGTATTACCCTGCTTGTAGTTCCCGCAGTGCGATGTTTGTCAG
TCATCTTCAGATGTGTTGCTGCCTCTGCCTTCCTGCGTGGTGTGCGGTCC
ATGTTTCTACTACAACCTCCGTGCTGTAAACTGTTACCCAGTGCTTTCGT
GGTGTTGAACGATTGCGATAATTATTGCCCCTGCTAAAAACCAACGAAGA
TTATCTATTGACGCCACTCTGGCTTCGCTGTGTATCTGTTTTTGATGCGA
GTTGCAGCCGAGGAGGCATACTTGATTTTGGATTAGAATTGGAATGAGGA
CTGGTGCAACTAAAAATAATTGCACTATATATATATATATATATAATGTA
CAGCTCCTCACGAAGTCCTTGGTGATTTTGGAGCATCCCAACGAGCGCCA
GTCACAGTTAGTAAATAATAGCCCCTTTTTTGGTCATTATTTTTTTGTCA
TGATTCTCCCCCCTCTCCCCTTCCAAGTGTTTCGATCGCGCAAATAAAAC
CCTTCAAATTACCCCAATGTACGTCATTTGAAACCGCATTTCCAGCAGGA
TTAACACACAAAGCGTGCGTGTAAATTTGAACACGTCGATAGAAGAGGAA
GAGAGAAAAAGAGAGAGAGAGACCACGCGTCCCACGTGCGTGAACAAACG
TCCTTTTTTCGAGAGGGACGAAATCCCGGGGGAAGTATATTTTACAGGAC
GCAGCTTGACTTCAGGGAGTGCCATCGACCAGATCCGATATCGAATTTAA
CAGCAAGTCGTGCGGCCGCGAGAGCAGCGGGCAGCTGCCGGAGGAACACC
GTGGATAAGGGCGGCGCTGAAGCAGGCAGGGACGCTGCAAACAGCTGGAG
GAAGCAATCACGGCGCAAGCAGCTCAGGTAGGAGGGCTGGGTGCTCCCCA
ACCAGAGCAAACGCCCCCGGAGAGTGGAAGCCCGCCGCTACCGGCGGCGG
CTGCGGCAGTAGCGCCGCCACGACCTATGAACGTGGCCGCAGCAGCGCCA
CTTCCTTTGACAGGCGCGTCCACGACGCCGGGCGGCGGCGTCCCGCCGGG
TGCGCCACCACCACCACCGCAGCTTTCGGCTCCCACACAACAATTGCAAC
CCACCCCTGCGTTGCTGCCTCAGACAGCGTCGATTGCAACGGCGGCGGCA
GCGGTTCCAGCGCCGCAAGTATTTGCACCGCAAGTGCTAGCGCCGGTTAC
TGCTACAGCGGCAACAGCAGCAACAGCGGGTGACGTGAGTTCTGGAGGTG
CTAGTTCCAACGGGGGCTTGCTATTGGGAGGGACACCCGGAGGCGGAGCA
GGAGCAGGGGGGCAATTGATCAGGGTGTCTTCACCGCAGGTTGGAGGTGC
GGGAATGATACCGGGCACCGGGTTGCCTGGCGCTACTGCTACGCCTTTGA
CGGCGGCGATGGCGGCGGTAGCTGCAGCAGCACCCGCCGTAGCGGTGACT
CAGCAGCAGATCGCGGTACCGGCGGTACCCGTGGGGACCTCTCCATCTGT
GACGCCACCGCCGTCGGCGGGGTTAACGATAGCGGCCACCGCGCCTTCTT
CTGCGCTACAGCTTTCGGGGACGGCGGCGGCGACGACCGTGGCGGGTGGA
GTGCCGACAATACAGCCCGCGGTCGCGGGCGGGGTGGGTGTGCCGTCAGT
CTTGCCGCAGACCACTCAGGGGGCGCCACCGACGCGGATGGACCCGGCGG
CAGCAGCAGCAGCGGCTGCGGTAGCGGCTGCGGCTGCGGGCGCAGCGATG
CCGAGGGCGCAGCAACAAGATGGAGCTCAGCAGGTAACTTGTAGCTGTGC
TCGGAGCGAGCTTTATTGTGTGTGAGGGGGGGTTGCGGTGCGAAATGGTC
GTATGTGAGCGCGCGTTGCACGTGGCTCTCGAGGGTTGTCTAGTAATGGT
GTGTTGTGCATCTTCTCAGCTACGGAGAAGTTTTTGTCAACGATAACTCA
TAAGGTATTGAACTTTTATACAACTCAAAAGATTCCGTCATGTACTCGTA
CTCGCGCTCCTCTTGTTTTTGCATTGGGTGCTTTGTTTCGGGAACTCATT
TTTGTTGTTGTCATGGACGATTTATTGCGATCCCCCCCCCCCCCGATGCT
TCTCTTGTTTCCAGTCGCTGCTGTACTCCAAATCGTGTCGACGCATGTGC
GTTCCAACCACGTGCAGTAGTTTGCTTTCGTTGTGAGTCCGTTTCGTTCT
ACCAGCGTACGAAGTACGAGGCGACAGGTGAAGACTAAATACCTATGAAA
TATTGGATATGAACCACGGAACTAGATGGTAACGATGCACAAGTCTGACC
TTGACCCTTTGACTCCTAGGGGCTGCAGTGTGATACTTTTTGGCAGGCGA
AATATCACACTCCCGTGTCCGTAAATGGGGGGGGTGTGTGAATGTCGAGC
GGCGGGTACCGGTTTGGAATCGACGAAAGTTGTTTCGGCGGGGATGGCAT
CATACCGGTGTACCATGAGATGAATATAACCGCGAGATATAAAATGAGAA
ATGTGCGACGGAATAAACAGTACCCAGAGACTTCGGGAGCAAAAGGGGGG
TCAAATTGACAATTTTCATTTCAACCATTGCACGTACACTACTGTTTTCC
TGGAGCTGCAACGTCAATTCCTTAGTAGTCGTGTGGAGATAGTACAGCTT
ACAGACTGCATCACACACATTGGTTTCCTCGAGCGGTGGCAGCCAGCTAA
ACAGCGTAAACGGCACGATACAATCAGTAGAGTTTTGCATGGCCACGGAA
AAAACAGACAACAGAGTAGAATGCATGCAACAGTTGGTGTACTTCTGCAG
CAACACATCTCTCTGCCCGGTACCACTCGGGTAACAGTAACATAAAAGAG
AGGGAAAAGAGCTTGAGAGGCACCAGCATCTCCCGAGAGAATCTTCGGTG
GCCAGCGATAGCCGTTGCGTGAATGGTCGTGTCATTCGTGACGTTATCCA
TAGACACAGCAGCTAGCCGCCTGTCACAGTCGGAACATGACAATGCGATT
GTGGCGTAGTAAATATTGTAGCGTTGGGATTTGTAAAAATAGTTTTTCTA
TCAATCTGTTACTATTTTTTTTTTCAGGAGTCCAAGACTTGAGCGAAGGA
ACCAGTTTTTTCCCTAAAACACTGGAAAATAGTGTAGAATATGGCCACCT
GGGATCCCCATCCTCAAGGTTAACGTTCTCACCAACTTTTCGAAGTCAAC
TATACCCTTGTGTGCGTTCAACCGTAACCAGCAGGTAGTCGGCATGCCGA
ATGGTGTCTTGGGCGCTGCGCCCCCACAACAGCAGCATGGTAACATGTCG
CTTCTGAATGCACAGCAGGCACAGGCGCAACAGCAACAACGAGTTGCTCA
TCAACAACAGTTCACGCAACAAAATCTGCAGCAGTTTCAGCAGCGCAATC
ATCATCAGCAGCAACACCAACACCTCCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCTATTCCATCAACAGCAGCCGCAGCAACATCAACATCAACA
GCACCTCGTGGCAAGGTCTCCCTCGTCCATGGGTACGCCAACACAATCGC
AAGCGCAATCATCGGCGGCGACTTCTTCCACTTCCGCGCTGACCACCTCC
GTCTCCTCCATGGTGGGCGGATCCCCTGCTGTAGCACCCGCCCAGCCCCC
CATAGCGCTAAACAGTAACGGCATTGGCTCCACCGCCGCGGCAGGTGCGG
GCGTCGTTCGCATCGGCGGTGGCGGGTCAAGCGTGGTCTTGGGGAACGTG
CAGGCGTCCACGAGCATGTCGCCGATTTCACCACATCTGCAGAGCCAGCA
GGTTCAACAGCAACATAGGGTGGTACAGCTGGTACATAAGCAACAGCTTC
AGCAGAGGTCGGCAGCGGCGACGGCCGGGACGGCAGTACCGGTCGGTGCT
GGCGGCAGCGGCGGCGTTGGGACTGCTTCTTCGTCTGCCGGGTTAGCCGC
TACTGTTGGTGCTAGTGCGGGT back to topCoding sequence (CDS) from alignment at H-paniculata_contig3826:3920..8991+ >mRNA_H-paniculata_contig3826.10025.1 ID=mRNA_H-paniculata_contig3826.10025.1|Name=mRNA_H-paniculata_contig3826.10025.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2244bp|location=Sequence derived from alignment at H-paniculata_contig3826:3920..8991+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAACGTGGCCGCAGCAGCGCCACTTCCTTTGACAGGCGCGTCCACGAC
GCCGGGCGGCGGCGTCCCGCCGGGTGCGCCACCACCACCACCGCAGCTTT
CGGCTCCCACACAACAATTGCAACCCACCCCTGCGTTGCTGCCTCAGACA
GCGTCGATTGCAACGGCGGCGGCAGCGGTTCCAGCGCCGCAAGTATTTGC
ACCGCAAGTGCTAGCGCCGGTTACTGCTACAGCGGCAACAGCAGCAACAG
CGGGTGACGTGAGTTCTGGAGGTGCTAGTTCCAACGGGGGCTTGCTATTG
GGAGGGACACCCGGAGGCGGAGCAGGAGCAGGGGGGCAATTGATCAGGGT
GTCTTCACCGCAGGTTGGAGGTGCGGGAATGATACCGGGCACCGGGTTGC
CTGGCGCTACTGCTACGCCTTTGACGGCGGCGATGGCGGCGGTAGCTGCA
GCAGCACCCGCCGTAGCGGTGACTCAGCAGCAGATCGCGGTACCGGCGGT
ACCCGTGGGGACCTCTCCATCTGTGACGCCACCGCCGTCGGCGGGGTTAA
CGATAGCGGCCACCGCGCCTTCTTCTGCGCTACAGCTTTCGGGGACGGCG
GCGGCGACGACCGTGGCGGGTGGAGTGCCGACAATACAGCCCGCGGTCGC
GGGCGGGGTGGGTGTGCCGTCAGTCTTGCCGCAGACCACTCAGGGGGCGC
CACCGACGCGGATGGACCCGGCGGCAGCAGCAGCAGCGGCTGCGGTAGCG
GCTGCGGCTGCGGGCGCAGCGATGCCGAGGGCGCAGCAACAAGATGGAGC
TCAGCAGATGAACGTGGCCGCAGCAGCGCCACTTCCTTTGACAGGCGCGT
CCACGACGCCGGGCGGCGGCGTCCCGCCGGGTGCGCCACCACCACCACCG
CAGCTTTCGGCTCCCACACAACAATTGCAACCCACCCCTGCGTTGCTGCC
TCAGACAGCGTCGATTGCAACGGCGGCGGCAGCGGTTCCAGCGCCGCAAG
TATTTGCACCGCAAGTGCTAGCGCCGGTTACTGCTACAGCGGCAACAGCA
GCAACAGCGGGTGACGTGAGTTCTGGAGGTGCTAGTTCCAACGGGGGCTT
GCTATTGGGAGGGACACCCGGAGGCGGAGCAGGAGCAGGGGGGCAATTGA
TCAGGGTGTCTTCACCGCAGGTTGGAGGTGCGGGAATGATACCGGGCACC
GGGTTGCCTGGCGCTACTGCTACGCCTTTGACGGCGGCGATGGCGGCGGT
AGCTGCAGCAGCACCCGCCGTAGCGGTGACTCAGCAGCAGATCGCGGTAC
CGGCGGTACCCGTGGGGACCTCTCCATCTGTGACGCCACCGCCGTCGGCG
GGGTTAACGATAGCGGCCACCGCGCCTTCTTCTGCGCTACAGCTTTCGGG
GACGGCGGCGGCGACGACCGTGGCGGGTGGAGTGCCGACAATACAGCCCG
CGGTCGCGGGCGGGGTGGGTGTGCCGTCAGTCTTGCCGCAGACCACTCAG
GGGGCGCCACCGACGCGGATGGACCCGGCGGCAGCAGCAGCAGCGGCTGC
GGTAGCGGCTGCGGCTGCGGGCGCAGCGATGCCGAGGGCGCAGCAACAAG
ATGGAGCTCAGCAGGTAGTCGGCATGCCGAATGGTGTCTTGGGCGCTGCG
CCCCCACAACAGCAGCATGGTAACATGTCGCTTCTGAATGCACAGCAGGC
ACAGGCGCAACAGCAACAACGAGTTGCTCATCAACAACAGTTCACGCAAC
AAAATCTGCAGCAGTTTCAGCAGCGCAATCATCATCAGCAGCAACACCAA
CACCTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTAGTCGGCATG
CCGAATGGTGTCTTGGGCGCTGCGCCCCCACAACAGCAGCATGGTAACAT
GTCGCTTCTGAATGCACAGCAGGCACAGGCGCAACAGCAACAACGAGTTG
CTCATCAACAACAGTTCACGCAACAAAATCTGCAGCAGTTTCAGCAGCGC
AATCATCATCAGCAGCAACACCAACACCTCCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCACACCTCGTGGCAAGGTCTCCCTCGTCCATGGGTACGCC
AACACAATCGCAAGCGCAATCATCGGCGGCGACTTCTTCCACTTCCGCGC
TGACACCTCGTGGCAAGGTCTCCCTCGTCCATGGGTACGCCAACACAATC
GCAAGCGCAATCATCGGCGGCGACTTCTTCCACTTCCGCGCTGA back to top
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