mRNA_H-paniculata_contig382.10014.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig382.10014.1 vs. uniprot
Match: D8LEQ1_ECTSI (Ciliary dynein heavy chain, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEQ1_ECTSI) HSP 1 Score: 1862 bits (4823), Expect = 0.000e+0 Identity = 1254/2780 (45.11%), Postives = 1609/2780 (57.88%), Query Frame = 3
Query: 2793 LRHEARVQPAGNHRWALPIDEEEMGELYTLALETSAL-----DGT------GVDRLMVREWREMFRSRVMMGGCRKPTDLRIMPSFCSRISLPENCLSVPKAIQLACDVIPHAVETLAISNPLGAKPVLLEMFQAELTPNLCREFFFPVSHRFHGENQGMTEDTFMSAALKLSAECVGGIDAHLSDVSSDFSDEEQEKREINTEQSLPITVEQVKQKGPGVVANARRLTATFACSQLVCTPSETNGSDVCVQVCSYEDQDSYSVPPSPTA----ITSSP----KIQVHIEGKFRDWELQVVPPLSEFVERTRRAQVTVLGTLAGIPCLFEHPHTKPYVEMADSHGLGLNLPQQSSAPLIGESGSLETRIEDSAMPFRSVSTTKGLGKQAEQEEVLAQCDWLEVLSEDRYFRGIQDQVFLSLATSHNAVYRMLNGFRPLLDEFKALAIFTSERDERNKRLQRGADADAEADRLISGNCGRGPRRTSCGNGDWDPRAQGVFIAMEATEWLRGWYSRFKRYRGIVRAKTIDSPQALLAVNATKLVSYLLALPEASLQDIRRMGLPLMMDAARRLAAILRRCNVLLSGGLVGVDAMGEKAGFLTFVSGLLGRLSEEVKNVEALGDLLRDIGCFDPPPSP----VTPSPIETLQYP-STDPLAQDVAVVKVEGGRTVQIFGEEKHRGSRGVVDDPRPNEEGPELVGIASPDKTSEPAGTSVDDSTEKRTSNGDEER----IDTTSVASFSFRSAESQRQEAVEGLRFHLSALYRAVDLANSNMRDARQDFGVLLHKALASLARDVERLEADITAPFLAEASTDPFKACARLDRCYTRLVDMQEKDARYQRYSELLDSDLFGMVGNRGATPNAKQREGLKRQKDKEKIGLDLERVAAVREKEMLKWNAQRMSCELRRQWESSILVSCQPGYMARLHEQAGRAHIAAVSAAGNCA--VKAACAATLEHLGRVLSVIGSLLNRNLTAAYWERVEAVLPLDEALKNTARNENMSTLRRAAGLESSPTITATKGKTEREDGESPPQSSMTGEATNHHVQSTDISSSVTQHTMDIAATTSAPRSTKFGGGLLSMIARTSTKGNTDGGRMPGDDGQVRGSKVSKIFT-VAGRTRREEVRRRMELHEVFPMAAEWGGLTLATLLNHGVLEKRENIKAISAEATASALLRQTLEELECSWQGTTMQFNWYFNEHLPSPGNTKQQPVVDADSLNKRRLYARVLAEPPLVTSGYTASNIAGAGGEKA---SRDAPASEGFTALLSNGDELLRLAEHCRVVIDNVVDAPAALLAAGNIHDAALGWQKKISWFQELITQWMAVQEQWVRLAPAFVPDDLEDGAPSNDRIRFTELSGGFQSLLGTMRTENRLDILAEKQQEAEIEGRGRSLLAKVRKMQEDLEGISHTMDKWLNSCASLCPRLLALPSHQLFRFSRDWAAGRVGSGSAAGETNERMALMFRGVGEIIWEKIVRTRGNSIGSVQMAAAGVCSSGAGLETVNFPSPITAKGRLELWVRDLDRQIVSSIVRDVDTTVKVLGGRVRGGGTIGEGGSGASVKSENPGISHLHSRGTSDSSKPNTGTTATTQNRGNPDKGGGNGPK-IDGEAEDIPR-PCVQGHLLARSVHWTRLVEAALIQGISL-LASTNG-----------VVDNPCESESRLQGVLSALLLYLDGWVGELRQPGSISLYSSITNTALITQAVQQRDVVEELLK-VFSPSFALTSTASSDIRGKTTVATGRADAAGVTDSARAHDGDTAFISSSSVPLSSSFPARGLMSRTALSSAAEEDAVSADG-FPFTWTCHLRHYHVPVAEAL-LTESAGGREE--------STRKYCEIEGSDNR-RYRRNDEDTGNMPXXXX-LLTVGLGTWKIPYGFEYAGTLERLWLSPLSERCLLHAAQSATGHFGGLLLSSCGQHPSQNPATRNGLASLSPTSICRSSYPNEDTMGITTVALDLSLAYGRAFRLLPGSCVTSPQAVSNVLASTLMAGGIAAFPGINELPKVSLAVLSESLRAVLLCLHAGQDRVLINGEEVPLSQKPHLHPEYDPLLHQWRLLPSAGTVETTEGNSGGGAGGL------FIGVFATLSRQQGFPIAELPLSIRAAFRPVLTSPPNVLVLLEAMLLTNGFSGAKCLVQGVVQGLRELMKSIIGEIDQASFRTKDTETTVHDGGVLRVMLQSRDLPAAQEETQQAISEVDTMAN-------LHMVVRRAVRTATELVGPETAKELRAARRKLGLHSLTISERKAKVDILSRSVEARVVIAGFVRAFIAFEQ--GDAEMLFGAK------------------------------NGVARAGDAGSGQIDSRRAEMVAIFEGTEAFREMLKPLVELESAGRRLAQQNAKARASELAESGTAHRSRDMAEFKAMVKRALIVNGMSPTKDQVKAGTELWEALWSCRSSVVVVTGAAGVGKSAIIHAMTKMSSYVELLNSKLNKALKKKQTEKENAADRKEGPAIGVLRGSQRPTSDEQPCASRLDPPGAIFEPPANARGAAPYRRIVNRQVSFIEYVNLTSTYR-GGSKCKASGSGGTVASSXXXXXXXXXXXXXXXXXXTSN-DSDGGASVFSQRSALSKGAGSCAGGASVMSFGSSKISVGS-GARGMPCTTVEGSAFVVPAHEVEVVYTGACRVDQLMGSTDERGVWHDGLLLRRLRVLVEGNRDGLACDIGGYRHRVVGAGTGDVCPLPTGAATSGFSHGCRSRLLVLDGPVFRCLEDMVAGDLAGTPSLTSSE 10805
LRHEAR + N RWAL +DE +M +L TLALE L DG+ G D +V +WR+ FR V G ++ + +FCSRIS+ +NCLSVP+AIQLAC++IPHA ETLAI NPLGAKPVL+E F+AE+TPNL E FFP++HRF GE +G+TED F+SAALKLSA C+GGIDA LS+VSSDFS+EE + E L E+ ++ + N T + + S T+ V+V ++ + S+ P + I+++P ++V + G F +W+LQV PPL +FV R ++AQV VL LA +PC+ EHP KPY M + +GLG LPQ + E + T +++ R ++ T +Q E + +C WLE LSED Y+RG+QD+VFLSLA+SHN+VYRM++GFRPLL EF+AL FT+ER+ +RLQ +D DA A +I+ +RT G D V +A TEWL WYSRF+R+R VRA IDSPQALL++NAT L++YL+A+ FL + L +L +EV+ ++ LG LL+ IGCFD P P T S + + S+ PL+ E + F K G D P + +A ++ ++P DD + S G + D + FR+ E+Q +EA E + +HL L R+VD A+ NMR A Q+F LL KAL SL+RD++RLEADI P L+ ASTDP KAC+RL+ RL D+QE ++RY YS LD D+ + G K Q D+E + LDLERV A R + +LKW AQR + +R++WESS L+ C MA + RAH AV AG CA V A+C ATL HLGRV+ +G L NR+L+AAYWERVE +PL+E LK AR E M LR AAGLE P E + PP S+ GE T ++ T ++ SV + + + P S+ + S +A D G G++R SK + + + VAGR RR + RRR E++EVFPMAAEWGGL+LATLLNH +LEK + I +ISAEATASA+LR TLEELE W+ M F W FNE P+PG TKQ P VD+DSL +RRLY+RVLAEP LV GY+A IAG + D PASEGFT+LLSNGDELLRLAEHCR+V+D+VVDAP+ALLA GNI AAL WQK+ISWFQE++T WMAVQEQWVRLAPAFVP+ L+DG P++DR+RFT++SG FQ++LGT+R + + +LA KQQ AE GR SLLAKVRK+Q+DLEG+S TMD R RDWAAGRVGSG+AAGETNER A MFRG+GEI+W+++V T G ++ MAA GV GAGLE V F SPI A GRLE+WVRD DRQ++S+I DV+ L + + GG G G S + PG+ L G SS T + ++ G+P GG+G +GE R P VQG LLAR HWT +E+ L IS L ST+G N E ++LQ VL +LLL L+ W GE QP ++ Y+S+T TAL TQA+QQRDVVEELL+ V P + + T S+ G+ GR G+T S++S SS AR S E + FPF W CHLRHY+ E L A R + S G+ N R D++ ++PXXXX L+ V +G W +PYGFEYAGTLERLWL+PLSERCLLHA A +AVS+V+ASTLMAGG+ F G++ELPKVSLAVL+ESLRAV+LC+HAGQ++VL+NGEEVPLS PHL P +DP+LHQWRLLP GN F+G FATL+R P +LPLS+RAAFRPVLT PN+ ++LEAMLL+ GF GA+ LV G+V GLREL ++I S T ++H G + + + + + + + D++ LH V +AVRTA EL+ PETA+ELRAARRKLGL SLT SERK K LSR+VEARV+IAGFVRA + FE+ GD L K N A DAG +ID+RRA MV+ F+ T+ +E+LKPL ++ + GR+LAQQN K RA+ELAESGTA RSRD+A+ K + KRALI+NGMSPTKDQ+ A ELW+ALWSC V++TGAAG+GKS+I+ AM KM+ +V+L+N KLNK+LKK+ + A +++G G + + P AS LDPPGA+FEPPAN+RGAAPYRRIVNRQV F+ YVN TST R GG+K S GGTVAS S SDGGASVFSQRSA GS VG G+ G+P T+EGSAFVVPA E+EV+YTG C + L+GSTD++G W DGLL+RRLR LVEG R G RHR G GTGDVC P G ATSGFSHGCRSRLLVLDGP+ R LE ++A D AG P LT E
Sbjct: 215 LRHEARPYDSWNMRWALAVDEGDMADLSTLALEACLLEEATGDGSEAGAEEGAD--LVVKWRKAFREAVTSTGGKRDSLAPSRFNFCSRISVQDNCLSVPRAIQLACELIPHATETLAIKNPLGAKPVLIETFEAEITPNLRGEEFFPITHRFSGEQKGVTEDVFLSAALKLSAACLGGIDAQLSEVSSDFSEEEDGEVEALMVSRLAADEEKQREHARPINENKDHRNPTVLDASMWDANSNTDSLSG-VEVAAHPSRTRTSMRPEHLSEIYGISTAPCGGISLKVDVRGNFEEWDLQVFPPLEDFVRRAKQAQVQVLTALARVPCILEHPDVKPYQTMVEGYGLGFELPQGGDEEIASERENTSTSWQETG--GRGIAETTHRMEQV-AEGPMDECGWLENLSEDPYYRGLQDKVFLSLASSHNSVYRMVDGFRPLLQEFQALGTFTAEREREYERLQSTSDPDAIAADVIAS-----AKRTGNKAGCLD--LSPVLLAKPTTEWLHSWYSRFERFRQTVRATKIDSPQALLSINATDLITYLVAV-------------------------------------------------FLCQIEQWLWQLRDEVQKLQELGILLKKIGCFDAWPLPRLAVKTGSGVVSANGDGSSMPLSPPTTSKPAE----ITAFSPTKTSRGDGNGKDETPTND------VARSEQQTDPP---PDDGGKNNVSRGTAGKSCGFFD--DRGGYDFRAVENQTREATENVGYHLVVLQRSVDQAHINMRIASQEFSSLLRKALESLSRDIDRLEADILDPALSNASTDPTKACSRLEGYRQRLADLQEDESRYHHYSGFLDKDVVRALAKGGG----------KNQFDEENMRLDLERVGAERRQLVLKWEAQRKAVHIRQEWESSALIFCDADVMASQLSRVVRAHAFAVETAG-CADEVSASCEATLAHLGRVVEAVGFLHNRDLSAAYWERVEQAMPLNEDLKRAARKEFMPALRHAAGLEKGPPADINDNNGESFNQAEPP-SAEKGEKT--AIEKTGVADSVDPLATESTDSVTGPSSSGTAK-VFSSVATRVIPPKFDAG------GKLRVSKAAAVVSSVAGRERRGDARRRAEVYEVFPMAAEWGGLSLATLLNHELLEKIKVIGSISAEATASAVLRNTLEELEGVWEAAPMIFLWRFNEGAPAPGITKQSPTVDSDSLRRRRLYSRVLAEPALVQQGYSAGTIAGGXXXXXXXXASDLPASEGFTSLLSNGDELLRLAEHCRLVVDSVVDAPSALLAVGNIGQAALEWQKRISWFQEILTNWMAVQEQWVRLAPAFVPEHLDDGVPAHDRVRFTDVSGSFQNILGTLRADTCMTVLAGKQQGAERGGR--SLLAKVRKLQDDLEGVSITMD----------------------RLFRDWAAGRVGSGAAAGETNERAACMFRGIGEILWKEVVSTNGTTV-RTHMAATGVRCCGAGLEAVPFSSPIPAVGRLEIWVRDFDRQLMSAIAEDVEIAANSLR-QYQAGGGFGHLGLRTSGLNAIPGL--LPKSGIPSSSNKPANTATSERSGGDPYAVGGDGDGGKNGEQTTTGRQPSVQGQLLARGAHWTAQIESVLACTISEPLHSTDGGNGGGGAAGVSAATNKPE-RNKLQDVLESLLLSLNAWSGEFSQPDGLTAYNSLTITALTTQALQQRDVVEELLQTVLMPPPSPSPTPPSENGGQ-----GR------------QAGETLATSAASGMAPSSPTARSAPSSINGHRDREHGIDEEENYFPFLWACHLRHYYTSPEEVQPLNGRAQQRSDLQTDNDDRSDHGAAGSGGTKNEGRGGYEDQENDSVPXXXXXLIRVSVGPWNVPYGFEYAGTLERLWLTPLSERCLLHAVHCA-------------------------------------------------------------------------KAVSSVIASTLMAGGVTVFAGVDELPKVSLAVLAESLRAVMLCMHAGQEKVLVNGEEVPLSTTPHLLPNFDPILHQWRLLPWGRQRAAGAGNCYHNXXXXXXXXXPFLGFFATLARTG--PDPQLPLSVRAAFRPVLTVLPNIPLILEAMLLSRGFVGARALVLGLVGGLREL-QNIPAPCHTRSDGNAGTPGSMHTGKLSFETATAAEKSSNKSSNNRCSAGGDSVTRPADPATLLHTVAVKAVRTAAELLAPETARELRAARRKLGLASLTSSERKEKTKHLSRAVEARVLIAGFVRALL-FEETGGDPRALKSQKTKKPALSTSGNTNSXXXXXXXSAPKIVPVDNLAATPKDAGQLEIDARRAVMVSTFQKTQVLQEILKPLEDMAATGRKLAQQNLKLRATELAESGTAIRSRDVAQLKTLAKRALIMNGMSPTKDQIDAAAELWQALWSCSRPAVIMTGAAGIGKSSILQAMPKMAEHVDLINRKLNKSLKKQVPK---AKKKQDGAEAGGA-------TTQHPNASVLDPPGAVFEPPANSRGAAPYRRIVNRQVPFLAYVNATSTGRKGGNK---SDDGGTVASGASGSSKGTKATTISETSNVSGASSDGGASVFSQRSAAXXXXXXXX---XXXXXGSGVARVGKCGSGGIPPATIEGSAFVVPAQEIEVLYTGGCSAEHLIGSTDDKGCWLDGLLVRRLRALVEGVRGGACTTAKRSRHRACGVGTGDVCLPPAGKATSGFSHGCRSRLLVLDGPISRVLEGILASDHAGGPPLTGPE 2757
BLAST of mRNA_H-paniculata_contig382.10014.1 vs. uniprot
Match: A0A6H5KFY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFY1_9PHAE) HSP 1 Score: 775 bits (2000), Expect = 6.790e-231 Identity = 550/1356 (40.56%), Postives = 723/1356 (53.32%), Query Frame = 3
Query: 2772 MIASRAMLRHEARVQPAGNHRWALPIDEEEMGELYTLALETSAL-----DGT------GVDRLMVREWREMFRSRVMMGGCRKPTDLRIMPSFCSRISLPENCLSVPKAIQLACDVIPHAVETLAISNPLGAKPVLLEMFQAELTPNLCREFFFPVSHRFHGENQGMTEDTFMSAALKLSAECVGGIDAHLSDVSSDFSDEEQEKRE------------INTEQSLPITVEQVKQKGPGVVA----NARRLTATFACSQLVCTPSETNGSDVCVQVCSYEDQDSYSVPPSPTAITSSPKIQVHIEGKFRDWELQVVPPLSEFVERTRRAQVTVLGTLAGIPCLFEHPHTKPYVEMADSHGLGLNLPQQSSAPLIGESGSLETRIEDSAMPFRSVSTTKGLGKQAEQEEVLAQCDWLEVLSEDRYFRGIQDQV---FLSLATSHNAVYRMLNGFRPLLDEFKALAIFTSERDERNKRLQRGADADAEADRLISGNCGRGPRRTSCGNGDWDPRAQGVFIAMEATEWLRGWYSRFKRYRGIVRAKTIDSPQALLAVNATKLVSYLLALPEASLQDIRRMGLPLMMDAARRLAAILRRCNVLLSGGLVGVDAMGEKAGFLTFVSGLLGRLSEEVKNVEALGDLLRDIGCFDPPPSP---------VTPSPIETLQYPSTDPLAQDVAVVKVEGGRTVQIFGEEKHRGSRGVVDDPRPNEEGPELVGIASPDKTSEPAGTSVDDSTEKRTSNGD-----EERIDTTSVASFSFRSAESQRQEAVEGLRFHLSALYRAVDLANSNMRDARQDFGVLLHK-------ALASLARDVERLEADITAPFLAEASTDPFKACARLDRCYTRLVDMQEKDARYQRYSELLDSDLFGMVGNRGATPNAKQREGLKRQKDKEKIGLDLERVAAVREKEMLKWNAQRMSCELRRQWESSILVSCQPGYMARLHEQAGRAHIAAVSAA-GNCAVKAACAATLEHLGRVLSVIGSLLNRNLTAAYWERVEAVLPLDEALKNTARNENMSTLRRAAGLESSPTITATKGKTEREDGESPPQSSMTGEATNHHVQSTDISSSVTQHTMDIAATTSAPRSTKFGGGLLSMIARTSTKGNTDGGRMPGDDGQVRGSKVSKIFT-VAGRTRREEVRRRMELHEVFPMAAEWGGLTLATLLNHGVLEKRENIKAISAEATASALLRQTL-----------EELECSWQGTTMQFNWYFNEHLPSPGNTKQQPVVDADSLNKRRLYARVLAEPPLVTSGYTASNIAGAGGEKA---SRDAPASEGFTALLSNGDELLRLAEHCRVVIDNVVDAPAALLAAGNIHDAALGWQKKISWFQ 6638
++ R LRHEAR + N RWAL +DE +M +L TLALE S L DG+ G D +V +WR+ FR V G ++ + ++PS RF GE +G+TED F+SAALKLSA C+GGIDA LS+VSSDFS+EE + E E + PI E + P V+ +A T + + + + P T S + + Y + P S ++V I G F +W+LQV PPL +FV R ++AQV VL TLA +PC+ EHP KPY M + +GLG LPQ + E + T ED+ RSV+ T +Q E + +CDWL+ LSED Y+RG+QD+V FLSLA+SHN+VYRM+NGFRPLL EF+ + D DA A +I+ G R G+ D P V +A TEWL WYSRF+R+R VRA IDSPQALL++NAT L++YL+ALPE L+D+R +G LM++A L A+ RRCN +LSGGL GVDA+GEKA FL + L +L +EV+ ++ LG LL+ IGCFD PSP P+ + P + PL VV + F K G D P G+A ++ + P + + R G ++R + FR+ E+Q +EA E + FHL L R+VD A+ NMR A Q+F LL K AL SL+RD++RLEADI P L+ ASTDP KAC+RL+ RL D+QE +RY YS LD D+ + GA K Q ++E + L LERV A R + +LKW AQR + +R++WESS L+ C MA +A RAH AV A G V A+C ATL HLGRV+ +G L NR+LTAAYWERVE +PL E LK AR E M LR AAGLE P E + PP + + GE N + T++ SV D+ + + P S+ + S +A D G G++R SK + + + AGR RR + RRR E++EVFPMAAEWGGL+LATLLNHG+LEK + ++ L R T+ +ELE W+ M F W FNE P+PG TKQ P VD+DSL +RRLY+RVLAEP LV GY+ IAG G + D PASEGFT+LLSNGDELLRLAEHCR+V+D++VDAP+ LLA GNI AAL WQK+ISWFQ
Sbjct: 855 VVRRRRNLRHEARPCDSWNKRWALAVDEGDMADLSTLALEASLLEDATGDGSEAGAEEGAD--LVVKWRKAFREAVTSTGGKRDS---LVPS------------------------------------------------------------------RFSGEQKGVTEDVFLSAALKLSAACLGGIDAQLSEVSSDFSEEEGGEGEGLMVSGPAADENKQCEHARPI-YENKDHRNPTVLDASMWDAHCNTDSLSGAGVAAHPPRTGTS-----MRPEHLSEIYGIRTGPCGGIS---LKVDIRGNFEEWDLQVFPPLEDFVRRAKQAQVQVLTTLARVPCILEHPDVKPYQTMVEGYGLGFELPQGGDEDIASERENTSTSWEDTG--GRSVAETTERMEQL-AEGPMDECDWLQNLSEDPYYRGLQDKVTAVFLSLASSHNSVYRMVNGFRPLLQEFQGTS-----------------DPDAIAADVIASAKRTGSR---AGSLDLSP----VLLAKPTTEWLHSWYSRFERFRQTVRATQIDSPQALLSINATDLIAYLVALPEKCLEDVRLIGPRLMLNATAILGAVFRRCNAILSGGLQGVDAIGEKAVFLCQIGQWLWQLRDEVQKLQELGVLLKKIGCFDAWPSPRLAAKTGSGPVPANGDGSSMPRSPPL-----VVTARKPAGITAFSPTKTSRGDGNGKDATPTN------GVAGSEQQTGPXXXXXGKNNDSRGPAGKTCGFFDDR------GGYDFRAVENQTREATENVGFHLVVLQRSVDQAHINMRIASQEFSSLLRKVLSSSESALESLSRDIDRLEADILDPALSNASTDPTKACSRLEGYRQRLADLQEDQSRYHHYSGFLDKDVVRTLAKGGA----------KNQFEEENMRLVLERVGAERRQLVLKWEAQRTAVHIRQEWESSALIFCDADVMASQLSRAVRAHAFAVETARGADEVSASCEATLAHLGRVVEAVGFLHNRDLTAAYWERVEQAMPLREDLKRAARKEFMPALRHAAGLEKGPPADINDNNGESFNQAEPPSAEV-GE--NTAFEKTEVVDSVDPAATDLTDSVTGPSSSGTAK-VFSSVATRVIPPKFDAG------GKLRVSKAAAVVSSAAGRERRGDARRRAEVYEVFPMAAEWGGLSLATLLNHGLLEKIKYLECPGKPYAPRPLARNTISSMTCPPTDPHQELESVWEAAPMIFLWRFNEGAPAPGITKQSPTVDSDSLRRRRLYSRVLAEPALVQQGYSTGTIAGGVGXXXXXXASDLPASEGFTSLLSNGDELLRLAEHCRLVVDSIVDAPSPLLAVGNIGQAALEWQKRISWFQ 2066
BLAST of mRNA_H-paniculata_contig382.10014.1 vs. uniprot
Match: A0A835YHS2_9STRA (DHC_N2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHS2_9STRA) HSP 1 Score: 264 bits (675), Expect = 2.160e-66 Identity = 454/1768 (25.68%), Postives = 637/1768 (36.03%), Query Frame = 3
Query: 6087 MELHEVFPMAAEWGGLTLATLLNHGVLEKR--ENIKAISAEATASALLRQTLEELECSWQGTTMQFNWYFNEHLPSPGNTKQQPVVDADSLNKRRLYARVLAEPPLVTSGYTASNIAGAGGEKASRDAPASEGFTALLSNGDELLRLAEHCRV--------------------VIDNVVDAPAALLAAGNIHDAALGWQKKISWFQELITQWMAVQEQWVRLAPAFVPD--DLEDGAPSNDRIRFTELSGGFQSLLGTMRTENRLDILAEK-------------------------------------QQEAEIEGRGRSLLAKVRKMQEDLEGISHTMDKWLNSCASLCPRLLALPSHQLFRFSRDWAAGRVGSGSAAGETNERMALMFRGVGEIIWE---------KIVRTRGNSIGSVQ-MAAAGVCSSGAGLETVNF----------------------------------------PSPIT--AKGRLELWVRDLDRQIVSSIVRDVDTTVKVL----GGRVRGGGTIGEGGSGASVKSENPGISHLHSRGTSDSSKPNTGTTATTQNRGNPDKGGGNGPKIDGEAEDI-----PR------------PCVQGHLLARSVHWTRLVEAALIQGISLLASTNGVVDNPCESESRLQGVLSALLLYLDGWVGELRQPGSISLYSSITNTALITQAVQQRDVVEELLKVFSPSFALTSTASSDIRGKTTVATGRADAAGVTDSARAHDGDTAFISSSSVPLSSSFPARGLMSRTALSSAAEEDAVSADGFPFTWTCHLRHYHVPVAEALLTESAGGREESTRKYCEIEGSDNRRYRRNDEDTGNMPXXXXLLTVGLGTWKIPYGFEYAGTLERLWLSPLSERCLLHAAQSA--TGHFGGLLLSSCGQHPSQNPATRNGLASLSPTSICRSSYPNEDTMGITTVALDLSLAYGRAFRLLPGSCVTSPQAVSNVLASTLMAGGIAAFPGINELPKVSLAVLSESLRAVLLCLHAGQDRVLINGE-EVPLSQKPHLHPE-------YDPLLHQWRLLPSAGT-------VETTEGNSGGGAGGLFIGVFATLSRQQGFPIAELPLSIRAAFRPVLTSPPNVLVLLEAMLLTNGFSGAKCLVQGVVQGLRELMKSIIGEIDQASFRTKDTETTVHDGGVLRVMLQSRDLPAAQEETQQAISEVDTMANLHMVVRRAVRTATELVGPETAKELRAARRKLGLHSLTISERKAKVDILSRSVEARVVIAGFVRAFIAFEQGDAEMLFGAKNGVARAGDAGSGQIDSRRAEMVAIFEGTEAFREMLKPLVELESAGRRLAQQNAKARASELA-----------------------------------------------ESGTAHRSRDMAEFKAMVKRALIVNGMSPTKDQVKAGTELWEALWSCRSSVVVVTGAAGVGKSAIIHAMTKMSSYVELLNSKLNKALKKKQTEKENAADRKEGPAIGVLRGSQRPTSDEQPCASRLDPPGAIFEPPANARGAAP-----YRRIVNRQVSFIEYV--------NLTSTYRGGSKCKASG-SGGTVASSXXXXXXXXXXXXXXXXXXTSNDSDGGASVFSQRSALSKGAGSCAGGASVMSFGSSKISVGSGARGMPCTTVEGSAFVVPAHEVEVVYTGACRVDQLMGSTDERGVWHDGLLLRRLRVLVEGNRDGLACDIGGYRHRVVGAGTGDVCPLPTGAATSGFSHGCRSRLLVLDGPVFRCLE 10754
+E+ E PMAA WG L L LL+ G+ ++ + ISAEATAS ++ +TL EL+ W M+F W F E G D+ + YA+ L LLSNG LL L + V + VV AP ALLA NI A W+ + WF ++ QW A Q Q VRL+P F D G + +R RF E+ G F+ LL QQE R+LL K+ K++EDL+ + + +W+ A CPRLLALP+H LF+ R WA G V G G + ++ L+F GVGE+I+ +++ RG S AGVCSSGAGLE++ F S ++ +E W+ +++V+ + + T+ L G + G GE PR C+Q LLA H+T EAAL+ +P S L L L L G G S + A R ++EE L+ A AS D + SA AH L + G+ S +S D SA W CHLR+Y L +A X L +G W + YG+EY GT ERLW++PL+ER LLHAA SA G GGLL + G D + A D + A+GR +L S +TSP AV+ +L + G + + L ++ VL ESL + L AG V++ EVPL+ P HP Y P L QWRL + G V T G GG A L G A+ S A LPL++R +FRPV P+V LL A+L +G A L ++ G+R +++++ G Q +S +D ++ V RR R ++ E + L A RKLGL +L +E++ + L + EARV+ A +++ + G A GA A ++ +VA + A PL ++E G+ ++ A +A +S T ++D A A+++ AL G+ P +QV+A +WE+LWSCR+ V++ G GVGKSA++H++ M+ YV N A++ + +K AA A P YR + NR V FI Y S ++ A+G SG + AS XXXXXXXXXXXXXXXXXX R + + +K GS G+P +E SAF VPA VEV+YTG C L+G++DE G+W DGLL RRLR +G D + G R GAA SRL+VLDGP+ R LE
Sbjct: 1802 LEVAETHPMAATWGLLPLGVLLDEGLSDEAVVARVAQISAEATASGVMARTLAELDSIWMNAPMRFEWRFREDGLELGG---------DAAHGSGGYAQELQ----------------------------------LLSNGRALLSLVDRSSAXXXXXXXXXXXXXXXXXXXAVANAVVGAPQALLATANIAVRATRWRADLQWFHAVLLQWEAAQAQLVRLSPLFFGPFGDARAGLAA-ERGRFLEVGGRFKRLLVEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQACCHVAPLALQQEG-----SRNLLGKLSKVREDLDACARSAQRWMEFKAVTCPRLLALPAHDLFQLHRSWAQGVVQLGGGGGALDTQVNLLFPGVGELIYRACDDAVLRARLLEARGLSHAQASTQQTAGVCSSGAGLESLLFGVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFESAVSNSVTDGVEAWLDATQQRVVACMRTCLAATLSKLRDGSGWPAKPTGLEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPRVHRLRRRAAEQSACLQASLLAHHAHFTSAAEAALL--------------SPEPS-------LRPLGLGLGGGRPSFSSGGKPSPGGA---------AAALRGLLEETLEHVEGWAATCHDASLDAAQYPLL------------SACAHATQALHFRDVLQDLCA-----GIDSGAIDTSGRSSDPRSAP----RWQCHLRYY-------LNERAAPAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPYLVASIGPWSVAYGWEYHGTAERLWIAPLAERALLHAAHSARRAGGCGGLLTAPAG-----------------------------DAQSLCAPAWDAAAAFGRGMAVLSASSITSPHAVAALLRRVVAGGCVGLVTRADALSALARGVLVESLHVLRQALLAGHASVVLGAAAEVPLACAPQ-HPAVTAVTGGYMPELTQWRLAAAPGARPAFALPVFATLG--GGSAAALSSG--ASSSWLGDGAAAPLPLALRVSFRPVAVVEPSVGTLLTALLHAHGCRYAVPLAAPLLGGVRAMLRAVRGXXXXXXXXXXXXXXXXXXRA-------------------QLLSAMDDPSSRQAVFRRCARLCASVLAREKGRALTTADRKLGLSTLPRAEKRQLAEGLLAASEARVLAAAMLKSLLEVINGMASSGAGAXXXXXXTAAATPLCVNWIGGCLVAPLQAAMA------PLQDMEKVGKMRSRLPAHMQAQXXXXXXXXXXXXXXXXDAARTTAGPGEDLLAIFDSGGSXXXXXXXXXXXXKSSTTAANKDEAVVMALLRSALSAGGLVPAPEQVRAAVAVWESLWSCRAPAVILCGPPGVGKSAVLHSLAHMARYVSN-NMARRLAVEVDRIQKAKAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPVTSLPYRTLGNRTVPFIAYAAHCNRLKKQRRSARGADAQSVATGKSGNSRASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKSTT-----------------AKARDGSARSGLPQVMME-SAFAVPAQRVEVLYTGGCEPHLLLGTSDETGLWCDGLLTRRLRAAAQGFGDLYSAH--GRR----------------GAAHEPPPGERPSRLVVLDGPLSRALE 3366
BLAST of mRNA_H-paniculata_contig382.10014.1 vs. uniprot
Match: D8LEQ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEQ2_ECTSI) HSP 1 Score: 140 bits (353), Expect = 1.760e-30 Identity = 166/555 (29.91%), Postives = 244/555 (43.96%), Query Frame = 1
Query: 220 PQRPATSTSHGLRAETSRFLENPPCS-----RSVSAPPAISGAGRQDRRTSQRCGTGGSFEAV----VHEHDRTLLLLPVSPDTNDGFKTPLPPSKDSKRRGQSCSEGRARLIR--DTSL---EDKIFQKHQEQYGVVIDGEKIEVDSFP-----KSAPKAD-DLISQAGHQDDVDTMSNDANAFVSSCQSPFDQGRAARVMLSSTIALSPRGRCKTPTLPTD-----RHHSPNDECNHLYS----PRRTRADGNGKKAQRWPMTP---GTPLVDYWLYSEF--GRRAESEEHTALLDNLWGSGSGYVIDTSSSSVVATPS-RRLIFGADEIAGDREIEFFIAEVLASNTTAAVEATLETAAADACTSMQHGAQTKGSITNIKSPTPV-WLSVTLRAVPWHAGDPQRRYNPYHLRIIGRELSHHGSGATDIGEDLRDSP----ENAVGSNHE--LGFERPAVPGHMGVCYGDGDCHGGRNKEKWTPGFEREGSKIDGKGERHAGESATELEIATFSARGVTYVDLHGETSFFTLEEWCLEKRRFDAMSRMKFCSR 1758
P+RP T++ +A + L + S +S SAPP AG +D + +E + + H R+ L P+ P PL P+ + +R S S+ R +R +TS E QE YG V+ E+ +D K A AD +L++ + D + CQS Q R A V+LSST+ LSPRGR +T T T R S ++E + YS P T+ G + P T W S+ G+ S++ LL+ LWG GS V +A + R +FG DE AGDREI F+A A + +T G+ ++ + P + +++L AVP HA DP RRYNPYHLRI+ RE+ G G+DL P E + S++E G P V C G+ +++ +PG G E+ + ++E A + GVTYV++HGET+F +L +W EK RFD +SRM+F R
Sbjct: 5 PRRPGTASDQRHQAGKPQLLRDSTYSGGRRIKSSSAPPTA--AGTRDANAGESIDHQDDYEVLPTAGLEIHCRSETLGPLQPSQI----YPLRPTVEKERTPLSYSDVGQRTLRRRETSSPTGEGNQEADDQEDYGRVVRCEEPRLDQGTTVVGQKGAYTADNELVTNPFFSTPQNAA--DYHPAEGDCQSAGRQDRGATVVLSSTVLLSPRGRARTSTPSTAFAAEWRAVSQDNEADWAYSLSPRPHTTQDSYFGGGSWHDPPTAYSSNARCEQRWAPSDAKSGQHGTSKDPADLLEILWGQGS--VSAAHGRHGLANDNLARTLFGKDEFAGDREIACFLASAAAXXXXXXXXXXXXXXXXXXXANFP-AQETGGTHSSQRPPLLIPKATISLVAVPIHADDPSRRYNPYHLRIVSREVD--GGLGAGRGDDLEGMPDDDGETSGNSSNEDSTGETLPRV--QKASCPPQGNRRRRSAEQRGSPGTAL------GLEEKQGQDDCRDIERAYICSDGVTYVNVHGETTFQSLNQWSKEKERFDTLSRMRFVRR 538
BLAST of mRNA_H-paniculata_contig382.10014.1 vs. uniprot
Match: A0A6P8HXR8_ACTTE (dynein beta chain, ciliary-like n=2 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HXR8_ACTTE) HSP 1 Score: 65.5 bits (158), Expect = 3.170e-6 Identity = 83/342 (24.27%), Postives = 130/342 (38.01%), Query Frame = 3
Query: 8277 YGFEYAGTLERLWLSPLSERCLLHAAQSATGHFGGLL--LSSCGQHPSQNPATRNGLASLSPTSICRSSYPNEDTMGITTVALDLSLAYGRAFRLLPGSCVTSPQAVSNVLASTLMAGGIAAFPGINELPKVSLAVLSESLRAVLLCLHAGQDRVLINGEEVPLSQKPHL-----------HPEYDPLLHQWRLLPSAGTVETTEGNSGGGAGGLFIGVFATLSRQQGFPIAELPLSIRAAFRPVLTSPPNVLVLLEAMLLTNGFSGAKCLVQGVVQGLRELMKSIIGEIDQASFRTKDTETTVHDGGVLRVMLQSRDLPAAQEETQQ--AISEVDTMANLH 9257
YGFEY GT+ RL +SPL+++CL+ A++ + GL + CG+ T +LSL G S + + ++ +G F I+ + V ++L++ L+ + LHA + V+I EEVPL +P+Y +PS IG F + +ELP I FRPV P+ LV+LE + + GF+ A + +V LREL ++ + T D VH ++ R L A Q S+V+TM N+H
Sbjct: 2110 YGFEYQGTVSRLAISPLTDKCLVGLAKAVKANAVGLCTGIPGCGK---------------------------------TETVKELSLIAGYPLYSFNSSKSLTRGMLVDIFRGVASSGSWVCFNNISSITPVVXSILTQLLQVIHDGLHANKATVIIQXEEVPLMADAACFATLTNSISIXYPDY---------IPS-------------------IGFFPSFQSST----SELPKDILNLFRPVALMGPDWLVILEVWITSQGFTKASXISSKIVS-LRELCLELLPSTSK--ILTGDASRCVHKCSSWGLLSLKRILIRAGTHLYQYQQESQVNTMNNVH 2383 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig382.10014.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig382.10014.1 >prot_H-paniculata_contig382.10014.1 ID=prot_H-paniculata_contig382.10014.1|Name=mRNA_H-paniculata_contig382.10014.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=2678bp MIASRAMLRHEARVQPAGNHRWALPIDEEEMGELYTLALETSALDGTGVDback to top mRNA from alignment at H-paniculata_contig382:8529..39013+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig382.10014.1 ID=mRNA_H-paniculata_contig382.10014.1|Name=mRNA_H-paniculata_contig382.10014.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=30485bp|location=Sequence derived from alignment at H-paniculata_contig382:8529..39013+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig382:8529..39013+ >mRNA_H-paniculata_contig382.10014.1 ID=mRNA_H-paniculata_contig382.10014.1|Name=mRNA_H-paniculata_contig382.10014.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=16068bp|location=Sequence derived from alignment at H-paniculata_contig382:8529..39013+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |