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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal peptide |
| Exons | 5 |
| Model size | 969 |
| Cds size | 765 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3802.9973.1 >prot_H-paniculata_contig3802.9973.1 ID=prot_H-paniculata_contig3802.9973.1|Name=mRNA_H-paniculata_contig3802.9973.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=255bp
MLLLRILALLCAMAYPMVVKGEGTSIADHGSVCDGILLPEYRNSAPVNLW
YDNGIRCNAPKIVRFMGKGEVTIFGIDPVYENVHFVVGPRATVVFVGRTI
LFERGEGSTEPIFIVKGNGVLSFDMDGSRDIKKKGRVVDKSALVKKSPRG
SFVLTNGAQIYCTDTFLSVQRSRPPHGTEAGGLVGDSTAHAELLDVSATT
ATSSSPREDMATTAANEQDSTSTVTVRTPTLDVSAMAKEAIARPPRIKLG
PRDAP back to topmRNA from alignment at H-paniculata_contig3802:2401..5384- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig3802.9973.1 ID=mRNA_H-paniculata_contig3802.9973.1|Name=mRNA_H-paniculata_contig3802.9973.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2984bp|location=Sequence derived from alignment at H-paniculata_contig3802:2401..5384- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCAAGAGCCAAGATCGTGCGTACATGTTTACTTGCTCTTACGTAGCGTAC
CAGCGATGATGTCTTTCTTCACCTCCTGGTCTCTTGTGCGTTACTTCTCG
CGTGAAGTCGTGACACCCTATGATCACTCTCTTCTGAACAACAACTCTGC
TCCTCCCTCGAGAACTGGCTTGAATATTTTTTGAGAAAATCGACGTAGAG
AAAGATGCTATTGCTGAGGATCTTGGCGCTGCTTTGCGCCATGGCGTATC
CTATGGTCGTAAAAGGGGAGGGCACATCTATTGCCGACCATGGAAGCGTC
TGTGATGGAATACTGCTGCCTGAGTACCGCAATTCAGCGCCCGTAAACCT
ATGGTACGACAATGGCATTCGCTGCAATGCGCCGAAGGTACGGGTTTCAG
CGTGTCCCCGAATACACAATAGTACAGTACAGTGCAGTCTGTAGGCACAT
AGATCTCGCAGTTATCCGCATTACTGACAGCACAAGAGAGTGCACGATGC
AGCAGTAGGCAGGTCATGGTGACGTGTTCTTTTCTCTGGCATGCGCTGGC
CTGTAATTATGCATTGGATCGCGTGAGTGTGGTTTCGTTGAGAGTGTTTT
CTGGAACGATTTTCTACGCGTTTCGGTGTAGCTTATTTTCGGCACCCCAA
AGCACCACTACTTGAGAATCCTTTTCAGCACACCACTGACAGGTGATACT
GATGCTTCCCTGGCGCCGACTTTTTACCGTCACCACTCAGCACACGATCC
TTGCGCACATACTGTTCTCCTCCGATCTTGTGAAGAATGGGGGCTCAAGC
AGATGTGATGAAAGCCAGGGACGGGAAACTAGTGCGATCCGATAATGAAT
CTCCTCTGTGTGTTTTTCTCTGCCGACGAACAGATCGTCCGCTTCATGGG
CAAAGGAGAGGTTACGATCTTTGGGATAGATCCAGTCTACGAAAACGTGC
ACTTCGTGGTTGGGCCCCGGGCGACAGTCGTATTCGTCGGCCGTACAATC
CTGTTCGAGCGCGGCGAGGTCAGTTGAACGAATCCACAGTACACTTGACT
TGTAGAAGAGTGCCAAGTCGTTTTTGTTGATTGTGGCTCTAGGCCCGCTG
TGTTGTGATGTATCTCTTCGGTTGCCGTAGCCAGGCTCTCGTTCGGTGAT
GATAATGAACGTCTAGCGCGTACGCCCGTGACAAGGTATATTATGTGTTC
TGGTGGTCGCCACGGAGCTTTCTGGTTTCGTCCGTATGTGCTACGCACTT
TTATGCAAAGCGAGAAAACGGCGGTCACTCGCAGCCATGAGAGGTCGATT
TTGTTCCAAGTGTGAGCAACTGGCGTTCCAGGATTCGAGGTTGGGTTTTC
GCCCCGTTTCACCACGCGTGTCTGTGTGCGAGGCGTGATGGGACAGCGGT
GAGCTGTACTCTACGAATTTCCTGCTTTGCCCCGCTCGCTAAACTGGTTG
TGCAACACGCTCCAACGATACCATGACTGCTCGCCGCTGACTTCGAAAGC
CTACAGCGTAGTAGTGGTGGATACAGGAAACAATCGAATCGCCGTGGTAT
TTTTGCTCCCGTTCCAGGACGCCGAAGTTGGCTAGGTGTGTCCTCTCACT
TCCCCGCCTGCCCCACAACGTTTCTGTGCTACTACATGTGATACAGGGGT
CAACCGAGCCGATATTCATCGTAAAAGGTAACGGTGTTCTATCTTTCGAT
ATGGATGGAAGCCGCGACATCAAGAAGAAAGGCAGAGTGGTGAGAAAACA
CGGTAGTTGATGTGTTTCCGAATTGGTCCCATGTCGTGTGTTGTGCGAGA
ATGAGGAATTTTTCGTTTCGTCGTTTCGAGATTAATGAAAAATATCCTCC
TGCATTCCCCCCCGTGAGAGAGGTTTTGTCAACGGCTTGGATTTTGGTGG
ATATGACGAAGAACCCTTGTGGTGCACTGGTCGTACTAGTTGACTGATTC
GTTGTGAAGTACGACATATTGCCGTGCTGTAGCATGTGTTGAGTGAGGGT
GGGTGTTGCTGGTAGCGTCCATTTATTTGTGTCGATATACTGGCGATCGG
CTGTTCGCCACCGTGGCACTTTTGTGTTGCATGTGATGGGAGTTTCGGCT
TAGAGCTGGCTGATGAATTGCAACAGTATCTCCGCATACACGTGCATTGG
GCATATCATGGCAAATAGCTGCTGTATTCCAGTCTGGAGTCGCCCCAATG
CTAACCCGCACCGTCCCTCTTCTTACCGCTCTGTTCCGTTCCGTTCCATC
GCGACCTTACTGTTGCCTCAGGTAGACAAAAGCGCTCTGGTGAAGAAGTC
GCCGAGAGGCTCCTTTGTCTTAACGAACGGAGCCCAAATATACTGCACGG
ATACCTTCCTATCCGTGCAACGCTCACGGCCGCCGCACGGCACTGAAGCA
GGTGGCCTCGTTGGGGACAGCACGGCTCATGCGGAGCTGTTGGACGTTAG
TGCAACCACGGCTACGTCTTCCTCACCACGTGAGGACATGGCCACGACTG
CCGCCAACGAGCAAGACTCAACAAGTACTGTCACCGTCCGGACCCCCACG
TTGGACGTCAGTGCCATGGCGAAGGTGATGGACTCGGTTTCTCCGATGGT
TGAAGAAGCGACGTCCACGACTGATGCCACCCGCCAACTAATGGCAGCGT
TGTATACTAAATAATAGTAGAGTCGAAGCTGCAGTAGCTATGCTCGTGCA
TTCCGCGTTTTGTTCTCGACCCACGTACGTCTCACCGCTAAGCTTGCATG
TAGGCACACTGCCCATCCATCAACCTCATGGAGGTCAGATGGGTGAGGAC
CAGAACAACACCATTTCATCTTGTAGAAACACCAGGCATGGGAAGATTTG
GAAGATGTACCTCGCAGTTCCGATGTATCGCGCGTCACCCGAACTGTGTG
GTTCTAATTATTTTTCATTTACACCACTGACAGGAAGCTATCGCTCGCCC
GCCGAGGATCAAGCTCGGTCCTCGCGACGCTCCG back to topCoding sequence (CDS) from alignment at H-paniculata_contig3802:2401..5384- >mRNA_H-paniculata_contig3802.9973.1 ID=mRNA_H-paniculata_contig3802.9973.1|Name=mRNA_H-paniculata_contig3802.9973.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1530bp|location=Sequence derived from alignment at H-paniculata_contig3802:2401..5384- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTATTGCTGAGGATCTTGGCGCTGCTTTGCGCCATGGCGTATCCTAT
GGTCGTAAAAGGGGAGGGCACATCTATTGCCGACCATGGAAGCGTCTGTG
ATGGAATACTGCTGCCTGAGTACCGCAATTCAGCGCCCGTAAACCTATGG
TACGACAATGGCATTCGCTGCAATGCGCCGAAGATGCTATTGCTGAGGAT
CTTGGCGCTGCTTTGCGCCATGGCGTATCCTATGGTCGTAAAAGGGGAGG
GCACATCTATTGCCGACCATGGAAGCGTCTGTGATGGAATACTGCTGCCT
GAGTACCGCAATTCAGCGCCCGTAAACCTATGGTACGACAATGGCATTCG
CTGCAATGCGCCGAAGATCGTCCGCTTCATGGGCAAAGGAGAGGTTACGA
TCTTTGGGATAGATCCAGTCTACGAAAACGTGCACTTCGTGGTTGGGCCC
CGGGCGACAGTCGTATTCGTCGGCCGTACAATCCTGTTCGAGCGCGGCGA
GATCGTCCGCTTCATGGGCAAAGGAGAGGTTACGATCTTTGGGATAGATC
CAGTCTACGAAAACGTGCACTTCGTGGTTGGGCCCCGGGCGACAGTCGTA
TTCGTCGGCCGTACAATCCTGTTCGAGCGCGGCGAGGGGTCAACCGAGCC
GATATTCATCGTAAAAGGTAACGGTGTTCTATCTTTCGATATGGATGGAA
GCCGCGACATCAAGAAGAAAGGCAGAGTGGGGTCAACCGAGCCGATATTC
ATCGTAAAAGGTAACGGTGTTCTATCTTTCGATATGGATGGAAGCCGCGA
CATCAAGAAGAAAGGCAGAGTGGTAGACAAAAGCGCTCTGGTGAAGAAGT
CGCCGAGAGGCTCCTTTGTCTTAACGAACGGAGCCCAAATATACTGCACG
GATACCTTCCTATCCGTGCAACGCTCACGGCCGCCGCACGGCACTGAAGC
AGGTGGCCTCGTTGGGGACAGCACGGCTCATGCGGAGCTGTTGGACGTTA
GTGCAACCACGGCTACGTCTTCCTCACCACGTGAGGACATGGCCACGACT
GCCGCCAACGAGCAAGACTCAACAAGTACTGTCACCGTCCGGACCCCCAC
GTTGGACGTCAGTGCCATGGCGAAGGTAGACAAAAGCGCTCTGGTGAAGA
AGTCGCCGAGAGGCTCCTTTGTCTTAACGAACGGAGCCCAAATATACTGC
ACGGATACCTTCCTATCCGTGCAACGCTCACGGCCGCCGCACGGCACTGA
AGCAGGTGGCCTCGTTGGGGACAGCACGGCTCATGCGGAGCTGTTGGACG
TTAGTGCAACCACGGCTACGTCTTCCTCACCACGTGAGGACATGGCCACG
ACTGCCGCCAACGAGCAAGACTCAACAAGTACTGTCACCGTCCGGACCCC
CACGTTGGACGTCAGTGCCATGGCGAAGGAAGCTATCGCTCGCCCGCCGA
GGATCAAGCTCGGTCCTCGCGACGCTCCGGAAGCTATCGCTCGCCCGCCG
AGGATCAAGCTCGGTCCTCGCGACGCTCCG back to top
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