mRNA_H-paniculata_contig3761.9886.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3761.9886.1
Unique NamemRNA_H-paniculata_contig3761.9886.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig3761.9886.1 vs. uniprot
Match: A0A146H7K8_MYCCL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146H7K8_MYCCL)

HSP 1 Score: 151 bits (381), Expect = 4.810e-40
Identity = 88/236 (37.29%), Postives = 134/236 (56.78%), Query Frame = 1
Query:    1 LYGLKQSGRNWNNIRDDFLVGIGLDRSTTDLCLYFSRDDGGEADLLVAVYVDDLVI-AGRCEKVDEFKHNISQRFRMKDLGSLLRVLEIEVRRDRPKCTITISQGSYIREVLKRYGFEECRGVPTPV--EGKLKI-SAPESADKPSEPKSLGARGMVGSLTYAPTGTRPDVAYAVHQAARPMEEPCREDFSTCKRIFRYLSTVPDLGIKFGRKSNNGHSLEGFVGADWAENVEDRK 696
            +YGL QSGR+WN   D  +  +GL ++  D C+Y+   DG +  + V V+VDDL+I A   ++ +  +  +   F MKD+G   +++ IEV RDR   T+T+SQ  YI  +L RYGF     V TP+  +   K+   P+ A   +       + M+G L YA   TRPD+AYAV + ++    P  E  + CKR+FRYLS   + G+ +G +  +G   EG+  AD+A N++DRK
Sbjct:   38 IYGLHQSGRDWNREFDRKVQSVGLTKTAADNCVYYRERDGEQ--VWVTVWVDDLIILATSKDEGERVRKELGTLFEMKDMGEPRKIIGIEVTRDRSAGTVTLSQRHYIESLLDRYGFSNLNAVSTPLVPDANTKMRQLPKDAPPAAPSVRAEYQSMIGGLMYAAICTRPDIAYAVGRLSQFAANPGPEHQAACKRVFRYLSGTRNYGLVYGPQ-RDGVVFEGYCDADYAANLDDRK 270          
BLAST of mRNA_H-paniculata_contig3761.9886.1 vs. uniprot
Match: A0A409WVI7_9AGAR (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Panaeolus cyanescens TaxID=181874 RepID=A0A409WVI7_9AGAR)

HSP 1 Score: 156 bits (394), Expect = 5.690e-40
Identity = 98/240 (40.83%), Postives = 134/240 (55.83%), Query Frame = 1
Query:    1 LYGLKQSGRNWNNIRDDFLVGIGLDRSTTDLCLYFSRDDGGEADLLVAVYVDDLVIAGRCEK-VDEFKHNISQRFRMKDLGSLLRVLEIEVRRDRPKCTITISQGSYIREVLKRYGFEECRGVPTPVEGKLKISA--PESADKPSEP----KSLGARGMVGSLTYAPTGTRPDVAYAVHQAARPMEEPCREDFSTCKRIFRYLSTVPDLGIKF-GRKSNNGHSLEGFVGADWAENVEDRK 696
            LYGLKQ+GR WN   D  L  +G  R   + CLY  R +GG+   LV VYVDDL++A      +DE K  ++  F+M+DLG    VL I++RRDR K  I +SQ  YI  VLKR G E+C+ V TP+  + +++A  P + D  +E     K++    +VGSL YA  GTRPD+AYA     R    P R  +   KR+ RYL    DL ++F G   +   S  G+  ADW+ + E  K
Sbjct: 1150 LYGLKQAGRTWNKTFDSSLKDLGFTRLDAETCLYVMRGEGGKLCFLV-VYVDDLILAATSRAYMDEIKTKLAATFKMRDLGPASYVLGIQIRRDRRKRIIGLSQRQYIDTVLKRCGMEDCKPVFTPLSTQNRLTADDPINNDTLTEMTINNKTVSYATVVGSLMYAMMGTRPDIAYATGLLGRFSTNPKRCHWEAAKRVLRYLKGTRDLELQFDGNDVSMDMSFHGYSDADWSGDPETSK 1388          
BLAST of mRNA_H-paniculata_contig3761.9886.1 vs. uniprot
Match: A0A146H3U8_MYCCL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146H3U8_MYCCL)

HSP 1 Score: 152 bits (385), Expect = 5.780e-40
Identity = 91/236 (38.56%), Postives = 132/236 (55.93%), Query Frame = 1
Query:    1 LYGLKQSGRNWNNIRDDFLVGIGLDRSTTDLCLYFSRDDGGEADLLVAVYVDDLVI-AGRCEKVDEFKHNISQRFRMKDLGSLLRVLEIEVRRDRPKCTITISQGSYIREVLKRYGFEECRGVPTPV--EGKLKISAPESADKPSEPKSLGA-RGMVGSLTYAPTGTRPDVAYAVHQAARPMEEPCREDFSTCKRIFRYLSTVPDLGIKFGRKSNNGHSLEGFVGADWAENVEDRK 696
            LYGL QSGR WN   D  +  IGL ++  D C+Y+   DG    + V V+VDDL+I A   ++ +  K  +   F MKDLG   +++ IEV RDR   T+T+SQ  YI  +L RYGF +  GV TP+  +   K+        P+ P +    + M+G L YA   TRPD+AYAV + ++    P  E  + CKR+F YLS   D G+ +G +  +    EG+  A++A N++DRK
Sbjct:  123 LYGLHQSGREWNREFDQKVQTIGLTKTAADNCVYYRERDGER--VWVTVWVDDLIILATSKDEGERVKKELDTLFEMKDLGEPRKIIGIEVTRDRSAGTVTLSQRHYIESLLDRYGFSDLNGVSTPLVPDANTKMRQLPKDAPPTAPSARAEYQSMIGGLMYAAICTRPDIAYAVGRLSQFAANPGPEHQAACKRVFHYLSGTRDYGLVYGLQ-RDAVVFEGYCDANYAANLDDRK 355          
BLAST of mRNA_H-paniculata_contig3761.9886.1 vs. uniprot
Match: A0A067T5Q4_GALM3 (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Galerina marginata (strain CBS 339.88) TaxID=685588 RepID=A0A067T5Q4_GALM3)

HSP 1 Score: 153 bits (387), Expect = 4.790e-39
Identity = 87/241 (36.10%), Postives = 135/241 (56.02%), Query Frame = 1
Query:    1 LYGLKQSGRNWNNIRDDFLVGIGLDRSTTDLCLYFSRDDGGEADLLVAVYVDDLVI-AGRCEKVDEFKHNISQRFRMKDLGSLLRVLEIEVRRDRPKCTITISQGSYIREVLKRYGFEECRGVPTPVEGKLKISAPESADKPSEPKS-----LGAR--GMVGSLTYAPTGTRPDVAYAVHQAARPMEEPCREDFSTCKRIFRYLSTVPDLGIKFGRKSNNGHSL-EGFVGADWAENVEDRK 696
            LYGLKQSGR WN   D  L  +   +S  D C+Y   ++G  +   + V+VDDL+I   + ++++E K  + + F + DLG    ++ +EV+RDR K TI++ Q SY+  +LK+YG E CR V TP++  + ++     D   EP+      LG R    VGSL YA  GTRPD+AYAV + ++    P    ++  KR+FRYL+   D  + +G   +    +   +  AD+A + +DRK
Sbjct:  875 LYGLKQSGREWNRKLDKVLTELRFSKSNVDHCVYIRTENGHTS--YITVWVDDLMIFTDKSDEMNEIKAYLKKEFEISDLGEPKLIIGLEVKRDRKKHTISLGQTSYVDRILKKYGMENCRPVSTPMDPNVVLTRVNENDVKDEPREDRDERLGGRYAAAVGSLMYAAIGTRPDIAYAVQKLSKYSSNPGNSHWTALKRVFRYLAGTRDRVLFYGGDVDEDEVIFSAYCDADFASDSDDRK 1113          
BLAST of mRNA_H-paniculata_contig3761.9886.1 vs. uniprot
Match: UPI001F03A7A8 (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F03A7A8)

HSP 1 Score: 144 bits (364), Expect = 1.060e-38
Identity = 90/233 (38.63%), Postives = 129/233 (55.36%), Query Frame = 1
Query:    1 LYGLKQSGRNWNNIRDDFLVGIGLDRSTTDLCLYFSRDDGGEADLLVAVYVDDLVIAGR-CEKVDEFKHNISQRFRMKDLGSLLRVLEIEVRRDRPKCTITISQGSYIREVLKRYGFEECRGVPTPVEGKLKISAPESADKPSEPKSLGARGMVGSLTYAPTGTRPDVAYAVHQAARPMEEPCREDFSTCKRIFRYLSTVPDLGIKFGRKSNNGHSLEGFVGADWAENVEDRK 696
            LYGLKQSGRNWNN+ D +L   G  RS +D C+Y    D     L++  +VDD++IA    E + E K  +S RF+MKDLG L   L IE   +  K  I +SQ  YI ++L ++  + C+   +P E  +  +  +S + P     L  R +VGSL Y  T TRPD+ Y+V + ++ +  P   D +T K + RYL    + G+ F RKS    SL G+  ADW  + EDR+
Sbjct:   12 LYGLKQSGRNWNNLLDSYLKSEGFSRSESDNCVYVKVTDTSVTILII--WVDDIIIASSSAECLAEVKQKLSSRFKMKDLGVLSWFLGIEFTCE--KNEIIMSQSKYIEKILAKFNMQNCKPRSSPCE--MSSNKMKSEESPLVNNKL-YREIVGSLVYVMTSTRPDLCYSVTKLSQHLSAPTASDMNTAKHVLRYLKGTSEKGLVF-RKSQQPLSLMGYCDADWGSS-EDRR 235          
BLAST of mRNA_H-paniculata_contig3761.9886.1 vs. uniprot
Match: Q45W66_PHACR (Polyprotein n=1 Tax=Phanerochaete chrysosporium (strain RP-78 / ATCC MYA-4764 / FGSC 9002) TaxID=273507 RepID=Q45W66_PHACR)

HSP 1 Score: 152 bits (384), Expect = 1.230e-38
Identity = 87/235 (37.02%), Postives = 128/235 (54.47%), Query Frame = 1
Query:    1 LYGLKQSGRNWNNIRDDFLVGIGLDRSTTDLCLYFSRDDGGEADLLVAVYVDDLVIAGRCEKV-DEFKHNISQRFRMKDLGSLLRVLEIEVRRDRPKCTITISQGSYIREVLKRYGFEECRGVPTPVEGKLKISAPESADKPSEPKSLGARGMVGSLTYAPTGTRPDVAYAVHQAARPMEEPCREDFSTCKRIFRYLSTVPDLGIKFGRKSNNGHSLE--GFVGADWAENVEDRK 696
            LYGLKQSGR WN + D+FL GIG   S+ D C+Y   D+G      +AV+VDD  +  +  ++ D+ K  +S RF M DLG + ++L  EV R+R + T+ + Q +YIR+VL R+   +   V  P++   ++     A  P  P     R  VGSL YA  GTRPD++YAV   ++  E P    ++  KR+ RYL    + GI +         +E  G+  ADW  N +D+K
Sbjct: 1020 LYGLKQSGREWNLLLDEFLRGIGFRASSVDPCVYLRIDEGSPT--FLAVHVDDFSLFAKTREIMDKLKGELSSRFEMTDLGPVRQILGYEVIRERDQRTLMLRQAAYIRKVLDRFNMADSNPVSVPMDPNTRLQKTPDAPPPDFPY----REAVGSLMYAAVGTRPDISYAVQTLSQFCERPSTAHWTALKRVLRYLKGTAEWGIIYKAPEAQTTPIEVVGYSDADWGANPDDQK 1248          
BLAST of mRNA_H-paniculata_contig3761.9886.1 vs. uniprot
Match: A0A7M6DPI8_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M6DPI8_9CNID)

HSP 1 Score: 151 bits (382), Expect = 2.250e-38
Identity = 87/237 (36.71%), Postives = 130/237 (54.85%), Query Frame = 1
Query:    1 LYGLKQSGRNWNNIRDDFLVGIGLDRSTTDLCLYFSRDDGGEAD--LLVAVYVDDLVIAGRCEKVD---EFKHNISQRFRMKDLGSLLRVLEIEVRRDRPKCTITISQGSYIREVLKRYGFEECRGVPTPVEGKLKISAPESADKPSEPKSLGARGMVGSLTYAPTGTRPDVAYAVHQAARPMEEPCREDFSTCKRIFRYLSTVPDLGIKFGRKSNNGHSLEGFVGADWAENVEDRK 696
            +YGLKQS R WN   D+FL   G  R+  D C+Y  +   G+    L+VAVYVDDL+IA  C  +    E K  + +RF M+D   +  +L ++V+RDR    +TI Q +++  VL R+   EC+ V TP+E  +K    + AD     K    +  +G LTYA  GTRPD++ AV   ++ M +P ++ +   KR+ RYL    D G+ +    +    L GF  ADWA +++ RK
Sbjct:  925 IYGLKQSARCWNEKMDEFLKESGFTRNDADPCIYHKQITKGDKSFTLIVAVYVDDLLIA--CNNIQILREQKQKLGERFEMEDKSEVHFILGMQVKRDRKNRRLTIDQNAFLSSVLNRFNMNECKPVATPLEPSMKFE--KLADDEEIVKLKDYQSAIGCLTYASIGTRPDISAAVGVLSQHMSKPGKQHWIGVKRVLRYLKGTLDYGLIYEGSESGDILLHGFADADWAGDIDTRK 1157          
BLAST of mRNA_H-paniculata_contig3761.9886.1 vs. uniprot
Match: A0A6S7HTI9_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HTI9_PARCT)

HSP 1 Score: 150 bits (380), Expect = 4.160e-38
Identity = 94/234 (40.17%), Postives = 131/234 (55.98%), Query Frame = 1
Query:    1 LYGLKQSGRNWNNIRDDFLVGIGLDRSTTDLCLYFSRDDGGEADLLVAVYVDDLVIAG-RCEKVDEFKHNISQRFRMKDLGSLLRVLEIEVRRDRPKCTITISQGSYIREVLKRYGFEECRGVPTP-VEGKLKISAPESADKPSEPKSLGARGMVGSLTYAPTGTRPDVAYAVHQAARPMEEPCREDFSTCKRIFRYLSTVPDLGIKFGRKSNNGHSLEGFVGADWAENVEDRK 696
            LYGLKQSGRNWNN+  ++L   G  +S  D C+Y    D     ++V V+VDD++IA    E +   K ++ +RF+MKDLG L   L  E +    K  I ++Q  YI +VL ++G  +C+  PTP V G  K+S  ES   PS       R +VGSL Y  TGTRPD+ Y V + ++ M +P R +    K + RYL    + G+ F RKSN    L GF  +DW  +V DR+
Sbjct:  934 LYGLKQSGRNWNNLLHEYLQKEGFTQSQADPCVYVRMIDSKRC-VIVIVWVDDIIIAASHFELLTTVKESLGERFKMKDLGKLSWFLGTEFKCK--KSCIEMNQKQYIEKVLLKFGMADCKPKPTPCVLGIEKVSDEES---PSLEDPGEYRAIVGSLIYVMTGTRPDLCYIVTKLSQKMSKPTRANLDLAKHVLRYLRGTSEQGLTF-RKSNVPLRLNGFCDSDWGASVADRR 1160          
BLAST of mRNA_H-paniculata_contig3761.9886.1 vs. uniprot
Match: UPI0010367323 (subtilisin-like protease SBT1.7 n=1 Tax=Camellia sinensis TaxID=4442 RepID=UPI0010367323)

HSP 1 Score: 150 bits (379), Expect = 5.680e-38
Identity = 85/237 (35.86%), Postives = 140/237 (59.07%), Query Frame = 1
Query:    1 LYGLKQSGRNWNNIRDDFLVGIGLDRSTTDLCLYFSRDDGGEADLLVAVYVDDLVIAGRCE-KVDEFKHNISQRFRMKDLGSLLRVLEIEVRRDRPKCTITISQGSYIREVLKRYGFE-ECRGVPTPVEGKLKISAPESADKPSEPKSLGA---RGMVGSLTYAPTGTRPDVAYAVHQAARPMEEPCREDFSTCKRIFRYLSTVPDLGIKFGRKSNNGHSLEGFVGADWAENVEDRK 696
            LYGLKQS R W    D F++     RS  D C+YF +   G   + + +YVDD++IA   + ++D+ K  +++ F MKDLG   +VL +E++RDR K T+ ++Q  Y+++VL R+G   + + V TP+    ++SA  S     E K +        VG+L YA   TRPD+++AV   +R M +P ++ +   K I RY+  + +LG+KF R +  G +LEG+V +D+A +++ R+
Sbjct:  229 LYGLKQSPRQWYKRFDRFMMETEYTRSQFDHCVYFRKLPDGSF-IYLLLYVDDMLIASTSKVEIDKLKAQLAREFEMKDLGEAKKVLGMEIKRDRKKGTVCLTQTQYLKKVLDRFGINGKTKAVSTPLAPHFRLSASLSPRTEEERKHMAQVPYANAVGALMYAMVCTRPDISHAVSMVSRYMHDPGKDHWQAVKWILRYIHGMVNLGLKFERDNRLGQNLEGYVDSDYAGDLDKRR 464          
BLAST of mRNA_H-paniculata_contig3761.9886.1 vs. uniprot
Match: A0A6S7JFG0_PARCT (Spondin domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JFG0_PARCT)

HSP 1 Score: 149 bits (377), Expect = 6.710e-38
Identity = 93/234 (39.74%), Postives = 132/234 (56.41%), Query Frame = 1
Query:    1 LYGLKQSGRNWNNIRDDFLVGIGLDRSTTDLCLYFSRDDGGEADLLVAVYVDDLVIAG-RCEKVDEFKHNISQRFRMKDLGSLLRVLEIEVRRDRPKCTITISQGSYIREVLKRYGFEECRGVPTP-VEGKLKISAPESADKPSEPKSLGARGMVGSLTYAPTGTRPDVAYAVHQAARPMEEPCREDFSTCKRIFRYLSTVPDLGIKFGRKSNNGHSLEGFVGADWAENVEDRK 696
            LYGLKQSGRNWNN+  ++L   G  +S  D C+Y    D     +++ V+VDD++IA    E +   K ++ +RF+MKDLG L   L  E +  +  C I ++Q  YI +VL ++G  +C+  PTP V G  K+S  ES   PS       R +VGSL Y  TGTRPD+ Y V + ++ M +P R +    K + RYL    + G+ F RKSN    L GF  +DW  +V DR+
Sbjct:  132 LYGLKQSGRNWNNLLHEYLQKEGFTQSQADACVYVRMIDSKRC-VIIIVWVDDIIIAASHFELLTTVKESLGERFKMKDLGKLSWFLGTEFK-CKESC-IEMNQKQYIEKVLLKFGMADCKPKPTPCVLGIEKVSDEES---PSLEDPGEYRAIVGSLIYVMTGTRPDLCYIVTKLSQKMSKPTRANVDLAKHVLRYLRGTSEQGLTF-RKSNVPLRLNGFCDSDWGASVADRR 358          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3761.9886.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A146H7K8_MYCCL4.810e-4037.29Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A409WVI7_9AGAR5.690e-4040.83Integrase catalytic domain-containing protein (Fra... [more]
A0A146H3U8_MYCCL5.780e-4038.56Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A067T5Q4_GALM34.790e-3936.10Integrase catalytic domain-containing protein (Fra... [more]
UPI001F03A7A81.060e-3838.63uncharacterized mitochondrial protein AtMg00810-li... [more]
Q45W66_PHACR1.230e-3837.02Polyprotein n=1 Tax=Phanerochaete chrysosporium (s... [more]
A0A7M6DPI8_9CNID2.250e-3836.71Uncharacterized protein n=1 Tax=Clytia hemisphaeri... [more]
A0A6S7HTI9_PARCT4.160e-3840.17Retrovirus-related Pol poly from transposon TNT 1-... [more]
UPI00103673235.680e-3835.86subtilisin-like protease SBT1.7 n=1 Tax=Camellia s... [more]
A0A6S7JFG0_PARCT6.710e-3839.74Spondin domain-containing protein n=1 Tax=Paramuri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3761contigH-paniculata_contig3761:16618..17382 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score156.0
Seed ortholog evalue2.1e-35
Seed eggNOG ortholog164328.Phyra85518
Hectar predicted targeting categoryother localisation
EggNOG free text desc.GAG-pre-integrase domain
EggNOG OGs3QH4V@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons2
Model size696
Cds size696
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930156.431354-CDS-H-paniculata_contig3761:16617..168661622930156.431354-CDS-H-paniculata_contig3761:16617..16866Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3761 16618..16866 -
1691481170.2884243-CDS-H-paniculata_contig3761:16617..168661691481170.2884243-CDS-H-paniculata_contig3761:16617..16866Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3761 16618..16866 -
1622930156.4449196-CDS-H-paniculata_contig3761:16935..173821622930156.4449196-CDS-H-paniculata_contig3761:16935..17382Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3761 16936..17382 -
1691481170.2981956-CDS-H-paniculata_contig3761:16935..173821691481170.2981956-CDS-H-paniculata_contig3761:16935..17382Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3761 16936..17382 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3761.9886.1prot_H-paniculata_contig3761.9886.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3761 16618..17382 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3761.9886.1

>prot_H-paniculata_contig3761.9886.1 ID=prot_H-paniculata_contig3761.9886.1|Name=mRNA_H-paniculata_contig3761.9886.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=232bp
LYGLKQSGRNWNNIRDDFLVGIGLDRSTTDLCLYFSRDDGGEADLLVAVY
VDDLVIAGRCEKVDEFKHNISQRFRMKDLGSLLRVLEIEVRRDRPKCTIT
ISQGSYIREVLKRYGFEECRGVPTPVEGKLKISAPESADKPSEPKSLGAR
GMVGSLTYAPTGTRPDVAYAVHQAARPMEEPCREDFSTCKRIFRYLSTVP
DLGIKFGRKSNNGHSLEGFVGADWAENVEDRK
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mRNA from alignment at H-paniculata_contig3761:16618..17382-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3761.9886.1 ID=mRNA_H-paniculata_contig3761.9886.1|Name=mRNA_H-paniculata_contig3761.9886.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=765bp|location=Sequence derived from alignment at H-paniculata_contig3761:16618..17382- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTGTACGGCCTCAAGCAGAGCGGCCGAAACTGGAATAACATTCGTGACGA TTTTCTTGTTGGGATAGGACTGGACCGTTCCACTACCGACTTATGCTTGT ACTTTTCCCGCGACGATGGAGGAGAGGCAGACCTTCTGGTGGCCGTCTAT GTTGACGACCTGGTCATTGCTGGCCGTTGTGAGAAAGTAGACGAGTTCAA GCATAACATAAGTCAGCGTTTTAGGATGAAAGACTTGGGCTCTCTCTTGC GCGTGTTGGAAATAGAAGTACGACGTGACCGCCCTAAATGTACCATAACC ATCTCGCAGGGTAGCTACATCCGCGAGGTACTAAAAAGATACGGTTTTGA AGAGTGTCGAGGAGTACCCACCCCTGTAGAAGGAAAATTGAAGATTTCGG CACCCGAGTCGGCCGACAAGCCCTCAGAACCAAAGTCACTTGGGGCTGTA CTGTCAGACATAGGCGGGGGAGTACAAGAAAGCAGCAGAGGTAGAAGTGG CAATTCAACTGAATAGAGAGGAATGGTAGGATCCCTTACGTACGCCCCGA CAGGAACTAGACCTGATGTAGCATACGCGGTACACCAAGCAGCACGTCCT ATGGAGGAACCATGTCGGGAAGACTTCAGTACATGCAAGCGCATTTTTCG TTATCTCAGTACTGTGCCTGACCTCGGCATTAAGTTCGGCCGTAAGAGTA ATAATGGTCACAGTCTGGAAGGATTCGTTGGTGCTGATTGGGCGGAAAAT GTCGAGGACCGAAAG
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Coding sequence (CDS) from alignment at H-paniculata_contig3761:16618..17382-

>mRNA_H-paniculata_contig3761.9886.1 ID=mRNA_H-paniculata_contig3761.9886.1|Name=mRNA_H-paniculata_contig3761.9886.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1392bp|location=Sequence derived from alignment at H-paniculata_contig3761:16618..17382- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTGTACGGCCTCAAGCAGAGCGGCCGAAACTGGAATAACATTCGTGACGA
TTTTCTTGTTGGGATAGGACTGGACCGTTCCACTACCGACTTATGCTTGT
ACTTTTCCCGCGACGATGGAGGAGAGGCAGACCTTCTGGTGGCCGTCTAT
GTTGACGACCTGGTCATTGCTGGCCGTTGTGAGAAAGTAGACGAGTTCAA
GCATAACATAAGTCAGCGTTTTAGGATGAAAGACTTGGGCTCTCTCTTGC
GCGTGTTGGAAATAGAAGTACGACGTGACCGCCCTAAATGTACCATAACC
ATCTCGCAGGGTAGCTACATCCGCGAGGTACTAAAAAGATACGGTTTTGA
AGAGTGTCGAGGAGTACCCACCCCTGTAGAAGGAAAATTGAAGATTTCGG
CACCCGAGTCGGCCGACAAGCCCTCAGAACCAAAGTCACTTGGGGCTCTG
TACGGCCTCAAGCAGAGCGGCCGAAACTGGAATAACATTCGTGACGATTT
TCTTGTTGGGATAGGACTGGACCGTTCCACTACCGACTTATGCTTGTACT
TTTCCCGCGACGATGGAGGAGAGGCAGACCTTCTGGTGGCCGTCTATGTT
GACGACCTGGTCATTGCTGGCCGTTGTGAGAAAGTAGACGAGTTCAAGCA
TAACATAAGTCAGCGTTTTAGGATGAAAGACTTGGGCTCTCTCTTGCGCG
TGTTGGAAATAGAAGTACGACGTGACCGCCCTAAATGTACCATAACCATC
TCGCAGGGTAGCTACATCCGCGAGGTACTAAAAAGATACGGTTTTGAAGA
GTGTCGAGGAGTACCCACCCCTGTAGAAGGAAAATTGAAGATTTCGGCAC
CCGAGTCGGCCGACAAGCCCTCAGAACCAAAGTCACTTGGGGCTAGAGGA
ATGGTAGGATCCCTTACGTACGCCCCGACAGGAACTAGACCTGATGTAGC
ATACGCGGTACACCAAGCAGCACGTCCTATGGAGGAACCATGTCGGGAAG
ACTTCAGTACATGCAAGCGCATTTTTCGTTATCTCAGTACTGTGCCTGAC
CTCGGCATTAAGTTCGGCCGTAAGAGTAATAATGGTCACAGTCTGGAAGG
ATTCGTTGGTGCTGATTGGGCGGAAAATGTCGAGGACCGAAAGAGAGGAA
TGGTAGGATCCCTTACGTACGCCCCGACAGGAACTAGACCTGATGTAGCA
TACGCGGTACACCAAGCAGCACGTCCTATGGAGGAACCATGTCGGGAAGA
CTTCAGTACATGCAAGCGCATTTTTCGTTATCTCAGTACTGTGCCTGACC
TCGGCATTAAGTTCGGCCGTAAGAGTAATAATGGTCACAGTCTGGAAGGA
TTCGTTGGTGCTGATTGGGCGGAAAATGTCGAGGACCGAAAG
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