mRNA_H-paniculata_contig3761.9886.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3761.9886.1 vs. uniprot
Match: A0A146H7K8_MYCCL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146H7K8_MYCCL) HSP 1 Score: 151 bits (381), Expect = 4.810e-40 Identity = 88/236 (37.29%), Postives = 134/236 (56.78%), Query Frame = 1
Query: 1 LYGLKQSGRNWNNIRDDFLVGIGLDRSTTDLCLYFSRDDGGEADLLVAVYVDDLVI-AGRCEKVDEFKHNISQRFRMKDLGSLLRVLEIEVRRDRPKCTITISQGSYIREVLKRYGFEECRGVPTPV--EGKLKI-SAPESADKPSEPKSLGARGMVGSLTYAPTGTRPDVAYAVHQAARPMEEPCREDFSTCKRIFRYLSTVPDLGIKFGRKSNNGHSLEGFVGADWAENVEDRK 696
+YGL QSGR+WN D + +GL ++ D C+Y+ DG + + V V+VDDL+I A ++ + + + F MKD+G +++ IEV RDR T+T+SQ YI +L RYGF V TP+ + K+ P+ A + + M+G L YA TRPD+AYAV + ++ P E + CKR+FRYLS + G+ +G + +G EG+ AD+A N++DRK
Sbjct: 38 IYGLHQSGRDWNREFDRKVQSVGLTKTAADNCVYYRERDGEQ--VWVTVWVDDLIILATSKDEGERVRKELGTLFEMKDMGEPRKIIGIEVTRDRSAGTVTLSQRHYIESLLDRYGFSNLNAVSTPLVPDANTKMRQLPKDAPPAAPSVRAEYQSMIGGLMYAAICTRPDIAYAVGRLSQFAANPGPEHQAACKRVFRYLSGTRNYGLVYGPQ-RDGVVFEGYCDADYAANLDDRK 270
BLAST of mRNA_H-paniculata_contig3761.9886.1 vs. uniprot
Match: A0A409WVI7_9AGAR (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Panaeolus cyanescens TaxID=181874 RepID=A0A409WVI7_9AGAR) HSP 1 Score: 156 bits (394), Expect = 5.690e-40 Identity = 98/240 (40.83%), Postives = 134/240 (55.83%), Query Frame = 1
Query: 1 LYGLKQSGRNWNNIRDDFLVGIGLDRSTTDLCLYFSRDDGGEADLLVAVYVDDLVIAGRCEK-VDEFKHNISQRFRMKDLGSLLRVLEIEVRRDRPKCTITISQGSYIREVLKRYGFEECRGVPTPVEGKLKISA--PESADKPSEP----KSLGARGMVGSLTYAPTGTRPDVAYAVHQAARPMEEPCREDFSTCKRIFRYLSTVPDLGIKF-GRKSNNGHSLEGFVGADWAENVEDRK 696
LYGLKQ+GR WN D L +G R + CLY R +GG+ LV VYVDDL++A +DE K ++ F+M+DLG VL I++RRDR K I +SQ YI VLKR G E+C+ V TP+ + +++A P + D +E K++ +VGSL YA GTRPD+AYA R P R + KR+ RYL DL ++F G + S G+ ADW+ + E K
Sbjct: 1150 LYGLKQAGRTWNKTFDSSLKDLGFTRLDAETCLYVMRGEGGKLCFLV-VYVDDLILAATSRAYMDEIKTKLAATFKMRDLGPASYVLGIQIRRDRRKRIIGLSQRQYIDTVLKRCGMEDCKPVFTPLSTQNRLTADDPINNDTLTEMTINNKTVSYATVVGSLMYAMMGTRPDIAYATGLLGRFSTNPKRCHWEAAKRVLRYLKGTRDLELQFDGNDVSMDMSFHGYSDADWSGDPETSK 1388
BLAST of mRNA_H-paniculata_contig3761.9886.1 vs. uniprot
Match: A0A146H3U8_MYCCL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146H3U8_MYCCL) HSP 1 Score: 152 bits (385), Expect = 5.780e-40 Identity = 91/236 (38.56%), Postives = 132/236 (55.93%), Query Frame = 1
Query: 1 LYGLKQSGRNWNNIRDDFLVGIGLDRSTTDLCLYFSRDDGGEADLLVAVYVDDLVI-AGRCEKVDEFKHNISQRFRMKDLGSLLRVLEIEVRRDRPKCTITISQGSYIREVLKRYGFEECRGVPTPV--EGKLKISAPESADKPSEPKSLGA-RGMVGSLTYAPTGTRPDVAYAVHQAARPMEEPCREDFSTCKRIFRYLSTVPDLGIKFGRKSNNGHSLEGFVGADWAENVEDRK 696
LYGL QSGR WN D + IGL ++ D C+Y+ DG + V V+VDDL+I A ++ + K + F MKDLG +++ IEV RDR T+T+SQ YI +L RYGF + GV TP+ + K+ P+ P + + M+G L YA TRPD+AYAV + ++ P E + CKR+F YLS D G+ +G + + EG+ A++A N++DRK
Sbjct: 123 LYGLHQSGREWNREFDQKVQTIGLTKTAADNCVYYRERDGER--VWVTVWVDDLIILATSKDEGERVKKELDTLFEMKDLGEPRKIIGIEVTRDRSAGTVTLSQRHYIESLLDRYGFSDLNGVSTPLVPDANTKMRQLPKDAPPTAPSARAEYQSMIGGLMYAAICTRPDIAYAVGRLSQFAANPGPEHQAACKRVFHYLSGTRDYGLVYGLQ-RDAVVFEGYCDANYAANLDDRK 355
BLAST of mRNA_H-paniculata_contig3761.9886.1 vs. uniprot
Match: A0A067T5Q4_GALM3 (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Galerina marginata (strain CBS 339.88) TaxID=685588 RepID=A0A067T5Q4_GALM3) HSP 1 Score: 153 bits (387), Expect = 4.790e-39 Identity = 87/241 (36.10%), Postives = 135/241 (56.02%), Query Frame = 1
Query: 1 LYGLKQSGRNWNNIRDDFLVGIGLDRSTTDLCLYFSRDDGGEADLLVAVYVDDLVI-AGRCEKVDEFKHNISQRFRMKDLGSLLRVLEIEVRRDRPKCTITISQGSYIREVLKRYGFEECRGVPTPVEGKLKISAPESADKPSEPKS-----LGAR--GMVGSLTYAPTGTRPDVAYAVHQAARPMEEPCREDFSTCKRIFRYLSTVPDLGIKFGRKSNNGHSL-EGFVGADWAENVEDRK 696
LYGLKQSGR WN D L + +S D C+Y ++G + + V+VDDL+I + ++++E K + + F + DLG ++ +EV+RDR K TI++ Q SY+ +LK+YG E CR V TP++ + ++ D EP+ LG R VGSL YA GTRPD+AYAV + ++ P ++ KR+FRYL+ D + +G + + + AD+A + +DRK
Sbjct: 875 LYGLKQSGREWNRKLDKVLTELRFSKSNVDHCVYIRTENGHTS--YITVWVDDLMIFTDKSDEMNEIKAYLKKEFEISDLGEPKLIIGLEVKRDRKKHTISLGQTSYVDRILKKYGMENCRPVSTPMDPNVVLTRVNENDVKDEPREDRDERLGGRYAAAVGSLMYAAIGTRPDIAYAVQKLSKYSSNPGNSHWTALKRVFRYLAGTRDRVLFYGGDVDEDEVIFSAYCDADFASDSDDRK 1113
BLAST of mRNA_H-paniculata_contig3761.9886.1 vs. uniprot
Match: UPI001F03A7A8 (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F03A7A8) HSP 1 Score: 144 bits (364), Expect = 1.060e-38 Identity = 90/233 (38.63%), Postives = 129/233 (55.36%), Query Frame = 1
Query: 1 LYGLKQSGRNWNNIRDDFLVGIGLDRSTTDLCLYFSRDDGGEADLLVAVYVDDLVIAGR-CEKVDEFKHNISQRFRMKDLGSLLRVLEIEVRRDRPKCTITISQGSYIREVLKRYGFEECRGVPTPVEGKLKISAPESADKPSEPKSLGARGMVGSLTYAPTGTRPDVAYAVHQAARPMEEPCREDFSTCKRIFRYLSTVPDLGIKFGRKSNNGHSLEGFVGADWAENVEDRK 696
LYGLKQSGRNWNN+ D +L G RS +D C+Y D L++ +VDD++IA E + E K +S RF+MKDLG L L IE + K I +SQ YI ++L ++ + C+ +P E + + +S + P L R +VGSL Y T TRPD+ Y+V + ++ + P D +T K + RYL + G+ F RKS SL G+ ADW + EDR+
Sbjct: 12 LYGLKQSGRNWNNLLDSYLKSEGFSRSESDNCVYVKVTDTSVTILII--WVDDIIIASSSAECLAEVKQKLSSRFKMKDLGVLSWFLGIEFTCE--KNEIIMSQSKYIEKILAKFNMQNCKPRSSPCE--MSSNKMKSEESPLVNNKL-YREIVGSLVYVMTSTRPDLCYSVTKLSQHLSAPTASDMNTAKHVLRYLKGTSEKGLVF-RKSQQPLSLMGYCDADWGSS-EDRR 235
BLAST of mRNA_H-paniculata_contig3761.9886.1 vs. uniprot
Match: Q45W66_PHACR (Polyprotein n=1 Tax=Phanerochaete chrysosporium (strain RP-78 / ATCC MYA-4764 / FGSC 9002) TaxID=273507 RepID=Q45W66_PHACR) HSP 1 Score: 152 bits (384), Expect = 1.230e-38 Identity = 87/235 (37.02%), Postives = 128/235 (54.47%), Query Frame = 1
Query: 1 LYGLKQSGRNWNNIRDDFLVGIGLDRSTTDLCLYFSRDDGGEADLLVAVYVDDLVIAGRCEKV-DEFKHNISQRFRMKDLGSLLRVLEIEVRRDRPKCTITISQGSYIREVLKRYGFEECRGVPTPVEGKLKISAPESADKPSEPKSLGARGMVGSLTYAPTGTRPDVAYAVHQAARPMEEPCREDFSTCKRIFRYLSTVPDLGIKFGRKSNNGHSLE--GFVGADWAENVEDRK 696
LYGLKQSGR WN + D+FL GIG S+ D C+Y D+G +AV+VDD + + ++ D+ K +S RF M DLG + ++L EV R+R + T+ + Q +YIR+VL R+ + V P++ ++ A P P R VGSL YA GTRPD++YAV ++ E P ++ KR+ RYL + GI + +E G+ ADW N +D+K
Sbjct: 1020 LYGLKQSGREWNLLLDEFLRGIGFRASSVDPCVYLRIDEGSPT--FLAVHVDDFSLFAKTREIMDKLKGELSSRFEMTDLGPVRQILGYEVIRERDQRTLMLRQAAYIRKVLDRFNMADSNPVSVPMDPNTRLQKTPDAPPPDFPY----REAVGSLMYAAVGTRPDISYAVQTLSQFCERPSTAHWTALKRVLRYLKGTAEWGIIYKAPEAQTTPIEVVGYSDADWGANPDDQK 1248
BLAST of mRNA_H-paniculata_contig3761.9886.1 vs. uniprot
Match: A0A7M6DPI8_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M6DPI8_9CNID) HSP 1 Score: 151 bits (382), Expect = 2.250e-38 Identity = 87/237 (36.71%), Postives = 130/237 (54.85%), Query Frame = 1
Query: 1 LYGLKQSGRNWNNIRDDFLVGIGLDRSTTDLCLYFSRDDGGEAD--LLVAVYVDDLVIAGRCEKVD---EFKHNISQRFRMKDLGSLLRVLEIEVRRDRPKCTITISQGSYIREVLKRYGFEECRGVPTPVEGKLKISAPESADKPSEPKSLGARGMVGSLTYAPTGTRPDVAYAVHQAARPMEEPCREDFSTCKRIFRYLSTVPDLGIKFGRKSNNGHSLEGFVGADWAENVEDRK 696
+YGLKQS R WN D+FL G R+ D C+Y + G+ L+VAVYVDDL+IA C + E K + +RF M+D + +L ++V+RDR +TI Q +++ VL R+ EC+ V TP+E +K + AD K + +G LTYA GTRPD++ AV ++ M +P ++ + KR+ RYL D G+ + + L GF ADWA +++ RK
Sbjct: 925 IYGLKQSARCWNEKMDEFLKESGFTRNDADPCIYHKQITKGDKSFTLIVAVYVDDLLIA--CNNIQILREQKQKLGERFEMEDKSEVHFILGMQVKRDRKNRRLTIDQNAFLSSVLNRFNMNECKPVATPLEPSMKFE--KLADDEEIVKLKDYQSAIGCLTYASIGTRPDISAAVGVLSQHMSKPGKQHWIGVKRVLRYLKGTLDYGLIYEGSESGDILLHGFADADWAGDIDTRK 1157
BLAST of mRNA_H-paniculata_contig3761.9886.1 vs. uniprot
Match: A0A6S7HTI9_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HTI9_PARCT) HSP 1 Score: 150 bits (380), Expect = 4.160e-38 Identity = 94/234 (40.17%), Postives = 131/234 (55.98%), Query Frame = 1
Query: 1 LYGLKQSGRNWNNIRDDFLVGIGLDRSTTDLCLYFSRDDGGEADLLVAVYVDDLVIAG-RCEKVDEFKHNISQRFRMKDLGSLLRVLEIEVRRDRPKCTITISQGSYIREVLKRYGFEECRGVPTP-VEGKLKISAPESADKPSEPKSLGARGMVGSLTYAPTGTRPDVAYAVHQAARPMEEPCREDFSTCKRIFRYLSTVPDLGIKFGRKSNNGHSLEGFVGADWAENVEDRK 696
LYGLKQSGRNWNN+ ++L G +S D C+Y D ++V V+VDD++IA E + K ++ +RF+MKDLG L L E + K I ++Q YI +VL ++G +C+ PTP V G K+S ES PS R +VGSL Y TGTRPD+ Y V + ++ M +P R + K + RYL + G+ F RKSN L GF +DW +V DR+
Sbjct: 934 LYGLKQSGRNWNNLLHEYLQKEGFTQSQADPCVYVRMIDSKRC-VIVIVWVDDIIIAASHFELLTTVKESLGERFKMKDLGKLSWFLGTEFKCK--KSCIEMNQKQYIEKVLLKFGMADCKPKPTPCVLGIEKVSDEES---PSLEDPGEYRAIVGSLIYVMTGTRPDLCYIVTKLSQKMSKPTRANLDLAKHVLRYLRGTSEQGLTF-RKSNVPLRLNGFCDSDWGASVADRR 1160
BLAST of mRNA_H-paniculata_contig3761.9886.1 vs. uniprot
Match: UPI0010367323 (subtilisin-like protease SBT1.7 n=1 Tax=Camellia sinensis TaxID=4442 RepID=UPI0010367323) HSP 1 Score: 150 bits (379), Expect = 5.680e-38 Identity = 85/237 (35.86%), Postives = 140/237 (59.07%), Query Frame = 1
Query: 1 LYGLKQSGRNWNNIRDDFLVGIGLDRSTTDLCLYFSRDDGGEADLLVAVYVDDLVIAGRCE-KVDEFKHNISQRFRMKDLGSLLRVLEIEVRRDRPKCTITISQGSYIREVLKRYGFE-ECRGVPTPVEGKLKISAPESADKPSEPKSLGA---RGMVGSLTYAPTGTRPDVAYAVHQAARPMEEPCREDFSTCKRIFRYLSTVPDLGIKFGRKSNNGHSLEGFVGADWAENVEDRK 696
LYGLKQS R W D F++ RS D C+YF + G + + +YVDD++IA + ++D+ K +++ F MKDLG +VL +E++RDR K T+ ++Q Y+++VL R+G + + V TP+ ++SA S E K + VG+L YA TRPD+++AV +R M +P ++ + K I RY+ + +LG+KF R + G +LEG+V +D+A +++ R+
Sbjct: 229 LYGLKQSPRQWYKRFDRFMMETEYTRSQFDHCVYFRKLPDGSF-IYLLLYVDDMLIASTSKVEIDKLKAQLAREFEMKDLGEAKKVLGMEIKRDRKKGTVCLTQTQYLKKVLDRFGINGKTKAVSTPLAPHFRLSASLSPRTEEERKHMAQVPYANAVGALMYAMVCTRPDISHAVSMVSRYMHDPGKDHWQAVKWILRYIHGMVNLGLKFERDNRLGQNLEGYVDSDYAGDLDKRR 464
BLAST of mRNA_H-paniculata_contig3761.9886.1 vs. uniprot
Match: A0A6S7JFG0_PARCT (Spondin domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JFG0_PARCT) HSP 1 Score: 149 bits (377), Expect = 6.710e-38 Identity = 93/234 (39.74%), Postives = 132/234 (56.41%), Query Frame = 1
Query: 1 LYGLKQSGRNWNNIRDDFLVGIGLDRSTTDLCLYFSRDDGGEADLLVAVYVDDLVIAG-RCEKVDEFKHNISQRFRMKDLGSLLRVLEIEVRRDRPKCTITISQGSYIREVLKRYGFEECRGVPTP-VEGKLKISAPESADKPSEPKSLGARGMVGSLTYAPTGTRPDVAYAVHQAARPMEEPCREDFSTCKRIFRYLSTVPDLGIKFGRKSNNGHSLEGFVGADWAENVEDRK 696
LYGLKQSGRNWNN+ ++L G +S D C+Y D +++ V+VDD++IA E + K ++ +RF+MKDLG L L E + + C I ++Q YI +VL ++G +C+ PTP V G K+S ES PS R +VGSL Y TGTRPD+ Y V + ++ M +P R + K + RYL + G+ F RKSN L GF +DW +V DR+
Sbjct: 132 LYGLKQSGRNWNNLLHEYLQKEGFTQSQADACVYVRMIDSKRC-VIIIVWVDDIIIAASHFELLTTVKESLGERFKMKDLGKLSWFLGTEFK-CKESC-IEMNQKQYIEKVLLKFGMADCKPKPTPCVLGIEKVSDEES---PSLEDPGEYRAIVGSLIYVMTGTRPDLCYIVTKLSQKMSKPTRANVDLAKHVLRYLRGTSEQGLTF-RKSNVPLRLNGFCDSDWGASVADRR 358 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3761.9886.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3761.9886.1 >prot_H-paniculata_contig3761.9886.1 ID=prot_H-paniculata_contig3761.9886.1|Name=mRNA_H-paniculata_contig3761.9886.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=232bp LYGLKQSGRNWNNIRDDFLVGIGLDRSTTDLCLYFSRDDGGEADLLVAVYback to top mRNA from alignment at H-paniculata_contig3761:16618..17382- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3761.9886.1 ID=mRNA_H-paniculata_contig3761.9886.1|Name=mRNA_H-paniculata_contig3761.9886.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=765bp|location=Sequence derived from alignment at H-paniculata_contig3761:16618..17382- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3761:16618..17382- >mRNA_H-paniculata_contig3761.9886.1 ID=mRNA_H-paniculata_contig3761.9886.1|Name=mRNA_H-paniculata_contig3761.9886.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1392bp|location=Sequence derived from alignment at H-paniculata_contig3761:16618..17382- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |