mRNA_H-paniculata_contig3744.9858.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3744.9858.1 vs. uniprot
Match: A0A6H5KPJ7_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPJ7_9PHAE) HSP 1 Score: 91.3 bits (225), Expect = 1.470e-20 Identity = 42/51 (82.35%), Postives = 46/51 (90.20%), Query Frame = 1
Query: 1 SGKAKGTIVVSMTNIYQQEGFRAFWNGNGANVLKIMPESAMRFLGYEVFKN 153
SGK KGTI SM+NIY+QEG+ AFWNGNGAN LKIMPESA+RFLGYEVFKN
Sbjct: 90 SGKTKGTIAKSMSNIYRQEGWLAFWNGNGANTLKIMPESAIRFLGYEVFKN 140
BLAST of mRNA_H-paniculata_contig3744.9858.1 vs. uniprot
Match: D8LH95_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH95_ECTSI) HSP 1 Score: 91.3 bits (225), Expect = 3.000e-20 Identity = 41/52 (78.85%), Postives = 47/52 (90.38%), Query Frame = 1
Query: 1 SGKAKGTIVVSMTNIYQQEGFRAFWNGNGANVLKIMPESAMRFLGYEVFKNA 156
SGK KGTI SM+NIY+QEG+ AFWNGNGAN LKIMPESA+RFLGYE+FKN+
Sbjct: 218 SGKTKGTIAKSMSNIYRQEGWLAFWNGNGANTLKIMPESAIRFLGYEIFKNS 269
BLAST of mRNA_H-paniculata_contig3744.9858.1 vs. uniprot
Match: A0A835Z3Z5_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3Z5_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 2.460e-12 Identity = 29/50 (58.00%), Postives = 40/50 (80.00%), Query Frame = 1
Query: 1 SGKAKGTIVVSMTNIYQQEGFRAFWNGNGANVLKIMPESAMRFLGYEVFK 150
+G +GTI+ + I+ + G+RAFW GNGANV+KIMPESA+RF+GY+ FK
Sbjct: 499 AGTERGTIMGGLRGIWAEGGWRAFWRGNGANVIKIMPESAIRFMGYDFFK 548
BLAST of mRNA_H-paniculata_contig3744.9858.1 vs. uniprot
Match: A0A0L0G9S6_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G9S6_9EUKA) HSP 1 Score: 60.8 bits (146), Expect = 1.730e-9 Identity = 25/51 (49.02%), Postives = 35/51 (68.63%), Query Frame = 1
Query: 1 SGKAKGTIVVSMTNIYQQEGFRAFWNGNGANVLKIMPESAMRFLGYEVFKN 153
+G +G ++ + NIY G+RAFW GNG N++KI PESA++F YE KN
Sbjct: 228 AGPMQGGVLQGLRNIYNDGGWRAFWRGNGMNIIKITPESAVKFYTYETVKN 278
BLAST of mRNA_H-paniculata_contig3744.9858.1 vs. uniprot
Match: L8GVJ4_ACACA (Mitochondrial adp/atp carrier proteins (Iss), putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GVJ4_ACACA) HSP 1 Score: 56.6 bits (135), Expect = 5.150e-8 Identity = 23/50 (46.00%), Postives = 33/50 (66.00%), Query Frame = 1
Query: 1 SGKAKGTIVVSMTNIYQQEGFRAFWNGNGANVLKIMPESAMRFLGYEVFK 150
SG ++ ++ I+ +EGFRA+W GNG NV++IMP A RF Y+ FK
Sbjct: 81 SGPRYQGVLPALRKIWAEEGFRAYWKGNGTNVIRIMPSDAARFYSYDTFK 130
BLAST of mRNA_H-paniculata_contig3744.9858.1 vs. uniprot
Match: A0A2R5G3G9_9STRA (Calcium-binding mitochondrial carrier protein SCaMC-1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G3G9_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 5.350e-8 Identity = 27/52 (51.92%), Postives = 37/52 (71.15%), Query Frame = 1
Query: 1 SGKAKG-TIVVSMTNIYQQEGFRAFWNGNGANVLKIMPESAMRFLGYEVFKN 153
+G G TI + +IY++ GF AF+ GNG+NV+KI+PESAM+F YE KN
Sbjct: 126 TGNVSGRTITQGLRSIYKEGGFVAFYRGNGSNVVKIIPESAMKFFTYERLKN 177
BLAST of mRNA_H-paniculata_contig3744.9858.1 vs. uniprot
Match: A0A7S2WI82_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WI82_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 5.410e-8 Identity = 25/48 (52.08%), Postives = 36/48 (75.00%), Query Frame = 1
Query: 7 KAKGTIVVSMTNIYQQEGFRAFWNGNGANVLKIMPESAMRFLGYEVFK 150
K K +I ++ NIY+ G RAF+ GNG+NV+KIMPESA++F+ Y+ K
Sbjct: 216 KGKISIFQALKNIYRDGGVRAFFRGNGSNVIKIMPESAIKFVAYDQLK 263
BLAST of mRNA_H-paniculata_contig3744.9858.1 vs. uniprot
Match: A0A0B7N5C0_9FUNG (Uncharacterized protein n=1 Tax=Parasitella parasitica TaxID=35722 RepID=A0A0B7N5C0_9FUNG) HSP 1 Score: 56.6 bits (135), Expect = 5.470e-8 Identity = 25/48 (52.08%), Postives = 36/48 (75.00%), Query Frame = 1
Query: 10 AKGTIVVSMTNIYQQEGFRAFWNGNGANVLKIMPESAMRFLGYEVFKN 153
A+ ++ M NIY+Q GFRAF+ GNG NV+KI+PESA++F +E K+
Sbjct: 1657 AQSALLTGMKNIYRQGGFRAFFVGNGLNVIKIVPESAIKFYVFETAKS 1704
BLAST of mRNA_H-paniculata_contig3744.9858.1 vs. uniprot
Match: A0A8H7SKQ8_9FUNG (Uncharacterized protein n=1 Tax=Thamnidium elegans TaxID=101142 RepID=A0A8H7SKQ8_9FUNG) HSP 1 Score: 56.2 bits (134), Expect = 7.420e-8 Identity = 25/51 (49.02%), Postives = 36/51 (70.59%), Query Frame = 1
Query: 1 SGKAKGTIVVSMTNIYQQEGFRAFWNGNGANVLKIMPESAMRFLGYEVFKN 153
+ K + I+ + NIY Q GFRAF+ GNG NV+KI+PESA++F +E K+
Sbjct: 243 NSKPQSAILTGLKNIYHQGGFRAFFVGNGLNVIKIVPESAIKFYVFETTKS 293
BLAST of mRNA_H-paniculata_contig3744.9858.1 vs. uniprot
Match: UPI000D62F0C9 (calcium-binding mitochondrial carrier protein SCaMC-1-like isoform X2 n=2 Tax=Citrus TaxID=2706 RepID=UPI000D62F0C9) HSP 1 Score: 55.8 bits (133), Expect = 1.010e-7 Identity = 24/49 (48.98%), Postives = 36/49 (73.47%), Query Frame = 1
Query: 10 AKGTIVVSMTNIYQQEGFRAFWNGNGANVLKIMPESAMRFLGYEVFKNA 156
A+ +V ++ I+++EGF F+ GNG NVLK+ PESA++F YE+ KNA
Sbjct: 255 AQARLVPTIRKIWKEEGFLGFFRGNGLNVLKVAPESAIKFHAYELLKNA 303 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3744.9858.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3744.9858.1 >prot_H-paniculata_contig3744.9858.1 ID=prot_H-paniculata_contig3744.9858.1|Name=mRNA_H-paniculata_contig3744.9858.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=52bp SGKAKGTIVVSMTNIYQQEGFRAFWNGNGANVLKIMPESAMRFLGYEVFKback to top mRNA from alignment at H-paniculata_contig3744:16403..16558- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3744.9858.1 ID=mRNA_H-paniculata_contig3744.9858.1|Name=mRNA_H-paniculata_contig3744.9858.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=156bp|location=Sequence derived from alignment at H-paniculata_contig3744:16403..16558- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3744:16403..16558- >mRNA_H-paniculata_contig3744.9858.1 ID=mRNA_H-paniculata_contig3744.9858.1|Name=mRNA_H-paniculata_contig3744.9858.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=312bp|location=Sequence derived from alignment at H-paniculata_contig3744:16403..16558- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |