mRNA_H-paniculata_contig3744.9857.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3744.9857.1 vs. uniprot
Match: A0A6H5KPJ7_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPJ7_9PHAE) HSP 1 Score: 263 bits (673), Expect = 2.550e-79 Identity = 128/159 (80.50%), Postives = 144/159 (90.57%), Query Frame = 3
Query: 432 RVDGWKGLFRGLGPSLMGIVPYSGTDLAIFYTLKARWMADNPETKEGPDVMTLLGFGALSSTCGQLVAYPLQLVRTKLQAQGVSGVPYAYTGTVDCFKKTLKHEGVQGLYRGLGPNFLKALPAIAISYAVFEKARSKLSTYVPRYGR-NGRRIMVGGES 905
R +G +GLFRGL SLMGIVPYSGTDLA+FYTLKARWMA +P KEGPDVMTLLGFGALSSTCGQLVAYPLQLVRTKLQAQG+ G+P+ YT T DCF++TLKHEGVQGLYRGLGPNFLKALPAIAISYAVFEKAR+KLS+ VP++G + RR++VGGES
Sbjct: 199 RENGMRGLFRGLPASLMGIVPYSGTDLAMFYTLKARWMAAHPGAKEGPDVMTLLGFGALSSTCGQLVAYPLQLVRTKLQAQGMPGIPHTYTSTADCFRRTLKHEGVQGLYRGLGPNFLKALPAIAISYAVFEKARTKLSSLVPKHGGGSSRRVLVGGES 357
BLAST of mRNA_H-paniculata_contig3744.9857.1 vs. uniprot
Match: D8LH95_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH95_ECTSI) HSP 1 Score: 265 bits (678), Expect = 1.820e-78 Identity = 129/159 (81.13%), Postives = 144/159 (90.57%), Query Frame = 3
Query: 432 RVDGWKGLFRGLGPSLMGIVPYSGTDLAIFYTLKARWMADNPETKEGPDVMTLLGFGALSSTCGQLVAYPLQLVRTKLQAQGVSGVPYAYTGTVDCFKKTLKHEGVQGLYRGLGPNFLKALPAIAISYAVFEKARSKLSTYVPRYGR-NGRRIMVGGES 905
R +G +GLFRGL SLMGIVPYSGTDLA+FYTLKARWMA NP KEGPDVMTLLGFGALSSTCGQLVAYPLQLVRTKLQAQG+ G+P+ YT T DCF++TLKHEGVQGLYRGLGPNFLKALPAIAISYAVFEKAR+KLS+ VP++G + RR++VGGES
Sbjct: 327 RENGMRGLFRGLPASLMGIVPYSGTDLAMFYTLKARWMAANPGAKEGPDVMTLLGFGALSSTCGQLVAYPLQLVRTKLQAQGMPGIPHTYTSTADCFRRTLKHEGVQGLYRGLGPNFLKALPAIAISYAVFEKARTKLSSLVPKHGGGSNRRVLVGGES 485
BLAST of mRNA_H-paniculata_contig3744.9857.1 vs. uniprot
Match: A0A2R5G3G9_9STRA (Calcium-binding mitochondrial carrier protein SCaMC-1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G3G9_9STRA) HSP 1 Score: 163 bits (412), Expect = 2.860e-41 Identity = 79/140 (56.43%), Postives = 101/140 (72.14%), Query Frame = 3
Query: 432 RVDGWKGLFRGLGPSLMGIVPYSGTDLAIFYTLKARWMADNPETKEGPDVMTLLGFGALSSTCGQLVAYPLQLVRTKLQAQGVSG-VPYAYTGTVDCFKKTLKHEGVQGLYRGLGPNFLKALPAIAISYAVFEKARSKLS 848
R +G + L+RGLG SL G+ PY+G DL +F TLK W+ +P +GP +TLL FGA SST G VAYPLQL+RTKLQAQG++ +P Y+G +DCF KT++ GV+GLYRGL PN LK LPA+A SY V+E+ R LS
Sbjct: 236 RYEGVRALYRGLGASLAGVAPYAGIDLMVFMTLKESWIRAHPHEVDGPGALTLLLFGATSSTIGATVAYPLQLIRTKLQAQGMNASMPVTYSGPLDCFHKTIRDNGVRGLYRGLLPNLLKTLPAVATSYLVYEETRKALS 375
BLAST of mRNA_H-paniculata_contig3744.9857.1 vs. uniprot
Match: A0A024UIL9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UIL9_9STRA) HSP 1 Score: 160 bits (405), Expect = 2.050e-40 Identity = 79/136 (58.09%), Postives = 104/136 (76.47%), Query Frame = 3
Query: 438 DGWKGLFRGLGPSLMGIVPYSGTDLAIFYTLKARWMADNPETKEGPDVMTLLGFGALSSTCGQLVAYPLQLVRTKLQAQGVSGVPYAYTGTVDCFKKTLKHEGVQGLYRGLGPNFLKALPAIAISYAVFEKARSKL 845
DG+ GL+RGL PSL+GIVPY+G DLA+F+TLK + + P V +L FGA+SS+CGQ+V+YPLQ+VRTKLQAQG++G P +TG DCF K L+ G++GLYRG+ PNFLK++PAI+ISYAVFE + L
Sbjct: 230 DGFHGLYRGLVPSLLGIVPYAGVDLALFFTLKELYTT---KFDVAPSVGHVLVFGAISSSCGQVVSYPLQVVRTKLQAQGMAGRPVVFTGMTDCFVKILQSYGLRGLYRGIVPNFLKSVPAISISYAVFETVKDAL 362
BLAST of mRNA_H-paniculata_contig3744.9857.1 vs. uniprot
Match: W4FFC6_9STRA (Uncharacterized protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FFC6_9STRA) HSP 1 Score: 157 bits (397), Expect = 2.160e-39 Identity = 79/136 (58.09%), Postives = 103/136 (75.74%), Query Frame = 3
Query: 438 DGWKGLFRGLGPSLMGIVPYSGTDLAIFYTLKARWMADNPETKEGPDVMTLLGFGALSSTCGQLVAYPLQLVRTKLQAQGVSGVPYAYTGTVDCFKKTLKHEGVQGLYRGLGPNFLKALPAIAISYAVFEKARSKL 845
DG GL+RGL PSL+GIVPY+G DLA+F+TLK + + + P V +L FGA+SS+CGQ+V+YPLQ+VRTKLQAQG++G P +TG DC K L+ G++GLYRGL PNFLK++PAI+ISYAVFE + L
Sbjct: 220 DGLHGLYRGLLPSLLGIVPYAGVDLALFFTLKESYTT---KFEAPPSVGHVLLFGAISSSCGQVVSYPLQVVRTKLQAQGMAGRPVIFTGMTDCLVKILQTHGLRGLYRGLLPNFLKSVPAISISYAVFETVKDAL 352
BLAST of mRNA_H-paniculata_contig3744.9857.1 vs. uniprot
Match: A0A1V9ZGN4_9STRA (Carrier superfamily protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZGN4_9STRA) HSP 1 Score: 156 bits (394), Expect = 6.980e-39 Identity = 79/136 (58.09%), Postives = 102/136 (75.00%), Query Frame = 3
Query: 438 DGWKGLFRGLGPSLMGIVPYSGTDLAIFYTLKARWMADNPETKEGPDVMTLLGFGALSSTCGQLVAYPLQLVRTKLQAQGVSGVPYAYTGTVDCFKKTLKHEGVQGLYRGLGPNFLKALPAIAISYAVFEKARSKL 845
DG GL+RGL PSL+GIVPY+G DLA+F+TLK +M + + P V +L FGALSSTCGQ+V+YPLQ+VRTKLQAQG+ G Y+G DC K ++ GV GLYRG+ PNF+K++PAI+ISYAVFE ++ L
Sbjct: 229 DGIAGLYRGLTPSLLGIVPYAGVDLALFFTLKEAYMN---KFEVAPSVGHVLVFGALSSTCGQIVSYPLQVVRTKLQAQGMKGRHVVYSGMRDCLVKIVQAHGVLGLYRGILPNFMKSVPAISISYAVFESVKNAL 361
BLAST of mRNA_H-paniculata_contig3744.9857.1 vs. uniprot
Match: A0A1W0AAR9_9STRA (Carrier superfamily protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AAR9_9STRA) HSP 1 Score: 155 bits (393), Expect = 9.200e-39 Identity = 76/136 (55.88%), Postives = 102/136 (75.00%), Query Frame = 3
Query: 438 DGWKGLFRGLGPSLMGIVPYSGTDLAIFYTLKARWMADNPETKEGPDVMTLLGFGALSSTCGQLVAYPLQLVRTKLQAQGVSGVPYAYTGTVDCFKKTLKHEGVQGLYRGLGPNFLKALPAIAISYAVFEKARSKL 845
DG GL+RGL PSL+GI+PY+G DLA+F+TLK ++ + + P V +L FGA+SSTCGQ+V+YPLQ+VRTKLQAQG+ G YTG DC K ++ G+ GLYRG+ PNF+K++PAI+ISYAVFE ++ L
Sbjct: 227 DGIAGLYRGLAPSLLGILPYAGVDLALFFTLKEAYVN---KYEHAPSVGHVLLFGAISSTCGQVVSYPLQVVRTKLQAQGMKGRHVVYTGMRDCLVKIVQSHGISGLYRGILPNFMKSVPAISISYAVFETVKNSL 359
BLAST of mRNA_H-paniculata_contig3744.9857.1 vs. uniprot
Match: A0A6G0WJC7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJC7_9STRA) HSP 1 Score: 155 bits (391), Expect = 1.460e-38 Identity = 78/136 (57.35%), Postives = 103/136 (75.74%), Query Frame = 3
Query: 438 DGWKGLFRGLGPSLMGIVPYSGTDLAIFYTLKARWMADNPETKEGPDVMTLLGFGALSSTCGQLVAYPLQLVRTKLQAQGVSGVPYAYTGTVDCFKKTLKHEGVQGLYRGLGPNFLKALPAIAISYAVFEKARSKL 845
DG GL+RGL PSL+GIVPY+G DLA+F+TLK ++A P V +L FGA+SS+CGQ+V+YPLQ+VRTKLQAQG+ G P ++G DCF K L+ G++GLYRG+ PNFLK++PAI+ISYA FE ++ L
Sbjct: 219 DGIAGLYRGLIPSLLGIVPYAGVDLALFFTLKEAYVA---HFDVAPSVGHVLLFGAVSSSCGQVVSYPLQVVRTKLQAQGMVGRPVVFSGMGDCFFKILQTHGLRGLYRGIVPNFLKSVPAISISYATFESVKNVL 351
BLAST of mRNA_H-paniculata_contig3744.9857.1 vs. uniprot
Match: A0A485LFL7_9STRA (Aste57867_20709 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LFL7_9STRA) HSP 1 Score: 155 bits (391), Expect = 2.090e-38 Identity = 79/136 (58.09%), Postives = 101/136 (74.26%), Query Frame = 3
Query: 438 DGWKGLFRGLGPSLMGIVPYSGTDLAIFYTLKARWMADNPETKEGPDVMTLLGFGALSSTCGQLVAYPLQLVRTKLQAQGVSGVPYAYTGTVDCFKKTLKHEGVQGLYRGLGPNFLKALPAIAISYAVFEKARSKL 845
DG +GL+RGL PSL+GIVPY+G DLA+F+T K A P V +L FGA+SS+CGQ+V+YPLQ+VRTKLQAQG++G P + G DCF K L+ GV+GLYRGL PNFLK++PAI+ISYA FE ++ L
Sbjct: 235 DGIRGLYRGLVPSLLGIVPYAGVDLALFFTFKE---AFTRHFDVAPSVGHVLLFGAVSSSCGQVVSYPLQVVRTKLQAQGMAGRPVIFAGMGDCFVKILQTHGVRGLYRGLLPNFLKSVPAISISYATFESVKNAL 367
BLAST of mRNA_H-paniculata_contig3744.9857.1 vs. uniprot
Match: A0A0H5RCR4_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RCR4_9EUKA) HSP 1 Score: 152 bits (384), Expect = 7.240e-38 Identity = 70/129 (54.26%), Postives = 95/129 (73.64%), Query Frame = 3
Query: 441 GWKGLFRGLGPSLMGIVPYSGTDLAIFYTLKARWMADNPETKEGPDVMTLLGFGALSSTCGQLVAYPLQLVRTKLQAQGVSGVPYAYTGTVDCFKKTLKHEGVQGLYRGLGPNFLKALPAIAISYAVFE 827
G +G ++GL + MGIVPY+G DL++F + W + P P + LLGFGA+SSTCGQLVAYP QL+RT+LQ QG+ G Y G DCF+KT++ +G++GLYRGL PNFLKALP+I+ISYA+++
Sbjct: 178 GVRGFYKGLTAATMGIVPYAGVDLSLFAFFRKTWESRYPH--RNPSALQLLGFGAISSTCGQLVAYPFQLIRTRLQCQGMPGRDVIYQGMADCFRKTIESDGLKGLYRGLQPNFLKALPSISISYAIYD 304 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3744.9857.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3744.9857.1 >prot_H-paniculata_contig3744.9857.1 ID=prot_H-paniculata_contig3744.9857.1|Name=mRNA_H-paniculata_contig3744.9857.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=168bp MNTILYHRVDGWKGLFRGLGPSLMGIVPYSGTDLAIFYTLKARWMADNPEback to top mRNA from alignment at H-paniculata_contig3744:12274..14775- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3744.9857.1 ID=mRNA_H-paniculata_contig3744.9857.1|Name=mRNA_H-paniculata_contig3744.9857.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2502bp|location=Sequence derived from alignment at H-paniculata_contig3744:12274..14775- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3744:12274..14775- >mRNA_H-paniculata_contig3744.9857.1 ID=mRNA_H-paniculata_contig3744.9857.1|Name=mRNA_H-paniculata_contig3744.9857.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1008bp|location=Sequence derived from alignment at H-paniculata_contig3744:12274..14775- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |