mRNA_H-paniculata_contig3742.9852.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3742.9852.1 vs. uniprot
Match: A0A2S2NZC6_SCHGA (Uncharacterized protein ycf68 n=1 Tax=Schizaphis graminum TaxID=13262 RepID=A0A2S2NZC6_SCHGA) HSP 1 Score: 61.2 bits (147), Expect = 2.150e-10 Identity = 31/59 (52.54%), Postives = 36/59 (61.02%), Query Frame = 1
Query: 1 RKMGVRSGFHDPYELGYTRATMASTKTCKREKLKPIFESFLGSDCGLQFARIKLESLSI 177
RK G S H PY+LGYTRATM TK CK + ++ L SDC LQ A +K ESL I
Sbjct: 13 RKAGTTSDHHAPYDLGYTRATMDGTKGCKTARSSQSHKTILSSDCRLQLAYMKPESLVI 71
BLAST of mRNA_H-paniculata_contig3742.9852.1 vs. uniprot
Match: A8SSM3_9FIRM (Uncharacterized protein n=6 Tax=Eubacteriales TaxID=186802 RepID=A8SSM3_9FIRM) HSP 1 Score: 60.5 bits (145), Expect = 4.420e-10 Identity = 32/59 (54.24%), Postives = 37/59 (62.71%), Query Frame = 1
Query: 1 RKMGVRSGFHDPYELGYTRATMASTKTCKREKLKPIFESFLGSDCGLQFARIKLESLSI 177
RK+G+ S H PY+LGYTRATMA TK K K + L SDC LQ +KLESL I
Sbjct: 13 RKVGMTSNHHAPYDLGYTRATMAVTKRSKPVKASKPQKGCLSSDCSLQLDYMKLESLVI 71
BLAST of mRNA_H-paniculata_contig3742.9852.1 vs. uniprot
Match: A9LGX2_9BACT (Uncharacterized protein n=1 Tax=uncultured planctomycete 3FN TaxID=455066 RepID=A9LGX2_9BACT) HSP 1 Score: 60.1 bits (144), Expect = 8.260e-10 Identity = 36/76 (47.37%), Postives = 42/76 (55.26%), Query Frame = 1
Query: 1 RKMGVRSGFHDPYELGYTRATMASTKTCKREKLKPIFESFLGSDCGLQFARIKLESLSIIVYSGCRGEHVVGPCTH 228
RK G S H Y G TRATM TK K ++ ++ L SDC LQ A +KLESL I C GE+V PCTH
Sbjct: 14 RKAGTTSSHHGLYVQGCTRATMGRTKGSKLARVSKPQKASLSSDCRLQLAYMKLESLVIAGQLYC-GEYVPEPCTH 88
BLAST of mRNA_H-paniculata_contig3742.9852.1 vs. uniprot
Match: A0A2S7V079_9GAMM (Uncharacterized protein n=1 Tax=Psychrosphaera saromensis TaxID=716813 RepID=A0A2S7V079_9GAMM) HSP 1 Score: 58.5 bits (140), Expect = 2.510e-9 Identity = 29/60 (48.33%), Postives = 37/60 (61.67%), Query Frame = 1
Query: 1 RKMGVRSGFHDPYELGYTRATMASTKTCKREKLKPIFESFLGSDCGLQFARIKLESLSII 180
RK+G S H PYE+GYTRATMASTK CK ++ ++ D LQ +K ESL I+
Sbjct: 13 RKVGTTSSHHGPYEMGYTRATMASTKGCKLARVSGSHKACRSPDWSLQLDSMKSESLVIV 72
BLAST of mRNA_H-paniculata_contig3742.9852.1 vs. uniprot
Match: D1YGT1_LACGS (Uncharacterized protein n=2 Tax=Lactobacillus TaxID=1578 RepID=D1YGT1_LACGS) HSP 1 Score: 58.2 bits (139), Expect = 6.590e-9 Identity = 30/59 (50.85%), Postives = 36/59 (61.02%), Query Frame = 1
Query: 1 RKMGVRSGFHDPYELGYTRATMASTKTCKREKLKPIFESFLGSDCGLQFARIKLESLSI 177
RK+G+ S H PY+LGYTRATM T + K ++ L SDC LQ A KLESL I
Sbjct: 21 RKVGMTSSHHAPYDLGYTRATMDGTTRSEPAKASGSLKAVLSSDCRLQLAYTKLESLVI 79
BLAST of mRNA_H-paniculata_contig3742.9852.1 vs. uniprot
Match: A0A2S7V0H2_9GAMM (Uncharacterized protein (Fragment) n=1 Tax=Psychrosphaera saromensis TaxID=716813 RepID=A0A2S7V0H2_9GAMM) HSP 1 Score: 53.5 bits (127), Expect = 1.090e-7 Identity = 26/55 (47.27%), Postives = 33/55 (60.00%), Query Frame = 1
Query: 1 RKMGVRSGFHDPYELGYTRATMASTKTCKREKLKPIFESFLGSDCGLQFARIKLE 165
RK+G S H PYE+GYTRATMASTK CK ++ ++ D LQ +K E
Sbjct: 14 RKVGTTSSHHGPYEMGYTRATMASTKGCKLARVSGSHKACRSPDWSLQLDSMKSE 68
BLAST of mRNA_H-paniculata_contig3742.9852.1 vs. uniprot
Match: A0A231HGN8_9BURK (Uncharacterized protein n=5 Tax=Bacteria TaxID=2 RepID=A0A231HGN8_9BURK) HSP 1 Score: 53.5 bits (127), Expect = 1.590e-7 Identity = 27/55 (49.09%), Postives = 34/55 (61.82%), Query Frame = 1
Query: 13 VRSGFHDPYELGYTRATMASTKTCKREKLKPIFESFLGSDCGLQFARIKLESLSI 177
+ S H PY+LGYTRATM TK + + ++ L SDC LQ A +KLESL I
Sbjct: 1 MTSNHHAPYDLGYTRATMDGTKGSETARFSQSHKTVLSSDCRLQLACMKLESLVI 55
BLAST of mRNA_H-paniculata_contig3742.9852.1 vs. uniprot
Match: A0A0N1KF99_9BACI (Uncharacterized protein n=1 Tax=Geobacillus sp. BCO2 TaxID=1547578 RepID=A0A0N1KF99_9BACI) HSP 1 Score: 52.4 bits (124), Expect = 4.510e-7 Identity = 27/55 (49.09%), Postives = 34/55 (61.82%), Query Frame = 1
Query: 13 VRSGFHDPYELGYTRATMASTKTCKREKLKPIFESFLGSDCGLQFARIKLESLSI 177
+ S H PY+LGYTRATM TK C+ + ++ L SDC LQ A +K ESL I
Sbjct: 1 MTSNHHAPYDLGYTRATMGGTKGCEPARGSESQKAALSSDCRLQLACMKPESLVI 55
BLAST of mRNA_H-paniculata_contig3742.9852.1 vs. uniprot
Match: A0A4Y7RH53_9FIRM (Uncharacterized protein n=4 Tax=Pelotomaculum TaxID=191373 RepID=A0A4Y7RH53_9FIRM) HSP 1 Score: 52.0 bits (123), Expect = 6.380e-7 Identity = 28/55 (50.91%), Postives = 34/55 (61.82%), Query Frame = 1
Query: 13 VRSGFHDPYELGYTRATMASTKTCKREKLKPIFESFLGSDCGLQFARIKLESLSI 177
+ S H PY LGYTRATMA TK + + ++ L SDC LQFA +K ESL I
Sbjct: 1 MTSNHHAPYVLGYTRATMAGTKGSEAARRSKSQKAGLSSDCRLQFACMKSESLVI 55
BLAST of mRNA_H-paniculata_contig3742.9852.1 vs. uniprot
Match: A0A143Z1R9_9LACT (Uncharacterized protein n=9 Tax=Bacilli TaxID=91061 RepID=A0A143Z1R9_9LACT) HSP 1 Score: 51.6 bits (122), Expect = 9.030e-7 Identity = 26/55 (47.27%), Postives = 33/55 (60.00%), Query Frame = 1
Query: 13 VRSGFHDPYELGYTRATMASTKTCKREKLKPIFESFLGSDCGLQFARIKLESLSI 177
+ S H PY+LGYTRATM T + K + ++ L SDC LQ A +K ESL I
Sbjct: 1 MTSNHHAPYDLGYTRATMDGTTSSKTARSSESLKAILSSDCRLQLAYMKPESLVI 55 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3742.9852.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3742.9852.1 >prot_H-paniculata_contig3742.9852.1 ID=prot_H-paniculata_contig3742.9852.1|Name=mRNA_H-paniculata_contig3742.9852.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=81bp MGVRSGFHDPYELGYTRATMASTKTCKREKLKPIFESFLGSDCGLQFARIback to top mRNA from alignment at H-paniculata_contig3742:267..515- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3742.9852.1 ID=mRNA_H-paniculata_contig3742.9852.1|Name=mRNA_H-paniculata_contig3742.9852.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=249bp|location=Sequence derived from alignment at H-paniculata_contig3742:267..515- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3742:267..515- >mRNA_H-paniculata_contig3742.9852.1 ID=mRNA_H-paniculata_contig3742.9852.1|Name=mRNA_H-paniculata_contig3742.9852.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=486bp|location=Sequence derived from alignment at H-paniculata_contig3742:267..515- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |