mRNA_H-paniculata_contig37372.9844.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig37372.9844.1
Unique NamemRNA_H-paniculata_contig37372.9844.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig37372.9844.1 vs. uniprot
Match: UPI00109BA0B3 (uncharacterized protein LOC114576718 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BA0B3)

HSP 1 Score: 122 bits (306), Expect = 4.520e-27
Identity = 94/276 (34.06%), Postives = 148/276 (53.62%), Query Frame = 1
Query:  118 EKSIVIKSTDKNLGCAIMERKWYMNECLRQLLDPTTYTSISSSNNILQCTKVKYGMHKDELHSLHTALNYHNTTAWMLKYIIHNYSETFSIP-NFHIVPKINKPITVGRPIAAGHSAAITPRSALLCHWLQPVLDKLITVLKDSRTLIREMECTHFDNRSAWTLVTADVVSLYPSLNVQQVITNTMIAIREHYGPSWSSQIYHFLERILNFVLKNGYLQFDGKLFLQHKCLAMGTPSAPILANITLAISERRLLEKHSQ-IYLFRRYIDDTFCIVK 939
            ++S+ + +TDKNLG A++   W   E L+QL D  +Y+ +S+    L+  +V     +D+L S        N   ++  Y      + F+ P  F+I+PKI+K   VGRPIAA HS    P S  +   ++P L K+ TVL+DS  LI+ +E     ++    LVTADV+SLYP++++++ +    + +RE   P     I        N VLK    +F  ++F Q   +AMGTP A   AN  +   E+ L+ + S  + L++R+IDD FCI K
Sbjct:  135 DESVKVLATDKNLGPALVSTDWVKTETLKQLNDSQSYSIVSTQEWGLRRRQVIAT--RDKLLSTFKKFVPSNALKFLRSY------DHFTDPAKFYIIPKIHKNPMVGRPIAASHSYITRPLSIFVDEXVKPRL-KMPTVLRDSGELIQALESIRLPSQCF--LVTADVISLYPNVDIKKALIALDLLLREAKAPETPLLIQFARLVFENNVLKT---EFSEEIFHQIYGIAMGTPFAVTAANAFMYYLEKDLVSQFSNHLVLYKRFIDDIFCIWK 396          
BLAST of mRNA_H-paniculata_contig37372.9844.1 vs. uniprot
Match: A0A4Q7KAQ3_METCM (Uncharacterized protein n=1 Tax=Pochonia chlamydosporia 123 TaxID=1052797 RepID=A0A4Q7KAQ3_METCM)

HSP 1 Score: 120 bits (302), Expect = 1.180e-26
Identity = 90/322 (27.95%), Postives = 158/322 (49.07%), Query Frame = 1
Query:   58 HSPISNNEKQAPKWL--KNQALEKSIVIKSTDKNLGCAIMERKWYMNECLRQLLDPTTY---TSISSSNNILQCTKVKYGMHKDELHSLHTALNYHNTTAWMLKYIIHNYSETFSIPNFHIVPKINKPITVGRPIAAGHSAAITPRSALLCHWLQPVLDKLITVLKDSRTLIREMECTHFDNRSAWTLVTADVVSLYPSLNVQQVITNTMIAIREHYGPSWSSQIYHFLERILNFVLKNGYLQFDGKLFLQHKCLAMGTPSAPILANITLAISERRL-LEKHSQIYLFRRYIDDTFCIVKDTERVTHQLLSLYQELDMKLTF 1005
            ++ I +   Q  KW+  ++   +  +++K TDKNLG A+    WY  + L+ L D  TY   T I +   + +  K+        +   H   N       M KYI H  ++T  +P+FH +PK++K     RPI   HS   +  S +L H LQP+L ++  ++  S+ +I +++    +      ++T DVVS Y ++ + +       A     G S  S     +  ++ F+++N YL++ G  F Q   LAMGT SAP++ANI  A  E  L L ++ ++  + RYIDD  C+ + T     +    ++   +++T+
Sbjct:  120 YTSIPSRSTQLSKWVTVRDYLADHQLLVKLTDKNLGLAVFPTSWYDAKILQMLADTRTYEWVTEIPAPALVEKLMKL--------VKKWHLPPN-------MTKYITHR-TKT-EVPHFHAIPKVHKTPWALRPIVPSHSWVTSCVSTVLDHLLQPILKQIPWIVSSSKEVIVKLQEVKLNPGEPLWILTGDVVSFYTNIPIDECARILQGAWTHFVGDS--SIDGKTILSMVRFIMENNYLEYQGAKFRQVNGLAMGTSSAPVIANIYAARHETALKLSQNPRVRFYGRYIDDCLCLFQGTREEVQEFCDNFRIGPLEVTW 422          
BLAST of mRNA_H-paniculata_contig37372.9844.1 vs. uniprot
Match: A0A179EVJ5_METCM (Reverse transcriptase (RNA-dependent DNA polymerase) domain-containing protein n=1 Tax=Pochonia chlamydosporia 170 TaxID=1380566 RepID=A0A179EVJ5_METCM)

HSP 1 Score: 116 bits (290), Expect = 4.470e-25
Identity = 87/309 (28.16%), Postives = 146/309 (47.25%), Query Frame = 1
Query:   97 WLKNQAL--EKSIVIKSTDKNLGCAIMERKWYMNECLRQLLDPTTYTSISSSNNILQCTKVKYGMHKDELHSLHTALNYHNTTAWMLKYIIHNYSETFSIPNFHIVPKINKPITVGRPIAAGHSAAITPRSALLCHWLQPVLDKLITVLKDSRTLIREMECTHFDNRSAWTLVTADVVSLYPSLNVQQVITNTMIAIREHYGPSWSSQIYHFLERILNFVLKNGYLQFDGKLFLQHKCLAMGTPSAPILANITLAISER-RLLEKHSQIYLFRRYIDDTFCIVKDTERVTHQLLSLYQELDMKLTFDTT 1014
            W + Q    +  +++K TDKNLG A+ +++WY+ E  + L     Y  I+S  ++ Q     YG            L        M ++I    +    IP FH +PK++K     RPI   HS   +  S ++ H  +P+LDKL  V+  S+ +I  +     ++ + W + T DVV+ Y ++N +      ++    H   S S      + +++ FV++N Y  F  +++ Q   LAMGT  AP+LANI  A  ER R L     + L+ RYIDD   I + T +     L+  +   + + +D +
Sbjct:  120 WTRVQQFLNDNDLLVKLTDKNLGLAVFQKEWYIQEIHKMLGSNKAY-KIASDLDMEQLLDTLYGQ-----------LQRWKLPKNMTRFIREKTAS--KIPEFHAIPKVHKMPWALRPIVPSHSWVTSRVSEVVDHLCRPILDKLPWVVDSSKKVINNLSKIRIESDNVW-ICTGDVVAFYTNINARACCK--VVCGAWHRYASDSKIPTETISQMIKFVMENNYFSFQDQVWKQLDGLAMGTSCAPLLANIYAAYYERKRQLVYQPGVRLYNRYIDDILVIFEGTRKELMHFLNQVKLGPLTINWDVS 411          
BLAST of mRNA_H-paniculata_contig37372.9844.1 vs. uniprot
Match: A0A8H8NDN4_9AGAM (Reverse transcriptase n=1 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8NDN4_9AGAM)

HSP 1 Score: 116 bits (290), Expect = 5.840e-25
Identity = 85/294 (28.91%), Postives = 141/294 (47.96%), Query Frame = 1
Query:  127 IVIKSTDKNLGCAIMERKWYMNECLRQLLDPTTYTSISSSNNILQCTKVKYGMHKDELHSLHTALNYHNTTAWMLKYIIHNYSETF---SIPNFHIVPKINKPITVGRPIAAGHSAAITPRSALLCHWLQPVLDKLITVLKDSRTLIREME-CTHFDNRSAWTLVTADVVSLYPSLNVQ---QVITNTMIAIREHYGPSWSS----------------QIYHFLERILNFVLKNGYLQFDGKLFLQHKCLAMGTPSAPILANITLAISERRLLEKHSQIYLFRRYIDDTFCIVK 939
            +++  TDKNLGCA++ R WY+N+C   L D   Y  I     +    + +  + +     L     +   T    K+ +H   E      +P F+ +PKI+K     RPI   HSA + P + +  H L+P++     VL+ S+ L  E++  T   NR  W +V+ DV + YP++ ++   +++T   +   +HY PSW +                ++++ L  I N    N   +F  K + Q K LAMG  S+P +AN+  A  E + +    +I  +RRYIDD   IV+
Sbjct:  157 LLVLPTDKNLGCAVVTRDWYLNQCNAMLADKEAYQQIWPVIAMRHMVQKRVAIRQ-----LAEQGEWPGVTKQQRKWCVHAIPEWDPWQGMPRFYGIPKIHKKPWKMRPIVPCHSAMVNPAAKIFSHLLKPIVKMRPYVLEGSKALAIELDRVTLPRNRKVW-IVSGDVTAYYPNVPLEASRRIVTTYCV---DHYYPSWFNDDDELGNLSEDQVAKMKVFNDLFDIAN---DNLIFRFQDKFYRQLKGLAMGVASSPDIANLYGAYFEEQFIPTEKRILFYRRYIDDVLAIVE 438          
BLAST of mRNA_H-paniculata_contig37372.9844.1 vs. uniprot
Match: A0A4S4L9S1_9AGAM (Uncharacterized protein n=1 Tax=Bondarzewia mesenterica TaxID=1095465 RepID=A0A4S4L9S1_9AGAM)

HSP 1 Score: 112 bits (279), Expect = 1.590e-23
Identity = 92/296 (31.08%), Postives = 138/296 (46.62%), Query Frame = 1
Query:   97 WL---KNQALEKSIVIKSTDKNLGCAIMERKWYMNECLRQLLDPTTYTSISSSNN--ILQCTKVKYGMHKDELHSLHTALNYHNTTAWMLKYIIHNYSETFSIPNFHIVPKINKPITVGRPIAAGHSAAITPRSALLCHWLQPVLDKLITVLKDSRTLIREMECTHFDNRSAWTLVTADVVSLYPSLNVQQVITNTMIAIREHYGPSW------SSQIYHFLERILNFVLKNGYLQFDGKLFLQHKCLAMGTPSAPILANITLAISERRLLE-----KHSQIYLFRRYIDDTFCIV 936
            WL   K   L+   ++  TDKNLG A++ RKW++      L D   YT IS++    IL+ T+ K     D        LN      ++   I  +  E   +P F+ VPKI+K  T  RPI   HS A  P +  +   L+P+L +   VLK S+ L + +     D      +V+ D+V+ YP++   +     M  + E Y  +W      S +  H  +R LN   K+  + F  + FLQ K LAMG   +P LAN+  A  E ++L      KH   + F R+IDD   +V
Sbjct:   95 WLTEVKEYLLKNDYIVTPTDKNLGAAVVTRKWFIENSKLLLSDANNYTKISAAERQLILERTRTKVEEAADFTEKF---LNNEQLEKFLRSKIPESRLEEPKVPVFYGVPKIHKTPTKMRPIVPCHSCAQGPAAKYVSKQLKPLLAERPYVLKGSKDLAQRISKLKLDPSRKKYIVSGDIVAFYPNIPADKC----MDIVFEWYK-AWALAHEISQEEIHLFKRCLNLANKDLIIDFQDETFLQKKGLAMGVACSPDLANLYGAYFEEKILASDEVIKHEMPF-FARFIDDVIGVV 381          
BLAST of mRNA_H-paniculata_contig37372.9844.1 vs. uniprot
Match: A0A4S4LT14_9AGAM (Uncharacterized protein n=1 Tax=Bondarzewia mesenterica TaxID=1095465 RepID=A0A4S4LT14_9AGAM)

HSP 1 Score: 111 bits (277), Expect = 3.910e-23
Identity = 92/296 (31.08%), Postives = 138/296 (46.62%), Query Frame = 1
Query:   97 WL---KNQALEKSIVIKSTDKNLGCAIMERKWYMNECLRQLLDPTTYTSISSSNN--ILQCTKVKYGMHKDELHSLHTALNYHNTTAWMLKYIIHNYSETFSIPNFHIVPKINKPITVGRPIAAGHSAAITPRSALLCHWLQPVLDKLITVLKDSRTLIREMECTHFDNRSAWTLVTADVVSLYPSLNVQQVITNTMIAIREHYGPSW------SSQIYHFLERILNFVLKNGYLQFDGKLFLQHKCLAMGTPSAPILANITLAISERRLLE-----KHSQIYLFRRYIDDTFCIV 936
            WL   K   L+   ++  TDKNLG A++ RKW++      L D   YT IS++    IL+ T+ K     D        LN      ++   I  +  E   +P F+ VPKI+K  T  RPI   HS A  P +  +   L+P+L +   VLK S+ L + +     D      +V+ D+V+ YP++   +     M  + E Y  +W      S +  H  +R LN   K+  + F  + FLQ K LAMG   +P LAN+  A  E ++L      KH   + F R+IDD   +V
Sbjct:  403 WLTEVKEYLLKNDYIVTPTDKNLGAAVVTRKWFIENSKLLLSDANNYTKISAAERQLILERTRTKVEEAADFTEKF---LNNEQLEKFLRSKIPESRLEEPKVPVFYGVPKIHKTPTKMRPIVPCHSCAQGPAAKYVSKQLKPLLAERPYVLKGSKDLAQRISKLKLDPSRKKYIVSGDIVAFYPNIPADKC----MDIVFEWYK-AWALAHEISQEEIHLFKRCLNLANKDLIIDFQDETFLQKKGLAMGVACSPDLANLYGAHFEEKILASDEVVKHEMPF-FARFIDDVIGVV 689          
BLAST of mRNA_H-paniculata_contig37372.9844.1 vs. uniprot
Match: A0A0L1IKU6_ASPNO (Uncharacterized protein n=1 Tax=Aspergillus nomiae NRRL 13137 TaxID=1509407 RepID=A0A0L1IKU6_ASPNO)

HSP 1 Score: 109 bits (272), Expect = 1.120e-22
Identity = 82/293 (27.99%), Postives = 139/293 (47.44%), Query Frame = 1
Query:  118 EKSIVIKSTDKNLGCAIMERKWYMNECLRQLLDPTTYTSISSSNNILQCTKVKYGMHKDELHSLHTALNYHNTTAWMLKYIIHNYSE---TFSIPNFHIVPKINKPITVGRPIAAGHSAAITPRSALLCHWLQPVLDKLITVLKDSRTLIREMECTHFDNRSAWTLVTADVVSLYPSLNVQQVITNTMIAIREHYGPSWSSQIY-HFLERILNFVLKNGYLQFDGKLFLQHKCLAMGTPSAPILANITLAISERRLLEKHSQ-IYLFRRYIDDTFCIVKDTERVTHQLLSLYQ 981
            E  +++K TDKNLG A+  ++WY++E ++ L D TTY  ++S    L   K+           L   LN      W L + +  + E   T  +P FH +PK++K     RPI   HS   +  S ++ +  +                  ++     D    W + T DVV+ Y +++ +    N +    +HY P   S+I+   + +++ FV++N Y +F  +L+ Q + LAMGT SAP+LANI     ER+      Q +  + RYIDD   I   TE+   + ++ ++
Sbjct:  144 ENRLIVKLTDKNLGIAVFPKEWYIHENMKMLGDMTTYRMVNS----LDMEKL-----------LDRLLN--QLPKWSLPHNMERFVEAKTTTQVPVFHTIPKVHKEPWALRPIVPSHSWVTSRLSEVIDYLCRXXXXXXXXXXXXXXXXXNQLNEIRTDREDVW-ICTGDVVAFYTNIDAE-ACANLVQGGWQHYYPD--SKIHARKIAQMIRFVMQNNYFRFQNQLYQQIRGLAMGTASAPVLANIYAGYYERKQRIPWKQGVLKYMRYIDDVLMIFCGTEKELTEFIAEFK 415          
BLAST of mRNA_H-paniculata_contig37372.9844.1 vs. uniprot
Match: A0A162HZF7_9EURO (Reverse transcriptase n=1 Tax=Ascosphaera apis ARSEF 7405 TaxID=392613 RepID=A0A162HZF7_9EURO)

HSP 1 Score: 109 bits (273), Expect = 1.120e-22
Identity = 89/313 (28.43%), Postives = 146/313 (46.65%), Query Frame = 1
Query:   76 NEKQAPKWLKNQALEKSIVIKSTDKNLGCAIMERKWYMNECLRQLLDPTTYTSISSSNNILQCTKVKYGMHKDELHSLHTALNYHNTTAWMLKYIIHNYSETFSIPNFHIVPKINKPITVGRPIAAGHSAAITPRSALLCHWLQPVLDKLITVLKDSRTLIREMECTHFDNRSA----WTLVTADVVSLYPSLNVQQVITNTMIAIREHYGPSWSSQIYH---------FLERILNFVLKNGYLQFDGKLFLQHKCLAMGTPSAPILANITLAISERRL-LEKHSQIYLFRRYIDDTFCIVKDTERVTHQLLS 972
            N ++A +WL    L+ S + K TDKNLG A+    WYM      + D +TY  I   +        KY     +   L   L++ +    + K+I   Y     +P  H +PK++K     RPI   HS   T  S ++    +P+L K   VL  S+  I ++E       SA    W LV+ DV + Y ++      ++   ++ E YG  W+               +  ++ +V+   +  FDG ++ Q + LAMGTP+AP+LAN+  A  E +L + KH+++  + RY+DD F + K +E      L+
Sbjct:  511 NWRKARQWL----LDNSSMAKITDKNLGIAVFPTSWYMEGMQMLVSDKSTYKVIGPVDQ-----PPKYLSESHQCRLLKDRLHHWDLEPQLEKFI--RYKTRVQLPRLHGIPKVHKEPWKMRPIVPSHSWITTCVSQVVDFLCRPLLAKYPWVLISSKDFIVQLEKVRSKPSSATDDVW-LVSGDVEAFYTNIPP----SDCAFSVAEAYG-KWNIAAEQGRPHPPSPEIIASMIGYVMDKNFFAFDGTIYKQTRGLAMGTPAAPVLANVYAASIEEQLPILKHARLLYYGRYLDDIFLMYKGSEEELKSFLA 806          
BLAST of mRNA_H-paniculata_contig37372.9844.1 vs. uniprot
Match: A0A4S4LCZ9_9AGAM (Reverse transcriptase domain-containing protein n=1 Tax=Bondarzewia mesenterica TaxID=1095465 RepID=A0A4S4LCZ9_9AGAM)

HSP 1 Score: 107 bits (268), Expect = 4.800e-22
Identity = 89/313 (28.43%), Postives = 145/313 (46.33%), Query Frame = 1
Query:  115 LEKSIVIKSTDKNLGCAIMERKWYMNECLRQLLDPTTYTSISSSNN--ILQCTKVKYGMHKDELHSLHTALNYHNTTAWMLKYIIHNYSETFSIPNFHIVPKINKPITVGRPIAAGHSAAITPRSALLCHWLQPVLDKLITVLKDSRTLIREMECTHFDNRSAWTLVTADVVSLYPSLNVQQVITNTMIAIREHYGPSW------SSQIYHFLERILNFVLKNGYLQFDGKLFLQHKCLAMGTPSAPILANITLAISERRLLEKH----SQIYLFRRYIDDTFCIVKDTERVTH-QLLSLYQELDMKLTFDTT 1014
            L+   ++  TDKNLG A++ RKW++      L D   YT IS++    IL+ T+       D        L+      ++   I  +  +   +P F+ VPKI+K  T  RPI   HS A  P +  +   L+P+L +   VL+ S+ L + +   H D +    LV+ D+V+ YP++   +     M  + E Y  +W      S+   H   R L+   K+  + F  + FLQ K LAMG   +P LAN+  A  E  +L       +++  F R+IDD   +V    R    Q+    Q  D++L ++ +
Sbjct:  367 LKNEYIVTPTDKNLGAAVVTRKWFIENSKLLLSDTNNYTKISAAERQVILERTRTNVVAASDFADQF---LDNEQLVKFLRSKIPESELDESKVPVFYGVPKIHKTPTKMRPIVPCHSCAQGPAAKFVSKQLKPLLAERPYVLRGSKDLAQRISKLHLDPKRKKYLVSGDIVAFYPNIPADRC----MDIVYEWYK-TWALNHDVSAAEIHLFRRCLHLANKDLIIDFQDETFLQKKGLAMGVACSPDLANLFGAWHEEEILRTDEVLKTEMPFFGRFIDDVIGVVYANSREEALQIAKRVQYQDVELEWEAS 671          
BLAST of mRNA_H-paniculata_contig37372.9844.1 vs. uniprot
Match: A0A8C5PR15_9ANUR (Uncharacterized protein n=1 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5PR15_9ANUR)

HSP 1 Score: 99.4 bits (246), Expect = 1.250e-19
Identity = 95/324 (29.32%), Postives = 157/324 (48.46%), Query Frame = 1
Query:   55 FHSPISNNEKQAPKWLKNQALEKSIVIKSTDKNLGCAIMERKWYMNECLRQLLDPTTYTSISSSNNILQCTKVKYGMHKDELHSLHTALNYHNT-TAWMLKYIIHNYSETFSIPNFHIVPKINKPITV--GRPIAAGHSAAITPRSALLCHWLQPVLDKLITVLKDSRTLIREMECTHFDNRSAWTLVTADVVSLYPSLNVQQVITNTMIAIREHYGPSWSSQIYHFLERILNFVLKNGYLQFDGKLFLQHKCLAMGTPSAPILANITLAISERRLLEKHS----QIYLFRRYIDDTFCIVKDTERVTHQLLSLYQELDMKLTF 1005
            F   ++  EK+  ++LKN      +V+K TDK  G  +M R++Y+ E  R L D  TY  +++    +         +K+EL  L T        TA    ++   +SE   I  F+I+PKI+K +    GRPI +G  +  +  S  +  +LQPV+ K  + LKD+  ++R++E  +++  +     T DV SLY S+  Q+ +     A+ E  G     QI   L+ IL F+L++ +  F+ K +LQ    AMGT  AP  AN+ +   E   +   +     + L+RR+IDD   I K  ++   + +S        L F
Sbjct:   82 FKHNLTLKEKKRCEFLKNNF---DLVVKQTDKGGGVVVMSREYYLKEAHRLLDDNITYKVLANDPTAI---------YKEELRVLITEGKESGILTAKEFDFL---FSEFSVIALFYILPKIHKSLDAPPGRPIISGIDSQTSNLSKYIDFFLQPVVKKTRSYLKDTSHILRDLERINWE--AGMMFATIDVTSLYTSIPHQKGVEAIKRALDED-GSLSIDQIEFLLKSIL-FILEHNFFWFENKFYLQICGPAMGTRFAPSYANLYMHCWECDEIWPKAGMGASLVLWRRFIDDIIIIWKGGQQSLIEFISSLDNNPYNLKF 386          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig37372.9844.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00109BA0B34.520e-2734.06uncharacterized protein LOC114576718 n=1 Tax=Exaip... [more]
A0A4Q7KAQ3_METCM1.180e-2627.95Uncharacterized protein n=1 Tax=Pochonia chlamydos... [more]
A0A179EVJ5_METCM4.470e-2528.16Reverse transcriptase (RNA-dependent DNA polymeras... [more]
A0A8H8NDN4_9AGAM5.840e-2528.91Reverse transcriptase n=1 Tax=Ceratobasidium sp. A... [more]
A0A4S4L9S1_9AGAM1.590e-2331.08Uncharacterized protein n=1 Tax=Bondarzewia mesent... [more]
A0A4S4LT14_9AGAM3.910e-2331.08Uncharacterized protein n=1 Tax=Bondarzewia mesent... [more]
A0A0L1IKU6_ASPNO1.120e-2227.99Uncharacterized protein n=1 Tax=Aspergillus nomiae... [more]
A0A162HZF7_9EURO1.120e-2228.43Reverse transcriptase n=1 Tax=Ascosphaera apis ARS... [more]
A0A4S4LCZ9_9AGAM4.800e-2228.43Reverse transcriptase domain-containing protein n=... [more]
A0A8C5PR15_9ANUR1.250e-1929.32Uncharacterized protein n=1 Tax=Leptobrachium leis... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig37372contigH-paniculata_contig37372:1039..2070 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score120.6
Seed ortholog evalue1.5e-24
Seed eggNOG ortholog5286.M7WJ66
Hectar predicted targeting categoryother localisation
EggNOG OGs2CVN4@1,2RSCH@2759,38Y7D@33154,3P7RD@4751,3V71K@5204
Best tax levelBasidiomycota
Best eggNOG OGNA|NA|NA
Exons2
Model size1017
Cds size1017
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930150.71257-CDS-H-paniculata_contig37372:1038..17321622930150.71257-CDS-H-paniculata_contig37372:1038..1732Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig37372 1039..1732 -
1691481167.7950542-CDS-H-paniculata_contig37372:1038..17321691481167.7950542-CDS-H-paniculata_contig37372:1038..1732Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig37372 1039..1732 -
1622930150.726712-CDS-H-paniculata_contig37372:1747..20701622930150.726712-CDS-H-paniculata_contig37372:1747..2070Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig37372 1748..2070 -
1691481167.8114915-CDS-H-paniculata_contig37372:1747..20701691481167.8114915-CDS-H-paniculata_contig37372:1747..2070Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig37372 1748..2070 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig37372.9844.1prot_H-paniculata_contig37372.9844.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig37372 1039..2070 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig37372.9844.1

>prot_H-paniculata_contig37372.9844.1 ID=prot_H-paniculata_contig37372.9844.1|Name=mRNA_H-paniculata_contig37372.9844.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=339bp
MSLKTNVQKLWQNNTKEKFHSPISNNEKQAPKWLKNQALEKSIVIKSTDK
NLGCAIMERKWYMNECLRQLLDPTTYTSISSSNNILQCTKVKYGMHKDEL
HSLHTALNYHNTTAWMLKYIIHNYSETFSIPNFHIVPKINKPITVGRPIA
AGHSAAITPRSALLCHWLQPVLDKLITVLKDSRTLIREMECTHFDNRSAW
TLVTADVVSLYPSLNVQQVITNTMIAIREHYGPSWSSQIYHFLERILNFV
LKNGYLQFDGKLFLQHKCLAMGTPSAPILANITLAISERRLLEKHSQIYL
FRRYIDDTFCIVKDTERVTHQLLSLYQELDMKLTFDTT*
back to top

mRNA from alignment at H-paniculata_contig37372:1039..2070-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig37372.9844.1 ID=mRNA_H-paniculata_contig37372.9844.1|Name=mRNA_H-paniculata_contig37372.9844.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1032bp|location=Sequence derived from alignment at H-paniculata_contig37372:1039..2070- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGTCTCAAAACCAATGTTCAAAAACTATGGCAAAATAACACCAAGGA GAAGTTCCATTCTCCTATCAGTAATAATGAAAAACAAGCTCCGAAATGGC TTAAAAATCAAGCCTTAGAAAAAAGCATTGTTATCAAATCTACTGATAAA AACTTAGGCTGCGCCATTATGGAACGCAAATGGTACATGAACGAATGTCT GAGACAATTACTTGACCCCACTACGTACACCTCTATCAGCTCAAGTAATA ACATCCTACAATGCACCAAGGTGAAATATGGTATGCATAAAGATGAACTT CATAGCTTGCATACTGCACTGAAGTAAAGAAAGCATAGCTACCATAACAC CACAGCATGGATGCTCAAATATATCATTCACAACTACTCGGAGACTTTCT CCATCCCAAATTTTCACATTGTGCCCAAAATCAATAAGCCTATCACAGTT GGTAGACCAATTGCGGCAGGGCATAGCGCTGCTATCACCCCACGGTCAGC ATTACTATGCCACTGGCTCCAGCCAGTACTAGATAAGCTCATTACGGTAC TGAAAGACAGTCGTACACTAATCCGAGAAATGGAATGTACTCATTTTGAT AACAGATCCGCCTGGACGCTAGTAACCGCAGATGTGGTAAGCCTATATCC ATCACTGAATGTACAACAAGTTATCACAAACACAATGATAGCCATCAGAG AACACTACGGTCCCAGTTGGTCATCTCAAATATATCACTTTCTGGAACGA ATTTTGAACTTCGTTCTTAAGAATGGGTATTTACAATTTGATGGTAAATT ATTCCTACAACATAAATGCCTTGCAATGGGAACCCCAAGCGCTCCCATCC TGGCCAACATCACACTAGCGATAAGTGAACGTCGACTACTCGAAAAACAC TCGCAAATATATCTCTTTCGAAGATATATTGATGACACTTTCTGTATAGT AAAAGACACAGAACGAGTAACACATCAACTCCTATCATTATACCAAGAAC TCGACATGAAACTAACATTTGACACGACATAG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig37372:1039..2070-

>mRNA_H-paniculata_contig37372.9844.1 ID=mRNA_H-paniculata_contig37372.9844.1|Name=mRNA_H-paniculata_contig37372.9844.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2034bp|location=Sequence derived from alignment at H-paniculata_contig37372:1039..2070- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGTCTCAAAACCAATGTTCAAAAACTATGGCAAAATAACACCAAGGA
GAAGTTCCATTCTCCTATCAGTAATAATGAAAAACAAGCTCCGAAATGGC
TTAAAAATCAAGCCTTAGAAAAAAGCATTGTTATCAAATCTACTGATAAA
AACTTAGGCTGCGCCATTATGGAACGCAAATGGTACATGAACGAATGTCT
GAGACAATTACTTGACCCCACTACGTACACCTCTATCAGCTCAAGTAATA
ACATCCTACAATGCACCAAGGTGAAATATGGTATGCATAAAGATGAACTT
CATAGCTTGCATACTGCACTGAAATGAGTCTCAAAACCAATGTTCAAAAA
CTATGGCAAAATAACACCAAGGAGAAGTTCCATTCTCCTATCAGTAATAA
TGAAAAACAAGCTCCGAAATGGCTTAAAAATCAAGCCTTAGAAAAAAGCA
TTGTTATCAAATCTACTGATAAAAACTTAGGCTGCGCCATTATGGAACGC
AAATGGTACATGAACGAATGTCTGAGACAATTACTTGACCCCACTACGTA
CACCTCTATCAGCTCAAGTAATAACATCCTACAATGCACCAAGGTGAAAT
ATGGTATGCATAAAGATGAACTTCATAGCTTGCATACTGCACTGAACTAC
CATAACACCACAGCATGGATGCTCAAATATATCATTCACAACTACTCGGA
GACTTTCTCCATCCCAAATTTTCACATTGTGCCCAAAATCAATAAGCCTA
TCACAGTTGGTAGACCAATTGCGGCAGGGCATAGCGCTGCTATCACCCCA
CGGTCAGCATTACTATGCCACTGGCTCCAGCCAGTACTAGATAAGCTCAT
TACGGTACTGAAAGACAGTCGTACACTAATCCGAGAAATGGAATGTACTC
ATTTTGATAACAGATCCGCCTGGACGCTAGTAACCGCAGATGTGGTAAGC
CTATATCCATCACTGAATGTACAACAAGTTATCACAAACACAATGATAGC
CATCAGAGAACACTACGGTCCCAGTTGGTCATCTCAAATATATCACTTTC
TGGAACGAATTTTGAACTTCGTTCTTAAGAATGGGTATTTACAATTTGAT
GGTAAATTATTCCTACAACATAAATGCCTTGCAATGGGAACCCCAAGCGC
TCCCATCCTGGCCAACATCACACTAGCGATAAGTGAACGTCGACTACTCG
AAAAACACTCGCAAATATATCTCTTTCGAAGATATATTGATGACACTTTC
TGTATAGTAAAAGACACAGAACGAGTAACACATCAACTCCTATCATTATA
CCAAGAACTCGACATGAAACTAACATTTGACACGACATAGCTACCATAAC
ACCACAGCATGGATGCTCAAATATATCATTCACAACTACTCGGAGACTTT
CTCCATCCCAAATTTTCACATTGTGCCCAAAATCAATAAGCCTATCACAG
TTGGTAGACCAATTGCGGCAGGGCATAGCGCTGCTATCACCCCACGGTCA
GCATTACTATGCCACTGGCTCCAGCCAGTACTAGATAAGCTCATTACGGT
ACTGAAAGACAGTCGTACACTAATCCGAGAAATGGAATGTACTCATTTTG
ATAACAGATCCGCCTGGACGCTAGTAACCGCAGATGTGGTAAGCCTATAT
CCATCACTGAATGTACAACAAGTTATCACAAACACAATGATAGCCATCAG
AGAACACTACGGTCCCAGTTGGTCATCTCAAATATATCACTTTCTGGAAC
GAATTTTGAACTTCGTTCTTAAGAATGGGTATTTACAATTTGATGGTAAA
TTATTCCTACAACATAAATGCCTTGCAATGGGAACCCCAAGCGCTCCCAT
CCTGGCCAACATCACACTAGCGATAAGTGAACGTCGACTACTCGAAAAAC
ACTCGCAAATATATCTCTTTCGAAGATATATTGATGACACTTTCTGTATA
GTAAAAGACACAGAACGAGTAACACATCAACTCCTATCATTATACCAAGA
ACTCGACATGAAACTAACATTTGACACGACATAG
back to top