mRNA_H-paniculata_contig373.9829.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig373.9829.1
Unique NamemRNA_H-paniculata_contig373.9829.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig373.9829.1 vs. uniprot
Match: D7G3Z7_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3Z7_ECTSI)

HSP 1 Score: 273 bits (698), Expect = 1.820e-92
Identity = 124/139 (89.21%), Postives = 133/139 (95.68%), Query Frame = 1 
Query:    1 MSGIAQARLKEERKAWRRDHPIGFYAKPMYNDASKSTDIMKWECGLPGPEDTDWAGGLYKVTMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILDEDEGWRPAITIKQMLMGIHDLFDSPNPNSPAQSEAYQLFV 417
            MSGIA+ARL+EERKAWRRDHP+GF+AKPM  D S STD+++WECGLPGP DTDWAGGLY VTMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILDEDEGWRPAITIKQML+GIHDLFD+PNPNSPAQSEAYQLFV
Sbjct:    1 MSGIAEARLREERKAWRRDHPVGFHAKPMLKDDS-STDLLRWECGLPGPADTDWAGGLYTVTMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILDEDEGWRPAITIKQMLLGIHDLFDTPNPNSPAQSEAYQLFV 138
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BLAST of mRNA_H-paniculata_contig373.9829.1 vs. uniprot
Match: A0A7S2Y0C7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0C7_9STRA)

HSP 1 Score: 243 bits (621), Expect = 1.440e-80
Identity = 106/137 (77.37%), Postives = 125/137 (91.24%), Query Frame = 1 
Query:    7 GIAQARLKEERKAWRRDHPIGFYAKPMYNDASKSTDIMKWECGLPGPEDTDWAGGLYKVTMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILDEDEGWRPAITIKQMLMGIHDLFDSPNPNSPAQSEAYQLFV 417
            GIA+ RL EERKAWR+DHP GFYA+PM +D   ST++MKWECG+PGPE TDW GG+YK+TMEF+E+YPSKPPKCKFVPPLFHPNVYPSGT+CLSIL+E+E WRPAITIKQML+GI DL D+PNPNSPAQS+AYQL++
Sbjct:   13 GIARGRLIEERKAWRKDHPYGFYARPMMSD-DNSTNLMKWECGMPGPEGTDWEGGMYKLTMEFSEEYPSKPPKCKFVPPLFHPNVYPSGTVCLSILNEEEDWRPAITIKQMLLGIQDLLDNPNPNSPAQSDAYQLYI 148
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BLAST of mRNA_H-paniculata_contig373.9829.1 vs. uniprot
Match: A0A835YNI1_9STRA (Ubiquitin conjugating enzyme n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNI1_9STRA)

HSP 1 Score: 240 bits (612), Expect = 2.510e-79
Identity = 105/137 (76.64%), Postives = 125/137 (91.24%), Query Frame = 1 
Query:    7 GIAQARLKEERKAWRRDHPIGFYAKPMYNDASKSTDIMKWECGLPGPEDTDWAGGLYKVTMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILDEDEGWRPAITIKQMLMGIHDLFDSPNPNSPAQSEAYQLFV 417
            GIA+ARL EERKAWR+DHPIGFYA+P+ N    S ++MKW+CG+PG   +DWAGG+YK++MEFT++YPSKPPKCKFVPPLFHPNVYPSGT+CLSIL+ED+GWRPAITIKQML+GI DL D+PNPNSPAQSEAYQ+FV
Sbjct:    4 GIARARLAEERKAWRKDHPIGFYARPVSNP-DNSMNLMKWDCGIPGVASSDWAGGVYKLSMEFTDEYPSKPPKCKFVPPLFHPNVYPSGTVCLSILNEDDGWRPAITIKQMLLGIQDLLDNPNPNSPAQSEAYQMFV 139
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BLAST of mRNA_H-paniculata_contig373.9829.1 vs. uniprot
Match: A0A448ZL65_9STRA (UBC core domain-containing protein n=2 Tax=Bacillariaceae TaxID=33852 RepID=A0A448ZL65_9STRA)

HSP 1 Score: 235 bits (600), Expect = 1.530e-77
Identity = 106/138 (76.81%), Postives = 121/138 (87.68%), Query Frame = 1 
Query:    4 SGIAQARLKEERKAWRRDHPIGFYAKPMYNDASKSTDIMKWECGLPGPEDTDWAGGLYKVTMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILDEDEGWRPAITIKQMLMGIHDLFDSPNPNSPAQSEAYQLFV 417
            SGIA+ RL EERKAWRRDHP GFYA+P  +    S+DIMKWE G+PG E TDW  G++KV+MEF+EDYPSKPPKCKFVPPLFHPNVYPSGTICLSIL+E+EGWRPAIT+KQ+L+GI DL D PNPNSPAQSEAYQLF+
Sbjct:    3 SGIARGRLVEERKAWRRDHPFGFYARPT-SKGDGSSDIMKWEAGIPGKEGTDWENGVFKVSMEFSEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEEEGWRPAITLKQVLIGIQDLLDDPNPNSPAQSEAYQLFI 139
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BLAST of mRNA_H-paniculata_contig373.9829.1 vs. uniprot
Match: A0A7S3ZX43_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZX43_9STRA)

HSP 1 Score: 234 bits (596), Expect = 6.020e-77
Identity = 104/139 (74.82%), Postives = 122/139 (87.77%), Query Frame = 1 
Query:    1 MSGIAQARLKEERKAWRRDHPIGFYAKPMYNDASKSTDIMKWECGLPGPEDTDWAGGLYKVTMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILDEDEGWRPAITIKQMLMGIHDLFDSPNPNSPAQSEAYQLFV 417
            M+GIA+ RL EERKAWRRDHP GF+A+P  +    +T++M W+ G+PG + TDW GGL+KV MEF+EDYPSKPPKCKFVPPLFHPNVYPSGTICLSIL+E+EGWRPAITIKQML+GI DL D+PNPNSPAQSEAYQ+FV
Sbjct:    1 MAGIARGRLSEERKAWRRDHPFGFFARPS-SSGDGATNLMSWDAGVPGKKGTDWEGGLFKVRMEFSEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEEEGWRPAITIKQMLLGIQDLLDTPNPNSPAQSEAYQMFV 138
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BLAST of mRNA_H-paniculata_contig373.9829.1 vs. uniprot
Match: A0A6U0IJL9_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0IJL9_9STRA)

HSP 1 Score: 232 bits (592), Expect = 2.710e-76
Identity = 104/137 (75.91%), Postives = 121/137 (88.32%), Query Frame = 1 
Query:    7 GIAQARLKEERKAWRRDHPIGFYAKPMYNDASKSTDIMKWECGLPGPEDTDWAGGLYKVTMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILDEDEGWRPAITIKQMLMGIHDLFDSPNPNSPAQSEAYQLFV 417
            GIA+ RL EERK WRRDHP GFYA+P  +    S+++MKW  G+PG E+TDW+GG+YKVT+EF+E+YPSKPPKCKFVPPLFHPNVYPSGTICLSIL+E+EGWRPAITIKQML+GI DL D PNPNSPAQSEAYQLF+
Sbjct:    4 GIARGRLAEERKNWRRDHPFGFYARPE-SKGDGSSNLMKWATGIPGKENTDWSGGVYKVTLEFSEEYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEEEGWRPAITIKQMLLGIQDLLDDPNPNSPAQSEAYQLFM 139
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BLAST of mRNA_H-paniculata_contig373.9829.1 vs. uniprot
Match: B8BY49_THAPS (Ubiquitin conjugating enzyme n=2 Tax=Thalassiosirales TaxID=33847 RepID=B8BY49_THAPS)

HSP 1 Score: 232 bits (592), Expect = 2.800e-76
Identity = 103/138 (74.64%), Postives = 121/138 (87.68%), Query Frame = 1 
Query:    4 SGIAQARLKEERKAWRRDHPIGFYAKPMYNDASKSTDIMKWECGLPGPEDTDWAGGLYKVTMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILDEDEGWRPAITIKQMLMGIHDLFDSPNPNSPAQSEAYQLFV 417
            SGIA+ RL EERKAWRRDHP GFYA+P+ +    S+D+MKWE G+PG E TDW  G+YKV +EF+++YPSKPPKCKFVPPLFHPNVYPSGTICLSIL+E+EGWRPAIT+KQML+GI DL D+PNPNSPAQSEAY LF+
Sbjct:    4 SGIARGRLAEERKAWRRDHPYGFYARPV-SRGDGSSDLMKWETGIPGKEGTDWESGVYKVMLEFSDEYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEEEGWRPAITVKQMLLGIQDLLDTPNPNSPAQSEAYNLFI 140
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BLAST of mRNA_H-paniculata_contig373.9829.1 vs. uniprot
Match: A0A7S4AH06_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AH06_9STRA)

HSP 1 Score: 231 bits (590), Expect = 5.110e-76
Identity = 104/138 (75.36%), Postives = 120/138 (86.96%), Query Frame = 1 
Query:    4 SGIAQARLKEERKAWRRDHPIGFYAKPMYNDASKSTDIMKWECGLPGPEDTDWAGGLYKVTMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILDEDEGWRPAITIKQMLMGIHDLFDSPNPNSPAQSEAYQLFV 417
            SGIA+ RL EERKAWRRDHP  FYA+P  +    S+DIMKWE G+PG E TDW  G++KV+MEF+EDYPSKPPKCKFVPPLFHPNVYPSGTICLSIL+E+EGWRPAIT+KQ+L+GI DL + PNPNSPAQSEAYQLF+
Sbjct:    3 SGIARGRLAEERKAWRRDHPFAFYARPT-SKGDGSSDIMKWEAGIPGKEGTDWENGVFKVSMEFSEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEEEGWRPAITLKQVLIGIQDLLNDPNPNSPAQSEAYQLFI 139
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BLAST of mRNA_H-paniculata_contig373.9829.1 vs. uniprot
Match: A0A7S4HWQ1_9STRA (Hypothetical protein n=3 Tax=Eupodiscales TaxID=33838 RepID=A0A7S4HWQ1_9STRA)

HSP 1 Score: 232 bits (592), Expect = 1.020e-75
Identity = 105/138 (76.09%), Postives = 120/138 (86.96%), Query Frame = 1 
Query:    4 SGIAQARLKEERKAWRRDHPIGFYAKPMYNDASKSTDIMKWECGLPGPEDTDWAGGLYKVTMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILDEDEGWRPAITIKQMLMGIHDLFDSPNPNSPAQSEAYQLFV 417
            +GIA+ RL EERK WRRDHP GFYA+P  +    STD+MKWE G+PG E TDWA G+YKVT+EF+E+YPSKPPKCKFVPPLFHPNVYPSGTICLSIL+E+EGWRPAITIKQML+GI DL D PNPNSPAQSEAY L++
Sbjct:   42 AGIARGRLVEERKNWRRDHPFGFYARPT-SKGDGSTDLMKWESGVPGKEGTDWATGVYKVTLEFSEEYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEEEGWRPAITIKQMLLGIQDLLDDPNPNSPAQSEAYNLYM 178
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BLAST of mRNA_H-paniculata_contig373.9829.1 vs. uniprot
Match: A0A6U3QUR4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3QUR4_9STRA)

HSP 1 Score: 231 bits (588), Expect = 1.180e-75
Identity = 102/137 (74.45%), Postives = 121/137 (88.32%), Query Frame = 1 
Query:    7 GIAQARLKEERKAWRRDHPIGFYAKPMYNDASKSTDIMKWECGLPGPEDTDWAGGLYKVTMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILDEDEGWRPAITIKQMLMGIHDLFDSPNPNSPAQSEAYQLFV 417
            GIA+ RL +ERKAWR+DHP GF+AKP+ +    ST++MKWECG+PG + T W GGL+ VTM+FT++YPSKPPKCKFVPPLFHPNVYPSGTICLSIL+E+E WRPAITIKQML+GI DL D+PNPNSPAQS+AYQLFV
Sbjct:    5 GIAKGRLSQERKAWRKDHPYGFFAKPL-SSQDGSTNLMKWECGIPGKKSTGWEGGLFTVTMDFTDEYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEEEDWRPAITIKQMLVGIQDLLDNPNPNSPAQSDAYQLFV 140
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig373.9829.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3Z7_ECTSI1.820e-9289.21UBC core domain-containing protein n=2 Tax=Ectocar... [more]
A0A7S2Y0C7_9STRA1.440e-8077.37Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835YNI1_9STRA2.510e-7976.64Ubiquitin conjugating enzyme n=1 Tax=Tribonema min... [more]
A0A448ZL65_9STRA1.530e-7776.81UBC core domain-containing protein n=2 Tax=Bacilla... [more]
A0A7S3ZX43_9STRA6.020e-7774.82Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A6U0IJL9_9STRA2.710e-7675.91Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
B8BY49_THAPS2.800e-7674.64Ubiquitin conjugating enzyme n=2 Tax=Thalassiosira... [more]
A0A7S4AH06_9STRA5.110e-7675.36Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S4HWQ1_9STRA1.020e-7576.09Hypothetical protein n=3 Tax=Eupodiscales TaxID=33... [more]
A0A6U3QUR4_9STRA1.180e-7574.45Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig373contigH-paniculata_contig373:3791..10264 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score275.8
Seed ortholog evalue1.1e-71
Seed eggNOG ortholog2880.D7G3Z7
Preferred namehus5
KEGG koko:K10577
KEGG Pathwayko03013,ko04064,ko04120,ko05206,map03013,map04064,map04120,map05206
KEGG ModuleM00427
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000022,GO:0000070,GO:0000122,GO:0000226,GO:0000228,GO:0000278,GO:0000280,GO:0000785,GO:0000790,GO:0000792,GO:0000793,GO:0000794,GO:0000795,GO:0000819,GO:0001101,GO:0002178,GO:0003006,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005694,GO:0005720,GO:0005737,GO:0005783,GO:0005789,GO:0005829,GO:0006066,GO:0006355,GO:0006357,GO:0006464,GO:0006508,GO:0006511,GO:0006629,GO:0006643,GO:0006644,GO:0006665,GO:0006667,GO:0006670,GO:0006672,GO:0006684,GO:0006686,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007052,GO:0007059,GO:0007275,GO:0008134,GO:0008150,GO:0008152,GO:0008610,GO:0008641,GO:0008654,GO:0009056,GO:0009057,GO:0009058,GO:0009719,GO:0009725,GO:0009737,GO:0009790,GO:0009791,GO:0009793,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010033,GO:0010154,GO:0010468,GO:0010506,GO:0010508,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010629,GO:0012505,GO:0016020,GO:0016043,GO:0016239,GO:0016241,GO:0016604,GO:0016605,GO:0016740,GO:0016874,GO:0016877,GO:0016925,GO:0017059,GO:0018193,GO:0018205,GO:0019219,GO:0019222,GO:0019538,GO:0019637,GO:0019751,GO:0019787,GO:0019789,GO:0019899,GO:0019904,GO:0019941,GO:0019948,GO:0022402,GO:0022414,GO:0030148,GO:0030163,GO:0031211,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031329,GO:0031331,GO:0031399,GO:0031401,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0031984,GO:0032268,GO:0032270,GO:0032446,GO:0032501,GO:0032502,GO:0032991,GO:0033233,GO:0033235,GO:0033993,GO:0034311,GO:0034312,GO:0034641,GO:0035339,GO:0036211,GO:0042175,GO:0042221,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043603,GO:0043604,GO:0043632,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0044388,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0045892,GO:0045934,GO:0046165,GO:0046173,GO:0046467,GO:0046511,GO:0046512,GO:0046513,GO:0046519,GO:0046520,GO:0048285,GO:0048316,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051231,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051276,GO:0051338,GO:0051347,GO:0051603,GO:0060255,GO:0061458,GO:0061650,GO:0061656,GO:0065007,GO:0065009,GO:0070013,GO:0070647,GO:0071535,GO:0071704,GO:0071840,GO:0080090,GO:0090407,GO:0097164,GO:0097305,GO:0098796,GO:0098813,GO:0098827,GO:0099086,GO:0140014,GO:0140096,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901617,GO:1901700,GO:1902494,GO:1902679,GO:1902850,GO:1903047,GO:1903182,GO:1903320,GO:1903322,GO:1903506,GO:1903507,GO:1903755,GO:1904502,GO:1904504,GO:1905961,GO:1990234,GO:1990356,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.protein modification by small protein conjugation
EggNOG OGsCOG5078@1,KOG0424@2759
Ec32 ortholog descriptionUbiquitin-conjugating enzyme/RWD-like
Ec32 orthologEc-19_000670.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019,ko04121
Exons5
Model size420
Cds size420
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig373.9829.1prot_H-paniculata_contig373.9829.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig373 3791..10264 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930149.2587187-CDS-H-paniculata_contig373:3790..39231622930149.2587187-CDS-H-paniculata_contig373:3790..3923Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig373 3791..3923 -
1691481167.0486457-CDS-H-paniculata_contig373:3790..39231691481167.0486457-CDS-H-paniculata_contig373:3790..3923Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig373 3791..3923 -
1622930149.2769108-CDS-H-paniculata_contig373:4975..50461622930149.2769108-CDS-H-paniculata_contig373:4975..5046Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig373 4976..5046 -
1691481167.0620973-CDS-H-paniculata_contig373:4975..50461691481167.0620973-CDS-H-paniculata_contig373:4975..5046Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig373 4976..5046 -
1622930149.2946227-CDS-H-paniculata_contig373:6806..68751622930149.2946227-CDS-H-paniculata_contig373:6806..6875Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig373 6807..6875 -
1691481167.071315-CDS-H-paniculata_contig373:6806..68751691481167.071315-CDS-H-paniculata_contig373:6806..6875Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig373 6807..6875 -
1622930149.3094509-CDS-H-paniculata_contig373:7815..78961622930149.3094509-CDS-H-paniculata_contig373:7815..7896Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig373 7816..7896 -
1691481167.080727-CDS-H-paniculata_contig373:7815..78961691481167.080727-CDS-H-paniculata_contig373:7815..7896Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig373 7816..7896 -
1622930149.328745-CDS-H-paniculata_contig373:10198..102641622930149.328745-CDS-H-paniculata_contig373:10198..10264Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig373 10199..10264 -
1691481167.0949001-CDS-H-paniculata_contig373:10198..102641691481167.0949001-CDS-H-paniculata_contig373:10198..10264Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig373 10199..10264 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig373.9829.1

>prot_H-paniculata_contig373.9829.1 ID=prot_H-paniculata_contig373.9829.1|Name=mRNA_H-paniculata_contig373.9829.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=140bp
MSGIAQARLKEERKAWRRDHPIGFYAKPMYNDASKSTDIMKWECGLPGPE
DTDWAGGLYKVTMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILDE
DEGWRPAITIKQMLMGIHDLFDSPNPNSPAQSEAYQLFV*
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mRNA from alignment at H-paniculata_contig373:3791..10264-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig373.9829.1 ID=mRNA_H-paniculata_contig373.9829.1|Name=mRNA_H-paniculata_contig373.9829.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6474bp|location=Sequence derived from alignment at H-paniculata_contig373:3791..10264- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGCGGGATCGCACAGGCTCGACTGAAAGAGGAGCGAAAGGCTTGGCG
CAGGGACCACCCCATTGTAAGTGATAACTTGGTTGTTCGGGTTCAGCTAT
TTACCTTTGTGGGTATGGGATATGGAAGAGGTCGTTGTTGGTGTGATGTG
ACGCTGCTCTCGTCAGCTCGCCGACTAATTTATATTGCCAAGGAATCAGG
GAATCATGGAGTCATCCACGCTATATACAGTCTGAACCCCAATGAGTGAG
ATATTTATAGGCAAAAAACCTTGAACGGGTCAGTCACACTCATGCCGATT
TTAGGAGTTTGTACTCGAATTATCAAAGAGATGAAGGCATCGTAAATACA
ACGATTTCAAAACTTCCACTGATGGTGTCTTCGGTCAAAATATTCTTTAT
TTGAATGATATTTCATGATTTTCCGGGTTAGAGATCCGTTCATATCTCCA
AAAAAAAAGAGAAAAATACCAACAGCACCGTTCGCCAAAATCTTTGTGTT
AAGATGTGCTCATTTCAAAAATTCAAATCGAAACACCTTAAATAGGCATG
GGAATGACCCGTTCTGGGTTTTTTGGGTCATTCAGTCTACTCATGGTATA
ATAGCTGAAAATTCGTCACAATGTCCTCGTAATCGGAACGGACACCTCGG
CGATACCAATGCATTCACCTCCAATGTTTGGCTGAAATCTCTGAAATTTG
GGGCTGGAATGGCCAATCAGTGGGGAAGCCCAAATTCCATACATTTTTGT
TGGTGTTTTCTCTATTCTTGTTGTACATTCAAACCGTTTGAATTCGTCAA
CAGTGAGCTCGTCGTCCCGGAACGTAGTCCACCTACATCAACATCTCGTT
ACAAAATGAATCCCTTGTTACAACCAGTGACAAATTCGTCTCTCTCGTGG
AACCTACGAATTTTGAAAAAAAATTCCTTCCATCACGAGACGTTGTTGTG
CGTAATATCTGGGGTTTGGAGGGTGCTCGCGACGAACAGCTCGCTGTTAG
CTACCACATATATGACCAAACCGAAATTTGCAAAAACAATTCATTTTGCT
CAAACCCCTTGAGCAAGACCCTCAGGGGTGAAGGAGTTTAAAGCTCCCAA
AAACAATATGGTGTAACTTATCTTGTAGCGCCTAACTAAGGAGAGAGTCA
CACGCCAACGTTTGCTCACTTATGTATGTTCACTTTTCATTCCAATTCAG
TAATATGTCCCCGCCACGCTGCTGCCGTGCAACTAGCGAGGCAATCGGGC
CCTGCGCACCCATGGACAAAGTTCTGTCTCCCTACCAAACCTTCAAGAAG
AAAGTTCTGACCTTCCTGGTCAGCTAGTAGTGTGTAGTACTTGGTTCACT
ATTTGACCGTTACAACAAGCCGGTGTTCGGTCGTTCATTCTCGCTGTACA
ATATTATGCATCTAAAATAAACGCTCTGAAAACGGCAACAAACGGACCTT
CTTTTGCACATGAGATGCACTGACCAGCTCTAGATTTATTGCTGGTTAAG
GCATCGCGTCGACGTCTTTTGGCTGTTACGATGCCCGATTCCTAAAGGAT
TAACCCCCTCGGCGCTGGCTTCCATGTACAATGGTTGGCGTATTCGTCAC
GAAGATTAAGAAGTATTTGCCTGAGTTTCAGAATAAGCTCGTGCATTCTA
TGTGCTCCGGACCATCCACGACTGCTAATAGTACTCGTAAATCGAATAGA
CAGGGGTGGGTACTTTATTCTATGTACCCACTCATTCTGAAGCCCAAGCG
AATACTTTTAATTTTGGGGGGGGGGTACGCCAATTGTGTATATTTGTCCA
GGGGGGTGAAACTTTGCCACGGTACCCACTACCAGTAATTACTACAGTAA
TTTAACATGGATCACAGAGAGAACAAAGCTGCAGTGAACCAGGTCACGGC
GTACTTGCTGCGCCAGCATGGTAGACAGCCCAATACGGCACACAAAGCTG
ATGACCTCAAAACGTTTGCCTGCCTGTAGATGCTCGCTGCTGCTGTCAAA
CCTGTACCTTCTGTACAGACATTGGATGCGTTGGTTGCTACTGAACTACA
TGGCACCGAACAAGTAGGACTAGACTCGCGCTTATGCCCATGAGACACGC
GTGCTCGTATAGTTTGATTCACGCGCCAAGATGGAGGTCCACCTTAGTGT
GTGAATCAATCTATACTCCACCTTGGCGCGTGAATCAAACTACACGAGCA
CGCATGTCTCGTGGCGCATAAGCGTGGGATGTCGAAAGGCGCTGACATCG
CATGTCTACAAGATCAGTTTGTCAGCTCGCTCTATTAATTTGTTTTGCTT
CATTCCAAAACACGTTCAATTAATTTTCCCCCAATATTTATTTTCACTGC
CTTTGCCGTTTGAAATAGGGCTTCTATGCGAAGCCTATGTACAACGACGC
CAGCAAGTCTACCGACATAATGAAGTGGGAGTGTGGGCTCCCTGGACCAG
TGAGTGATTTGTGATTGGTCAACGTTTCCGCTGTACCTCTATTCGATCGG
ACAACAAACGTGTCCTCTGCGTGTGGATGTTTGACTGGTCGATATATGTC
CATTCCATTGGGTGTTTGATCGGCTAAAGTGTCCTCTGTTTGTGGACGTT
CGATTGGTCGATATGCGTCCGTTCTAATCGGTGTTTGATAGGCTGACGTA
TCCTGTTTGTGGACGCTCTATTGGTCAAAATAACTCCGTTCTATACGTTC
GTATGATTTGTCAACATGTCTGCTGTGGACATTCGATTGGTCAAGATACG
TGCGTTCTCTTTGGTGTTTGATTGGCCAAAGTATTCTTTGTGTTTAGGTG
TTCGATCGGCCAATATATGTGCGTTTTTATCGGTGGTGCTTGATCGGCCA
ACGTATCCTCTGTATTTGGACGTTCGATTGGTCAGTATACGTGCGTTGTA
TTCGATATTGCATTGGTTGACGTATACTCTGTATTTGGATGTACGATTGG
TCAACATGTGTTCGTTCTATACGTTCGTTTGATTTGTCAATGCGTCCTCT
GTATTTAGAGGAATGTACCCCCACAATAAGTTATTCGAAAGTTGGCCATT
GCGGAGAAATAAAACGCGTAATAAGCACGGAGGTGTAGTCGGTTTAGCAG
CTTTTTTTCCGGTGACGGAGGGCGGGGGGTAGATGGCCGCAGTGACTTGT
TATGATGGTGATGCTGTCATGATGTTGATCATTGTGCTGTTCACCGATTC
GATAAGTATGATGCGGAACGCTTTTGCCGGCAGAGAAAAAAAAGCGATAC
AATGTATTTTTTATCATGTTTTTCGTTCATCAGTTCGGAAACCTACTCAC
CGTGTTGTGGTGTTACTTTCGTTGTTCACGCAAGAAAATGGCTTTTTTTT
TTTTTTTTGCGCAAATTTTACCTTATTGGAAAATTACAGGAGGACACTGA
TTGGGCGGGAGGCTTGTACAAGGTCACCATGGAGTTTACTGAGGACTACC
CATCCAAGGTACTGTATCTACTCTGTACACCTAAAATGTCGTCCTACAAT
AGGTGGTAGGGTGCCTAATTATGGGGTAGAGTACCTCCTTTCTCCAGGGT
TAACACGATCAATAGAGTGCCATGCTCCAAAAGCAACCCTGCAGGAATAC
TGACAAACTGTTCGTTTTGCTGCAGGGTGTCATACTCCACATGATGAACG
ACGAAGATGTATGACGGTATTGATGCCGGGGCACTTGGAGGGTGTTCAAC
TTAAAGAGCTGTGTCATGCTAAGATCATTTCCGAATAAAAGAATGCCTCT
GCTGTTCCTACAAACAACGAGTCAGGGTAATCGCCGGAGAGTAGTCTTTG
GGGGAGGAAAGAGGGAATCGTGAGTAGAAATTTGAACTGTACGTTGGATT
TTGAATGTCTTGTCCATCTCGTGTCGTCTCGAGTATATTCTTACTGTTGT
GTTTTCGAAAAATTGAACGTTAACGACAGGCCAAAATCAGACGTGCGTGC
TCGCAAGATAATCAAACCTTCTAGAATGTTGTATTTAGGAAAATGGAGCA
TGTTTCTTGTTTCTTGAGAGTGGTCGATGTTCTGACAACGTTGAATGCCC
CCCCCCCCCCTGAAAAATGACAAACGCGAATACTTGGGGGCATTCACAAT
GAGAGTTACGTAGTATTCCCCTGACGGTTCAAAGTATTTGGTCGCGTGAG
ATAAAGTGTTGAGCTTTATTTGTTCGTTTCACTGTTATTCGGAGTGGAGT
GGTCGTAGATGGTCCGGGACACAGGAAATTGAACGTGCCCATGCTTGAGG
CGAACTCTTCAATATGATTCGTCACGAACGCTTGAAGTATTCGTGTTTGC
TATTATTTTCCGGGGGGTGCGCTGTTTTGCAACGGTTGTTATAAATACGC
CTTGCCTTGCACATACATGTACACCCTTTCACACGTTTCGGAAGGTCGAT
CTGGCTGTTTTGAGCACGTACATGTTGTTATCATACCCCGTTGCCACATT
TGTTGTAAAATTGACAATTGATGCGCTAGGGCTTGATCCGTCGTATGTGT
GAAAATTTTGCCCTCCTATCCAACATTGTAGGACAATGCCTTGCCAAGGG
CTTCGACCAGAAAATAAGGCGCGATATATTGCGGGAATATCACAGTACAA
TTCCCCCGGGGTCGCTTTTCTGTGTAGAACATGCGAACGACTTTAATTAG
CCCACGTTGATCGCTTTGTCAAGGGCTTTGAACACGATTAATGTGCCCAT
TTTTGACCCTCGTCTATCAATCTTTTGCACGACAATTGACCATCATTGTC
GTGACGAAACACACTCTTTCCGGTGTTTTGTTTTGGTCCTTAAAGAAATG
GACATAACACCATTCGGTTAACGTCTGTCTGATGAACAGGATCCTTATCG
GAGTTGCCAGCATTTAACCTTGAGGTATTGTTTATCCGGATCCGGCAAAA
TGACAAAACAATAATCATAATCATAATCATAATCATAATCATAATAATAA
TAATAATAAATATTAATAATAATAATCATAATCATAATCATAATCATAAT
CATAATCATAATCATAATCATAATCATAATCATAATCATAATCATAATCA
TAATCATAATCATAATCATAATCATAATCATAATCATAATAATATTAATA
TTAATATTAATAATAACAATAATAACAACAATAACAATAATATTAATAGC
TCTTATTTTTGCTCCTGCGGCTCTGTTCGTCTTATTCCGGGTTTTCTCTC
CCTCCCCCCCGGTGTCAGCCTCCAAAGTGCAAGTTCGTCCCGCCGCTGTT
CCATCCCAACGTCTATCCGTCGGGCACCATCTGTCTCAGGTAACGATACC
AAACAAGGACCAATTTACCCAGGTAGTATTTTCGCTTTTTGCTAACGAAC
GGTCCTCTGTGTGAAAGGTTCAGTGAACACTAGTTTTTTGTCGCATGTTG
GTACAACTTGTGCCACATTCAAATTGTGGCTCTTCATATCTTGCTTTTTT
TTTTTTTTCTTTTTTTTCAATCGTTGATCCTGCAGTGATACAACCATTGA
GAATAGTCAATTCAAACAGACCCCTGCAGGTATCTTTGCGGGCTATGCTA
CTGTTGTAACCCCTATGATGATCCTTGTACAGTATGCTGATTTTACTGTA
AAGTTGGATCGAGGTGTGTCCTAGTCCAATATCACGTGTCCACCGGTGAG
AGATTTCACGTGCAAAGCTGTTGTCATTACATTTCATCTCGAGTTAGTAG
AGAAATTTTGAATATTTAGTCATGATCTCTTTCGCAGTGATGTGCCACCG
CTATTTAAGTGAGCCGTTGAGTGGGCCATGGATCTGTGGATAATGACATT
ACATAAGTACAGGCACAAAATAGTAGAGTATGACTTCACCAGCGTAGCCG
TGGCTTTACCTAGAAATGAATTACACCGCCACATGGCCATTCATCCTGAA
GTATCCTCGTTGTCGGCGCGCTTATGGGGCCTTACGGGGTAATCTCATTA
GTACCAGGTGCAGCATGAAAATATAAAAATATTCGGGCAGGTGTCGTTTT
CCCTCGACGTTACGGTACCCTCTTCCCGCAGGCCGCGTGTTTTGCGTGAT
CTACGATTCGTTCGTGCTTTCGCGTTTTGAATGTTTAGTTCTGGTTGTTT
TTACCGCAAGAGTATAATCGAGTAGTGGCTTGTAGTAGATTCCGGTATAT
AGAGGTGCTAGAGAGGCACGCGCAATTCCTGCGTTGCTTGTGCACTTCAT
TGTGGGTTTGACACTGTTAGCTCGGACCTTCACCATATTAAATAGCATAT
ATTTTTTTGTTCTCTGATTTAATTTTATTTTTATCTTACTCGTGGCATTG
AACGTTTCTCTGCTCGACGTTTCGTTGGTTGTTTTTGGCAGTATTCTTGA
TGAAGACGAGGGATGGAGGCCTGCGATAACCATTAAGCAGATGCTCATGG
GAATCCACGACCTCTTCGACTCTCCGAACCCCAACAGCCCAGCGCAATCC
GAGGCCTACCAGCTCTTCGTGTAA
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Coding sequence (CDS) from alignment at H-paniculata_contig373:3791..10264-

>mRNA_H-paniculata_contig373.9829.1 ID=mRNA_H-paniculata_contig373.9829.1|Name=mRNA_H-paniculata_contig373.9829.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=840bp|location=Sequence derived from alignment at H-paniculata_contig373:3791..10264- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGCGGGATCGCACAGGCTCGACTGAAAGAGGAGCGAAAGGCTTGGCG
CAGGGACCACCCCATTATGAGCGGGATCGCACAGGCTCGACTGAAAGAGG
AGCGAAAGGCTTGGCGCAGGGACCACCCCATTGGCTTCTATGCGAAGCCT
ATGTACAACGACGCCAGCAAGTCTACCGACATAATGAAGTGGGAGTGTGG
GCTCCCTGGACCAGGCTTCTATGCGAAGCCTATGTACAACGACGCCAGCA
AGTCTACCGACATAATGAAGTGGGAGTGTGGGCTCCCTGGACCAGAGGAC
ACTGATTGGGCGGGAGGCTTGTACAAGGTCACCATGGAGTTTACTGAGGA
CTACCCATCCAAGGAGGACACTGATTGGGCGGGAGGCTTGTACAAGGTCA
CCATGGAGTTTACTGAGGACTACCCATCCAAGCCTCCAAAGTGCAAGTTC
GTCCCGCCGCTGTTCCATCCCAACGTCTATCCGTCGGGCACCATCTGTCT
CAGCCTCCAAAGTGCAAGTTCGTCCCGCCGCTGTTCCATCCCAACGTCTA
TCCGTCGGGCACCATCTGTCTCAGTATTCTTGATGAAGACGAGGGATGGA
GGCCTGCGATAACCATTAAGCAGATGCTCATGGGAATCCACGACCTCTTC
GACTCTCCGAACCCCAACAGCCCAGCGCAATCCGAGGCCTACCAGCTCTT
CGTGTAATATTCTTGATGAAGACGAGGGATGGAGGCCTGCGATAACCATT
AAGCAGATGCTCATGGGAATCCACGACCTCTTCGACTCTCCGAACCCCAA
CAGCCCAGCGCAATCCGAGGCCTACCAGCTCTTCGTGTAA
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