mRNA_H-paniculata_contig37178.9805.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig37178.9805.1
Unique NamemRNA_H-paniculata_contig37178.9805.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig37178.9805.1 vs. uniprot
Match: W8BWJ0_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8BWJ0_CERCA)

HSP 1 Score: 203 bits (516), Expect = 1.730e-54
Identity = 120/345 (34.78%), Postives = 190/345 (55.07%), Query Frame = 1
Query:    1 PKSAAESLKGPEAEKWRMAMKEQWGALVNNGTCESEDLGRLPAGRKAIRTKWIFKRKLKKDGSVARYKARLVAQDFSEVESEDFFETSAPVARMST-----------------------------KEELFVKLPPEFSPSSRDIPFVRRLRKSLYGLKQSGRNWNNTLDDFLVGVGLDRSTTDLCLYSSRDDRGETNLLVAVYVDDLVMAGRRE-KVGEFKHNISQRFRMKDLDSLSRVFGIEVRRDGPNGTITISRGSYIREVVKRYGFDECRGVPTPVEEKVKISAPDRGR-SGNSTEYRGMVGSLMYALTGTRPDVAYAVHQAARRMEDPCREDLGTCKRIL 942
            P++  E+L+G  A+ W+ +M+ ++ AL++N T    D   LPAG K I +KW+F+ K  K+G + R+K+RLVA+   +    +++ET +PV R  T                              EE++++ P  F  S+     V +L+K++YGLKQSGR WNNTLD+ L  +G  RS  + CLY  +  +G +   +AVYVDDL++    E ++   K  IS +F M D  SLS   G+E++RDG  G +++ + +YIR ++K YG   CR V TP++    +   D      N T+Y+ ++GSLMY    +RPD+ +AV + ++R  +P  E     K IL
Sbjct:  818 PQTVTEALQGEYAQNWQESMRSEYNALLSNDTWSLVD---LPAGAKTIGSKWVFRIKRDKNGEIERFKSRLVAKGCGQQFGVNYWETFSPVIRYETIRMLFAIAAEKQLFMHQIDISNAYLNSSLDEEVYMRQPQNFI-STEHPNKVLKLKKAIYGLKQSGRAWNNTLDEVLQNMGFKRSKNEACLYVKQQQQGSS--YIAVYVDDLIIISPSENEICAIKRQISSKFEMHDSGSLSYFLGLEIQRDGKQGYVSLCQKTYIRNLLKTYGMQNCRAVATPLDPGFLVCCKDDSCVKVNVTQYQSLIGSLMYLAILSRPDILHAVSKLSQRNTNPHTEHENAAKHIL 1156          
BLAST of mRNA_H-paniculata_contig37178.9805.1 vs. uniprot
Match: A0A5D6YB57_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB57_9STRA)

HSP 1 Score: 187 bits (475), Expect = 7.020e-52
Identity = 117/343 (34.11%), Postives = 185/343 (53.94%), Query Frame = 1
Query:   22 LKGPEAEKWRMAMKEQWGALVNNGTCESEDLGRLPAGRKAIRTKWIFKRKLKKDGSVARYKARLVAQDFSEVESEDFFETSAPVARMST-----------------------------KEELFVKLPPEFSPSSRDIPFVRRLRKSLYGLKQSGRNWNNTLDDFLVGVGLDRSTTDLCLYSSRDDRGETNLLVAVYVDDLVMA-GRREKVGEFKHNISQRFRMKDLDSLSRVFGIEVRRDGPNGTITISRGSYIREVVKRYGFDECRGVPTPVEEKVKISAP--DRGRSGNST----EYRGMVGSLMYALTGTRPDVAYAVHQAARRMEDPCREDLGTCKRIL 942
            ++  +A KW+ A + ++ +L  N T E   L  LP GRKAI +KW+FK K   +G + RYKARLVA+ F +    DF ET APVA+ ++                             +EE+++K P  F   ++    V +L+++LYGLKQS R WN T+D+F+  +G  +  TD C+Y  RDD+    + V +YVDDL++A    + +   K  +S+RF M DL  L    G+EV RD  +G +++ +  ++  V+ ++G  +C+ V TP +  +K++    + G   + T     YR  VG++MY + GTRPD+A AV   ++   DPC       KR+L
Sbjct:    1 MESSDASKWKEACESEFESLCKNKTWE---LVPLPRGRKAISSKWVFKVKETVEGLIERYKARLVAKGFLQKYGVDFEETFAPVAKFASIRIILSIAAQYKLVLHQMDVKTAFLNGLLEEEIYMKQPNGFV-DAKYPDHVCKLKRALYGLKQSPRMWNQTIDEFMRKIGFTKCETDHCVYVKRDDKAM--IFVVLYVDDLILACNDTDLLAATKRALSERFEMSDLGELKYCLGMEVERDDKSGDVSMRQTKFLHSVLAKFGMQDCKPVKTPQDPGLKLTKAMCEGGCKHDDTMQGVPYRSAVGAVMYLMVGTRPDLAAAVGVLSQFAADPCPTHWQALKRVL 337          
BLAST of mRNA_H-paniculata_contig37178.9805.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY)

HSP 1 Score: 195 bits (495), Expect = 1.100e-51
Identity = 124/347 (35.73%), Postives = 174/347 (50.14%), Query Frame = 1
Query:    1 PKSAAESLKGPEAEKWRMAMKEQWGALVNNGTCESEDLGRLPAGRKAIRTKWIFKRKLKKDGSVARYKARLVAQDFSEVESEDFFETSAPVARMST-----------------------------KEELFVKLPPEFSPSSRDIPFVRRLRKSLYGLKQSGRNWNNTLDDFLVGVGLDRSTTDLCLYSSRDDRGETNLLVAVYVDDLVMAGRREKV-GEFKHNISQRFRMKDLDSLSRVFGIEVRRDGPNGTITISRGSYIREVVKRYGFDECRGVPTPVEEKVKISAPDRGRSGNST---EYRGMVGSLMYALTGTRPDVAYAVHQAARRMEDPCREDLGTCKRIL 942
            P+S AE+   PE  +W  A+K ++  L   GT E +D   LP  R A+  KW+F+RK  K+G V +YKARLVAQ +S++   DF ET APV R+ +                             +EE++++ P  F   S  I    RLRK+LYGLKQSGR WN  L   L  +G  R   D C+Y      GE  + + V+VDDL++     K+  E K ++   F + DL    ++ GIE+ RD   G I IS+  YI  ++KRY  +    V  P++  V  +A D     +      Y  MVGSLMYA  GTRPD++YAV   ++    P        KR+L
Sbjct:  907 PRSLAEAQASPEWPEWEKAVKAEYDQLQGMGTWELQD---LPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRIC---RLRKTLYGLKQSGREWNRKLHRELTELGYKRLEADPCVYLWERKEGEVQI-ITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGEPQKIVGIEIERDREAGKIQISQQHYIESILKRYQLENANAVGMPLDPNVAFTAEDENEEADDRLAGGYASMVGSLMYAAVGTRPDISYAVQTLSKYTACPRPVHWTAAKRVL 1246          
BLAST of mRNA_H-paniculata_contig37178.9805.1 vs. uniprot
Match: A0A438C6D2_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438C6D2_VITVI)

HSP 1 Score: 194 bits (493), Expect = 1.450e-51
Identity = 119/339 (35.10%), Postives = 190/339 (56.05%), Query Frame = 1
Query:    1 PKSAAESLKGPEAEKWRMAMKEQWGALVNNGTCESEDLGRLPAGRKAIRTKWIFKRKLKKDGSVARYKARLVAQDFSEVESEDFFETSAPVARMST--KEELFVKLPPEFSPSSRDIPFVRRLRKSLYGLKQSGRNWNNTLDDFLVGVGLDRSTTDLCLYSSRDDRGETNLLVAVYVDDLVMAGRR-EKVGEFKHNISQRFRMKDLDSLSRVFGIEVRRDGPNGTITISRGSYIREVVKRYGFDECRGVPTPVEEKVKISAPDRGRSGNSTE------YRGMVGSLMYALTGTRPDVAYAVHQAARRMEDPCREDLGTCKRIL------VISVLCLTSA 972
            P+   E+L+   + KW +AMK++  +L+ N T E   L  LP G+KA+  KW+++ K + DGS  RYKARLV + F + E  D+ E  +PV +MST   E+L++  P  F    ++   V +LRKSLYGLKQ+ R W    D+F+  +G  R   D C Y    D   + +++ +YVDD+++ G   EK+   K  +S++F MKDL +  ++ G+ + RD  NGT+ +S+  Y+++V+ R+  +E + V TP+    K+S     ++    +      Y   +GSLMYA+  TRPD+A+AV   +R M  P ++     K IL      + + LC T A
Sbjct:  607 PECYDEALQDENSSKWELAMKDEMDSLLGNQTWE---LTELPVGKKALHNKWVYRIKNEHDGS-KRYKARLVVKGFQQKEGIDYTEIFSPVVKMSTIRLEDLYMIQPEGFIVQGQEN-LVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYVKSFDN--SYIILLLYVDDMLIVGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTCLCFTGA 938          
BLAST of mRNA_H-paniculata_contig37178.9805.1 vs. uniprot
Match: A0A182GIT5_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GIT5_AEDAL)

HSP 1 Score: 187 bits (476), Expect = 2.550e-51
Identity = 116/337 (34.42%), Postives = 181/337 (53.71%), Query Frame = 1
Query:   22 LKGPEAEKWRMAMKEQWGALVNNGTCESEDLGRLPAGRKAIRTKWIFKRKLKKDGSVARYKARLVAQDFSEVESEDFFETSAPVARMST-----------------------------KEELFVKLPPEFSPSSRDIPFVRRLRKSLYGLKQSGRNWNNTLDDFLVGVGLDRSTTDLCLYSSRDDRGETNLLVAVYVDDLVMA-GRREKVGEFKHNISQRFRMKDLDSLSRVFGIEVRRDGPNGTITISRGSYIREVVKRYGFDECRGVPTPVEEKVKISAPDRGRSGNSTEYRGMVGSLMYALTGTRPDVAYAVHQAARRMEDPCREDLGTCKRIL 942
            +KGPEAE W+ AM ++  +L  NGT +  D   LP GRKA+  KWIFKRKL +DG+V RYKARLVAQ F++    D+ E  APV R  T                             +E +F++ PP +   +RD   V  L+KSLYGLKQ+G  WN   D  L  +   +S  D CLY  R+ +G T L++  YVDD+V+A    E+  E    +++ F++  L  +S   GI++ R+      ++S+ +YI+++++++G ++ +    P++        ++    N+ +Y  ++GSL+Y    TRPD+A +V    R +  P + D    KRIL
Sbjct:    1 MKGPEAELWKAAMDDEMTSLRENGTWQLTD---LPPGRKAVGCKWIFKRKLDEDGNVVRYKARLVAQGFTQKFGTDYDEVFAPVVRQVTFRVLLTVASQRGMVVKHADVKTAYLNGELEESIFMRQPPGYEDENRDA--VCSLQKSLYGLKQAGYVWNKKFDQVLKRMKFQQSKNDPCLYVRRNGKGYTYLVI--YVDDMVIACNDDEEYEEIIKTLNRHFKVTSLGDISHFLGIKINRNEKG--FSLSQQTYIKQILEQFGMNQAKPSKYPLDPGHIQQKEEQVMLPNNHQYASLIGSLLYVAVNTRPDIAVSVSILGRSVSAPTQADWNEAKRIL 328          
BLAST of mRNA_H-paniculata_contig37178.9805.1 vs. uniprot
Match: A0A0A1X768_ZEUCU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Zeugodacus cucurbitae TaxID=28588 RepID=A0A0A1X768_ZEUCU)

HSP 1 Score: 193 bits (491), Expect = 3.640e-51
Identity = 118/345 (34.20%), Postives = 188/345 (54.49%), Query Frame = 1
Query:    1 PKSAAESLKGPEAEKWRMAMKEQWGALVNNGTCESEDLGRLPAGRKAIRTKWIFKRKLKKDGSVARYKARLVAQDFSEVESEDFFETSAPVARMST-----------------------------KEELFVKLPPEFSPSSRDIPFVRRLRKSLYGLKQSGRNWNNTLDDFLVGVGLDRSTTDLCLYSSRDDRGETNLLVAVYVDDLVMA-GRREKVGEFKHNISQRFRMKDLDSLSRVFGIEVRRDGPNGTITISRGSYIREVVKRYGFDECRGVPTPVEEKVKISAPDRGRSG-NSTEYRGMVGSLMYALTGTRPDVAYAVHQAARRMEDPCREDLGTCKRIL 942
            P +  E+L    + +W  +MK ++ ALV N T  + D   LP G+K I +KW+F+ K   DG++ ++K+RLVA+  S+    +++ET +PV R  T                              EE++++ P  F   S++   V +L K++YGLKQSGR WN+TLD  L   G +   ++ CLY    +R +    +AVYVDDL++A    E+V   K  +S +F+++D ++L    G EV R+G  G I++ + +YI+E++  YG   CR V TP++   +IS  D+  S  + T Y+ ++GSLMY    TRPD+ +AV   A+R +DP  E     K +L
Sbjct:  789 PHTVKEALASEYSFEWEKSMKNEYAALVANNTWSAVD---LPRGQKVIGSKWVFRIKRNPDGNIEKFKSRLVAKGCSQQLGLNYWETFSPVIRYETIRMLLAIAVEKELHLHQIDISNAYLNSDLTEEVYIRQPEGFI-DSKNPDKVLKLNKAIYGLKQSGREWNSTLDIALKNFGFNPCKSEPCLYVK--ERDKVYSYIAVYVDDLILACPSEEEVTNIKRKLSSKFKLQDGNTLKFFLGFEVEREGKTGAISVCQKTYIKELLSVYGITSCRPVSTPLDPGFQISCKDKNCSKVDVTNYQSLIGSLMYLAISTRPDIMHAVSLLAQRNQDPHSEHEAGAKHVL 1127          
BLAST of mRNA_H-paniculata_contig37178.9805.1 vs. uniprot
Match: J9KJ72_ACYPI (Integrase catalytic domain-containing protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9KJ72_ACYPI)

HSP 1 Score: 193 bits (490), Expect = 4.920e-51
Identity = 112/344 (32.56%), Postives = 190/344 (55.23%), Query Frame = 1
Query:    1 PKSAAESLKGPEAEKWRMAMKEQWGALVNNGTCESEDLGRLPAGRKAIRTKWIFKRKLKKDGSVARYKARLVAQDFSEVESEDFFETSAPVARMST-----------------------------KEELFVKLPPEFSPSSRDIPFVRRLRKSLYGLKQSGRNWNNTLDDFLVGVGLDRSTTDLCLYSSRDDRGETNLLVAVYVDDLVMAGRRE-KVGEFKHNISQRFRMKDLDSLSRVFGIEVRRDGPNGTITISRGSYIREVVKRYGFDECRGVPTPVEEKVKISAPDRGRSGNSTEYRGMVGSLMYALTGTRPDVAYAVHQAARRMEDPCREDLGTCKRIL 942
            PK+ + ++ G  A  W+ A++++  +L  N T     L  LP GRK + TKW+FK K    GSV +YKARLVAQ FS+ E  D+++T +PVA+++T                              E+++++ P   + +S D+ F  +L KSLYGLKQ+ + W+   D+++  +GL++S +D CLY   ++     + + +YVDD+++AG    K+GE K  + + F M+D   L+   G+++  D   G + I++  Y+ +V+K++  D C  + TP+E K+ I   ++     +  YR +VGSLMYA+ G+RPD++YA++   R    P        KR+L
Sbjct:  771 PKTYSSAVTGVHANLWKNAIQDEIDSLKKNNTWT---LSHLPKGRKVVGTKWVFKIKRDSIGSVKKYKARLVAQGFSQKEGVDYYDTYSPVAKLTTLRTLLAIAVQRNWFLQQLDVKTAFLYGILTEDIYIEQPEGLNYNS-DMIF--KLNKSLYGLKQASKCWHERFDNYIAKLGLEQSDSDQCLYILNNNNTHDIIYLLLYVDDIIIAGSNMLKIGEIKSYLKEEFEMEDNGDLNYFLGLKINYDKTVGKLYINQTQYLEDVLKKFNMDNCNTISTPIESKLNIEEDNKQEC--NQPYRQLVGSLMYAMLGSRPDLSYALNFFCRYQSKPNECHWNHLKRVL 1106          
BLAST of mRNA_H-paniculata_contig37178.9805.1 vs. uniprot
Match: A0A0C9RAA9_9HYME (POLX_4 protein (Fragment) n=1 Tax=Fopius arisanus TaxID=64838 RepID=A0A0C9RAA9_9HYME)

HSP 1 Score: 191 bits (484), Expect = 5.360e-51
Identity = 118/350 (33.71%), Postives = 191/350 (54.57%), Query Frame = 1
Query:    1 PKSAAESLKGPEAEKWRMAMKEQWGALVNNGTCESEDLGRLPAGRKAIRTKWIFKRKLKKDGSVARYKARLVAQDFSEVESEDFFETSAPVARMST-----------------------------KEELFVKLPPEFSPSSRDIPFVRRLRKSLYGLKQSGRNWNNTLDDFLVGVGLDRSTTDLCLYSSRDDRGETNLLVAVYVDD-LVMAGRREKVGEFKHNISQRFRMKDLDSLSRVFGIEVRRDGPNGTITISRGSYIREVVKRYGFDECRGVPTPVEEKVKIS------APDRGRSGNSTEYRGMVGSLMYALTGTRPDVAYAVHQAARRMEDPCREDLGTCKRIL 942
            P +  E+L  PEA+ W+ AMKE+   + ++ T  +  L +LP G++AI TKW+FK K   +G++ RYKARLV +  S+ +  D+ ET +PV R ++                             +EE+F+K P  +S +S     V RL KSLYGLKQ+ + WN+ L++ L+ +GL RS  D C+Y    +   + + VA+YVDD LV +  ++     K+ +S + +MKD+ S S V G+ V+RD     I + +  YI  V+KR+G D+C  V TP++   K++      + +  +      Y   VGSL+YA   TRPD+++AV+  +R  ++P +      KR++
Sbjct:  233 PVNLEEALNSPEADDWKRAMKEE---IESHKTNRTWVLTKLPEGKRAINTKWVFKTKRNAEGALVRYKARLVVKGCSQKQGVDYSETFSPVVRYNSLRFLFAMAAKHDLSVHQLDAVTAFLNGELQEEVFMKQPEGYSDNSGR---VCRLLKSLYGLKQASKVWNDKLNEVLISLGLIRSEVDQCIYFCVSEY--SMVYVAIYVDDVLVFSNDKKATQRIKNELSSKIKMKDMGSASSVLGMRVQRDEVKKLIKLDQSEYISSVLKRFGMDDCNAVATPLDLSQKLTLDMCPKSEEEKKEMEKVPYMEAVGSLLYAAQNTRPDISFAVNLLSRFSQNPGKGHWLALKRVM 574          
BLAST of mRNA_H-paniculata_contig37178.9805.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS)

HSP 1 Score: 192 bits (488), Expect = 9.310e-51
Identity = 121/349 (34.67%), Postives = 181/349 (51.86%), Query Frame = 1
Query:    1 PKSAAESLKGPEAEKWRMAMKEQWGALVNNGTCESEDLGRLPAGRKAIRTKWIFKRKLKKDGSVARYKARLVAQDFSEVESEDFFETSAPVARMST-----------------------------KEELFVKLPPEFSPSSRDIPFVRRLRKSLYGLKQSGRNWNNTLDDFLVGVGLDRSTTDLCLYSSRDDRGETNLLVAVYVDDLVMAGRR-EKVGEFKHNISQRFRMKDLDSLSRVFGIEVRRDGPNGTITISRGSYIREVVKRYGFDECRGVPTPVEEKVKIS------APDRGRSGNSTEYRGMVGSLMYALTGTRPDVAYAVHQAARRMEDPCREDLGTCKRI 939
            P+S AE+   PE  +W+ AM E+   +   GT   ED   LPAGR  I  KW+F +K  +DG+++RYKARLVAQ +S++   D+ ET APV R+ +                             +EE++++ P  +   S     V RLRK+LYGLKQSGR WN   D  L  +G  +   D C+Y    +   T  ++ V+VDDL++     E + E K  +   F +KDL    ++ GIE++RD  NGTI++S+  YI  V+ R+G    R V TP++  V +         D    G    Y+ ++GSL+YA  GTRPD+++AV +  +   +P  E     KR+
Sbjct:  879 PRSVAEAEASPEWAEWKKAMDEEMSVIKEMGTYTKED---LPAGRDTIGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYTETFAPVVRLESVRAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGR---VCRLRKTLYGLKQSGREWNREFDRKLTSIGFSKLEADHCVYKRIREGRMT--IITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRFGMQNARPVSTPLDPNVILKKRTDDLVADPAMVGG---YQSVIGSLLYAARGTRPDISHAVQELGQFASNPGPEHWTALKRV 1216          
BLAST of mRNA_H-paniculata_contig37178.9805.1 vs. uniprot
Match: A0A034WM55_BACDO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Bactrocera dorsalis TaxID=27457 RepID=A0A034WM55_BACDO)

HSP 1 Score: 191 bits (485), Expect = 9.440e-51
Identity = 123/350 (35.14%), Postives = 185/350 (52.86%), Query Frame = 1
Query:    1 PKSAAESLKGPEAEKWRMAMKEQWGALVNNGTCESEDLGRLPAGRKAIRTKWIFKRKLKKDGSVARYKARLVAQDFSEVESEDFFETSAPVARMST-----------------------------KEELFVKLPPEFSPSSRDIPFVRRLRKSLYGLKQSGRNWNNTLDDFLVGVGLDRSTTDLCLYSSRDDRGETNLLVAVYVDDLVMAGRREKV-GEFKHNISQRFRMKDLDSLSRVFGIEVRRDGPNGTITISRGSYIREVVKRYGFDECRGVPTPVEEKVKISAP------DRGRSGNSTEYRGMVGSLMYALTGTRPDVAYAVHQAARRMEDPCREDLGTCKRIL 942
            P +  E++     + W+ AM E+  +   NGT E   L  LP G+KAI +KW+FKRK+  DG   RYKARLV + F++ +  D+ ET APV R ++                             KEE+++  P  F   S     V +LRKSLYGLKQS R WN  L+  LV  GL RS  D C+Y    D+    L VAVYVDD+++     K+  + K  +S+ F+MKDL + S V G+ + ++   GT+ I + +YI +V++R+G +EC  V TP++   K+SA       D  R   +  Y+  +G L++A   TRPD+ +AV+  +R   +P +      KR++
Sbjct:  342 PNTVEEAMASEHHKLWQSAMIEEIESHDINGTWE---LSALPMGKKAIPSKWVFKRKVNADGDPVRYKARLVVKGFNQKQHIDYDETFAPVVRYTSIRFLLALAVKYNLTVYQMDAVSAFLHGELKEEIYMTQPSGFDDGSGR---VCKLRKSLYGLKQSSRVWNIKLNSTLVSFGLQRSNVDQCVYFLVADK--KMLFVAVYVDDVILFANDTKLLNKLKDKLSETFKMKDLGAASSVLGMRIAQNLKEGTLKIDQSAYIADVIRRFGMEECNPVGTPLDVNQKLSAEMCPTNDDEKREMAAVPYKQAIGCLLFAAQVTRPDICFAVNLLSRYSTNPGKAHWTAVKRVM 683          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig37178.9805.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W8BWJ0_CERCA1.730e-5434.78Retrovirus-related Pol polyprotein from transposon... [more]
A0A5D6YB57_9STRA7.020e-5234.11Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A401GYH9_9APHY1.100e-5135.73Uncharacterized protein n=6 Tax=Sparassis crispa T... [more]
A0A438C6D2_VITVI1.450e-5135.10Retrovirus-related Pol polyprotein from transposon... [more]
A0A182GIT5_AEDAL2.550e-5134.42Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0A1X768_ZEUCU3.640e-5134.20Retrovirus-related Pol polyprotein from transposon... [more]
J9KJ72_ACYPI4.920e-5132.56Integrase catalytic domain-containing protein n=1 ... [more]
A0A0C9RAA9_9HYME5.360e-5133.71POLX_4 protein (Fragment) n=1 Tax=Fopius arisanus ... [more]
A0A284QR88_ARMOS9.310e-5134.67Uncharacterized protein n=2 Tax=Armillaria TaxID=4... [more]
A0A034WM55_BACDO9.440e-5135.14Retrovirus-related Pol polyprotein from transposon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig37178contigH-paniculata_contig37178:160..1408 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score200.3
Seed ortholog evalue1.5e-48
Seed eggNOG ortholog15368.BRADI4G26120.1
KEGG koko:K20093
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs37THH@33090,3GG2K@35493,3INI6@38820,3M96M@4447,COG2801@1,KOG0017@2759
EC3.6.4.12
COG Functional cat.L
Best tax levelPoales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036
Exons3
Model size1083
Cds size1083
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig37178.9805.1prot_H-paniculata_contig37178.9805.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig37178 160..1408 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930146.7878635-CDS-H-paniculata_contig37178:159..4461622930146.7878635-CDS-H-paniculata_contig37178:159..446Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig37178 160..446 +
1691481166.0148952-CDS-H-paniculata_contig37178:159..4461691481166.0148952-CDS-H-paniculata_contig37178:159..446Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig37178 160..446 +
1622930146.8056128-CDS-H-paniculata_contig37178:534..10261622930146.8056128-CDS-H-paniculata_contig37178:534..1026Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig37178 535..1026 +
1691481166.025319-CDS-H-paniculata_contig37178:534..10261691481166.025319-CDS-H-paniculata_contig37178:534..1026Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig37178 535..1026 +
1622930146.8161342-CDS-H-paniculata_contig37178:1104..14081622930146.8161342-CDS-H-paniculata_contig37178:1104..1408Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig37178 1105..1408 +
1691481166.033069-CDS-H-paniculata_contig37178:1104..14081691481166.033069-CDS-H-paniculata_contig37178:1104..1408Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig37178 1105..1408 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig37178.9805.1

>prot_H-paniculata_contig37178.9805.1 ID=prot_H-paniculata_contig37178.9805.1|Name=mRNA_H-paniculata_contig37178.9805.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=361bp
PKSAAESLKGPEAEKWRMAMKEQWGALVNNGTCESEDLGRLPAGRKAIRT
KWIFKRKLKKDGSVARYKARLVAQDFSEVESEDFFETSAPVARMSTKEEL
FVKLPPEFSPSSRDIPFVRRLRKSLYGLKQSGRNWNNTLDDFLVGVGLDR
STTDLCLYSSRDDRGETNLLVAVYVDDLVMAGRREKVGEFKHNISQRFRM
KDLDSLSRVFGIEVRRDGPNGTITISRGSYIREVVKRYGFDECRGVPTPV
EEKVKISAPDRGRSGNSTEYRGMVGSLMYALTGTRPDVAYAVHQAARRME
DPCREDLGTCKRILVISVLCLTSALRSAVRVVVTVWKDSLMPIGRKMSRT
ECPQQNTFSS*
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mRNA from alignment at H-paniculata_contig37178:160..1408+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig37178.9805.1 ID=mRNA_H-paniculata_contig37178.9805.1|Name=mRNA_H-paniculata_contig37178.9805.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1249bp|location=Sequence derived from alignment at H-paniculata_contig37178:160..1408+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCGAAATCCGCAGCAGAATCATTGAAGGGTCCAGAGGCCGAAAAATGGCG CATGGCAATGAAGGAACAATGGGGGGCGTTGGTGAACAATGGGACATGCG AAAGCGAAGACCTGGGGAGGCTACCCGCAGGACGGAAGGCGATTCGTACG AAATGGATTTTCAAGCGGAAACTGAAGAAGGACGGCAGCGTGGCACGCTA CAAAGCGCGACTGGTAGCTCAAGATTTTTCAGAGGTGGAGAGTGAAGATT TCTTTGAAACCAGCGCCCCCGTAGCTCGCATGTCGACGTTACGCACTATT TTAACTTGGCCGCCGAACATGATTTCGAATTAGAAGGCATGGACGTAGAT GTGGCGTACTTGAACGTCCCCGTAGAAAAGAAGAGCTCTTTGTTAAGCTA CCCCCCGAGTTTTCCCCTTCCTCCCGAGACATACCATTTGTGCGCCGCCT GCGTAAAAGCCTGTACGGGCTCAAGCAGAGCGGCCGAAACTGGAATAACA CTCTTGACGATTTTCTTGTTGGGGTAGGACTCGACCGTTCCACTACCGAC CTATGCTTGTACTCTTCCCGCGACGATAGGGGAGAGACAAACCTTCTGGT GGCCGTGTATGTTGACGACCTGGTCATGGCTGGTCGTCGTGAGAAAGTGG GGGAGTTCAAGCATAACATAAGTCAGCGTTTTAGGATGAAAGACTTGGAC TCTCTCTCGCGCGTGTTCGGAATAGAAGTACGACGTGACGGCCCTAATGG TACCATAACCATATCGCGGGGTAGCTACATCCGCGAGGTAGTAAAAAGAT ACGGTTTTGACGAGTGTCGAGGAGTACCCACTCCGGTAGAGGAAAAAGTA AAGATTTCGGCACCCGAGTCGGCCGACAAGCCCTCCGAACCGAGGTCACT TGGAGCTGTACTGTCGGACATAGGCGCAGGAGGACAAGAAAGCAGCAGAG GGAGAAGTGGCAATTCAACTGAATACAGAGGCATGGTAGGATCACTCATG TACGCCTTGACAGGAACTCGACCTGATGTAGCATACGCGGTACACCAAGC AGCACGTCGTATGGAGGACCCGTGTCGGGAAGACCTCGGTACATGCAAGC GCATTTTGGTTATCTCAGTACTGTGCCTGACCTCGGCATTACGTTCGGCG GTGAGAGTAGTGGTCACGGTCTGGAAGGATTCGTTGATGCCGATTGGGCG GAAGATGTCGAGGACCGAATGTCCCCAACAGAATACGTTTTCAAGCTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig37178:160..1408+

>mRNA_H-paniculata_contig37178.9805.1 ID=mRNA_H-paniculata_contig37178.9805.1|Name=mRNA_H-paniculata_contig37178.9805.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2166bp|location=Sequence derived from alignment at H-paniculata_contig37178:160..1408+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCGAAATCCGCAGCAGAATCATTGAAGGGTCCAGAGGCCGAAAAATGGCG
CATGGCAATGAAGGAACAATGGGGGGCGTTGGTGAACAATGGGACATGCG
AAAGCGAAGACCTGGGGAGGCTACCCGCAGGACGGAAGGCGATTCGTACG
AAATGGATTTTCAAGCGGAAACTGAAGAAGGACGGCAGCGTGGCACGCTA
CAAAGCGCGACTGGTAGCTCAAGATTTTTCAGAGGTGGAGAGTGAAGATT
TCTTTGAAACCAGCGCCCCCGTAGCTCGCATGTCGACCCGAAATCCGCAG
CAGAATCATTGAAGGGTCCAGAGGCCGAAAAATGGCGCATGGCAATGAAG
GAACAATGGGGGGCGTTGGTGAACAATGGGACATGCGAAAGCGAAGACCT
GGGGAGGCTACCCGCAGGACGGAAGGCGATTCGTACGAAATGGATTTTCA
AGCGGAAACTGAAGAAGGACGGCAGCGTGGCACGCTACAAAGCGCGACTG
GTAGCTCAAGATTTTTCAGAGGTGGAGAGTGAAGATTTCTTTGAAACCAG
CGCCCCCGTAGCTCGCATGTCGACAAAAGAAGAGCTCTTTGTTAAGCTAC
CCCCCGAGTTTTCCCCTTCCTCCCGAGACATACCATTTGTGCGCCGCCTG
CGTAAAAGCCTGTACGGGCTCAAGCAGAGCGGCCGAAACTGGAATAACAC
TCTTGACGATTTTCTTGTTGGGGTAGGACTCGACCGTTCCACTACCGACC
TATGCTTGTACTCTTCCCGCGACGATAGGGGAGAGACAAACCTTCTGGTG
GCCGTGTATGTTGACGACCTGGTCATGGCTGGTCGTCGTGAGAAAGTGGG
GGAGTTCAAGCATAACATAAGTCAGCGTTTTAGGATGAAAGACTTGGACT
CTCTCTCGCGCGTGTTCGGAATAGAAGTACGACGTGACGGCCCTAATGGT
ACCATAACCATATCGCGGGGTAGCTACATCCGCGAGGTAGTAAAAAGATA
CGGTTTTGACGAGTGTCGAGGAGTACCCACTCCGGTAGAGGAAAAAGTAA
AGATTTCGGCACCCGAAAAAGAAGAGCTCTTTGTTAAGCTACCCCCCGAG
TTTTCCCCTTCCTCCCGAGACATACCATTTGTGCGCCGCCTGCGTAAAAG
CCTGTACGGGCTCAAGCAGAGCGGCCGAAACTGGAATAACACTCTTGACG
ATTTTCTTGTTGGGGTAGGACTCGACCGTTCCACTACCGACCTATGCTTG
TACTCTTCCCGCGACGATAGGGGAGAGACAAACCTTCTGGTGGCCGTGTA
TGTTGACGACCTGGTCATGGCTGGTCGTCGTGAGAAAGTGGGGGAGTTCA
AGCATAACATAAGTCAGCGTTTTAGGATGAAAGACTTGGACTCTCTCTCG
CGCGTGTTCGGAATAGAAGTACGACGTGACGGCCCTAATGGTACCATAAC
CATATCGCGGGGTAGCTACATCCGCGAGGTAGTAAAAAGATACGGTTTTG
ACGAGTGTCGAGGAGTACCCACTCCGGTAGAGGAAAAAGTAAAGATTTCG
GCACCCGACAGAGGGAGAAGTGGCAATTCAACTGAATACAGAGGCATGGT
AGGATCACTCATGTACGCCTTGACAGGAACTCGACCTGATGTAGCATACG
CGGTACACCAAGCAGCACGTCGTATGGAGGACCCGTGTCGGGAAGACCTC
GGTACATGCAAGCGCATTTTGGTTATCTCAGTACTGTGCCTGACCTCGGC
ATTACGTTCGGCGGTGAGAGTAGTGGTCACGGTCTGGAAGGATTCGTTGA
TGCCGATTGGGCGGAAGATGTCGAGGACCGAATGTCCCCAACAGAATACG
TTTTCAAGCTGACAGAGGGAGAAGTGGCAATTCAACTGAATACAGAGGCA
TGGTAGGATCACTCATGTACGCCTTGACAGGAACTCGACCTGATGTAGCA
TACGCGGTACACCAAGCAGCACGTCGTATGGAGGACCCGTGTCGGGAAGA
CCTCGGTACATGCAAGCGCATTTTGGTTATCTCAGTACTGTGCCTGACCT
CGGCATTACGTTCGGCGGTGAGAGTAGTGGTCACGGTCTGGAAGGATTCG
TTGATGCCGATTGGGCGGAAGATGTCGAGGACCGAATGTCCCCAACAGAA
TACGTTTTCAAGCTGA
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