mRNA_H-paniculata_contig3717.9803.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3717.9803.1 vs. uniprot
Match: A0A8K0F0F9_BRALA (Hypp5001 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8K0F0F9_BRALA) HSP 1 Score: 75.1 bits (183), Expect = 5.060e-13 Identity = 38/128 (29.69%), Postives = 68/128 (53.12%), Query Frame = 1
Query: 13 LRLDTKIRTFKASALDVVLYGCFTWMLLDSRYAELRDYHRELLLRCLSIYNKRGPTNHGLSYRVALERTGYESIEMTMKKRRFRFVGNVLRVGDESLPKVMISEELDGGTRGRGRPARQWPYCVVNDV 396
+ L TKI+ ++A+ ++ YG W+ ++ L +H+ L R L + TN + LE+TG S+E + R R++G+++R+ E LP+ ++ + G R RGRP R W V++D+
Sbjct: 473 IHLSTKIKIYEAAIFTILTYGSEVWVTTKAQSHRLEAFHQRCLRRILRVRWFHRVTNQSV-----LEQTGTTSVEAVVAANRIRWLGHMIRMPKERLPRFLLDWNPNHGKRSRGRPRRTWLDSVLDDI 595
BLAST of mRNA_H-paniculata_contig3717.9803.1 vs. uniprot
Match: UPI000C052046 (uncharacterized protein LOC111340234 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C052046) HSP 1 Score: 73.9 bits (180), Expect = 6.660e-13 Identity = 43/128 (33.59%), Postives = 70/128 (54.69%), Query Frame = 1
Query: 25 TKIRTFKASALDVVLYGCFTWMLLDSRYAELRDYHRELLLRCLSIYNKRGPTNHGLSYRVALERTGYESIEMTMKKRRFRFVGNVLRVGDESLPKVMISEELDGGTRGRGRPARQWPYCVVNDVNDFS 408
TKIR FK++ L +LYG +W + ++ +L + L L IY + +N+ L RTG E I+ +++RR+R++G+VLR+ +LP+V + DG R RGRP W V ++ + S
Sbjct: 158 TKIRFFKSNVLSTLLYGAESWKMTETISHKLEVFQNSCLRNILRIYWPQTISNYELR-----RRTGTELIKQQVQRRRWRWIGHVLRMPSAALPRVALRWTPDG-RRKRGRPRETWRRTVEKEMKENS 279
BLAST of mRNA_H-paniculata_contig3717.9803.1 vs. uniprot
Match: A0A6P4YQR2_BRABE (uncharacterized protein LOC109471784 n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4YQR2_BRABE) HSP 1 Score: 70.5 bits (171), Expect = 1.130e-11 Identity = 44/134 (32.84%), Postives = 71/134 (52.99%), Query Frame = 1
Query: 13 LRLDTKIRTFKASALDVVLYGCFTWMLLDSRYAELRDYHRELLLRCLSIYNKRGPTNHGLSYRVALERTGYESIEMTMKKRRFRFVGNVLRVGDESLPKVMISEELDGGTRGRGRPARQWPYCVVNDVNDFSIS 414
+ L TK+R F+++ V+LYGC TW L + +L+ + L L I+ R +N L LE G E +EMT+++R++R++G+ LR ES+ + + + G R RGRP W V D+ + S
Sbjct: 150 ISLKTKLRIFESN---VLLYGCETWGLTQANIKKLQTFINARLRYILGIWWPRKVSNQDL-----LEIAGQERVEMTIRRRKWRWIGHTLRKPPESITRTALDWDPQG-RRKRGRPRLSWKRGVRKDLTAANTS 274
BLAST of mRNA_H-paniculata_contig3717.9803.1 vs. uniprot
Match: UPI00200FE13E (uncharacterized protein LOC125233589 n=1 Tax=Leguminivora glycinivorella TaxID=1035111 RepID=UPI00200FE13E) HSP 1 Score: 69.3 bits (168), Expect = 2.300e-11 Identity = 41/134 (30.60%), Postives = 66/134 (49.25%), Query Frame = 1
Query: 10 KLRLDTKIRTFKASALDVVLYGCFTWMLLDSRYAELRDYHRELLLRCLSIYNKRGPTNHGLSYRVALERTGYESIEMTMKKRRFRFVGNVLRVGDESLPKVMISEELDGGTRGRGRPARQWPYCVVNDVNDFSI 411
KL+L TKI +K+ L ++LY TW + L +H L L + + TN + L+ G SI T+K+RR R++G+VLR+ + LP+ ++ E+ R GRP ++ D+ F I
Sbjct: 57 KLKLSTKILVYKSCVLSILLYASETWTTYSRQERRLNAFHMRCLRTILGVTWRDHITNERV-----LDLAGCYSITATLKQRRLRWLGHVLRMDPDRLPRAVMLSEIAYAKRPIGRPLLRFKDSCKRDMLSFGI 185
BLAST of mRNA_H-paniculata_contig3717.9803.1 vs. uniprot
Match: A0A8B8B7A7_CRAVI (uncharacterized protein LOC111107908 n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8B7A7_CRAVI) HSP 1 Score: 68.9 bits (167), Expect = 3.000e-11 Identity = 43/131 (32.82%), Postives = 63/131 (48.09%), Query Frame = 1
Query: 25 TKIRTFKASALDVVLYGCFTWMLLDSRYAELRDYHRELLLRCLSIYNKRGPTNHGLSYRVALERTGYESIEMTMKKRRFRFVGNVLRVGDESLPKVMISEELDGGTRGRGRPARQWPYCVVNDVNDFSISI 417
TKI + ++ V+LYG W ++ S +L + L R I+ N L L R SI +KKRRFR++G+VLR+ +E LPKV + G R GRP W V+ ++ D S+
Sbjct: 66 TKIHIYNSNVKSVLLYGSECWRIIQSDLQKLEVFQNNCLRRIQGIFWPEKIRNEDL-----LRRCNCHSIAEELKKRRFRWLGHVLRMTNERLPKVAL-RWTPPGKRKPGRPRTTWRRTVLAELQDLGYSL 190
BLAST of mRNA_H-paniculata_contig3717.9803.1 vs. uniprot
Match: A0A5C6NA10_9TELE (Sodium/hydrogen exchanger 9B2 n=1 Tax=Takifugu flavidus TaxID=433684 RepID=A0A5C6NA10_9TELE) HSP 1 Score: 69.3 bits (168), Expect = 3.960e-11 Identity = 38/128 (29.69%), Postives = 65/128 (50.78%), Query Frame = 1
Query: 13 LRLDTKIRTFKASALDVVLYGCFTWMLLDSRYAELRDYHRELLLRCLSIYNKRGPTNHGLSYRVALERTGYESIEMTMKKRRFRFVGNVLRVGDESLPKVMISEELDGGTRGRGRPARQWPYCVVNDV 396
++L+TKI+ +KA L +LYGC TW +L +H L + I + TN + L+R G SIE + K + R+ G+++R+ LP+ + L G R GRP +++ C+ + +
Sbjct: 78 IKLETKIKVYKAVVLTSLLYGCETWTTYRKYIKQLERFHMRSLRSIMHIKWQDRVTNLAV-----LDRAGLVSIETMIMKAQLRWSGHLIRMDSTRLPRQVFYGVLSQGQRNTGRPKKRYKDCIKDSL 200
BLAST of mRNA_H-paniculata_contig3717.9803.1 vs. uniprot
Match: A0A5C6MDZ3_9TELE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Takifugu flavidus TaxID=433684 RepID=A0A5C6MDZ3_9TELE) HSP 1 Score: 69.3 bits (168), Expect = 4.370e-11 Identity = 38/128 (29.69%), Postives = 65/128 (50.78%), Query Frame = 1
Query: 13 LRLDTKIRTFKASALDVVLYGCFTWMLLDSRYAELRDYHRELLLRCLSIYNKRGPTNHGLSYRVALERTGYESIEMTMKKRRFRFVGNVLRVGDESLPKVMISEELDGGTRGRGRPARQWPYCVVNDV 396
++L+TKI+ +KA L +LYGC TW +L +H L + I + TN + L+R G SIE + K + R+ G+++R+ LP+ + L G R GRP +++ C+ + +
Sbjct: 188 IKLETKIKVYKAVVLTSLLYGCETWTTYRKYIKQLERFHMRSLRSIMHIKWQDRVTNLAV-----LDRAGLVSIETMIMKAQLRWSGHLIRMDSTRLPRQVFYGVLSQGQRNTGRPKKRYKDCIKDSL 310
BLAST of mRNA_H-paniculata_contig3717.9803.1 vs. uniprot
Match: A0A5C6MND2_9TELE (Uncharacterized protein n=1 Tax=Takifugu flavidus TaxID=433684 RepID=A0A5C6MND2_9TELE) HSP 1 Score: 69.3 bits (168), Expect = 4.570e-11 Identity = 38/128 (29.69%), Postives = 65/128 (50.78%), Query Frame = 1
Query: 13 LRLDTKIRTFKASALDVVLYGCFTWMLLDSRYAELRDYHRELLLRCLSIYNKRGPTNHGLSYRVALERTGYESIEMTMKKRRFRFVGNVLRVGDESLPKVMISEELDGGTRGRGRPARQWPYCVVNDV 396
++L+TKI+ +KA L +LYGC TW +L +H L + I + TN + L+R G SIE + K + R+ G+++R+ LP+ + L G R GRP +++ C+ + +
Sbjct: 198 IKLETKIKVYKAVVLTSLLYGCETWTTYRKYIKQLERFHMRSLRSIMHIKWQDRVTNLAV-----LDRAGLVSIETMIMKAQLRWSGHLIRMDSTRLPRQVFYGVLSQGQRNTGRPKKRYKDCIKDSL 320
BLAST of mRNA_H-paniculata_contig3717.9803.1 vs. uniprot
Match: A0A5C6MDP9_9TELE (Galectin n=1 Tax=Takifugu flavidus TaxID=433684 RepID=A0A5C6MDP9_9TELE) HSP 1 Score: 69.3 bits (168), Expect = 4.590e-11 Identity = 38/128 (29.69%), Postives = 65/128 (50.78%), Query Frame = 1
Query: 13 LRLDTKIRTFKASALDVVLYGCFTWMLLDSRYAELRDYHRELLLRCLSIYNKRGPTNHGLSYRVALERTGYESIEMTMKKRRFRFVGNVLRVGDESLPKVMISEELDGGTRGRGRPARQWPYCVVNDV 396
++L+TKI+ +KA L +LYGC TW +L +H L + I + TN + L+R G SIE + K + R+ G+++R+ LP+ + L G R GRP +++ C+ + +
Sbjct: 102 IKLETKIKVYKAVVLTSLLYGCETWTTYRKYIKQLERFHMRSLRSIMHIKWQDRVTNLAV-----LDRAGLVSIETMIMKAQLRWSGHLIRMDSTRLPRQVFYGVLSQGQRNTGRPKKRYKDCIKDSL 224
BLAST of mRNA_H-paniculata_contig3717.9803.1 vs. uniprot
Match: A0A5C6NV23_9TELE (Uncharacterized protein n=2 Tax=Takifugu flavidus TaxID=433684 RepID=A0A5C6NV23_9TELE) HSP 1 Score: 69.3 bits (168), Expect = 5.140e-11 Identity = 38/128 (29.69%), Postives = 65/128 (50.78%), Query Frame = 1
Query: 13 LRLDTKIRTFKASALDVVLYGCFTWMLLDSRYAELRDYHRELLLRCLSIYNKRGPTNHGLSYRVALERTGYESIEMTMKKRRFRFVGNVLRVGDESLPKVMISEELDGGTRGRGRPARQWPYCVVNDV 396
++L+TKI+ +KA L +LYGC TW +L +H L + I + TN + L+R G SIE + K + R+ G+++R+ LP+ + L G R GRP +++ C+ + +
Sbjct: 364 IKLETKIKVYKAVVLTSLLYGCETWTTYRKYIKQLERFHMRSLRSIMHIKWQDRVTNLAV-----LDRAGLVSIETMIMKAQLRWSGHLIRMDSTRLPRQVFYGVLSQGQRNTGRPKKRYKDCIKDSL 486 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3717.9803.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3717.9803.1 >prot_H-paniculata_contig3717.9803.1 ID=prot_H-paniculata_contig3717.9803.1|Name=mRNA_H-paniculata_contig3717.9803.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=142bp DCPKLRLDTKIRTFKASALDVVLYGCFTWMLLDSRYAELRDYHRELLLRCback to top mRNA from alignment at H-paniculata_contig3717:3560..3985- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3717.9803.1 ID=mRNA_H-paniculata_contig3717.9803.1|Name=mRNA_H-paniculata_contig3717.9803.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=426bp|location=Sequence derived from alignment at H-paniculata_contig3717:3560..3985- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3717:3560..3985- >mRNA_H-paniculata_contig3717.9803.1 ID=mRNA_H-paniculata_contig3717.9803.1|Name=mRNA_H-paniculata_contig3717.9803.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=852bp|location=Sequence derived from alignment at H-paniculata_contig3717:3560..3985- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |