mRNA_H-paniculata_contig3716.9800.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3716.9800.1 vs. uniprot
Match: A0A6H5L4U3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4U3_9PHAE) HSP 1 Score: 447 bits (1150), Expect = 3.320e-153 Identity = 218/289 (75.43%), Postives = 259/289 (89.62%), Query Frame = 1
Query: 49 RQAIRAIDAALKLLPEAVAESTGIKRHRDNYQARVDKLNLVVTRDNQQRDRRAKQQSRVKFSKLELDPNHTT-EPEPSHPARRSYWVLRLVRSTILHGGYLTPKLFAPKDIWTQVGLKLSGFSSRIAALEMILYMIIDRVRGLPKPADSEARKAAAQVMREFRANAHKLQTDLSRHFPYVVPVDPLSLAKEIGPKSNLGKLNNVMKKFGRNVKDTAVGAVERIGAGIQGRHMDDELVYYKQIVSELCDKCQVFDEWFLHLQDQIARNDTEEMDELLLELHLVASFMREV 912
++AIRAID ALKLLPE VAESTGIKRHRDNYQARVDKL +TRDNQ +DRR +QQSRV+FS+++LD + +T E EP+HPARRSYWVLRLVR+TIL+GGYLTPKL+APK++WTQVG+K+SGF+ RI ALE +LYMIID+++ LPKP D+EARK AA+VMR FR AHKLQTDLSRHFPYVV VDPL LAKE+GPKSNLG+LN+VMK GRN+K++AV AVERIGAGI G+H+DD L YYKQ+VSELC +CQVFD WF+HLQDQ+A+NDTEEMDELL+ELHLV+SFMREV
Sbjct: 157 KKAIRAIDTALKLLPEHVAESTGIKRHRDNYQARVDKLTQGLTRDNQHKDRRVRQQSRVRFSQMDLDAHQSTLEAEPTHPARRSYWVLRLVRTTILYGGYLTPKLYAPKEVWTQVGVKVSGFAPRIDALESVLYMIIDQIKDLPKPVDAEARKEAAEVMRTFRQQAHKLQTDLSRHFPYVVQVDPLGLAKELGPKSNLGRLNSVMKNIGRNMKNSAVVAVERIGAGINGKHVDDGLAYYKQVVSELCSECQVFDSWFVHLQDQMAKNDTEEMDELLVELHLVSSFMREV 445
BLAST of mRNA_H-paniculata_contig3716.9800.1 vs. uniprot
Match: D7G2C1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C1_ECTSI) HSP 1 Score: 412 bits (1060), Expect = 7.190e-142 Identity = 200/267 (74.91%), Postives = 237/267 (88.76%), Query Frame = 1
Query: 49 RQAIRAIDAALKLLPEAVAESTGIKRHRDNYQARVDKLNLVVTRDNQQRDRRAKQQSRVKFSKLELDPNHTT-EPEPSHPARRSYWVLRLVRSTILHGGYLTPKLFAPKDIWTQVGLKLSGFSSRIAALEMILYMIIDRVRGLPKPADSEARKAAAQVMREFRANAHKLQTDLSRHFPYVVPVDPLSLAKEIGPKSNLGKLNNVMKKFGRNVKDTAVGAVERIGAGIQGRHMDDELVYYKQIVSELCDKCQVFDEWFLHLQDQIARN 846
++AIRAID ALKLLPE VAESTGIKRHRDNYQARVDKL +TRDNQ +DRR +QQSRV+FS+++LD N +T E EP+HPARRSYWVLRLVR+TIL+GG+LTPKL+APK++WTQVG+K+SGF+ RIAALE +LYM+ID+V+ LPKP D+EARK AA+VMR FR AHKLQTDLSRHFPYVV VDPL LAKE+GPKSNLG+LN+VMK GRNVK +AV AVERIGAGI G+H+DD L YYKQ+VSELC +CQVFD WF+HLQDQ+A+N
Sbjct: 34 KKAIRAIDTALKLLPEHVAESTGIKRHRDNYQARVDKLTQGLTRDNQHKDRRVRQQSRVRFSQMDLDANQSTLEAEPTHPARRSYWVLRLVRTTILYGGHLTPKLYAPKEVWTQVGVKVSGFAPRIAALESVLYMVIDQVKDLPKPVDAEARKEAAEVMRTFRQQAHKLQTDLSRHFPYVVQVDPLGLAKELGPKSNLGRLNSVMKNIGRNVKHSAVVAVERIGAGINGKHVDDGLAYYKQVVSELCSECQVFDSWFVHLQDQMAKN 300
BLAST of mRNA_H-paniculata_contig3716.9800.1 vs. uniprot
Match: A0A7S3MAP6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MAP6_9STRA) HSP 1 Score: 106 bits (265), Expect = 1.810e-22 Identity = 58/205 (28.29%), Postives = 101/205 (49.27%), Query Frame = 1
Query: 265 EPEPSHPARRSYWVLRLVRSTILHGGYLTPKLFAPKDIWTQVGLKLSGFSSRIAALEMILYMIIDRVRGLPKPADSEARKAAAQVMREFRANAHKLQTDLSRHFPYVVPVDPLSLAKEIGPKSNLGK-------------LNNVMKKFGRNVKDTAVGAVERIGAGIQGRHMDDELVYYKQIVSELCDKCQVFDEWFLHLQDQIA 840
E P +YW+LR +R+T+ HGG+LT +F PK IW Q +K SG +++ AA E+I+ ++ + L D ++ A LQ +LS+ FPY+ + +S + + P + L + FG+NV+ A +R+ + + +EL Y +VS++C+KCQ+FD W+ +++ A
Sbjct: 127 ESIPEDAVAVTYWLLRNIRTTMEHGGFLTKDIFVPKRIWIQNDVKFSGINAKTAAFEIIIKLVANHTEALYLSLDEDSMDLAEAAFGFVYEELTALQNNLSKPFPYIKELSVVSNSTKEDPMDSRSSESQVKTGSARSTTLTGFVSSFGKNVRKYAEVGFQRLVVALPSKLSPEELEEYVALVSKVCEKCQLFDTWYEFVKNSAA 331
BLAST of mRNA_H-paniculata_contig3716.9800.1 vs. uniprot
Match: A0A7S2DSJ6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DSJ6_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 2.600e-19 Identity = 65/230 (28.26%), Postives = 112/230 (48.70%), Query Frame = 1
Query: 265 EPEPSHPARRSYWVLRLVRSTILHGGYLTPKLFAPKDIWTQVGLKLSGFSSRIAALEMILYMIIDRVRGLPKPADSEARKA---AAQVMREFRANAHKLQTDLSRHFPYVVPVDPLSLAKEIGPKSNLGK--LNNVMKKFGRNVKDTAVG----AVERIGAGIQGRHMDDELVYYKQIVSELCDKCQVFDEWFLHL-----QDQIARNDTE-----EMDELLLELHLVAS 897
E PS P R+ +W LR +R +IL GGY+ PK+F PK++W Q K +G S + +A E ++ + + + P D A++ +++ ++ L+R F ++ P A + + + L+ V + +K T V A +R+ A + GR D L +Y ++SE+C K QVFDEW + + D R + + E+ +LLLE+ + S
Sbjct: 127 EDPPSWPPRQPFWQLRQIRRSILFGGYIGPKVFIPKEVWRQHNAKFTGLSVKGSAFESLIVQVHKYISPVTFPVDDHDADGWIQASESLKQMLEQLARMHIQLARSFTFI-PAHDTHQANRTAERGHADRPYLSRVGENAFDMLKSTVVNPTLTAYKRVEAAMPGRITTDGLAHYADLLSEVCLKLQVFDEWLIFVGPEGDSDSSVRTEVDSDVKNEVRKLLLEVSQLIS 355
BLAST of mRNA_H-paniculata_contig3716.9800.1 vs. uniprot
Match: A0A6G0WSS4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WSS4_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 5.730e-13 Identity = 64/241 (26.56%), Postives = 108/241 (44.81%), Query Frame = 1
Query: 151 VDKLNLVVTRDNQQRDRRAK------QQSRVKFSKLELDPNHTTEPEPSHPARRS----YWVLRLVRSTILHGGYLTPKLFAPKDIWTQVGLKLSGFSSRIAALEMILYMIIDRVRGLPKPADSEARKAAAQVMREFRANAHKLQTDLSRHFPYVVPV------DPLSLAKEI----GPKSNLGKLNNVMKKFGRNVKDTAVGAVERIGAGIQGRHMDDELVYYKQIVSELCDKCQVFDEW 813
VD L L T + Q + A+ Q +V FS L+ P P + + V+ L+++TI+ GG LTPK++AP+DIW ++L G ++ L+ ++ LP P SE + + + +L+ +L R FP++VP +P + ++I G + +GKL ++ FGR V+ AV VER + D L Y +++ + Q W
Sbjct: 10 VDNLTLEDTNNEQDIESEAEIKSPRSSQRQVNFSADLLERRQHIHDVPYSPPQAGDLHVFGVMHLIQTTIMTGGRLTPKIYAPRDIWYMDRVRLVGVDHKLRLLDACASHFT-LLQSLPIPDTSENKAIFDSALLSLSSAFTELKAELIRPFPHLVPESQATVHEPTKIERDIVNAVGSNNTVGKLTSLAFGFGRMVRKQAVAVVERANSAQVETISKDALGRYAELIMSFFAQAQFLGVW 249
BLAST of mRNA_H-paniculata_contig3716.9800.1 vs. uniprot
Match: A0A0D2WX96_CAPO3 (Uncharacterized protein n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WX96_CAPO3) HSP 1 Score: 77.8 bits (190), Expect = 2.050e-12 Identity = 52/190 (27.37%), Postives = 88/190 (46.32%), Query Frame = 1
Query: 265 EPEPSHPARRSYWVLRLVRSTILHGGYLTPKLFAPKDIWTQVGLKLSGFSSRIAALEMILYMIIDRVRGLPKPADSEARKAAAQVMREFRANAHKLQTDLSRHFPYVVPVDPLSLAKEIGPKSNLGKLNNVMKKFGRNVKDTAVGAVERIGAGIQGRHMDDELVYYKQIVSELCDKCQVFDEWFLHLQDQ 834
+P P P R YW++R++ T+ GGYLTPKL+ P+ +W Q GLKL+ SS+ + + L ++ + K D + + + E K+Q +LSR P++ P LS+ K V+ K ++ D V +V R I + D+ Y ++ L +K ++W + Q
Sbjct: 155 DPPPPSPFHRPYWLMRVLLRTMTTGGYLTPKLYVPRQVWFQTGLKLTSVSSKFMSCDTALIYLLKMDKENVK--DRGSWNKLDKDLDELCTILAKVQNNLSRKLPFI-PESDLSIEGS--------KQQGVVAKGLGSMMDGVVKSVSRAKHNILKEKIADDTKYIDTVI-RLFEKASFLEDWLTFFEGQ 332
BLAST of mRNA_H-paniculata_contig3716.9800.1 vs. uniprot
Match: A0A1V9YYH5_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YYH5_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 3.450e-10 Identity = 56/194 (28.87%), Postives = 88/194 (45.36%), Query Frame = 1
Query: 274 PSHPARRSYWVLRLVRSTILHGGYLTPKLFAPKDIWTQVGLKLSGFSSRIAALEMILYMIIDRVRGLPKPADSEARKAAAQVMREFRAN-AHKLQTDLSRHFPYVV------PVDPLSLAKEIGPKSNLGKLNNVMKK-------FGRNVKDTAVGAVERIGAGIQGRHMDDELVYYKQIVSELCDKCQVFDEW 813
P+ P R + V+ L++ +I G +LTP+L+AP++IW ++L+G +I LE + + RV P +EA K + N +L+ +L R FP + P DP + +++ G + N + K FGR VK AV VER A + + L Y Q V L + Q W
Sbjct: 56 PTGPLR-VFGVMNLIQGSIATGCFLTPRLYAPREIWLMDRVRLAGVDHKIRLLESLSKEL--RVLEALSPPITEANKTVFGHTLQNAVNLVQELRAELVRPFPTLAQGPPPAPQDPTKVERDVSNAVGGGAVGNTVGKMASLAFGFGRMVKKQAVAVVERANAAMVENTSKETLGRYSQWVESLFTQLQFLGVW 246
BLAST of mRNA_H-paniculata_contig3716.9800.1 vs. uniprot
Match: A0A7S3F7H9_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3F7H9_9EUKA) HSP 1 Score: 67.8 bits (164), Expect = 1.490e-9 Identity = 61/232 (26.29%), Postives = 104/232 (44.83%), Query Frame = 1
Query: 262 TEPEPSHPA---RRSYWVLRLVRSTILHGGYLTP--KLFAPKDIWTQVGLKLSGFSSRIAALEMILYMIIDRVRGLPKPADSEARKAAAQVMREFRANAHKL----------QTDLSRHFPYVVPVDPLSLAKEIGPKSNLGKLNNVMKKFGRNVKDTAVGAVERIGAGIQGRHMDDELVYYKQIVSELCDKCQVFDEWFLHLQDQIARNDTEEMDELLLELHLVASFMREV 912
T P P P RR++W+++++RS++ HGGY++P K++ P+ +W Q G K S ++ E+++ +E R+ A R+ R A +L Q L+R P+V +P K G S + K+ K +++ TA R+GA + + D Y Q + +L D ++W H A + E +L LH V+ F+ EV
Sbjct: 3 TPPPPLAPKEEWRRAFWLMKILRSSMHHGGYISPDGKVYVPQRVWVQKGGKFSALPAKSECAELLV---------------NEFRQVCAVDYRQPRHVARELERLVDILDSQQASLARLLPFVP--EPPDSGKRSGDSSAMSKMTERFKGLAKSLDKTAA----RLGA-MPSKCTDPH--EYIQTLVDLFDSSAFIEKWTEHY----ASSQAVEQGVILPRLHRVSRFLYEV 206
BLAST of mRNA_H-paniculata_contig3716.9800.1 vs. uniprot
Match: A0A1Y2DDX9_9FUNG (MIT domain-containing protein n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2DDX9_9FUNG) HSP 1 Score: 63.9 bits (154), Expect = 1.440e-7 Identity = 43/173 (24.86%), Postives = 87/173 (50.29%), Query Frame = 1
Query: 238 LELDPNHTTEPE--PSHPARRSYWVLRLVRSTILHGGYLTPKLFAPKDIWTQVGLKLSGFSSRIAALEMILYMIIDRVRGLPKPADSEARKAAAQVMREFRANAHKLQTDLSRHFPYVVPVDPLSLAKEIGPKSNLGKL------NNVMKK--FGRNVKDTAVGAVERIGAGI 726
L+ PN+ ++PE P R +W++RL+ ++L GGYLTP+++ P+ +W Q G+K S+ A + L + R++ S+ +A + + E ++ +QT LS+ Y+ + + + K N+ L N+M++ + ++ +AV + + +GI
Sbjct: 476 LKEKPNNESKPEMLPPKLILRPFWIMRLLSRSMLEGGYLTPRVYVPRQLWYQRGVKYIAIESKHQAC-VSLIQHLQRIKNTSIENSSDMYEALSILESEMKS----IQTVLSKKLKYIEEIIDIGPVISLDKKVNMSLLWKYGFELNLMREIPYENDITRSAVASKSAVDSGI 643
BLAST of mRNA_H-paniculata_contig3716.9800.1 vs. uniprot
Match: A0A0G2EWN4_9PEZI (Putative mit domain-containing protein n=1 Tax=Diplodia seriata TaxID=420778 RepID=A0A0G2EWN4_9PEZI) HSP 1 Score: 62.0 bits (149), Expect = 2.360e-7 Identity = 47/176 (26.70%), Postives = 83/176 (47.16%), Query Frame = 1
Query: 265 EPEPSHPARRSYWVLRLVRSTILH--GGYLTPKLFAPKDIWTQVGLKLSGFSSRIAALEMILYMIID--RVRGLPKPADSEARKAAAQVMREFRAN-AHKLQTDLS---RHFPYVVPVDPLSLAKEIGPKSNLGKLNNVMKKFGRNVKDTAV--GAVERIGAGIQGRHMDDELVYY 762
EP P R +W++R T+ H GGYL+ KLF P+DIW G+K+ +I+ ++++ ++ RV L A E +A V+ + ++N KL +++ R P + V P A +G + L V+ + R V+D + + +G + RH + +Y
Sbjct: 83 EPCPESYLLRPFWLMRCFYQTLAHPRGGYLSTKLFVPRDIWNVKGVKIKSVEEKISNIDLLTAALLKLGRVDTLDADATLEEMQALELVLDQVQSNLVKKLGSEVGTGGREVPDIEFVGPN--ANYMGSLTRLFDAVQVLDQIARQVEDPGLKHSSPTHVGLELSTRHAAEFFGFY 256 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3716.9800.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3716.9800.1 >prot_H-paniculata_contig3716.9800.1 ID=prot_H-paniculata_contig3716.9800.1|Name=mRNA_H-paniculata_contig3716.9800.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=320bp KNERNHHGQQQQQHNRRQAIRAIDAALKLLPEAVAESTGIKRHRDNYQARback to top mRNA from alignment at H-paniculata_contig3716:1352..12363+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3716.9800.1 ID=mRNA_H-paniculata_contig3716.9800.1|Name=mRNA_H-paniculata_contig3716.9800.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11012bp|location=Sequence derived from alignment at H-paniculata_contig3716:1352..12363+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3716:1352..12363+ >mRNA_H-paniculata_contig3716.9800.1 ID=mRNA_H-paniculata_contig3716.9800.1|Name=mRNA_H-paniculata_contig3716.9800.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1920bp|location=Sequence derived from alignment at H-paniculata_contig3716:1352..12363+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |