mRNA_H-paniculata_contig37148.9795.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig37148.9795.1 vs. uniprot
Match: A0A7H4LDI7_WHEAT (Genome assembly, chromosome: II n=2 Tax=Triticinae TaxID=1648030 RepID=A0A7H4LDI7_WHEAT) HSP 1 Score: 96.7 bits (239), Expect = 5.450e-21 Identity = 51/109 (46.79%), Postives = 72/109 (66.06%), Query Frame = 1
Query: 10 RKQQLGMWSSTEAEYVAAEESGKEGVYLRELLRSIGFGCRGSTTLFEDNKSAINLSKGSGSHCRTKHIGVRWHGIREWIREGILALKYVQTGDHLADILTKGLSRVQFR 336
+KQ++ SS EAEYVAA + + ++L L+R + G+TT+F DNKSAI L K H R+KHI VR+H IR+ + EG + +K++ TGD LADI TK L R +F+
Sbjct: 1176 QKQKIVALSSCEAEYVAATTAACQAIWLSRLMRDLLKEEAGATTIFIDNKSAIQLCKNPVCHDRSKHIDVRFHFIRKCVEEGKIRVKHIATGDQLADIFTKSLGRTRFQ 1284
BLAST of mRNA_H-paniculata_contig37148.9795.1 vs. uniprot
Match: A0A4Y9XMG5_9AGAM (Uncharacterized protein n=1 Tax=Dentipellis fragilis TaxID=205917 RepID=A0A4Y9XMG5_9AGAM) HSP 1 Score: 88.2 bits (217), Expect = 3.920e-20 Identity = 46/110 (41.82%), Postives = 67/110 (60.91%), Query Frame = 1
Query: 10 RKQQLGMWSSTEAEYVAAEESGKEGVYLRELLRSIGFGCRGSTTLFEDNKSAINLSKGSGSHCRTKHIGVRWHGIREWIREGILALKYVQTGDHLADILTKGLSRVQFRN 339
+KQ SSTEAEY+ + KE ++LR L + G T L DN+SA+ ++ H R KHI VR H + E ++EGIL L+Y+ TG+ +AD+LTKGL R + ++
Sbjct: 12 KKQPSTALSSTEAEYIMGAHAAKEAIWLRGFLAELWQPRSGPTILLMDNQSAMVIAWNPAFHARMKHIDVRHHFLHEKVKEGILDLEYIPTGEQVADVLTKGLPREKHKH 121
BLAST of mRNA_H-paniculata_contig37148.9795.1 vs. uniprot
Match: A0A1X7SFX4_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7SFX4_AMPQE) HSP 1 Score: 89.4 bits (220), Expect = 6.920e-20 Identity = 45/108 (41.67%), Postives = 69/108 (63.89%), Query Frame = 1
Query: 10 RKQQLGMWSSTEAEYVAAEESGKEGVYLRELLRSIGFGCRGSTTLFEDNKSAINLSKGSGSHCRTKHIGVRWHGIREWIREGILALKYVQTGDHLADILTKGLSRVQF 333
++Q S+ EAEY+A + +E V++REL + G TT+FEDN+SAI+++K H R KHIG+++H IRE + + +KY +T D +ADI TKGL+ +F
Sbjct: 63 KRQDCVALSTAEAEYMALASTAQEAVWMRELNADMNNKPNGPTTIFEDNQSAISMAKNPQFHGRAKHIGIKYHFIREQVSTESVQIKYCRTEDMVADIFTKGLTHEKF 170
BLAST of mRNA_H-paniculata_contig37148.9795.1 vs. uniprot
Match: A0A5N6P4R5_9ASTR (Pyruvate carboxyltransferase domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6P4R5_9ASTR) HSP 1 Score: 93.2 bits (230), Expect = 8.310e-20 Identity = 47/100 (47.00%), Postives = 68/100 (68.00%), Query Frame = 1
Query: 34 SSTEAEYVAAEESGKEGVYLRELLRSIGFGCRGSTTLFEDNKSAINLSKGSGSHCRTKHIGVRWHGIREWIREGILALKYVQTGDHLADILTKGLSRVQF 333
SSTEAEY++A + E ++LR +L+ +GF + STT++ DNKSAINLSK H R+KHI ++ H RE + + ++L+Y T LAD+LTK L R +F
Sbjct: 132 SSTEAEYISATAATCEAIWLRRILQDLGFEQKESTTIYCDNKSAINLSKNPVMHSRSKHIELKHHFFREMVMQKQVSLEYCSTHSQLADVLTKSLCREKF 231
BLAST of mRNA_H-paniculata_contig37148.9795.1 vs. uniprot
Match: A0A5N6MBA7_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6MBA7_9ASTR) HSP 1 Score: 93.2 bits (230), Expect = 8.410e-20 Identity = 50/113 (44.25%), Postives = 74/113 (65.49%), Query Frame = 1
Query: 10 RKQQLGMWSSTEAEYVAAEESGKEGVYLRELLRSIGFGCRGSTTLFEDNKSAINLSKGSGSHCRTKHIGVRWHGIREWIREGILALKYVQTGDHLADILTKGLSR---VQFRN 339
RKQ SS+EAEY+AA + +GV+LR +L +G TT+F DNKSAINLS+ H R+KHI ++ H IR+ +++ ++ L++ T + LAD+LTK S+ VQFR+
Sbjct: 388 RKQSTVALSSSEAEYIAATAAACQGVWLRRILEDLGCDQELPTTIFCDNKSAINLSRNPIMHSRSKHIELKHHFIRDLVKQNVIQLEFCGTNEQLADMLTKAFSKEKFVQFRS 500
BLAST of mRNA_H-paniculata_contig37148.9795.1 vs. uniprot
Match: A0A6G0WQK1_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WQK1_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 9.980e-20 Identity = 48/108 (44.44%), Postives = 69/108 (63.89%), Query Frame = 1
Query: 10 RKQQLGMWSSTEAEYVAAEESGKEGVYLRELLRSIGFGCRGSTTLFEDNKSAINLSKGSGSHCRTKHIGVRWHGIREWIREGILALKYVQTGDHLADILTKGLSRVQF 333
RKQ L S+TE E++AA E+ K V+LRELL + F T L DN+S I + S SH RTKHI +R+H I++ + EG++ L+Y+ T + +ADILT+G+ F
Sbjct: 378 RKQSLVGHSTTEVEFIAAAEAAKSIVWLRELLEEMSFVVNSPTYLHVDNQSTIQVVHRSSSHDRTKHIRLRFHFIKDLVEEGMIKLRYINTKEQVADILTRGIVLAHF 485
BLAST of mRNA_H-paniculata_contig37148.9795.1 vs. uniprot
Match: A0A1Y1N2L1_PHOPY (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1N2L1_PHOPY) HSP 1 Score: 91.3 bits (225), Expect = 1.460e-19 Identity = 46/105 (43.81%), Postives = 68/105 (64.76%), Query Frame = 1
Query: 10 RKQQLGMWSSTEAEYVAAEESGKEGVYLRELLRSIGFGCRGSTTLFEDNKSAINLSKGSGSHCRTKHIGVRWHGIREWIREGILALKYVQTGDHLADILTKGLSR 324
+KQ+ SSTEAEY+ E+ KEG+YLR++ +G +F DN SAI LS+ H R+KHI +R+H IRE ++ GI+++ ++ T + L+DILTK L R
Sbjct: 214 KKQKTVALSSTEAEYMGMTEALKEGIYLRKMFLELGLNDLSKMKMFNDNLSAIKLSENPTFHARSKHIDIRYHFIREALKNGIISIGHISTENMLSDILTKRLPR 318
BLAST of mRNA_H-paniculata_contig37148.9795.1 vs. uniprot
Match: UPI001E1BA65C (secreted RxLR effector protein 161-like n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BA65C) HSP 1 Score: 88.6 bits (218), Expect = 1.670e-19 Identity = 48/109 (44.04%), Postives = 69/109 (63.30%), Query Frame = 1
Query: 10 RKQQLGMWSSTEAEYVAAEESGKEGVYLRELLRSIGFGCRGSTTLFEDNKSAINLSKGSGSHCRTKHIGVRWHGIREWIREGILALKYVQTGDHLADILTKGLSRVQFR 336
+KQ+ S+TEAE+VA+ E+GKE V++ L+ + LF DN+SAI + + H RTKHI VR+H IRE +G++ KYV T + LADILTK L+ +F+
Sbjct: 86 KKQKCTAQSTTEAEFVASSEAGKEAVWILRGLKELEGDVPTPMELFMDNQSAIRIIRNPELHQRTKHIDVRYHFIRELQEQGVIDAKYVNTNEQLADILTKPLAAPRFQ 194
BLAST of mRNA_H-paniculata_contig37148.9795.1 vs. uniprot
Match: A0A8J2RPB7_9CRUS (Hypothetical protein n=1 Tax=Daphnia galeata TaxID=27404 RepID=A0A8J2RPB7_9CRUS) HSP 1 Score: 92.4 bits (228), Expect = 1.680e-19 Identity = 49/103 (47.57%), Postives = 66/103 (64.08%), Query Frame = 1
Query: 10 RKQQLGMWSSTEAEYVAAEESGKEGVYLRELLRSIGFGCRGSTTLFEDNKSAINLSKGSGSHCRTKHIGVRWHGIREWIREGILALKYVQTGDHLADILTKGL 318
R+Q SSTEAEYVAA + K ++ R+LL IG TTL DN+ AI+L K SG R+KHI V++H IR+ ++EG + ++Y+ T LADILTK L
Sbjct: 1284 RRQDCVSLSSTEAEYVAASAATKTVIWFRQLLDDIGCEQTSPTTLLCDNQGAISLVKNSGHQARSKHIDVKYHHIRDMVKEGAIHIEYIHTSQQLADILTKPL 1386
BLAST of mRNA_H-paniculata_contig37148.9795.1 vs. uniprot
Match: A0A4S4L116_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Bondarzewia mesenterica TaxID=1095465 RepID=A0A4S4L116_9AGAM) HSP 1 Score: 91.3 bits (225), Expect = 2.050e-19 Identity = 47/98 (47.96%), Postives = 63/98 (64.29%), Query Frame = 1
Query: 10 RKQQLGMWSSTEAEYVAAEESGKEGVYLRELLRSIGFGCRGSTTLFEDNKSAINLSKGSGSHCRTKHIGVRWHGIREWIREGILALKYVQTGDHLADI 303
+KQ SST+AEYVA + KE V+L L I C+G TTLF DN+SA+ +++ H RTKHIG R H +RE + +G L LKY+ TGD +AD+
Sbjct: 288 KKQGSTALSSTKAEYVAGTHAAKELVWLWALFAEISLPCKGPTTLFMDNQSAMAIAENPVYHARTKHIGARHHFLRERVEDGELELKYLPTGDQMADV 385 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig37148.9795.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig37148.9795.1 >prot_H-paniculata_contig37148.9795.1 ID=prot_H-paniculata_contig37148.9795.1|Name=mRNA_H-paniculata_contig37148.9795.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=104bp MWSSTEAEYVAAEESGKEGVYLRELLRSIGFGCRGSTTLFEDNKSAINLSback to top mRNA from alignment at H-paniculata_contig37148:1413..1751+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig37148.9795.1 ID=mRNA_H-paniculata_contig37148.9795.1|Name=mRNA_H-paniculata_contig37148.9795.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=339bp|location=Sequence derived from alignment at H-paniculata_contig37148:1413..1751+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig37148:1413..1751+ >mRNA_H-paniculata_contig37148.9795.1 ID=mRNA_H-paniculata_contig37148.9795.1|Name=mRNA_H-paniculata_contig37148.9795.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=624bp|location=Sequence derived from alignment at H-paniculata_contig37148:1413..1751+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |