mRNA_H-paniculata_contig37114.9789.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig37114.9789.1 vs. uniprot
Match: A0A6H5JYY6_9PHAE (SQHop_cyclase_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYY6_9PHAE) HSP 1 Score: 131 bits (330), Expect = 1.310e-34 Identity = 57/72 (79.17%), Postives = 64/72 (88.89%), Query Frame = 1
Query: 28 QQTDGGWGTHIECASTMFGTVLSYVSLRLLGVPSEDPACVKGVAFIRDNGGVVMAPSWAKFWLAVLGVYDWE 243
QQ DGGWGTHIECASTMFGTVLSY+SLRLLGV ED AC +G+ F+R+NGG MAPSWAKFW+AVLGVY+WE
Sbjct: 220 QQADGGWGTHIECASTMFGTVLSYISLRLLGVSVEDGACARGLKFVRENGGGSMAPSWAKFWMAVLGVYEWE 291
BLAST of mRNA_H-paniculata_contig37114.9789.1 vs. uniprot
Match: D8LFF9_ECTSI (Cycloartenol synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFF9_ECTSI) HSP 1 Score: 131 bits (330), Expect = 3.880e-34 Identity = 57/72 (79.17%), Postives = 64/72 (88.89%), Query Frame = 1
Query: 28 QQTDGGWGTHIECASTMFGTVLSYVSLRLLGVPSEDPACVKGVAFIRDNGGVVMAPSWAKFWLAVLGVYDWE 243
QQ DGGWGTHIECASTMFGTVLSY+SLRLLGV ED AC +G+ F+R+NGG MAPSWAKFW+AVLGVY+WE
Sbjct: 220 QQADGGWGTHIECASTMFGTVLSYISLRLLGVSVEDGACARGLKFVRENGGGSMAPSWAKFWMAVLGVYEWE 291
BLAST of mRNA_H-paniculata_contig37114.9789.1 vs. uniprot
Match: A0A813LWY9_POLGL (Hypothetical protein (Fragment) n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813LWY9_POLGL) HSP 1 Score: 116 bits (290), Expect = 1.070e-29 Identity = 48/72 (66.67%), Postives = 61/72 (84.72%), Query Frame = 1
Query: 28 QQTDGGWGTHIECASTMFGTVLSYVSLRLLGVPSEDPACVKGVAFIRDNGGVVMAPSWAKFWLAVLGVYDWE 243
QQ DGGWGTH+E STMFG+VL+YV+LRL+G + PAC++G F+R++GG + APSWAKFWLAVLGVY+WE
Sbjct: 208 QQEDGGWGTHVESPSTMFGSVLNYVTLRLVGAAVDSPACIEGRKFMREHGGALYAPSWAKFWLAVLGVYEWE 279
BLAST of mRNA_H-paniculata_contig37114.9789.1 vs. uniprot
Match: A0A812I188_9DINO (OSCPNX1 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812I188_9DINO) HSP 1 Score: 119 bits (298), Expect = 1.630e-29 Identity = 52/72 (72.22%), Postives = 61/72 (84.72%), Query Frame = 1
Query: 28 QQTDGGWGTHIECASTMFGTVLSYVSLRLLGVPSEDPACVKGVAFIRDNGGVVMAPSWAKFWLAVLGVYDWE 243
QQ DGGWG+HIE STMFGTVL+YV+LRL+GV SEDPAC +G AF+ +GG + APSWAKFWLA LGVYDW+
Sbjct: 199 QQQDGGWGSHIESPSTMFGTVLNYVALRLVGVDSEDPACKQGRAFLDQHGGALYAPSWAKFWLACLGVYDWD 270
BLAST of mRNA_H-paniculata_contig37114.9789.1 vs. uniprot
Match: A0A6U4XWX2_HEMAN (Terpene cyclase/mutase family member n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4XWX2_HEMAN) HSP 1 Score: 118 bits (295), Expect = 4.090e-29 Identity = 52/72 (72.22%), Postives = 58/72 (80.56%), Query Frame = 1
Query: 28 QQTDGGWGTHIECASTMFGTVLSYVSLRLLGVPSEDPACVKGVAFIRDNGGVVMAPSWAKFWLAVLGVYDWE 243
QQ DGGWGTHIE +STMFGTVLSYVSLRLLGVPS D C+ FIR GG V PSWAKFWL++LGV++WE
Sbjct: 259 QQADGGWGTHIEASSTMFGTVLSYVSLRLLGVPSGDTQCIHAREFIRSKGGAVTCPSWAKFWLSLLGVHEWE 330
BLAST of mRNA_H-paniculata_contig37114.9789.1 vs. uniprot
Match: A0A7S1CYZ6_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CYZ6_CYCTE) HSP 1 Score: 108 bits (269), Expect = 6.770e-29 Identity = 48/69 (69.57%), Postives = 54/69 (78.26%), Query Frame = 1
Query: 37 DGGWGTHIECASTMFGTVLSYVSLRLLGVPSEDPACVKGVAFIRDNGGVVMAPSWAKFWLAVLGVYDWE 243
DGGWGTHIE STMFGTVL YV+LRLLG +DP CVKG AFIRDNGG +M SWAKF L +LG +W+
Sbjct: 1 DGGWGTHIESPSTMFGTVLMYVALRLLGKDMDDPICVKGRAFIRDNGGAIMTSSWAKFSLCLLGCMEWD 69
BLAST of mRNA_H-paniculata_contig37114.9789.1 vs. uniprot
Match: A0A813BLP7_9DINO (Terpene cyclase/mutase family member n=5 Tax=Symbiodinium TaxID=2949 RepID=A0A813BLP7_9DINO) HSP 1 Score: 116 bits (291), Expect = 1.410e-28 Identity = 50/72 (69.44%), Postives = 60/72 (83.33%), Query Frame = 1
Query: 28 QQTDGGWGTHIECASTMFGTVLSYVSLRLLGVPSEDPACVKGVAFIRDNGGVVMAPSWAKFWLAVLGVYDWE 243
QQ DGGWG+HIE STMFGTVL+YV+LRL GV ++DPAC KG F++ +GG + APSWAKFWLA LGVYDW+
Sbjct: 196 QQQDGGWGSHIESPSTMFGTVLNYVALRLAGVDADDPACKKGREFMQQHGGALYAPSWAKFWLACLGVYDWD 267
BLAST of mRNA_H-paniculata_contig37114.9789.1 vs. uniprot
Match: A0A6T5V9R7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A6T5V9R7_9STRA) HSP 1 Score: 112 bits (280), Expect = 5.200e-28 Identity = 49/72 (68.06%), Postives = 57/72 (79.17%), Query Frame = 1
Query: 28 QQTDGGWGTHIECASTMFGTVLSYVSLRLLGVPSEDPACVKGVAFIRDNGGVVMAPSWAKFWLAVLGVYDWE 243
QQ DGGWGTHIECASTMFGT+LSY+SLRLLG+ S + G F+ D+GG APSWAKFWLA +GVYDW+
Sbjct: 190 QQEDGGWGTHIECASTMFGTILSYISLRLLGISSNEDFMKLGRKFLLDHGGARYAPSWAKFWLASIGVYDWK 261
BLAST of mRNA_H-paniculata_contig37114.9789.1 vs. uniprot
Match: A0A482SSA2_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SSA2_9ARCH) HSP 1 Score: 114 bits (286), Expect = 6.560e-28 Identity = 53/82 (64.63%), Postives = 64/82 (78.05%), Query Frame = 1
Query: 7 ESTVSFL---QQTDGGWGTHIECASTMFGTVLSYVSLRLLGVPSEDPACVKGVAFIRDNGGVVMAPSWAKFWLAVLGVYDWE 243
E +++L QQ DGGWGTHIECASTMFGTVL+YV+LRLLGV +++ KG FI GG + APSWAKFWLAV+GVYDW+
Sbjct: 133 EGMIAYLKNHQQLDGGWGTHIECASTMFGTVLNYVALRLLGVSADEEYMKKGREFILKWGGALFAPSWAKFWLAVIGVYDWD 214
BLAST of mRNA_H-paniculata_contig37114.9789.1 vs. uniprot
Match: A0A812RL08_SYMPI (Terpene cyclase/mutase family member (Fragment) n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812RL08_SYMPI) HSP 1 Score: 114 bits (285), Expect = 8.580e-28 Identity = 48/72 (66.67%), Postives = 61/72 (84.72%), Query Frame = 1
Query: 28 QQTDGGWGTHIECASTMFGTVLSYVSLRLLGVPSEDPACVKGVAFIRDNGGVVMAPSWAKFWLAVLGVYDWE 243
QQ DGGWG+HIE STMFGTVL+YV+LRL GV ++DPAC +G F++++GG + APSWAKFWLA LGVY+W+
Sbjct: 52 QQQDGGWGSHIESPSTMFGTVLNYVALRLAGVDADDPACKEGRKFMQEHGGALYAPSWAKFWLACLGVYEWD 123 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig37114.9789.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig37114.9789.1 >prot_H-paniculata_contig37114.9789.1 ID=prot_H-paniculata_contig37114.9789.1|Name=mRNA_H-paniculata_contig37114.9789.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=81bp MSESTVSFLQQTDGGWGTHIECASTMFGTVLSYVSLRLLGVPSEDPACVKback to top mRNA from alignment at H-paniculata_contig37114:312..554- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig37114.9789.1 ID=mRNA_H-paniculata_contig37114.9789.1|Name=mRNA_H-paniculata_contig37114.9789.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=243bp|location=Sequence derived from alignment at H-paniculata_contig37114:312..554- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig37114:312..554- >mRNA_H-paniculata_contig37114.9789.1 ID=mRNA_H-paniculata_contig37114.9789.1|Name=mRNA_H-paniculata_contig37114.9789.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=486bp|location=Sequence derived from alignment at H-paniculata_contig37114:312..554- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |