mRNA_H-paniculata_contig3709.9784.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3709.9784.1
Unique NamemRNA_H-paniculata_contig3709.9784.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig3709.9784.1 vs. uniprot
Match: D8LNM6_ECTSI (DDE_3 domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LNM6_ECTSI)

HSP 1 Score: 531 bits (1369), Expect = 6.530e-178
Identity = 274/398 (68.84%), Postives = 318/398 (79.90%), Query Frame = 1
Query:  355 FIDDFVDKLKPRTGEVLCNLQSKLVLMLLFALRKDGVSENQSVLQVASTFKIGHSKVRDVNNHWWDNSTLLEITDEGRGKVTKNDDSRRRLTQDQEDQLYTFINDEHKAGRQVFRRTVAEWMI*HCNPDKEVSNRAVGGLLQRLGYRRRRGRIKTPPLDAKRLARIRLFLVEMDIAKRAEDAGLAVLVYINESFVHQAHGSAYSYSPTDKNGVVEDGMGRTTGKGLRMIMVHAITKWGPLVARGTNNDFPIEEGWFKRKDNGRGKQGGKGFNMTKEKTAEFLWQAKLAKGDYHAAMADTMFMEWLEHCLTPAFNANPEFRGKKMILVLENASYNHGFDSEVKVLETNNKVYNVGLLRKCGAGAITVKRAAANDTVVEHRFQVPTEPGSSMVLRCEAGG 1548
            ++D  V ++KP+ GEV  +LQS++VLMLLF LRK+G SEN++VLQVA TFKIGH KVR +NNHWWD+  L E T  GRGK+ K DD RRRLT+ Q DQL  FINDEHKAGRQVFRRTVAEW+   CN + + SNR+VGGLL RLGY+RRRGRIKTPPL+A+RLARIR FLVEMD+AKRAEDAGLAV+VY++ESFVHQAHGS YSY P+D+NGVV+DG+GRTTGKGLRMIMVHAITKWGPL      + FPIEEGWFK   +G+ K       M  E+TAEFLWQAKLAKGDYHAAM D+MFMEWLEH L+PA+NA PEF GKKMILVL+NASY+HGFD+EVKV ETN K +NV LLRK GA +I VKR       VEH F+VP+EPGSS       GG
Sbjct:  117 YMDTSVHEVKPKKGEVWTHLQSRMVLMLLFDLRKEGRSENEAVLQVARTFKIGHDKVRRINNHWWDHRQLYETTAAGRGKMAKEDDGRRRLTEVQADQLREFINDEHKAGRQVFRRTVAEWVHRTCNME-QPSNRSVGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDENGVVQDGIGRTTGKGLRMIMVHAITKWGPLAK--FCDGFPIEEGWFKETGSGKKK-------MEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFEGKKMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRKFGAKSIRVKRKEGEQGFVEHNFEVPSEPGSSFPAGNREGG 504          
BLAST of mRNA_H-paniculata_contig3709.9784.1 vs. uniprot
Match: A0A6H5KAU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAU4_9PHAE)

HSP 1 Score: 507 bits (1306), Expect = 1.700e-171
Identity = 269/418 (64.35%), Postives = 316/418 (75.60%), Query Frame = 1
Query:  355 FIDDFVDKLKPRTGEVLCNLQSKLVLMLLFALRKDGVSENQSVLQVASTFKIGHSKVRDVNNHWWDNSTLLEITDEGRGKVTKNDDSRRRLTQDQEDQLYTFINDEHKAGRQVFRRTVAEWMI*HCNPDKEVSNRAVGGLLQRLGYRRRRGRIKTPPLDAKRLARIRLFLVEMDIAKRAEDAGLAVLVYINESFVHQAHGSAYSYSPTDKNGVVEDGMGRTTGKGLRMIMVHAITKWGPLVARGTNNDFPIEEGWFKRKDNGRGKQGGKGFNMTKEKTAEFLWQAKLAKGDYHAAMADTMFMEWLEHCLTPAFNANPEFRGKKMILVLENASYNHGFDSEVKVLETNNKVYNVGLLRKCGAGAITVKRAAANDTVVEHRFQVPTEPGSSMVLRCEAGGRC*QRGGRVSHSRVFPPSLP 1608
            ++D  V ++KP+  EV   LQS++VLMLLF LRK G  EN++VLQVA TFKIGH KVR +NNHWWD+  L E T  GRGK  K DD RRRLT+ QEDQL  FINDEHKAGRQVFRRTVAEWM   CN + + SNR+ GGLL RLGY+RRRGRIKTPPL+A+RLARIR FLVEMD+AKRAEDAGLAV+VY++ESFVHQAHGS  SY P+D++GVV+DG+GRTTGKGLRMIMVHAITKWGPL        FPIEEGWFK  + G GK+      M  E+TAEFLWQ KLAKGD HAAM D+MFMEWLEH L PA+NA PEF+GK+MILVL+NASY+H FD+EVKV E+N K +NV LLR  GA +I+VKR      VV  + +  T+     +   E GGRC Q GG   HS ++PP  P
Sbjct:   56 YMDTSVHEVKPKKDEVWTQLQSRMVLMLLFDLRKGGCCENEAVLQVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNME-QPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPCSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCYG--FPIEEGWFK--ETGSGKK-----EMEDEETAEFLWQVKLAKGDNHAAMTDSMFMEWLEHRLNPAYNAIPEFKGKRMILVLDNASYHHEFDAEVKVPESNTKKHNVDLLRMFGAKSISVKRKEGEQGVVGVQLR-GTDRAWFFIPCREQGGRCKQSGGSNGHSGIYPPQSP 462          
BLAST of mRNA_H-paniculata_contig3709.9784.1 vs. uniprot
Match: A0A6H5KIM5_9PHAE (DDE_3 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIM5_9PHAE)

HSP 1 Score: 513 bits (1321), Expect = 3.640e-171
Identity = 293/516 (56.78%), Postives = 340/516 (65.89%), Query Frame = 1
Query:    1 MGKTKGRRYPTGGATGRPSNVAKRAKTGAARDAQALDRLRVQLEEQQATLAALKAAVESSGKAVKAKEAAIAKKEANKERVAAKQQXXXXXXXXREQKLVEAAAHAAQQPKLSQAAHTFIDDFVDKLKPRTGEVLCNLQSKLVLMLLFALRKDGVSENQSVLQVASTFKIGHSKVRDVNNHWWDNSTLLEITDEGRGKVTKNDDSRRRLTQDQEDQLYTFINDEHKAGRQVFRRTVAEWMI*HCNPDKEVSNRAVGGLLQRLGYRRRRGRIKTPPLDAKRLARIRLFLVEMDIAKRAEDAGLAVLVYINESFVHQAHGSAYSYSPTDKNGVVEDGMGRTTGKGLRMIMVHAITKWGPLVARGTNNDFPIEEGWFKRKDNGRGKQGGKGFNMTKEKTAEFLWQAKLAKGDYHAAMADTMFMEWLEHCLTPAFNANPEFRGKKMILVLENASYNHGFDSEVKVLETNNKVYNVGLLRKCGAGAITVKRAAANDTVVEHRFQVPTEPGSSMVLRCEAGG 1548
            M K KGRR PTGG  GRPS   KRAKT AAR   A +RL+ +LE+Q+A LAA +                                                                                    +S++VLMLLF LRK G SE ++VL+VA TFKIGH KVR +NNHWWD+  L EIT  GRGK  K DD RRRLT+ QEDQL  FINDEHKAGRQVFRRTVAEWM   CN + + SNR+ GGLL RLGY+RRRGRIKTPPL+A+RLARIR FLVEM +AKRAEDAGLAV+VY++ESFVHQAHGS YSY P+D++GVV+DG+GRTTGKGLRMIMVHAITKWGPL      +  PIEEGWFK  + G GK+      M  E+TAEFLWQAKLAKGDYHAAM D+MFMEWLEH L+PA+NA PEF+GK+MILVL+NASY+HGFD+EVKV ETN K +NV LLR  GA +I V+R      VVE+ F+VPTEPGSS       GG
Sbjct:   12 MAKPKGRRQPTGGVVGRPSKSDKRAKTAAARGPLAQERLQAELEQQRAALAADR-----------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESRMVLMLLFDLRKGGCSEKEAVLKVARTFKIGHDKVRRINNHWWDHRQLYEITAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNME-QPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMVMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAK--LCDGLPIEEGWFK--ETGSGKK-----EMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNFEVPTEPGSSFPAGNREGG 470          
BLAST of mRNA_H-paniculata_contig3709.9784.1 vs. uniprot
Match: A0A6H5KKL0_9PHAE (DDE_3 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKL0_9PHAE)

HSP 1 Score: 492 bits (1266), Expect = 2.260e-165
Identity = 258/375 (68.80%), Postives = 294/375 (78.40%), Query Frame = 1
Query:  424 LVLMLLFALRKDGVSENQSVLQVASTFKIGHSKVRDVNNHWWDNSTLLEITDEGRGKVTKNDDSRRRLTQDQEDQLYTFINDEHKAGRQVFRRTVAEWMI*HCNPDKEVSNRAVGGLLQRLGYRRRRGRIKTPPLDAKRLARIRLFLVEMDIAKRAEDAGLAVLVYINESFVHQAHGSAYSYSPTDKNGVVEDGMGRTTGKGLRMIMVHAITKWGPLVARGTNNDFPIEEGWFKRKDNGRGKQGGKGFNMTKEKTAEFLWQAKLAKGDYHAAMADTMFMEWLEHCLTPAFNANPEFRGKKMILVLENASYNHGFDSEVKVLETNNKVYNVGLLRKCGAGAITVKRAAANDTVVEHRFQVPTEPGSSMVLRCEAGG 1548
            +VLMLLF LRK+G +EN++VLQVA TFKIGH KVR +NNHWWD+  L E T  GRGK  K DD RRRLT+ QEDQL  FINDEHKAGRQVFRRTVAEWM   CN + + SNR+  GLL RLGY+ RRGRIKTPPL+A+RLARIR FLVEMD+AKRAEDAGLAV+VYI+ SFVHQAHGS YSY P D++ VV+DG+GRTTGKGLR+IMVHAITKWGPL         PIEEGWFK  + G GK+      M  E+TAEFLWQAKLAKGDYHAAM D+MFMEWLEH L+PA+NA PEF+GK+MILVL+NASY+HGFD+EVKV ETN K +NV LLR  GA +I VKR      VVE  F+VPTEPGSS       GG
Sbjct:    1 MVLMLLFDLRKEGRAENEAVLQVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNME-QPSNRSAEGLLSRLGYKGRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYIDGSFVHQAHGSPYSYFPADEDEVVQDGIGRTTGKGLRVIMVHAITKWGPLAKLCVG--LPIEEGWFK--ETGSGKR-----EMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVKRKEGEQGVVEENFEVPTEPGSSFPAGNREGG 365          
BLAST of mRNA_H-paniculata_contig3709.9784.1 vs. uniprot
Match: A0A6H5JMA8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMA8_9PHAE)

HSP 1 Score: 484 bits (1246), Expect = 7.970e-162
Identity = 280/462 (60.61%), Postives = 330/462 (71.43%), Query Frame = 1
Query:    1 MGKTKGRRYPTGGATGRPSNVAKRAKTGAARDAQALDRLRVQLEEQQATLAALKAAVESSGKAVKAKEAAIAKKEANKERVAAKQQXXXXXXXXREQKLVEA--AAHAAQQPKLSQAAHTFIDDFVDKLKPRTGEVLCNLQSKLVLMLLFALRKDGVSENQSVLQVASTFKIGHSKVRDVNNHWWDNSTLLEITDEGRGKVTKNDDSRRRLTQDQEDQLYTFINDEHKAGRQVFRRTVAEWMI*HCNPDKEVSNRAVGGLLQRLGYRRRRGRIKTPPLDAKRLARIRLFLVEMDIAKRAEDAGLAVLVYINESFVHQAHGSAYSYSPTDKNGVVEDGMGRTTGKGLRMIMVHAITKWGPLVARGTNNDFPIEEGWFKRKDNGRGKQGGKGFNMTKEKTAEFLWQAKLAKGDYHAAMADTMFMEWLEHCLTPAFNANPEFRGKKMILVLENASYNHGFDSEVK 1380
            M K KGRR PTGG  GRPS   KRAKT AAR   A +RL+ +LE+Q+A LAA +                         R AA ++        REQ+ VE   AA AA   K++Q    ++D  V ++KP+ GEV   LQS++VLMLLF LRK G SE ++VL+VA TFKIGH KVR +NNHWWD+  L E T  GRGK  K DD RRRLT+ QEDQL  FINDEHKAGRQVFRRTVAEWM   CN + + SN + GGLL RLG +RRRGRIKTPPL A+RLARIR FLVEM +AKRAEDAGLAV+VY++ESFVHQAHGS YSY P+D +GVV+DG+GRTTGKGLRMIMVHAITKWGPL      +  PIEEGWFK  + G GK+      M  E+T EFLWQA LAKGDYHAAM D+MFMEWLEH L+PA+NA PEF+GK+M+LVL+ ASY+HGFD+EVK
Sbjct:   37 MAKPKGRRQPTGGVVGRPSKSDKRAKTAAARGPLAQERLQAELEQQRAALAADRXXXXXXXXXXXXXXXXXXXXXXEMARAAAPREM-------REQQDVERVQAAAAAAAEKVAQGLD-YMDTSVHEVKPKKGEVWTQLQSRMVLMLLFDLRKGGCSEKEAVLKVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNME-QPSNGSAGGLLSRLGCKRRRGRIKTPPLKAERLARIRRFLVEMVMAKRAEDAGLAVIVYVDESFVHQAHGSPYSYFPSDDDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAK--LCDGLPIEEGWFK--ETGSGKK-----EMEDEETVEFLWQATLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMVLVLDYASYHHGFDAEVK 480          
BLAST of mRNA_H-paniculata_contig3709.9784.1 vs. uniprot
Match: A0A6H5KDX7_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX7_9PHAE)

HSP 1 Score: 476 bits (1224), Expect = 7.530e-159
Identity = 245/355 (69.01%), Postives = 282/355 (79.44%), Query Frame = 1
Query:  484 LQVASTFKIGHSKVRDVNNHWWDNSTLLEITDEGRGKVTKNDDSRRRLTQDQEDQLYTFINDEHKAGRQVFRRTVAEWMI*HCNPDKEVSNRAVGGLLQRLGYRRRRGRIKTPPLDAKRLARIRLFLVEMDIAKRAEDAGLAVLVYINESFVHQAHGSAYSYSPTDKNGVVEDGMGRTTGKGLRMIMVHAITKWGPLVARGTNNDFPIEEGWFKRKDNGRGKQGGKGFNMTKEKTAEFLWQAKLAKGDYHAAMADTMFMEWLEHCLTPAFNANPEFRGKKMILVLENASYNHGFDSEVKVLETNNKVYNVGLLRKCGAGAITVKRAAANDTVVEHRFQVPTEPGSSMVLRCEAGG 1548
            +QVA TFKIGH KVR +NNHWWD+  L E T  GRGK  K DD RRRLT+ QEDQL  FINDEHKAGRQVFRRTVAEWM   CN + + SNR+ GGLL RLGY+RRRGRIKTPPL+A+RLARIR FLVEMD+AKRAEDAGLAV+VY++ESFVHQAHGS YSY P+D++GVV+DG+GRTTGKGLRMIMVHAITKWGPL      +  PIEEGWFK  + G GK+      M  E+TAEFLWQAKLAKGDYHAAM D+MFMEWLEH L+PA+NA PEF+GK+MILVL+NASY+HGFD+EVKV E+N K +NV LLR  GA +I V+R      VVE+  +VPTEPGSS       GG
Sbjct:    9 VQVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNME-QPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAK--LCDGLPIEEGWFK--ETGSGKK-----EMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPESNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNLEVPTEPGSSFPAGNREGG 353          
BLAST of mRNA_H-paniculata_contig3709.9784.1 vs. uniprot
Match: A0A6H5JR41_9PHAE (DDE_3 domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR41_9PHAE)

HSP 1 Score: 469 bits (1206), Expect = 9.340e-154
Identity = 245/355 (69.01%), Postives = 281/355 (79.15%), Query Frame = 1
Query:  484 LQVASTFKIGHSKVRDVNNHWWDNSTLLEITDEGRGKVTKNDDSRRRLTQDQEDQLYTFINDEHKAGRQVFRRTVAEWMI*HCNPDKEVSNRAVGGLLQRLGYRRRRGRIKTPPLDAKRLARIRLFLVEMDIAKRAEDAGLAVLVYINESFVHQAHGSAYSYSPTDKNGVVEDGMGRTTGKGLRMIMVHAITKWGPLVARGTNNDFPIEEGWFKRKDNGRGKQGGKGFNMTKEKTAEFLWQAKLAKGDYHAAMADTMFMEWLEHCLTPAFNANPEFRGKKMILVLENASYNHGFDSEVKVLETNNKVYNVGLLRKCGAGAITVKRAAANDTVVEHRFQVPTEPGSSMVLRCEAGG 1548
            +QVA TFKIGH KVR +NNHWWD+  L E T  GRGK  K DD RRRLT+ QEDQL  FINDEHKAGRQVFRRTVAEWM   CN + + SNR+ GGLL RLGY+RRRGRIKTPPL+A+RLARIR FLV M++AKRAEDAGLAV+VY++ESFVHQAHGS YSY P+D++GVV+DG+GRTTGKGLRMIMVHAITKWGPL      +  PIEEGWFK  + G GK+      M  E+TAEFLWQAKLAKGDYHAAM D+MFMEWLEH L+PA+NA PEF+GK+MILVL+NASY+HGF SEVKV ETN K +NV LLR  GA +I V+R      VVE+ F+VPTEPGSS       GG
Sbjct:  137 VQVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNME-QPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLV-MNMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAK--LCDGLPIEEGWFK--ETGSGKK-----EMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFVSEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNFEVPTEPGSSFPAGNREGG 480          
BLAST of mRNA_H-paniculata_contig3709.9784.1 vs. uniprot
Match: A0A6H5KDX2_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX2_9PHAE)

HSP 1 Score: 434 bits (1116), Expect = 2.110e-140
Identity = 247/447 (55.26%), Postives = 301/447 (67.34%), Query Frame = 1
Query:  283 REQKLVEAAAHAAQQPKLSQAAHTFIDDFVDKLKPRTGEVLCNLQSKLVLMLLFALRKDGVSENQSVLQVASTFKIGHSKVRDVNNHWWDNSTLLEITDEGRGKVTKNDDSRRRLTQDQEDQLYTFINDEHKAGRQVFRRTVAEWMI*HCNPDKEVSNRAVGGLLQRLGYRRRRGRIKTPPLDAKRLARIRLFLVEMDIAKRAEDAGLAVLVYINESFVHQAHGSAYSYSPTDKNGVVEDGMGRTTGKGLRMIMVHAITKWGPLVARGTNNDFPIEEGWFKRKDNG--RGKQGGKGFNMTKEKTAEFLWQAKLAKGDYHAAMADTMFMEWLEHCLTPAFNANPEFRGKKMILVLENASYNHGFDSEVKVLETNNKVYNVGLLRKCGAGAITVKRAAANDTVVEHRFQVPTEPGSSMVLRCEAGGRC*QRGGRVSHSRVFPPSLPRKA 1617
            REQ  V  AA AA   KL   A  F++D V  L+P+TGE+    QS+++LML F L K G SEN +  QVA T +IG  KV  V   W+D   L E   +GRGK T  DD RR +T++QED L  FI  EH+AGRQVFRRTV +++   C+   E+SNRAVGGLLQRLG++RRRGRIK PPL+ +R  RIRLFLV+MD+AKRAEDAG+AV+VY++ESFVHQAHGSAYSY P+D  G+V+DG+GRTTGKGLRMIMVHAIT+ GPL        FPI EGWFK K+N   + K G   F M+ E+TAEFLWQAKLA GDYH AM D MFM+WL+H LTPAF+A  +F+ KKM LVL+NASY+H FD EVKV ETN+K YNV LLRK G  +  V R +      E+ F+VP +       R            R    + FP  L  KA
Sbjct:   60 REQDRVSKAAEAATS-KLPPLALKFVEDSVQSLRPKTGELTTLQQSRIILMLYFDLVKGGSSENHAKEQVAKTLRIGTDKVLAVRTLWYDKQELYETNGKGRGKATSVDDGRRVITKEQEDGLREFIKGEHEAGRQVFRRTVKDYL--ECSFGLEMSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGIAVIVYMDESFVHQAHGSAYSYFPSDDKGIVQDGIGRTTGKGLRMIMVHAITEHGPLAE--LQEGFPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDA--QFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRESEGKAA-EYNFEVPAQGSLPNANRNGVSKEEIASVTRTYFKKNFPQKLEEKA 498          
BLAST of mRNA_H-paniculata_contig3709.9784.1 vs. uniprot
Match: A0A6H5KF49_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF49_9PHAE)

HSP 1 Score: 416 bits (1068), Expect = 1.090e-134
Identity = 225/405 (55.56%), Postives = 286/405 (70.62%), Query Frame = 1
Query:  355 FIDDFVDKLKPRTGEVLCNLQSKLVLMLLFALRKDGVSENQSVLQVASTF-----KIGHSKVRDVNNHWWDNSTLLEITDEGRGKVTKNDDSRRRLTQDQEDQLYTFINDEHKAGRQ--VFRRTVAEWMI*HCNPDKEVSNRAVGGLLQRLGYRRRRGRIKTPPLDAKRLARIRLFLVEMDIAKRAEDAGLAVLVYINESFVHQAHGSAYSYSPTDKNGVVEDGMGRTTGKGLRMIMVHAITKWGPLVARGTNNDFPIEEGWFKRKDNGRGKQGGKGFNMTKEKTAEFLWQAKLAKGDYHAAMADTMFMEWLEHCLTPAFNANPEFRGKKMILVLENASYNHGFDSEVKVLETNNKVYNVGLLRKCGAGAITVKRAAANDTVVEHRFQVPTEPGSSMVLRCEAGG 1548
            ++++  +++KP+TG  LC  QS+++L+LL +LRKDG SEN+++L+V+        + G ++ + +        T   + D  RG+                         +H+ GR   +  RT        C  +++ SNR+VGGLL RLGY+RRRGRIKTP LDA RLARIR FLVEMDIAKRAEDAGLAV+VY++ESFVHQAHGS YSY P+D++GVV+DG+GRTTGKGLRMIMVHAITKWGPL      + FPIEEGWFK K  G+GK+GGK FN+  E+TAEFLWQAKLAKGDYHAAM D+MFMEWLE  L+PA+NA P+F+GKKMILV +NASY+ GFD+EVKV ETN K YNV LLR+ G  +I VKRAAAN  VV+ RF+VPT+ GS++      GG
Sbjct:  117 YLEESEERVKPKTGSTLCKTQSRMILLLLISLRKDGQSENEAILRVSGEHIQDRPREGQTRQQPLVG------TPRVVRDHLRGE-----------------------RQDHEEGRPAALCHRT--------CGFEEQPSNRSVGGLLSRLGYKRRRGRIKTPRLDAARLARIRRFLVEMDIAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAK--LCDGFPIEEGWFKSKGGGKGKRGGKDFNLEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLERRLSPAYNAVPDFKGKKMILVRDNASYHQGFDAEVKVPETNTKKYNVELLRRYGVRSIKVKRAAANGRVVQQRFEVPTDEGSTLPDARREGG 482          
BLAST of mRNA_H-paniculata_contig3709.9784.1 vs. uniprot
Match: A0A6H5KRM6_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRM6_9PHAE)

HSP 1 Score: 407 bits (1046), Expect = 6.370e-132
Identity = 230/427 (53.86%), Postives = 267/427 (62.53%), Query Frame = 1
Query:  484 LQVASTFKIGHSKVRDVNNHWWDNSTLLEITDEGRGKVTKNDDSRRRLTQDQEDQLYTFINDEHKAGRQVFRRTVAEWMI*HCNPDKEVSNRAVGGLLQRLGYRRRRGRIKTPPLDAKRLARIRLFLVEMDIAKRAEDAGLAVLVYINESFVHQAHGSAYSYSPTDKNGVVEDGMGRTTGKGLRMIMVHAITKWGPL---------------------------------------------------VARGTN---------------------NDFPIEEGWFKRKDNGRGKQGGKGFNMTKEKTAEFLWQAKLAKGDYHAAMADTMFMEWLEHCLTPAFNANPEFRGKKMILVLENASYNHGFDSEVKVLETNNKVYNVGLLRKCGAGAITVKRAAANDTVVEHRFQVPTEPGSSMVLRCEAGG 1548
            +QVA TFKIGH KVR +NNHWWD+  L E T  GRGK  K DD RRRLT+               AGRQVFRRTVAEWM   CN + ++SNR+ GGLL RLGY+RRRGRIKTPPL+A+RLARIR FLVEMD+AKRAEDAGLAV+VY++ESFVHQAHGS Y Y P+D++G V+DG+GRTTGKGLRMIMVHAITKWGPL                                                   + R T                      +  PIEEGWFK  + G GK+      M  E+TAE +WQAKLAKGDYHAAM D+MFMEWLEH L+PA+NA  EF+G +MILVL+NASY+HGFD+EVKV ETN K  NV LLR  GA  I V+R       VE+ F+VPTEPGSS       GG
Sbjct:    9 VQVAHTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTE---------------AGRQVFRRTVAEWMHRTCNME-QLSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYPYFPSDEDGAVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCDGLPIEXRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDDDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCDGLPIEEGWFK--ETGSGKK-----EMEDEETAEIMWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAILEFKGNRMILVLDNASYHHGFDAEVKVPETNTKKQNVDLLRMFGAKPIRVRRKEGEQGSVEYNFEVPTEPGSSFPAGNREGG 412          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3709.9784.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNM6_ECTSI6.530e-17868.84DDE_3 domain-containing protein n=3 Tax=Ectocarpus... [more]
A0A6H5KAU4_9PHAE1.700e-17164.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KIM5_9PHAE3.640e-17156.78DDE_3 domain-containing protein n=4 Tax=Ectocarpus... [more]
A0A6H5KKL0_9PHAE2.260e-16568.80DDE_3 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A6H5JMA8_9PHAE7.970e-16260.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDX7_9PHAE7.530e-15969.01DDE_3 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JR41_9PHAE9.340e-15469.01DDE_3 domain-containing protein n=5 Tax=Ectocarpus... [more]
A0A6H5KDX2_9PHAE2.110e-14055.26Uncharacterized protein n=8 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF49_9PHAE1.090e-13455.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRM6_9PHAE6.370e-13253.86DDE_3 domain-containing protein n=1 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3709contigH-paniculata_contig3709:5941..8571 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size2068
Cds size726
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3709.9784.1prot_H-paniculata_contig3709.9784.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3709 7283..8571 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930143.6961956-UTR-H-paniculata_contig3709:5940..72821622930143.6961956-UTR-H-paniculata_contig3709:5940..7282Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3709 5941..7282 -
1691481164.5426323-UTR-H-paniculata_contig3709:5940..72821691481164.5426323-UTR-H-paniculata_contig3709:5940..7282Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3709 5941..7282 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930143.7124226-CDS-H-paniculata_contig3709:7282..75191622930143.7124226-CDS-H-paniculata_contig3709:7282..7519Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3709 7283..7519 -
1691481164.5510004-CDS-H-paniculata_contig3709:7282..75191691481164.5510004-CDS-H-paniculata_contig3709:7282..7519Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3709 7283..7519 -
1622930143.729926-CDS-H-paniculata_contig3709:8082..85711622930143.729926-CDS-H-paniculata_contig3709:8082..8571Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3709 8083..8571 -
1691481164.558524-CDS-H-paniculata_contig3709:8082..85711691481164.558524-CDS-H-paniculata_contig3709:8082..8571Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3709 8083..8571 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3709.9784.1

>prot_H-paniculata_contig3709.9784.1 ID=prot_H-paniculata_contig3709.9784.1|Name=mRNA_H-paniculata_contig3709.9784.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=242bp
MGKTKGRRYPTGGATGRPSNVAKRAKTGAARDAQALDRLRVQLEEQQATL
AALKAAVESSGKAVKAKEAAIAKKEANKERVAAKQQAKQQAHEQREQKLV
EAAAHAAQQPKLSQAAHTFIDDFVDKLKPRTGEVLCNLQSKLVLMLLFAL
RKDGVSENQSVLQVASTFKIGHSKVRDVNNHWWDNSTLLEITDEGRGKVT
KNDDSRRRLTQDQEDQLYTFINDEHKAGRQVFRRTVAEWMI*
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mRNA from alignment at H-paniculata_contig3709:5941..8571-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3709.9784.1 ID=mRNA_H-paniculata_contig3709.9784.1|Name=mRNA_H-paniculata_contig3709.9784.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2631bp|location=Sequence derived from alignment at H-paniculata_contig3709:5941..8571- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGGAAGACGAAGGGCAGGCGCTATCCCACCGGTGGCGCCACTGGCCG CCCGAGCAACGTGGCAAAAAGGGCCAAAACTGGTGCGGCGAGAGATGCTC AGGCTCTCGACAGACTCAGGGTTCAGCTTGAGGAGCAGCAGGCAACGCTA GCGGCGCTCAAGGCGGCGGTCGAGTCGAGCGGGAAAGCTGTCAAGGCGAA AGAGGCAGCGATTGCCAAGAAGGAGGCAAATAAAGAGCGCGTCGCTGCAA AGCAACAAGCGAAACAGCAAGCGCACGAACAGCGAGAGCAGAAGCTAGTC GAAGCGGCTGCTCACGCAGCACAGCAGCCGAAGCTTTCACAGGCAGCCCA CACCTTCATCGACGACTTTGTGGACAAGCTGAAGCCTCGAACTGGCGAGG TCTTGTGCAATCTCCAGTCGAAGCTGGTTCTCATGCTGCTGTTTGCTCTT CGCAAGGACGGCGTCTCTGAGAATCAATCGGTGCTTCAGGTCAGTACGAG TACAGTTAGCAAGTTTATTTTATATTGACATTACAAGTGTCTGTTTTGTG TTGCTTAAAGTATGCTGTACAGCAGCAGTTTTTGCGGCATGTTAATTTAA AGCATACGTCTTTTCGCGCCCTTTTCGGTCTTGCTGTCTGTACGAACATG GTTGCACTGCTGTCTGCTGTACTGTGCGCACCGCTGTTCGTACGGTTCGT AACCACTACTGTCTGTACGGTGCACACTGCTGTCCGCACAGTGCACACAG CTGCATGTACGGTTGTGCACTGCTGTCCGCATAGTCCACACAGCTGCCTG TACGGTTGTGCACTGCTGTATGTACCGTACAACAGTGAGTTCGCTGTCTC CCAAATCCTCACCAGTGTACCCACGGCGATAACGCTGTTACGAATGGCGC CGCATGCGCATTTTCTGCCAAGGCTGTATGCTGTTAAACTTTTGCTCTCT GCTTGCACGGCTTGAGGTGTGCTGTCTTGGCAATTGTACTGACCCGACTC CCGTATGCCGATGCAATATGCGCTGCGCTCTGGACAACTGAAAGTCTGCC AGGTGGCGAGCACCTTCAAGATCGGCCATTCGAAAGTCAGAGACGTCAAC AACCACTGGTGGGACAACAGCACCCTGTTGGAAATCACCGACGAAGGAAG AGGCAAGGTCACCAAGAACGACGACAGCCGACGGCGTCTCACCCAAGATC AGGAGGACCAGCTTTACACGTTTATCAATGACGAGCACAAAGCCGGGCGC CAAGTCTTTCGTCGTACGGTGGCGGAGTGGATGATATAGCACTGCAACCC AGACAAGGAGGTGTCAAACCGCGCGGTAGGAGGGTTGCTGCAGAGGCTCG GTTATAGGCGCCGTAGGGGCAGGATCAAAACACCCCCGTTGGATGCTAAG AGGCTCGCGCGTATTCGTCTGTTTCTCGTTGAAATGGACATTGCGAAAAG GGCAGAGGATGCGGGGCTGGCAGTTCTTGTGTACATAAATGAGAGTTTTG TCCACCAGGCGCACGGTTCCGCGTATTCATACTCTCCTACTGACAAGAAT GGGGTTGTAGAGGATGGGATGGGTCGCACGACGGGGAAGGGCTTACGCAT GATTATGGTGCATGCAATCACGAAGTGGGGCCCGTTGGTTGCGCGTGGTA CCAATAATGACTTTCCAATCGAAGAGGGTTGGTTTAAGCGTAAGGACAAC GGTAGGGGAAAGCAAGGCGGTAAGGGCTTTAACATGACAAAGGAGAAAAC AGCAGAGTTTCTGTGGCAGGCCAAGTTGGCTAAGGGCGATTATCACGCGG CTATGGCCGATACGATGTTCATGGAGTGGCTTGAACACTGCCTTACCCCA GCTTTCAACGCTAACCCTGAGTTCAGGGGCAAGAAGATGATTCTTGTTCT TGAGAACGCCTCGTACAATCATGGTTTTGACTCGGAAGTCAAGGTTCTAG AAACCAATAACAAGGTGTACAATGTCGGACTGTTGCGTAAGTGTGGAGCG GGGGCAATCACGGTGAAGCGTGCCGCTGCCAACGACACAGTTGTGGAGCA CCGCTTCCAGGTACCAACAGAACCTGGTTCTTCGATGGTTCTTCGATGCG AGGCGGGCGGGCGGTGTTAGCAGAGAGGAGGTCGCGTTAGTCACTCGAGA GTTTTTCCGCCTTCACTACCTCGAAAAGCTTGAGGAGCGAGTGGAGACGT TCATGCGGCAGAAGGGGTGAGAGTTGATTTGGACACCGCCTTACATGCCG TCTTTTCAGCCGATAGAGTTGTTTTGGCAGCATGGTAAGCAGTACGTGAT GTTCAACTTTCAGCTGAAGCGAAAAATGCACGAGGTGTGGGAGCAGATTC GCAAAGGTTGGTACGGGGACCCGACGTGGCCAGGGCAGGAGGCGGGGTGG AACGCAGCCGATTGTTTCAAGTTGGTGGCGCACACCATTGGCGAGATGAA CAAGTGGATCAAGGATCGCGATGGACAGCTGCGTGGTACGATAGATAACC TTGAAGTTCCACAAGGGTATGATCAGGACGATGTATCACGTGTGAACGAG GCCGATGATGGGTTGGGGGAGCAGCTTAAACAGGATGACGATGAGTGGGA TGTGAGGGACGGCAACGATGAGATTGAGCCA
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Coding sequence (CDS) from alignment at H-paniculata_contig3709:5941..8571-

>mRNA_H-paniculata_contig3709.9784.1 ID=mRNA_H-paniculata_contig3709.9784.1|Name=mRNA_H-paniculata_contig3709.9784.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1452bp|location=Sequence derived from alignment at H-paniculata_contig3709:5941..8571- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGGAAGACGAAGGGCAGGCGCTATCCCACCGGTGGCGCCACTGGCCG
CCCGAGCAACGTGGCAAAAAGGGCCAAAACTGGTGCGGCGAGAGATGCTC
AGGCTCTCGACAGACTCAGGGTTCAGCTTGAGGAGCAGCAGGCAACGCTA
GCGGCGCTCAAGGCGGCGGTCGAGTCGAGCGGGAAAGCTGTCAAGGCGAA
AGAGGCAGCGATTGCCAAGAAGGAGGCAAATAAAGAGCGCGTCGCTGCAA
AGCAACAAGCGAAACAGCAAGCGCACGAACAGCGAGAGCAGAAGCTAGTC
GAAGCGGCTGCTCACGCAGCACAGCAGCCGAAGCTTTCACAGGCAGCCCA
CACCTTCATCGACGACTTTGTGGACAAGCTGAAGCCTCGAACTGGCGAGG
TCTTGTGCAATCTCCAGTCGAAGCTGGTTCTCATGCTGCTGTTTGCTCTT
CGCAAGGACGGCGTCTCTGAGAATCAATCGGTGCTTCAGATGGGGAAGAC
GAAGGGCAGGCGCTATCCCACCGGTGGCGCCACTGGCCGCCCGAGCAACG
TGGCAAAAAGGGCCAAAACTGGTGCGGCGAGAGATGCTCAGGCTCTCGAC
AGACTCAGGGTTCAGCTTGAGGAGCAGCAGGCAACGCTAGCGGCGCTCAA
GGCGGCGGTCGAGTCGAGCGGGAAAGCTGTCAAGGCGAAAGAGGCAGCGA
TTGCCAAGAAGGAGGCAAATAAAGAGCGCGTCGCTGCAAAGCAACAAGCG
AAACAGCAAGCGCACGAACAGCGAGAGCAGAAGCTAGTCGAAGCGGCTGC
TCACGCAGCACAGCAGCCGAAGCTTTCACAGGCAGCCCACACCTTCATCG
ACGACTTTGTGGACAAGCTGAAGCCTCGAACTGGCGAGGTCTTGTGCAAT
CTCCAGTCGAAGCTGGTTCTCATGCTGCTGTTTGCTCTTCGCAAGGACGG
CGTCTCTGAGAATCAATCGGTGCTTCAGGTGGCGAGCACCTTCAAGATCG
GCCATTCGAAAGTCAGAGACGTCAACAACCACTGGTGGGACAACAGCACC
CTGTTGGAAATCACCGACGAAGGAAGAGGCAAGGTCACCAAGAACGACGA
CAGCCGACGGCGTCTCACCCAAGATCAGGAGGACCAGCTTTACACGTTTA
TCAATGACGAGCACAAAGCCGGGCGCCAAGTCTTTCGTCGTACGGTGGCG
GAGTGGATGATATAGGTGGCGAGCACCTTCAAGATCGGCCATTCGAAAGT
CAGAGACGTCAACAACCACTGGTGGGACAACAGCACCCTGTTGGAAATCA
CCGACGAAGGAAGAGGCAAGGTCACCAAGAACGACGACAGCCGACGGCGT
CTCACCCAAGATCAGGAGGACCAGCTTTACACGTTTATCAATGACGAGCA
CAAAGCCGGGCGCCAAGTCTTTCGTCGTACGGTGGCGGAGTGGATGATAT
AG
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