mRNA_H-paniculata_contig3558.9450.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3558.9450.1 vs. uniprot
Match: D8LED3_ECTSI (WSC domain protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LED3_ECTSI) HSP 1 Score: 392 bits (1006), Expect = 1.500e-124 Identity = 310/594 (52.19%), Postives = 381/594 (64.14%), Query Frame = 1
Query: 1 RCIHGAAPLKSNANTTDIAQRHLEELTSNDTCGLLYYSEDYINGSIGETLFMCYTGNETYDCYTPAFAMEYMCEFLLFSEGGEETITQLNVRDYGEDAMQLLWKSSSVVGCAVDSCVRGGWHVNVLVCNYDSVAILEDSDLIEVEVGPPSVDPQECLD----DFPEPSQPTSSPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXPSPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGACGPNPCENGGTCSEDPDGGYVCTCPADFAGMKCQHNTAAMAKFNINVEFIGTWTESRKDVFLSAANRWAEVITHVPCGGSPDD--PAGRLLITAQLSEIDGSGGVLGSAGPNGIWNDCQTISYRGMMDFDISDITDMENQGTLEGVIMHEMGHVIGVGTLWGDCSSCRETFSSQWNCPAAVQVYNDLSGN-TGSSAGIVETDGQDGTRCGHFDEDDFGDELMTGWVSNGLMPLSKLTAASLEDIGYVVAAEKCDGYALIANRLPSVLSPDAIVPFELTDSVEDIHMDVQDSDGNIVEMKPGVRFRF 1761
RC+HGA PL + + A+ H EELTS CG L++S+ +G GE L++CY DC ++ M ++ + + +T+ ++R A ++LW S++ +GCA+ SCV V VLVCNYD + D IEVEVG P +EC D P P + XXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GAC PNPC NGG+C DP+GGY C+C + + GM C+ + M++F I V+F+GTW++ RK VF AANRW+E++TH+PC G+ + AG L IT+ L IDG G LG AGP G +NDC+ ISY G M FDI DI +ME QGT EGVI+HEMGHVIG GTLWG+CS C T S++W CP A QVYND GN GS A I+E +G GT CGHF E F DELMTG+V+ G MPLSKLT ASL D GYVV + K D Y + + R PS D ++L +S +D +DV + +G IV+ G R RF
Sbjct: 126 RCVHGAEPLAWDETMEETARDHAEELTSRQNCGYLFWSDVTAHG-YGENLYLCYGAA---DCMMYDGVLDTMYDYAV----DDGPVTEYDIR-----ARRMLWASTTKLGCAISSCVYQYIDVEVLVCNYDPIGDYGDPAAIEVEVGLPEQSEEECQQVAPPDTPSPGTTPAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTRAPVTPEPTPAPVKPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPGVGACNPNPCMNGGSCEVDPNGGYTCSCGSSYGGMMCETDVTGMSEFFITVDFLGTWSDERKGVFQRAANRWSEILTHIPCSGTNGNGGAAGELTITSTLEPIDGVYGTLGFAGPRGTYNDCRGISYSGEMTFDIDDIAEMERQGTFEGVILHEMGHVIGTGTLWGECSDCDSTGSAEWKCPLAAQVYNDFMGNPAGSRADIIELEGGTGTSCGHFSESTFEDELMTGFVNAGTMPLSKLTCASLADQGYVVQSSKADSYTVPSRRDPSARQ-DETKTYKLAESTDDTTIDVCNEEGEIVDTMQGKRIRF 705
BLAST of mRNA_H-paniculata_contig3558.9450.1 vs. uniprot
Match: D8LED1_ECTSI (PR1-like metalloprotease n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED1_ECTSI) HSP 1 Score: 380 bits (977), Expect = 4.400e-120 Identity = 333/628 (53.03%), Postives = 406/628 (64.65%), Query Frame = 1
Query: 1 RCIHGAAPLKSNANTTDIAQRHLEELTSNDTCGLLYYSEDYINGSIGETLFMCYTGNETYDCYTPAFAMEYMCEFLLFSEGGEETITQLNVRDYGEDAMQLLWKSSSVVGCAVDSCVRGGWHVNVLVCNYDSVAILEDSDLIEVEVGPPSVDPQECLD----DFPEPSQPTSSPVEXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------PSPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----ATGACGPNPCENGGTCSEDPDGGYVCTCPADFAGMKCQHNTAAMAKFNINVEFIGTWTESRKDVFLSAANRWAEVITHVPCGGSPDD--PAGRLLITAQLSEIDGSGGVLGSAGPNGIWNDCQTISYRGMMDFDISDITDMENQGTLEGVIMHEMGHVIGVGTLWGDCSSCRETFSSQWNCPAAVQVYNDLSGN-TGSSAGIVETDGQDGTRCGHFDEDDFGDELMTGWVSNGLMPLSKLTAASLEDIGYVVAAEKCDGYALIANRLPSVLSPDAIVPFELTDSVEDIHMDVQDSDGNIVEMKPGVRFRF 1761
RC+HGA PL + + A+ H EELTS CG L++S+ +G GE L++CY DC ++ M ++ + + +T+ ++R A ++LW S++ +GCA+ SCV V VLVCNYD + D IEVEVG P +EC D P P T +P XXXXXXXXXXXXXXXXXXXXXXXXXXX P+PV+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GAC PNPC NGG+C DP+GGY C+C + + GM C+ + M++F I V+F+GTW++ RK VF AANRW+E++TH+PC G+ + AG L IT+ L IDG G LG AGP G +NDC+ ISY G M FDI DI +ME QGT EGVI+HEMGHVIG GTLWG+CS C T S++W CP A QVYND GN GS A IVE +G GT CGHF E F DELMTG+V+ G MPLSKLT ASL D GYVV + K D Y + + R PS + ++L +S +D +DV + +G IV+ G R RF
Sbjct: 106 RCVHGAEPLAWDETMEETARGHAEELTSRQNCGYLFWSDVTAHG-YGENLYLCYGAA---DCMMYDGVLDTMYDYAV----DDGPVTEYDIR-----ARRMLWASTTKLGCAISSCVYQYIDVEVLVCNYDPIGDYGDPAAIEVEVGLPEQSEEECQQVAPPDTPSPGT-TPAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTRAPVTPEPTPAPVKPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPGVGACNPNPCMNGGSCEVDPNGGYTCSCGSSYGGMMCETDVTGMSEFFITVDFLGTWSDERKGVFQRAANRWSEILTHIPCSGTNGNGGAAGELTITSTLEPIDGVYGTLGFAGPRGTYNDCRGISYSGEMTFDIDDIAEMERQGTFEGVILHEMGHVIGTGTLWGECSDCDSTGSAEWKCPLAAQVYNDFMGNPAGSRADIVELEGGTGTSCGHFSESTFEDELMTGFVNAGTMPLSKLTCASLADQGYVVQSSKADSYTVPSRRDPSARQGETKT-YKLAESTDDTTIDVCNEEGEIVDTMQGKRIRF 718
BLAST of mRNA_H-paniculata_contig3558.9450.1 vs. uniprot
Match: D8LED2_ECTSI (Ig-like protein, group 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED2_ECTSI) HSP 1 Score: 332 bits (852), Expect = 4.620e-105 Identity = 164/308 (53.25%), Postives = 205/308 (66.56%), Query Frame = 1
Query: 847 GACGPNPCENGGTCSEDPDGGYVCTCPADFAGMKCQHNTAAMAKFNINVEFIGTWTESRKDVFLSAANRWAEVITHVPCGGSPDD--PAGRLLITAQLSEIDGSGGVLGSAGPNGIWNDCQTISYRGMMDFDISDITDMENQGTLEGVIMHEMGHVIGVGTLWGDCSSCRETFSSQWNCPAAVQVYNDLSGN-TGSSAGIVETDGQDGTRCGHFDEDDFGDELMTGWVSNGLMPLSKLTAASLEDIGYVVAAEKCDGYALIANRLPSVLSPDAIVPFELTDSVEDIHMDVQDSDGNIVEMKPGVRFRF 1761
GAC PNPC NGG+C DP+GGY C+C + + M C+ + M++F I V+F+G+WT+ RK VF SAANRW+EV+T +PC G+ + AG L IT+ L IDG G LG AGP G ++DC+ ISY G M FDI DI +ME QGT EGVI+HEMGHVIG GTLWG+CS C T S++W CP A QVYND GN GS A I+E +G GT CGHF E F DELMTG+V G MPLSKLT ASL D GYVV K D Y + + R PS + ++L +S +D + V + +G IV+ G R RF
Sbjct: 125 GACDPNPCMNGGSCEVDPNGGYTCSCGSSYGAMMCETDVTGMSEFFITVDFLGSWTDERKGVFQSAANRWSEVLTRIPCSGTNGNRGAAGELTITSTLEPIDGVYGTLGFAGPRGTYSDCRGISYSGEMTFDIDDIAEMERQGTFEGVILHEMGHVIGTGTLWGECSDCDSTSSAEWKCPLAAQVYNDFMGNPAGSRADIIELEGGTGTSCGHFSESTFKDELMTGYVKAGQMPLSKLTCASLADRGYVVQPAKADSYTVPSRRDPSARQGETKT-YKLAESTDDTTIGVCNEEGEIVDTMQGKRIRF 431
BLAST of mRNA_H-paniculata_contig3558.9450.1 vs. uniprot
Match: D7G7J6_ECTSI (Putative zinc metalloendopeptidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J6_ECTSI) HSP 1 Score: 303 bits (777), Expect = 2.670e-90 Identity = 243/495 (49.09%), Postives = 301/495 (60.81%), Query Frame = 1
Query: 1 RCIHGAAPLKSNANTTDIAQRHLEELTSNDTCGLLYYSEDYINGSIGETLFMCYTGNETYDCYTPAFAMEYMCEFLLFSEGGEETITQLNVRDYGEDAMQLLWKSSSVVGCAVDSCVRGGWHVNVLVCNYDSVAILEDSDLIEVEVGPPSVDPQECLDDFPEPSQPTSSPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXPSPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-----TGACGPNPCENGGTCSEDPDGGYVCTCPADFAGMKCQHNTAAMAKFNINVEFIGTWTESRKDVFLSAANRWAEVITHVPCGGSPDD--PAGRLLITAQLSEIDGSGGVLGSAGPNGIWNDCQTISYRGMMDFDISDITDMENQGTLEGVIMHEMGHVIGVGTLWGDCSSCRETFSSQWNCPAAVQVYNDLSGN-TGSSAGIVETDGQDG 1461
RC+HGA PL + + A+ H EELTS CG L++S+ +G GE L++CY DC ++ M ++ + + +T+ ++R A ++LW S++ +GCA+ SCV V VLVCNYD + D IEVEVG P +EC P P P+ P+P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXX XXXXXXXXXXXXXXXXXX GAC PNPC NGG+C DP+GGY C+C + + GM C+ + M++F I V+F+GTW++ RK VF AANRW+E++TH+PC G+ + AG L IT+ L IDG G LG AGP G +NDC+ ISY G M FDI DI +ME QGT EGVI+HEMGHVIG GTLWG+CS C T S++W CP A QVYND GN GS A IVE +G G
Sbjct: 258 RCVHGAEPLAWDETMEETARGHAEELTSRQNCGYLFWSDVTAHG-YGENLYLCYGAA---DCMMYDGVLDTMYDYAV----DDGPVTEYDIR-----ARRMLWASTTKLGCAISSCVYQYIDVEVLVCNYDPIGDYGDPAAIEVEVGLPEQSEEECQQVAP-PDTPSPGTT----------------------------PAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXSTRAPVTPEPTPXXXXXXXXXXXXXXXXXXVTDESPGVGACNPNPCMNGGSCEVDPNGGYTCSCGSSYGGMMCETDVTGMSEFFITVDFLGTWSDERKGVFQRAANRWSEILTHIPCSGTNGNGGAAGELTITSTLEPIDGVYGTLGFAGPRGTYNDCRGISYSGEMTFDIDDIAEMERQGTFEGVILHEMGHVIGTGTLWGECSDCDSTGSAEWKCPLAAQVYNDFMGNPAGSRADIVELEGGTG 710
BLAST of mRNA_H-paniculata_contig3558.9450.1 vs. uniprot
Match: D8LJN8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJN8_ECTSI) HSP 1 Score: 175 bits (443), Expect = 3.350e-44 Identity = 79/163 (48.47%), Postives = 110/163 (67.48%), Query Frame = 1
Query: 847 GACGPNPCENGGTCSEDPDGGYVCTCPADFAGMKCQHNTAAMAKFNINVEFIGTWT----ESRKDVFLSAANRWAEVITHVPCGGS-PDDPAGRLLITAQLSEIDGSGGVLGSAGPNGIWNDCQTISYRGMMDFDISDITDMENQGTLEGVIMHEMGHVIGVG 1320
G C PNPC N G+C DP+GGY C+C + + GM C+ +T + +F I +EF GTW +RKD+F +AA RW +V+TH+PC G+ P+ G L+I+ EIDGSGG GP+ ++ DC +SY G+M FD DI D+E+ G LEG+++HE+GHVIGVG
Sbjct: 381 GECNPNPCLNEGSCEVDPNGGYSCSCSSSYGGMNCETDTTGLPEFFITLEFDGTWDGALDATRKDIFQTAAKRWEKVVTHIPCTGTHPEGATGELIISVTQHEIDGSGGQFALGGPSDVYGDCPGVSYMGVMIFDSDDIDDLEDDGILEGLVVHEIGHVIGVG 543
BLAST of mRNA_H-paniculata_contig3558.9450.1 vs. uniprot
Match: A0A511NAJ7_9DEIO (Peptidase n=1 Tax=Deinococcus cellulosilyticus NBRC 106333 = KACC 11606 TaxID=1223518 RepID=A0A511NAJ7_9DEIO) HSP 1 Score: 155 bits (391), Expect = 5.410e-39 Identity = 96/226 (42.48%), Postives = 131/226 (57.96%), Query Frame = 1
Query: 979 FNINVEFIGTW--TESRKDVFLSAANRWAEVITH----VPCGGSPDDPAGRLLITAQLSEIDGSGGVLGSAGPNGIWNDCQTISYRGMMDFDISDITDMENQGTLEGVIMHEMGHVIGVGTLWG-------DCSSCRETFSSQWNCPAAVQVYNDLSGNTGSSAGIVETDGQDGTRCGHFDEDDFGDELMTGWVSNGLMPLSKLTAASLEDIGYVVAAEKCDGYAL 1617
F+I+++F T S+K +F AA+RW +VITH + GG+ D L+I A IDG GG+LG AGP I N ++ G+M FD +D+++ME G L VI+HEMGHV+G+GTLW + + C+ + S +N A+ YN L G GS VE G GT+CGH+ E F ELMTGW G MP+S++T ASL+D+GY V D Y L
Sbjct: 65 FDIDLDFSADTLLTTSQKAIFEQAASRWEQVITHGLSNINDGGTIYDD---LVIKASAVAIDGVGGILGQAGPEFIRNS-NSLPLSGIMQFDSADLSNMETSGILYNVILHEMGHVLGIGTLWDYLGFLTYNAADCQTSTSIVFNKANAIAQYNAL-GGAGSVP--VEDTGGAGTKCGHWRESIFDTELMTGWAEAGSMPMSRMTIASLKDLGYSVNLAAADTYTL 283
BLAST of mRNA_H-paniculata_contig3558.9450.1 vs. uniprot
Match: UPI0016675416 (Ig-like domain-containing protein n=2 Tax=Deinococcus roseus TaxID=392414 RepID=UPI0016675416) HSP 1 Score: 154 bits (389), Expect = 2.300e-37 Identity = 99/228 (43.42%), Postives = 127/228 (55.70%), Query Frame = 1
Query: 979 FNINVEF-IGT-WTESRKDVFLSAANRWAEVITH--VPCGGSPDDP---AGRLLITAQLSEIDGSGGVLGSAGPNGIWNDCQTISYRGMMDFDISDITDMENQGTLEGVIMHEMGHVIGVGTLW------GDCSSCRETFSSQWNCPAAVQVYNDLSGNTGSSAGIVETDGQDGTRCGHFDEDDFGDELMTGWVSNGLMPLSKLTAASLEDIGYVVAAEKCDGYALIA 1623
FNI + F GT T ++K F AANRW++VIT G+ D L ITA +IDG G +LG AGP I D + G+M FD +D+ ME +GTL+ VI+HEMGHV+G+GTLW C+ S +N AV Y L G TG+ VE G GT+CGH+ E F ELMTG+ NG MPLSKLT +LED+GY V+ D + + A
Sbjct: 212 FNITLVFPAGTKLTTTQKQAFTDAANRWSQVITEGLADFNGTAGDQILNVDDLQITADAIDIDGPGKILGQAGPEFI-RDENGLPITGLMRFDSADMASMEAKGTLKNVILHEMGHVLGIGTLWDKFIIQNGTPKCQTATSIFFNGARAVMQYKAL-GKTGNVP--VENSGGAGTKCGHWSESTFDSELMTGFAENGAMPLSKLTVGALEDLGYQVSYSAADAFVMPA 435
BLAST of mRNA_H-paniculata_contig3558.9450.1 vs. uniprot
Match: A0A6N6JG87_9RHOB (Peptidase n=1 Tax=Litoreibacter roseus TaxID=2601869 RepID=A0A6N6JG87_9RHOB) HSP 1 Score: 147 bits (371), Expect = 6.690e-37 Identity = 88/218 (40.37%), Postives = 126/218 (57.80%), Query Frame = 1
Query: 985 INVEFIGTWTESRKDVFLSAANRWAEVI-THVPCGGSPDDPAGRLLITAQLSEIDGSGGVLGSAGPNGIWNDCQTISYRGMMDFDISDITDMENQGTLEGVIMHEMGHVIGVGTLWG--DCSSCRETFSSQWNCPAAVQVYNDLSGNTGSSAGIVETDGQDGTRCGHFDEDDFGDELMTGWVSNGLMPLSKLTAASLEDIGYVVAAEKCDGYALIANR 1629
I V F GT+++ R++VFL AA RW +I T + I A ++EIDG GVLG AGP + D + + +G+M FD +D+T +E + + E VI+HEMGHV+G GTLW D T + Q+ AAV+ Y +L G +G+ V G GTR GH+ E FGDEL+TG++S P+S+++ A+ EDIGY V D + L + R
Sbjct: 2 ITVNFTGTFSDQRREVFLRAATRWDTIIDTSFDTVEVEGQRINGVAIDASINEIDGPQGVLGQAGPTVLLPDTE-LPAKGIMQFDDADLTRLEQENSFEDVILHEMGHVLGFGTLWQRKDLIIGSNTNNPQFTGQAAVREYAELVGGSGTGPVPVANSGGAGTREGHWRELVFGDELLTGFLSGSSRPISRMSIAAFEDIGYTVDYSAADPFFLPSFR 218
BLAST of mRNA_H-paniculata_contig3558.9450.1 vs. uniprot
Match: A0A170Q4G5_9BRAD (Zinc metalloendopeptidase leishmanolysin family CDS n=7 Tax=Bradyrhizobium TaxID=374 RepID=A0A170Q4G5_9BRAD) HSP 1 Score: 148 bits (374), Expect = 7.250e-37 Identity = 97/239 (40.59%), Postives = 128/239 (53.56%), Query Frame = 1
Query: 940 GMKCQHNTAAMAK--FNINVEFIGTWTESRKDVFLSAANRWAEVITHVPCGGSPDDPAG-----RLLITAQLSEIDGSGGVLGSAGPNGIWND----CQTISYRGMMDFDISDITDMENQGTLEGVIMHEMGHVIGVGTLWGDCSSCRETFSSQ--WNCPAAVQVYNDLSGNTGSSAGIVETDGQDGTRCGHFDEDDFGDELMTGWVSNGLMPLSKLTAASLEDIGYVVAAEKCDGYAL 1617
G + H AA+A + I V F+G T +K F AANRW TH G PD G L ITAQ ++IDG G +LG AGPN + + G M FD +D+ ME GTL VI HEMGHVIG+GT+W + + S +N P+A++ Y L G+ GS VE G GT H+ + FG ELMTG+V+ G P+S++T ASL+D+GY V + Y L
Sbjct: 15 GEEISHAAAAVAAGGYTIEVRFLGGLTPKQKAAFKLAANRW----THAIVGDLPDVTVGGERINNLRITAQGTDIDGPGRILGQAGPNRLRPQNAGAAAFLPATGDMQFDTADLAAMEADGTLNDVITHEMGHVIGIGTIWTNKKLLKRVDPSNPTFNGPSAMREYGKLRGSAGSLPVPVENTGGRGTVDSHWRDTVFGAELMTGFVNQGGNPMSRVTIASLQDLGYQVNMDAAQPYQL 249
BLAST of mRNA_H-paniculata_contig3558.9450.1 vs. uniprot
Match: UPI00166CECCE (peptidase n=1 Tax=Deinococcus roseus TaxID=392414 RepID=UPI00166CECCE) HSP 1 Score: 147 bits (372), Expect = 1.530e-36 Identity = 97/229 (42.36%), Postives = 126/229 (55.02%), Query Frame = 1
Query: 979 FNINVEFIG-TWTESRKDVFLSAANRWAEVITHVPCGGSPDDPA---------GRLLITAQLSEIDGSGGVLGSAGPNGIWNDCQTISYRGMMDFDISDITDMENQGTLEGVIMHEMGHVIGVGTLWGDC------SSCRETFSSQWNCPAAVQVYNDLSGNTGSSAGIVETDGQDGTRCGHFDEDDFGDELMTGWVSNGLMPLSKLTAASLEDIGYVVAAEKCDGYAL 1617
FNI + F + T ++K F AANRW+ VI G PD L ITA IDG G VLG AGP+ + ND + G M+FD +D+ ME GTL GVI+HEMGHV+G+GTLW S+C+ + +N A Y+ L G TG+ VE GT+CGH+ E FG+ELMTG+V+ G MPLSK+T +LED+GY V + Y L
Sbjct: 41 FNITLVFPNASLTPAQKTAFYDAANRWSSVIA----AGLPDASGTINGQSLKVDDLQITASAVSIDGVGKVLGRAGPDLVRNDTG-LPITGTMEFDSADLKLMEANGTLSGVILHEMGHVLGIGTLWSKFITYNGNSNCQGATAISFNGTHATTQYHSL-GKTGNVP--VENQYSAGTKCGHWSEALFGNELMTGFVNMGSMPLSKITVGALEDLGYKVNYNAAEAYTL 261 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3558.9450.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3558.9450.1 >prot_H-paniculata_contig3558.9450.1 ID=prot_H-paniculata_contig3558.9450.1|Name=mRNA_H-paniculata_contig3558.9450.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=588bp RCIHGAAPLKSNANTTDIAQRHLEELTSNDTCGLLYYSEDYINGSIGETLback to top mRNA from alignment at H-paniculata_contig3558:8449..15627+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3558.9450.1 ID=mRNA_H-paniculata_contig3558.9450.1|Name=mRNA_H-paniculata_contig3558.9450.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7179bp|location=Sequence derived from alignment at H-paniculata_contig3558:8449..15627+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3558:8449..15627+ >mRNA_H-paniculata_contig3558.9450.1 ID=mRNA_H-paniculata_contig3558.9450.1|Name=mRNA_H-paniculata_contig3558.9450.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3528bp|location=Sequence derived from alignment at H-paniculata_contig3558:8449..15627+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |