mRNA_H-paniculata_contig35540.9444.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig35540.9444.1 vs. uniprot
Match: UPI001AE8F203 (secreted RxLR effector protein 161-like n=1 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=UPI001AE8F203) HSP 1 Score: 145 bits (365), Expect = 3.740e-39 Identity = 91/229 (39.74%), Postives = 126/229 (55.02%), Query Frame = 1
Query: 1 LDDFFVGVGLQRSTTDSCLYFSRDEGGETDLLVAVYVDGMAIAGCHYPSREDFSTYKRIFRHLSTVPNLGITFGGRSNGHGLEGFVDTDWAEDVEDQKSTTGYVFKLNGGAIS*CSRKQQSVTWSSTLAEYVAAGEAGKETVYIGDLPGLIGFGCRGSTALFEDNKSAINLSKRSGAHCRTKQIGVRWHGIREWVWGGILALKYVQTGNQLVDILTKGLSRVKFQRLRN 687
+D+ V + RS S + S DL AV G C P E + K I R+L NLG+ + +SN L GF D+DWA D +D+KST+GY+F N G IS S+KQ+SV S+ AEY+A A +E ++I +L I C T +FEDN+S I+L+K H R K I +R+H RE V + L Y Q+ + + D+LTKGLS+VKF +L N
Sbjct: 27 VDEEIVKLIEYRSIVGSLINLSTRT--RPDLAFAV---GELARYCDAPGSEHWVALKIILRYLKNTKNLGLCYR-KSNKGELVGFSDSDWAGDHDDRKSTSGYIFLYNEGPISWKSQKQRSVALSTVKAEYMALSAASQECIWIRNLLCNIERSCDSPTVIFEDNQSTISLTKNPQYHGRAKHIDIRYHFTRELVEANKITLVYCQSEDMVADMLTKGLSKVKFVKLLN 249
BLAST of mRNA_H-paniculata_contig35540.9444.1 vs. uniprot
Match: UPI001E1BA65C (secreted RxLR effector protein 161-like n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BA65C) HSP 1 Score: 141 bits (355), Expect = 2.760e-38 Identity = 85/201 (42.29%), Postives = 113/201 (56.22%), Query Frame = 1
Query: 106 YVDGMAIAGCHYPSREDFSTYKRIFRHLSTVPNLGITFGGRSNGHGLEGFVDTDWAEDVEDQKSTTGYVFKLNGGAIS*CSRKQQSVTWSSTLAEYVAAGEAGKETVYI--------GDLPGLIGFGCRGSTALFEDNKSAINLSKRSGAHCRTKQIGVRWHGIREWVWGGILALKYVQTGNQLVDILTKGLSRVKFQRLR 684
Y G C P R + +RI +L+ G+ +G R++ L+ F D D+A D + +KSTTGYVF LNG AIS +KQ+ S+T AE+VA+ EAGKE V+I GD+P + LF DN+SAI + + H RTK I VR+H IRE G++ KYV T QL DILTK L+ +FQRLR
Sbjct: 8 YAVGQVAQHCQNPGRLHWKAVQRILSYLAGKRQHGLLYGPRNH---LKAFSDADYAGDSDSRKSTTGYVFLLNGAAISWSGKKQKCTAQSTTEAEFVASSEAGKEAVWILRGLKELEGDVPTPM--------ELFMDNQSAIRIIRNPELHQRTKHIDVRYHFIRELQEQGVIDAKYVNTNEQLADILTKPLAAPRFQRLR 197
BLAST of mRNA_H-paniculata_contig35540.9444.1 vs. uniprot
Match: A0A090C2V0_HYAAE (RxLR effector candidate protein (Fragment) n=3 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=A0A090C2V0_HYAAE) HSP 1 Score: 143 bits (360), Expect = 4.120e-38 Identity = 84/210 (40.00%), Postives = 121/210 (57.62%), Query Frame = 1
Query: 76 GGETDLLVAVYVDGMAIAGC-----HYPSREDFSTYKRIFRHLSTVPNLGITFGGRSNGHGLEGFVDTDWAEDVEDQKSTTGYVFKLNGGAIS*CSRKQQSVTWSSTLAEYVAAGEAGKETVYIGDLPGLIG-FGCRGSTALFEDNKSAINLSKRSGAHCRTKQIGVRWHGIREWVWGGILALKYVQTGNQLVDILTKGLSRVKFQRLRN 687
GG L+VA D A G P + KR+ R+L PN G+ F R G + G+ D DWA D+E ++ST+GYVF +NGG IS S+KQ++V SST AEY+A EA KE V++ G +G + +FEDN+ +I L+K H RTK I +R+H +RE V G + L+Y T + L D++TK ++ V+F+ LR+
Sbjct: 42 GGIMYLMVATRPDLAAAVGSLSQFSSDPCPTHWQALKRVLRYLQATPNHGLEFT-REEGSRICGYTDADWAGDIESRRSTSGYVFMMNGGCISWKSQKQRTVALSSTEAEYMALSEATKEAVWLKVFLGELGEMTSDEAIKMFEDNQGSIALAKNPEFHKRTKHIDIRYHFVREKVESGEVILEYCSTQDMLADMMTKPIAAVQFESLRD 250
BLAST of mRNA_H-paniculata_contig35540.9444.1 vs. uniprot
Match: A0A7D9JFU5_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9JFU5_PARCT) HSP 1 Score: 145 bits (367), Expect = 3.550e-37 Identity = 79/188 (42.02%), Postives = 115/188 (61.17%), Query Frame = 1
Query: 142 PSREDFSTYKRIFRHLSTVPNLGITF----GGRSNGHGLEGFVDTDWAEDVEDQKSTTGYVFKLNGGAIS*CSRKQQSVTWSSTLAEYVAAGEAGKETVYIGDLPGLIGFGCRGSTALFEDNKSAINLSKRSGAHCRTKQIGVRWHGIREWVWGGILALKYVQTGNQLVDILTKGLSRVKFQRLRNWL 693
PS+E ++ KR+ R++ N G+ F NG L G+ D +WA DV+ ++ST+GYVFK+ +S CS+KQ SVT S+T AEYVA +A +E +++ L IG T ++EDN+ AI +SK + H RTK I VR+H +RE V + + Y T + L DI+TKGL++ FQRLR+ L
Sbjct: 343 PSKEHWNGVKRLLRYIKGTLNFGLKFTTSENDDENGDELYGYSDANWAGDVDSRRSTSGYVFKVANSTVSWCSKKQASVTKSTTEAEYVALSQATQEAIWMRRLLSDIGCKSEEPTTMYEDNQGAIEISKNARFHNRTKHIDVRFHFVREKVLSNEVKVIYCPTEHMLADIMTKGLTKKIFQRLRSML 530
BLAST of mRNA_H-paniculata_contig35540.9444.1 vs. uniprot
Match: A0A7D9D5L2_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D5L2_PARCT) HSP 1 Score: 141 bits (355), Expect = 3.770e-37 Identity = 75/184 (40.76%), Postives = 108/184 (58.70%), Query Frame = 1
Query: 142 PSREDFSTYKRIFRHLSTVPNLGITFGGRSNGHGLEGFVDTDWAEDVEDQKSTTGYVFKLNGGAIS*CSRKQQSVTWSSTLAEYVAAGEAGKETVYIGDLPGLIGFGCRGSTALFEDNKSAINLSKRSGAHCRTKQIGVRWHGIREWVWGGILALKYVQTGNQLVDILTKGLSRVKFQRLRNWL 693
PS+E + KR+ R++ N G+ F G+S L G+ D DWA D++ ++ST+GYVF++NG +S CS++Q VT S+T AEYVA A +E V++ L IG + + EDN+ AI LSK H RTK I V +H +RE V + + Y T L D++TK L R FQ+ R+ L
Sbjct: 118 PSKEHWHGAKRVLRYIKDTVNYGLVFEGKSTKCSLIGYSDADWANDLDTRRSTSGYVFQINGSTVSWCSKRQPCVTRSTTEAEYVALSHATQEIVWLRRLLNDIGEKQDQPSIMNEDNQGAIELSKNPRFHNRTKHIDVAYHFVREKVGDKSINVNYCSTDKMLADVMTKSLPRQTFQKFRDML 301
BLAST of mRNA_H-paniculata_contig35540.9444.1 vs. uniprot
Match: A0A1Y1N3K4_PHOPY (Uncharacterized protein n=2 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1N3K4_PHOPY) HSP 1 Score: 139 bits (349), Expect = 7.590e-37 Identity = 79/176 (44.89%), Postives = 111/176 (63.07%), Query Frame = 1
Query: 157 FSTYKRIFRHLSTVPNLGITFGGRSNGHGLEGFVDTDWAEDVEDQKSTTGYVFKLNGGAIS*CSRKQQSVTWSSTLAEYVAAGEAGKETVYIGDLPGLIGFGCRGSTALFEDNKSAINLSKRSGAHCRTKQIGVRWHGIREWVWGGILALKYVQTGNQLVDILTKGLSRVKFQRLR 684
++ KRI R+L +LGI + + + GF D+D+A DV+ +KSTTGYVF + GAI+ CSR+QQ+ + S+T AEYVAA EA KE +++ L I + L+ DN+SAI L K H RTK I VR+H I+E G + ++YV++ +QL DILTK L VKF +LR
Sbjct: 74 WNAVKRIMRYLKHTKDLGIRY--TFSDEPVHGFSDSDYASDVDTRKSTTGYVFNMANGAITWCSRRQQTTSVSTTEAEYVAAAEATKEAIWLRHLLSEISGKSIENVQLYVDNQSAIKLVKNPIFHKRTKHIDVRYHFIKEKFQNGDIKIEYVRSEDQLADILTKPLVSVKFNKLR 247
BLAST of mRNA_H-paniculata_contig35540.9444.1 vs. uniprot
Match: A0A060SU91_PYCCI (Uncharacterized protein n=2 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SU91_PYCCI) HSP 1 Score: 139 bits (351), Expect = 8.340e-37 Identity = 91/218 (41.74%), Postives = 117/218 (53.67%), Query Frame = 1
Query: 76 GGETDLLVAVYVDGMAIAGCHYPSREDFSTYKRIFRHLSTVPNLGITFGGRSNG---HGLE--GFVDTDWAEDVEDQKSTTGYVFKLNGGAIS*CSRKQQSVTWSSTLAEYVAAGEAGKETVYIG------DLPGLIGFGCRGSTALF-EDNKSAINLSKRSGAHCRTKQIGVRWHGIREWVWGGILALKYVQTGNQLVDILTKGLSRVKFQRLRNWL 693
G D+ AV G P E ++ R+FR+L L +T+G HGL G+ D DWA D D++ST+ YVFKL GGAIS CSRKQQS+ SST AEYVA A KE +++ D P R L DN+SA+ L+K S H RTK I VR H IR+ + G L ++YV TG+Q+ D+LTK L+R K N L
Sbjct: 67 GSRPDIAFAV---GTLSKHASTPGTEHWNALMRVFRYLRGTSGLRLTYGKDLKPLCEHGLTVVGYSDADWAGDRNDRRSTSAYVFKLGGGAISWCSRKQQSIAQSSTEAEYVALALAAKEGLWLSTLLSDLDSPVFHALSSRLQVPLILVDNQSAMALAKNSSFHDRTKHIAVRHHFIRDELERGTLTVEYVPTGDQVADVLTKSLAREKHTYFTNLL 281
BLAST of mRNA_H-paniculata_contig35540.9444.1 vs. uniprot
Match: A0A7D9DPP1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9DPP1_PARCT) HSP 1 Score: 146 bits (368), Expect = 1.620e-36 Identity = 79/188 (42.02%), Postives = 115/188 (61.17%), Query Frame = 1
Query: 142 PSREDFSTYKRIFRHLSTVPNLGITF----GGRSNGHGLEGFVDTDWAEDVEDQKSTTGYVFKLNGGAIS*CSRKQQSVTWSSTLAEYVAAGEAGKETVYIGDLPGLIGFGCRGSTALFEDNKSAINLSKRSGAHCRTKQIGVRWHGIREWVWGGILALKYVQTGNQLVDILTKGLSRVKFQRLRNWL 693
PS+E ++ KR+ R++ N G+ F NG L G+ D +WA DV+ ++ST+GYVFK+ +S CS+KQ SVT S+T AEYVA +A +E +++ L IG T ++EDN+ AI +SK + H RTK I VR+H +RE V + + Y T + L DI+TKGL++ FQRLR+ L
Sbjct: 1088 PSKEHWNGVKRLLRYIKGTLNFGLKFTTSENDDENGDELYGYSDANWAGDVDSRRSTSGYVFKVANSTVSWCSKKQASVTKSTTEAEYVALSQATQEAIWMRGLLSDIGCKSEEPTTMYEDNQGAIEISKNARFHNRTKHIDVRFHFVREKVLSNEVKVIYCPTEHMLADIMTKGLTKKIFQRLRSML 1275
BLAST of mRNA_H-paniculata_contig35540.9444.1 vs. uniprot
Match: UPI001E1BA19B (secreted RxLR effector protein 161-like n=2 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BA19B) HSP 1 Score: 137 bits (345), Expect = 2.030e-36 Identity = 75/183 (40.98%), Postives = 109/183 (59.56%), Query Frame = 1
Query: 136 HYPSREDFSTYKRIFRHLSTVPNLGITFGGRSNGHGLEGFVDTDWAEDVEDQKSTTGYVFKLNGGAIS*CSRKQQSVTWSSTLAEYVAAGEAGKETVYIGDLPGLIGFGCRGSTALFEDNKSAINLSKRSGAHCRTKQIGVRWHGIREWVWGGILALKYVQTGNQLVDILTKGLSRVKFQRLR 684
H P + KRI +LS N G+ F G S+ L GF D D+A DVE ++STTGYVF L+GG ++ C ++Q+ + S+T +EY+AA E+ +E V++ L +G L DN+SA+ L + +H RTK I +++H IR+ GG + + YV T NQL DILTK L+ +F LR
Sbjct: 47 HNPGPAHWEGVKRILSYLSGTRNYGLCFSGSSSST-LTGFTDADYAGDVETRRSTTGYVFLLHGGPVAWCCKRQKCTSLSTTESEYIAACESTREAVWLKRLLIELGLQETNPIPLLCDNQSAVRLVRNPDSHQRTKHIDIKYHYIRDQQEGGEINISYVDTNNQLADILTKPLAAARFNWLR 228
BLAST of mRNA_H-paniculata_contig35540.9444.1 vs. uniprot
Match: M5BWJ0_THACB (Rhizoctonia solani AG1-IB WGS project CAOJ00000000 data, isolate 7/3/14, contig 10758 n=1 Tax=Thanatephorus cucumeris (strain AG1-IB / isolate 7/3/14) TaxID=1108050 RepID=M5BWJ0_THACB) HSP 1 Score: 144 bits (364), Expect = 4.010e-36 Identity = 78/189 (41.27%), Postives = 112/189 (59.26%), Query Frame = 1
Query: 106 YVDGMAIAGCHYPSREDFSTYKRIFRHLSTVPNLGITFGGRSNGHGLEGFVDTDWAEDVEDQKSTTGYVFKLNGGAIS*CSRKQQSVTWSSTLAEYVAAGEAGKETVYIGDLPGLIGFGCRGSTALFEDNKSAINLSKRSGAHCRTKQIGVRWHGIREWVWGGILALKYVQTGNQLVDILTKGLSRVKF 672
Y G+ P E + +R+ R+L NLGI F RS L GFVD D+A D +ST+G++FK+ GG+I+ SRKQ +++ SST AEYVAA A +E +++ +GF G T ++ DN+S++ LSK G H TK I V++H IRE + + LK++ T Q+ D+LTK L RVKF
Sbjct: 545 YATGLLAQHAANPGEEHWKALQRVLRYLRGSTNLGIIFD-RSRPSELVGFVDADYAGDPNTSRSTSGWIFKMTGGSIAWSSRKQPTISLSSTEAEYVAAASAARELIWVRGFLSELGFTQNGPTVVYTDNQSSMALSKNPGNHQNTKHIRVKYHFIREMIELKEIELKFIPTDEQIADMLTKPLGRVKF 732 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig35540.9444.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig35540.9444.1 >prot_H-paniculata_contig35540.9444.1 ID=prot_H-paniculata_contig35540.9444.1|Name=mRNA_H-paniculata_contig35540.9444.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=75bp MAIAGCHYPSREDFSTYKRIFRHLSTVPNLGITFGGRSNGHGLEGFVDTDback to top mRNA from alignment at H-paniculata_contig35540:289..1407+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig35540.9444.1 ID=mRNA_H-paniculata_contig35540.9444.1|Name=mRNA_H-paniculata_contig35540.9444.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1119bp|location=Sequence derived from alignment at H-paniculata_contig35540:289..1407+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig35540:289..1407+ >mRNA_H-paniculata_contig35540.9444.1 ID=mRNA_H-paniculata_contig35540.9444.1|Name=mRNA_H-paniculata_contig35540.9444.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=450bp|location=Sequence derived from alignment at H-paniculata_contig35540:289..1407+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |