mRNA_H-paniculata_contig3554.9443.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3554.9443.1 vs. uniprot
Match: D8LU73_ECTSI (Flagellar outer dynein arm light chain 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU73_ECTSI) HSP 1 Score: 247 bits (630), Expect = 1.290e-82 Identity = 119/132 (90.15%), Postives = 125/132 (94.70%), Query Frame = 1
Query: 1 MTEEPRRGPPVVEIVLPTYITKPGEDEKFYPSEVKAIAEKAVHAELKDKEYDGEEAKEWSLNITDAIREGVKTLNVPRYKIVVQVTIGQMKDQGLRVASRCLWDTATDNYASVEFKKQSLWCTAMIFGVYTE 396
M EEPRRGPPVVEIVLPTYITKP EDEKFYPSEVKA+AEKAV EL+DKEYDGEEAKEWSLNI D IREGVKTLNVPRYKIVVQVTIGQMKDQG+RVASRCLWDTATDNYASV+FK QSLWC+AM+FGVYTE
Sbjct: 1 MAEEPRRGPPVVEIVLPTYITKPSEDEKFYPSEVKAVAEKAVQVELQDKEYDGEEAKEWSLNIADTIREGVKTLNVPRYKIVVQVTIGQMKDQGVRVASRCLWDTATDNYASVQFKNQSLWCSAMVFGVYTE 132
BLAST of mRNA_H-paniculata_contig3554.9443.1 vs. uniprot
Match: A0A835ZA97_9STRA (Flagellar outer dynein arm light chain 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA97_9STRA) HSP 1 Score: 195 bits (496), Expect = 3.440e-62 Identity = 91/132 (68.94%), Postives = 109/132 (82.58%), Query Frame = 1
Query: 1 MTEEPRRGPPVVEIVLPTYITKPGEDEKFYPSEVKAIAEKAVHAELKDKEYDGEEAKEWSLNITDAIREGVKTLNVPRYKIVVQVTIGQMKDQGLRVASRCLWDTATDNYASVEFKKQSLWCTAMIFGVYTE 396
M E +G V+++VLPTY+ KP EDE FYP++ KA++EK V AEL KEYD +EAKEWSLNI DAIRE +K L++PRYK+VVQVT+GQMKDQG+RVASRCLWDTATDNYASV +K QSLWC M FG+YTE
Sbjct: 1 MEESQPKGRQVIDVVLPTYVMKPAEDEVFYPAKAKAMSEKIVKAELGGKEYDEQEAKEWSLNIADAIREQIKQLSIPRYKVVVQVTVGQMKDQGVRVASRCLWDTATDNYASVNYKTQSLWCNVMCFGIYTE 132
BLAST of mRNA_H-paniculata_contig3554.9443.1 vs. uniprot
Match: A0A7S2V6C1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6C1_9STRA) HSP 1 Score: 184 bits (467), Expect = 9.290e-58 Identity = 87/133 (65.41%), Postives = 106/133 (79.70%), Query Frame = 1
Query: 1 MTEEPRRGPPVVEIVLPTYITKPGEDEKFYPSEVKAIAEKAVHAELKDKEYDGEEAKEWSLNITDAIREGVKT-LNVPRYKIVVQVTIGQMKDQGLRVASRCLWDTATDNYASVEFKKQSLWCTAMIFGVYTE 396
M EEP G P+VE+VLPTYI P EDEKFY S+VKAIAE+ + EL+ KEY+ EAK WS+ I D +RE VK N+PRYK+VVQV++GQMKDQG+RVASRCLWDT TDNYASV +K +LWC+ M+FG+YTE
Sbjct: 1 MNEEPMPGQPIVEVVLPTYIMNPAEDEKFYQSQVKAIAERILKEELEGKEYEENEAKLWSITICDRVREHVKEECNIPRYKVVVQVSLGQMKDQGVRVASRCLWDTNTDNYASVSYKNHTLWCSCMVFGIYTE 133
BLAST of mRNA_H-paniculata_contig3554.9443.1 vs. uniprot
Match: A0A7S3JVI1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JVI1_9STRA) HSP 1 Score: 169 bits (429), Expect = 6.650e-52 Identity = 78/128 (60.94%), Postives = 97/128 (75.78%), Query Frame = 1
Query: 13 PRRGPPVVEIVLPTYITKPGEDEKFYPSEVKAIAEKAVHAELKDKEYDGEEAKEWSLNITDAIREGVKTLNVPRYKIVVQVTIGQMKDQGLRVASRCLWDTATDNYASVEFKKQSLWCTAMIFGVYTE 396
PR G V+E++LPTY KPGEDEKFYPS+ KAI E + L +EYD E AKEW NI + I++ VKTLN+PRYK++ Q+TIGQ++DQG+ +ASRCLWD A DNYASV F SLW AM+FGVYT+
Sbjct: 11 PRPGQRVIEVILPTYAMKPGEDEKFYPSKAKAICEDILRTTLAGQEYDEELAKEWVTNIGNDIKDKVKTLNIPRYKVICQITIGQVRDQGVSIASRCLWDVAHDNYASVNFSNDSLWANAMVFGVYTD 138
BLAST of mRNA_H-paniculata_contig3554.9443.1 vs. uniprot
Match: A0A6U3X956_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3X956_9STRA) HSP 1 Score: 166 bits (419), Expect = 3.330e-50 Identity = 80/129 (62.02%), Postives = 102/129 (79.07%), Query Frame = 1
Query: 13 PRRGPPVVEIVLPTYITKPGEDEKFYPSEVKAIAEKAVHAELKDKEYDGEEAKEWSLNITDAIREGVKT-LNVPRYKIVVQVTIGQMKDQGLRVASRCLWDTATDNYASVEFKKQSLWCTAMIFGVYTE 396
PR G PVV++VLPTYI KP E+E FYPSE+K IAE V +EL K YD +++KE ++ I I+E +K N+PRYKIV+QVTIG+MK+QG+RVASRCLWD TDNYASV++ Q LWCTAM+FG++TE
Sbjct: 23 PRAGQPVVDVVLPTYIMKPAENEIFYPSEIKKIAEAVVKSELDGKLYDEDDSKESNVLICGKIKERIKEKCNLPRYKIVIQVTIGEMKNQGVRVASRCLWDNITDNYASVQYTNQHLWCTAMVFGIFTE 151
BLAST of mRNA_H-paniculata_contig3554.9443.1 vs. uniprot
Match: A0A7S2FB08_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FB08_9STRA) HSP 1 Score: 165 bits (417), Expect = 5.910e-50 Identity = 83/130 (63.85%), Postives = 99/130 (76.15%), Query Frame = 1
Query: 13 PRRGPPVVEIVLPTYITKPGEDEKFYPSEVKAIAEKAVHAELKDKEYDGEE-AKEWSLNITDAIREGVKT-LNVPRYKIVVQVTIGQMKDQGLRVASRCLWDTATDNYASVEFKKQSLWCTAMIFGVYTE 396
PR G ++E+VLPTYI KP E E FYPS VK IA + EL K YD EE AK+W+ I + I+ VK ++PRYKI+VQVT+GQMKDQG+RVASRCLWDTATDNYASVE+ Q LWC+AM+FGVYTE
Sbjct: 18 PRPGQSIIEVVLPTYIMKPEETEIFYPSHVKRIAGAILEEELAGKMYDDEEEAKKWNTTICEKIKAQVKAECDIPRYKIIVQVTLGQMKDQGVRVASRCLWDTATDNYASVEYANQHLWCSAMVFGVYTE 147
BLAST of mRNA_H-paniculata_contig3554.9443.1 vs. uniprot
Match: F0YJJ5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJJ5_AURAN) HSP 1 Score: 157 bits (397), Expect = 4.200e-47 Identity = 73/128 (57.03%), Postives = 94/128 (73.44%), Query Frame = 1
Query: 13 PRRGPPVVEIVLPTYITKPGEDEKFYPSEVKAIAEKAVHAELKDKEYDGEEAKEWSLNITDAIREGVKTLNVPRYKIVVQVTIGQMKDQGLRVASRCLWDTATDNYASVEFKKQSLWCTAMIFGVYTE 396
PR G V+E+VLPTY P E EKFYPSE K I E+ + +L++ YD E AKEW L I + I+ +K+LN+PRYK+VVQVTIGQMKDQG+ VASRCLWD + DNYASV + ++LW M+F +YT+
Sbjct: 6 PRPGQQVIEVVLPTYSMNPTEVEKFYPSEAKQICERVLTGQLENATYDDESAKEWILLIGNTIKSEIKSLNIPRYKVVVQVTIGQMKDQGVSVASRCLWDISNDNYASVNYTNETLWANVMVFVIYTD 133
BLAST of mRNA_H-paniculata_contig3554.9443.1 vs. uniprot
Match: F0YN77_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YN77_AURAN) HSP 1 Score: 157 bits (397), Expect = 4.340e-47 Identity = 75/130 (57.69%), Postives = 92/130 (70.77%), Query Frame = 1
Query: 7 EEPRRGPPVVEIVLPTYITKPGEDEKFYPSEVKAIAEKAVHAELKDKEYDGEEAKEWSLNITDAIREGVKTLNVPRYKIVVQVTIGQMKDQGLRVASRCLWDTATDNYASVEFKKQSLWCTAMIFGVYTE 396
E PR G V+E+VLPTY P E E+FYPSE K I E+ + EL +KEY + AK+W ++I + I+ +K L VPRYKI+VQVTIGQMKDQG+ VASRCLWD DNY SV F SLW M+FGVYT+
Sbjct: 5 EGPRPGQQVIEVVLPTYSMIPAEQERFYPSEAKRICERVLVGELDNKEYFEDSAKDWIISIGNTIKSEIKCLTVPRYKIIVQVTIGQMKDQGVSVASRCLWDITFDNYTSVNFTNSSLWANVMVFGVYTD 134
BLAST of mRNA_H-paniculata_contig3554.9443.1 vs. uniprot
Match: A0A6S8SDH5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8SDH5_9STRA) HSP 1 Score: 156 bits (395), Expect = 8.210e-47 Identity = 74/132 (56.06%), Postives = 96/132 (72.73%), Query Frame = 1
Query: 1 MTEEPRRGPPVVEIVLPTYITKPGEDEKFYPSEVKAIAEKAVHAELKDKEYDGEEAKEWSLNITDAIREGVKTLNVPRYKIVVQVTIGQMKDQGLRVASRCLWDTATDNYASVEFKKQSLWCTAMIFGVYTE 396
M + R G V+EI+LPTY KP EDEKFYPS+++ I +A+ EL +KEY + AK+W L I + I+ K+LN+PRYK++VQVTIGQMKDQG+ VASRCLWD DNY SV + SLW AM+FG+YT+
Sbjct: 1 MQDGARPGQQVIEIILPTYSMKPAEDEKFYPSKIRQICTEALKDELDNKEYFEDGAKDWILTIGNKIKAQAKSLNLPRYKVIVQVTIGQMKDQGVSVASRCLWDLLFDNYTSVNYTNSSLWANAMVFGLYTD 132
BLAST of mRNA_H-paniculata_contig3554.9443.1 vs. uniprot
Match: A0A7R9YER0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YER0_9STRA) HSP 1 Score: 147 bits (370), Expect = 5.370e-43 Identity = 72/126 (57.14%), Postives = 95/126 (75.40%), Query Frame = 1
Query: 22 GPPVVEIVLPTYITKPGEDEKFYPSEVKAIAEKAVHAELKDKEYDGEEAKEWSLNITDAIREGVKT-LNVPRYKIVVQVTIGQMKDQGLRVASRCLWDTATDNYASVEFKKQSLWCTAMIFGVYTE 396
GP + PTYI KP EDE+FYPS+V+ IA++ + AEL+ K Y+ EE+K+ SL + + I+E VK N+PRYKIVVQVTIG+M+DQG+RVASRCLWDT+TDNY S + SLW A++FG YT+
Sbjct: 8 GPREIIDYKPTYILKPEEDERFYPSQVQKIAKEVLLAELEGKTYNEEESKDLSLGLCELIKERVKEGTNIPRYKIVVQVTIGEMRDQGVRVASRCLWDTSTDNYTSATYTNTSLWAVAIVFGCYTD 133 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3554.9443.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3554.9443.1 >prot_H-paniculata_contig3554.9443.1 ID=prot_H-paniculata_contig3554.9443.1|Name=mRNA_H-paniculata_contig3554.9443.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=133bp MTEEPRRGPPVVEIVLPTYITKPGEDEKFYPSEVKAIAEKAVHAELKDKEback to top mRNA from alignment at H-paniculata_contig3554:10751..11562+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3554.9443.1 ID=mRNA_H-paniculata_contig3554.9443.1|Name=mRNA_H-paniculata_contig3554.9443.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=812bp|location=Sequence derived from alignment at H-paniculata_contig3554:10751..11562+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3554:10751..11562+ >mRNA_H-paniculata_contig3554.9443.1 ID=mRNA_H-paniculata_contig3554.9443.1|Name=mRNA_H-paniculata_contig3554.9443.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=798bp|location=Sequence derived from alignment at H-paniculata_contig3554:10751..11562+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |