mRNA_H-paniculata_contig3550.9437.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3550.9437.1 vs. uniprot
Match: D7G0U0_ECTSI (Beta-hydroxylase, aspartyl/asparaginyl family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0U0_ECTSI) HSP 1 Score: 318 bits (814), Expect = 1.610e-101 Identity = 179/387 (46.25%), Postives = 211/387 (54.52%), Query Frame = 3
Query: 6 LRTELG---HRGLDRSRVWDFVRHNRDGMPPPPSPPPSCIPTGLYFPGLEARPWWD-RSKFPWIEQLEAATPEITSEMVALLHASGGSGYAAGTGEMSSVYDATKGWGTMRIRYMGRYDQLGVNYELLPRTLSVLDKLPLAPETAAFQRQLPGTGLPLHVDPSNFVLGLHLGIVVPPGGSAESRSIQASLGETDRAIVGEMKNTGTGGVGFGSRDGITKTKRVKKGRTERANNSHGAARKRFGEQAASPAPLDDVAVRLVSAQRGQSEYQNSGTLVDDFRNNVGLLGKELSGEQTDLSGGDRGAADGDR--ERAWIEVAGTKREWDTGEAFVFDPSFLHRTHNPTSQERVILNVDIWHPGLADVEIRAIEKVCELIEQWNARIGIFQ 1148
LR+ELG ++ D SRVW FV HNR+G PP P PS TGLYFPGLEA+PWWD RS+ W++ LE A P+I EM AL + G Y GTGEMS+VYDAT+GWGTMRIRYMGR+ Q GVNY LLPRTL+ L +LPLAPETAAFQRQL GTGLPLHVDPSNFVLG H+G+VVP G + E+ +G D G +R ERAWIEV+G KR W+ G AFVFDPSFLHRT+NPT ERVILN+D+WHPGL +VE AI +VCEL+EQWN+R G+F+
Sbjct: 86 LRSELGAGENQPEDLSRVWGFVAHNREGKAPPAEPSPSYRATGLYFPGLEAKPWWDDRSECSWLQDLEDAAPDIKREMEALQRSGGARSYKGGTGEMSTVYDATRGWGTMRIRYMGRFGQPGVNYSLLPRTLAALRRLPLAPETAAFQRQLAGTGLPLHVDPSNFVLGCHVGVVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGSTAEXXXAERRSGTGRDGGTERRERSGERAWIEVSGEKRHWEPGRAFVFDPSFLHRTYNPTDGERVILNIDVWHPGLKEVEKTAIRRVCELVEQWNSRSGLFE 429
BLAST of mRNA_H-paniculata_contig3550.9437.1 vs. uniprot
Match: A0A7S3AKA7_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AKA7_9EUKA) HSP 1 Score: 79.0 bits (193), Expect = 8.050e-14 Identity = 34/64 (53.12%), Postives = 46/64 (71.88%), Query Frame = 3
Query: 930 WIEVAGTKREWDTGEAFVFDPSFLHRTHNPTSQERVILNVDIWHPGLADVEIRAIEKVCELIEQ 1121
+I VAGTK WD G +FDPS+ H T NPTSQ+RVILN+D++HP L+ +E AI+ +L +Q
Sbjct: 78 YISVAGTKYHWDDGSVMLFDPSYRHETFNPTSQDRVILNIDVFHPELSALECEAIQLTIDLKKQ 141
BLAST of mRNA_H-paniculata_contig3550.9437.1 vs. uniprot
Match: A0A7S3WKR7_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3WKR7_9SPIT) HSP 1 Score: 76.3 bits (186), Expect = 1.210e-12 Identity = 35/64 (54.69%), Postives = 42/64 (65.62%), Query Frame = 3
Query: 921 ERAWIEVAGTKREWDTGEAFVFDPSFLHRTHNPTSQERVILNVDIWHPGLADVEIRAIEKVCEL 1112
E +I VAG K W GE VFDPSF H T NPTSQ+R+ILN+DI+HP L D+E I + L
Sbjct: 98 ETPYIWVAGDKYHWRDGEVMVFDPSFKHETFNPTSQDRIILNIDIFHPELTDLECDVIRETIRL 161
BLAST of mRNA_H-paniculata_contig3550.9437.1 vs. uniprot
Match: A0A813EAI7_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813EAI7_POLGL) HSP 1 Score: 79.3 bits (194), Expect = 1.230e-12 Identity = 32/66 (48.48%), Postives = 43/66 (65.15%), Query Frame = 3
Query: 930 WIEVAGTKREWDTGEAFVFDPSFLHRTHNPTSQERVILNVDIWHPGLADVEIRAIEKVCELIEQWN 1127
WIE G +R W GEA VFD SF+H T NPTS++RV+L +D+WH L+ E A+ + I+ WN
Sbjct: 248 WIECGGVRRHWAEGEAMVFDQSFVHSTFNPTSEDRVVLAIDLWHHDLSMAERAALSTFFDFIDSWN 313
BLAST of mRNA_H-paniculata_contig3550.9437.1 vs. uniprot
Match: A0A7S3ZCI2_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZCI2_9EUKA) HSP 1 Score: 76.3 bits (186), Expect = 3.220e-12 Identity = 50/136 (36.76%), Postives = 72/136 (52.94%), Query Frame = 3
Query: 129 YFPGLEA-RPWWDRSKFPWIEQLEAATPEITSEMVALLHASGGSGYAAGTGEMSSVYDAT--KGWGTMRIRYMGRYDQLGVNYELLPRTLSVLDKLPLAPETAAFQRQLPGTGLPLHVDPSNFVLGLHLGIVVPPG 527
Y PG+ A P+ D S+F +I+++E EI SE AL+ A+ T + SV GW T+ + Y G G Y L P T +L+K+P+A A F RQ PG+G+P+H D +N L +G+ VP G
Sbjct: 21 YLPGIPAPSPFRDPSEFAFIKEIEQNIDEIRSEFEALVDAN------VTTAQFRSVTSMNYKNGWKTLPLYYNGNTIP-GFPYHLCPVTAGILEKVPVAGRIAGFNRQQPGSGIPMHTDGNNMWLTCQVGVSVPDG 149
BLAST of mRNA_H-paniculata_contig3550.9437.1 vs. uniprot
Match: A0A813DQA1_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DQA1_POLGL) HSP 1 Score: 78.6 bits (192), Expect = 5.500e-12 Identity = 32/66 (48.48%), Postives = 43/66 (65.15%), Query Frame = 3
Query: 930 WIEVAGTKREWDTGEAFVFDPSFLHRTHNPTSQERVILNVDIWHPGLADVEIRAIEKVCELIEQWN 1127
WIE G +R W GEA VFD SF+H T NPTS++RV+L +D+WH L+ E A+ + I+ WN
Sbjct: 445 WIECGGVRRHWAEGEAMVFDQSFVHSTFNPTSEDRVVLAIDLWHHDLSMEERAALSTFFDFIDSWN 510
BLAST of mRNA_H-paniculata_contig3550.9437.1 vs. uniprot
Match: R1CWD3_EMIHU (Asp_Arg_Hydrox domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CWD3_EMIHU) HSP 1 Score: 75.9 bits (185), Expect = 6.070e-12 Identity = 33/56 (58.93%), Postives = 40/56 (71.43%), Query Frame = 3
Query: 921 ERAWIEVAGTKREWDTGEAFVFDPSFLHRTHNPTSQERVILNVDIWHPGLADVEIR 1088
E +I VAG K W GE VFDPSF H T NPTSQ+R+ILN+D++HP L D+E R
Sbjct: 156 ETPYISVAGEKYHWREGEVMVFDPSFKHETFNPTSQDRIILNIDLFHPELTDLECR 211
BLAST of mRNA_H-paniculata_contig3550.9437.1 vs. uniprot
Match: A0A7S0JKX7_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JKX7_9EUKA) HSP 1 Score: 76.3 bits (186), Expect = 9.810e-12 Identity = 33/61 (54.10%), Postives = 42/61 (68.85%), Query Frame = 3
Query: 930 WIEVAGTKREWDTGEAFVFDPSFLHRTHNPTSQERVILNVDIWHPGLADVEIRAIEKVCEL 1112
+I VAG+K W G +FDPSF H T NPTSQER+ILN+D++HP L D+E AI+ L
Sbjct: 231 YIAVAGSKYHWRDGNVMLFDPSFRHETFNPTSQERIILNIDVFHPELTDLECEAIQLTIAL 291
BLAST of mRNA_H-paniculata_contig3550.9437.1 vs. uniprot
Match: A0A838L046_9SPHN (Aspartyl/asparaginyl beta-hydroxylase domain-containing protein n=2 Tax=Sphingomonas chungangi TaxID=2683589 RepID=A0A838L046_9SPHN) HSP 1 Score: 70.1 bits (170), Expect = 1.920e-9 Identity = 30/60 (50.00%), Postives = 36/60 (60.00%), Query Frame = 3
Query: 930 WIEVAGTKREWDTGEAFVFDPSFLHRTHNPTSQERVILNVDIWHPGLADVEIRAIEKVCE 1109
W V REW G+AFVFD + H NPT Q RV+L VD+WHPGL E A++ V E
Sbjct: 317 WFRVGAETREWHVGQAFVFDDTIEHEACNPTDQLRVVLIVDVWHPGLRSGERHAVQSVME 376
BLAST of mRNA_H-paniculata_contig3550.9437.1 vs. uniprot
Match: UPI0012FEF211 (aspartyl/asparaginyl beta-hydroxylase domain-containing protein n=1 Tax=Streptomyces rubellomurinus (strain ATCC 31215) TaxID=359131 RepID=UPI0012FEF211) HSP 1 Score: 67.8 bits (164), Expect = 3.900e-9 Identity = 50/170 (29.41%), Postives = 73/170 (42.94%), Query Frame = 3
Query: 18 LGHRGLDRSRVWDFVRHNRDGMPPPPSPPPSCIPTGLYFPGLEARPWWDRSKFPWIEQLEAATPEITSEMVALLHASGGSGYAAGTGEMSSVYDATKGWGTMRIRYMGRYDQLGVNYELLPRTLSVLDKLPLAPETAA--FQRQLPGTGLPLHVDPSNFVLGLHLGIVVP 521
+ DRS++ +G PS + PGLEA PWWD+++FPWI LE A P++ E + A+G + S + W +G+ +Q N + PRT +VL +P A F PGT + H N + HLG+VVP
Sbjct: 16 INRTNADRSQLTRIFNGMDEGESRTPSTEAGPQRPEILCPGLEASPWWDKNRFPWIAGLEKAYPDVRGEFLKAWGAAGPNANGIMRHPNSHNLARSGRWSAYYFHLLGQVNQR--NMDSCPRTSAVLSGIPGADSAGMSYFSVMDPGTHVAPHCGFINVRVRCHLGLVVP 183 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3550.9437.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3550.9437.1 >prot_H-paniculata_contig3550.9437.1 ID=prot_H-paniculata_contig3550.9437.1|Name=mRNA_H-paniculata_contig3550.9437.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=357bp MPPPPSPPPSCIPTGLYFPGLEARPWWDRSKFPWIEQLEAATPEITSEMVback to top mRNA from alignment at H-paniculata_contig3550:2326..5403+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3550.9437.1 ID=mRNA_H-paniculata_contig3550.9437.1|Name=mRNA_H-paniculata_contig3550.9437.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3078bp|location=Sequence derived from alignment at H-paniculata_contig3550:2326..5403+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3550:2326..5403+ >mRNA_H-paniculata_contig3550.9437.1 ID=mRNA_H-paniculata_contig3550.9437.1|Name=mRNA_H-paniculata_contig3550.9437.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2142bp|location=Sequence derived from alignment at H-paniculata_contig3550:2326..5403+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |