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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 854 |
| Cds size | 492 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3520.9372.1 >prot_H-paniculata_contig3520.9372.1 ID=prot_H-paniculata_contig3520.9372.1|Name=mRNA_H-paniculata_contig3520.9372.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=164bp
MSPAPTDVSYHRSTNVMESSQNVATTAQASGVAKDQHGAAIGGGEGRASC
ADAGQGAAAVSAEAAGGAGPGNMPSGISVQELKQMTALRMAHAQGHVRVV
SPFQPYGGNGAGEESSRGSSPTRGNGEDSSSNNPSRSSTPTISIHTTAAA
PTAPTATATAAGGG back to topmRNA from alignment at H-paniculata_contig3520:2022..9155- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig3520.9372.1 ID=mRNA_H-paniculata_contig3520.9372.1|Name=mRNA_H-paniculata_contig3520.9372.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7134bp|location=Sequence derived from alignment at H-paniculata_contig3520:2022..9155- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCCTCGAGTAAAAGTCAAGGCATCAAATATATACATCATACATTACATTA
CAGACGGTACAGAGTGTACAGCAATCGTGGAGTGTGGCACGCTAAGGGCA
CTTTATCTGCGACAACAGCACATAGGACGCGGCAGCCGATGGGCCTTCAT
TTCCCTTCCCACGCGTGATTGGCAAGAAACACCGAGAAAACGTTCAAATT
CCTCAATTTTTTCCCGCTGAGGGTAACTCTGGCTTGGCTCTGGGGGTATA
AACATTTGCTGGAACCGCCAGGGCGTCAGAGTTTGGTTTGGTGTGTGCCA
AATACAAGAGGCAGGCCCCTCAGCACAGCACTAGGTAGGTTATGCATCAA
GCATTGGGTGGGCGGCGCTTGCGCCAACTGTCGGGGTGTCCGAAGCAGAG
CAGCAGATCGTTTTCTCGATTGACTTCGGCAAATACAGCTGCGCTTTTCT
TTCTTCCATTCCAATGATTAGCCTTATTAATGTGGTAAATTGCACCGTGA
TCATTCAGTTCGCGTGCGTGTTGGCAAGTAAAGTCAGTGGCACGGTGCGC
CCTCGGTCAACACAGCCTGGGGTGGTGTTGTAGGCGAAGAGCAGACCTCT
GCTGCTTGCAGGTACGTCGTTCTTTGTTCGAACATGCGTGCTTGTAAATC
TCGAACGGCCCCCGCTCACCCCCGACACTAATCACATGAGTCGCTCTCTT
TTTATTTTGCCTCTCAATAAAGTTGCCTGTAATTATTTGACCTGCTGCTG
CCGCTGCTACACACAGCAGGACGACGAACGAACTTTTCCAGCGTGTGATG
TCGCCAGCGCCCACAGATGTCAGTTATCATCGCAGCACCAATGTGATGGA
ATCATCGCAAAATGTAGCCACGACGGCCCAGGCTTCGGGGGTTGCCAAAG
ACCAGCATGGCGCCGCTATTGGAGGTGGAGAGGGGCGTGCGTCCTGCGCG
GATGCGGGTCAGGGCGCTGCGGCGGTATCTGCGGAAGCGGCTGGAGGGGC
AGGACCGGGCAACATGCCCAGCGGAATCAGCGTACAGGAATTGAAGCAGA
TGACTGCTTTGAGGATGGCTCATGCTCAGGGGCATGTACGGGTGGTCAGC
CCGTTCCAACCTTATGGTGAGCGTTGAGCTGTTGGCGATATTATAATGTT
GAGTTGTGTGTAGATTCAGGTCAACTTGTTGCGGAATTGTTTTGCAGCTT
CGGTGTGCTTTTCGTTAGTATTCTCTCATCATCTTCCAGGTGTCTGAATT
TTGGACACGCTGTTTCTGAGTACTATGTATGAAAAAATAAAACGAGCCGT
AAACTTTGTGTCACCAGGCAGAGAGTGGGAAGATCACGTGATGGATTGAA
CCGCAGTTGATTTCGTCCCCCCCCAACACGCTATGCAGTCAGTCGGCCAA
CACGTGAGACCTCGTTTCCAACTGGTTTTACCGCTATGTTTTCGATGCAC
GTGTGTATGTTGAAGAAGTGATGCCGTTCCGATGTCCACCGAGTAGAAGC
CCTCTCTCGGGATGATCACTGGCCTAGTTGATTGCCACTGATCTGTATAA
TCAAGACAAGTAATATAATGAACATTTGAGCAATTATAGACTGGGGTAGC
ATTGGAGGCGACTAAGACGAAGGGCAGAACAGATCAAGGGCGGAAGGGAT
CACATGCGCCCTCAGTTAGGCGACTACGCCAGTAAGCTGCTCCCTGTCAA
GGAGGGTCCTTTACGTGCGACCCGAATGACGGCACCTTCGTTGATCAAAT
CCGCTTGTGCAGTCTTCTATGATCAACGACACAAGTGTATGTTTCTGCAC
ATCTGAGTTTTCCGTCTACAGTCCTCTTCTCTGTAAGCCTGTTGACCGGA
CTTTGTACTCTTGGTTTTGCAGACCCTCCAACGATCAGACTTTTTGTTGT
AGGGCGCTGCGACGCTTGTCAAGCGCCCGAGCTGTTCCTCGCATGGGGGT
CGAGAGAGAGAGGGCGATTCTTGACAAAATTGAGATGTTGTGAAAACGGG
TACCCTAAGACAAATACTGAAGACAACAGACAAGAATCAAACCGAGGGAA
CATCCCTTACAACAGTACTCACAGACAGTATGGTCACATTATCCAACATT
TCCGATATTTTTATGAAGTAATTAGTCGGCATGTAGATAGGACAACATAC
TACATATTGAATATATCTGAGGCAGTGCTTTCATCTTGCAATGGTTGTTT
TTCGCCTGTTGGATTATGAGGGAGGTGCGTACGCTGCACGGGGGTCCTCT
GTTGGCGTAATTCTCACATGTTCACTAGCTTGTTGGCAGACCTCCTTGTC
ATTCTTGGTGTTTCACGTCTGCTGATCAACAGGTGCAGCCATCCTCGCCC
CATCCTCACCTCGCTTTTCCCATTTTACTATCCGCGGTATACGTACCAAT
CGTCTGTTGCAACAACAGACGGACGGCGACTGCCACATTCCGTACAGGCC
GGTAGCATTTAAAGTAGTCATTGAATCATGGCGCCGACAGGCACGCTTTC
CTTCCTATAGCTCTCTCGGAGCTGGTCAGAGTCGATGATGGACACAAACA
AGGTAGACAAAACTACCAGCCTACTAGCATATGTTTTTACAGCACACACA
GTACATCCCATCTCTAAATACAAGTTTGGTGATGAATATACCGAAGTCAG
GAATAAAGAAGTACCGACAGACGGTGCTATCAACATTTTCGTATAGAGGG
GTGTGTTCTTCTTGGGAGTCTTAAACCTGTCGTGGCACTACAAATCGTGC
TTGATACAGTGAACGGCACTGCACATCCGTCCCGACAGGTGGTGCACACG
CACACACGCAATACATATGCCGCCCTTGAGAGGAGGGCAGAAAGGTAGTG
ATTTTATTCAAGCACGGTCCGCCCCCTCCAAAATACTGTAGTAACTCTAC
AGCCGGCGCACCAACCTCTGCCTCACCATGTTCGGTACACATCTTGAAAC
GACGCATCTTATTGTCGGCGGGTTTTCTCGGGTAAATCTATGGTTGATGT
TGGAGTTGGCCAGCAGCTTCACGACCAGTAACAAGTACACACACTAGAGT
ATTTATCAAAGGGTTTGTTCACTCGATACCCGAGGAATTGGGAGTATTTT
TATTTTGTAGGCGTAGAAGAGGCCATACAGTAGCTTTGACACGAAAATAT
CTATCTTCCTCCATCCTCGATTGAAAGTCGGGTTGTGGCATGTCGCATCC
CGCCTACAAAAGAATCAAAGCGTTGAGTGGGCTGCGGGAAACGGGGAAGA
GTATTCCCAACCGAACCGAATGCCCCGCGGTACGAAATATTGACGATGGG
GAAACAGGGCTTGATGAACATCGATCGTTCAAGATGACCTGAGTAGAATT
GAAAGGCGAGCAGCCAGAGCTCTAAACCGATTATTTATGTCGAGCATGAA
TGAAGCATGAGCACCGATCGCGTAATCGTCCGTTGTATTATTTTTAATGA
AATTGTCGGTAACAAATGTGGACACCAATCAAATGCGGGGAGAGCCGAAG
GTTGATAGTACTGTGCTTGTTTCTGGTTGTGTCGTTCAGCACGTTTTTTG
TATGGGTTTGGTCGCGCTGTGTTGCCAATCATACCATATATGCCGTACTT
TCTTGTGTTATGATGGGTGACTGTTCTACCCATGATGGTGCATGTCGGGT
TAAACGTGTGTCGTCTCCTAAATCATGGAACAAGTCAATGATGAGGCAGC
TTCTTCGTCGTTGTCGTGCCATAAAAAGTATATCCAATCAATGTGTTGGA
GACGTACGAGCTCTCTGGAATCATACATCATTGTTTCAATATCGAAGCGA
GCTCTTGGGTGTGATGTGGTGTCTTGGCAGCGGGACTGAGAGAGCAATCG
ATATCCACAATTGCCTTCCACCATCTTATCCATCTTCCCTCTCCTATTTG
TCCCCGAAAACATGAAGCTCATCCTCATCACCTCACACCCTTGCTCGCTC
TGTGCGGTTGAAATTTCGCTACTGTAATGCCGCCCCGCGTCACTGGTATC
TTGAGGCTGAGCCAGGGCAGAGTTGTGCACATGGGGACGTGGTTGAACAT
TATGCTGATGAATACTGAAATTGTTCCTCCTGTAACATCTAATATTTGAC
AGTTCGCAATCAGTGACTCACTGTTCTTCACGTGGTGTCAACGGTCATGA
CTTTCTTCAACAGTCGATGTTTCTCGATTACTACGCCGTTCGATCTACCC
GAAATCGTGTTGCCGCCTGGCAGATGTCGTCTATTTTCTATTTCTATATT
CAGGGAAGTTGTTCGATGGCAGTAGTATAAGGAGTCCTGGGGGCTTGTGT
TTTTGCTATCCTATCCTACGTATCCTGCATGTATCTTCAGACAAAAAAAA
TATCGAGTTTTGAATCACTCTTTTGGGCTCAAATGCTGTTTCGGAACCAA
AAAGTTAAATCTGATGAGAAAAATGCCGAGCACTAACGTGGCTTTGTCTA
TAGAAGCATGCCTATACTAGCTGCATGCAATGCATTTACTGCAATGTCTG
TCTCTGAACAGGGGCTGCCCCCCCCCATGGCCGTGATGATTGGATAGTGC
ACGCACCGCTTTCACCTGTTTTGCATTTGGGAGATTATTTGAATGACAAG
GGGCGCTAAGAGGTTTCTCATTACTGGAGGTGAATATATGTACTGGTGCA
TATGAATAGTTCAGTTGGTGCAAGCAAGTTCAATACCTTCCATTGTAGAT
CAGTCAGAGCTGTCAAGATACGAGGGGTACCTATCGCACGTGGCGGGCGT
ATCTTGTGTGTGTGTGTGCGTGTGTGCGAAACAAGGTAGAGGTATACTCG
GCATCCTAAAGTTGCTGGATTACTTATCCACGAACTCAACACATTGGGGA
GGTGTTATCCATCGTGATGCGTGGGCAATTTGATGTGTTGATAAATACAC
AGGAAGGTGGCCCGCTCCCTTCCTCCTTGCTGTGATGCCACGTTCAATCA
CAGGTAGGTCACCCCCGCGTGATGCCATTTTTAAGATCGATTTAAAAGGA
GCCTCCGGGGATGTGGCACCGAAAAATGCGTCGTTAGAAATGTCACGTCT
AGATTTGTGATGGAAGTGTTGTTTCGATATAGCGCAATAAAGGGTATCTC
GTATTTCCTTTCTCAAGGAAATCGAGACCTGATTAAGAAAATTCATATGG
CGGAGTGATGAGGCCTTCATAAAGAAATACATGATGTTGGGCAATTTATG
GTGGAAAGTTTACAATGCATGACAAAAAGCCCGAGCGGGGGGGTATTCCA
TTCCGCACACAGGAAATGCCCAGAACAGAGGGAAGAGATACATGACACTG
TGGTGATAAAGTTAAGGCAAGGACAAGGACTTGCGGTTCGAATGTGGAGA
GTAAAAACGCACGTGTCTTGTCTAGTTGTCGACATCGCGTTGCCTATGGG
TGATATGGCGGATTTCATGACTTCGCTGTCAGTGTTGTGCTGTCCTCGGG
CGAATCTCGTCCGCCGCTCCATCTGGTGTCGTGGGTTGTCATTTGTCTTT
CCTATGAACTAAATCCCTCATTTCCTGCCTCGAATATTTTCACACATCGA
GCACCCGCGGGCGTGTATGCGCTTCTTGCTGTTTTTTTCCCCCACGCAAC
CACTTCGGAGCTCCAGTCAACCAACTCGAGCAAGTCTTGTGTTTCTGTAG
TTTGGCTCGGCATATTTCCCCGTTATATCCCTTTATATTTTTCAACCCTG
CCGATACCAGTCCATCCTTTTGGACAAAGCTCAAACAGCGTTGGCGCCTC
GTTGACGAGAATCTGCAGCATAGTGCGGGGGTGGATCTAAGGTGGCACAG
TATAACCAGCCCAAGTCACTCCGCCTGAAATCCGGTCTCATCTAAAACCG
CTTCAATGCGAAATCTCTCGTGAAAAGAGAGGCCCTTCTCCGAGTCGGAT
AACCTACCCAAGCAACGGATTGGTGTTGCGACAGATTGATAAAGGGTAAA
AACAAAAACGGTTCGATTTGGTGTCAACGAAGCGTATTTAACAATTGACA
TCCCCAAAAAACGTAGGGGTGCGGAGGAACGGATGCACAAAAAGCTGTGA
ACAGTGCGTTTGCCTTTAGTCCTCGCAAAAAGCAAAAATCAAACAGGCTC
CTGCTGTCACATGGCCCTTTTACAGTGTTTCCCTTCGTTGTAGAATTCTA
AAAGTTCATTCCTATAGTATATCAATAGTGCTAAGATGTCGACCTGGGTA
TGTATACGAAAAAACATCTCTGCAGAACGGATGGCCAACGGGGATTAGGT
CATAACATGAGGCCAAGACAAAAAAAAGAAAGATCGAAACACATGCCACA
CATAGACGCCTCCGCAAGAGTTGCCTGCTGTACAAGCCAATAGCTGTTGA
CCGAAAGAAATTACACGGTGTTAAAACTAGCAAGCACGCCTGAGTCCTAC
TCGGCGTGCCTGGCGGGAGCTTAGCAAAGCCACTTTGAGCTCAGTTTCTG
GTACAAAGGTCGAGAACACAGGGACTGCACGTGCAACCCCATGTACTACA
TACAAGAGTCAAATCAAATTGTGTACTCTGTGTGTTCTCTGTTTTGTTCT
CATGGACCATCTTCGCCTACGACAATTGTCGGCTGTCATTATTCCTTTAC
GATCTCAAGTCCAGAGTTTCTCGTCAAACTACACTACCACAAAACAGCAC
TTGTGAATGGAAATGAATGCTGACTTCGTTCGGTTACACGCGGAGATCAT
TTTTCAGTATCTAATTGACGAGAACCCCACCGTTCGAGTTTCGAATTTTT
CGATATTTTTTCAGGAAACGTCAAATTAAAAGCCGTGATATTGGGATTAC
ATGTACATTTTCGGCTTCGAAACAGTCTGCATCCAAGGAATTCAACCCTT
TAAGTGCCGGTCTGCACCTAATCCCGATACACAGCCATTTTTCAGAAATC
GCATGACTGAAGAATAGAAAATATGTACCAAAACAATTTTGACGTTGGCA
AACGGAAACAGGTGGCAATGGTGCCGGAGAGGAGTCATCTCGAGGATCAT
CGCCTACCCGCGGTAACGGCGAGGATTCCAGCAGCAACAATCCTTCACGG
TCGAGCACGCCGACGATATCTATACACACGACCGCAGCAGCACCAACAGC
ACCAACAGCAACAGCAACAGCTGCCGGAGGAGGC back to topCoding sequence (CDS) from alignment at H-paniculata_contig3520:2022..9155- >mRNA_H-paniculata_contig3520.9372.1 ID=mRNA_H-paniculata_contig3520.9372.1|Name=mRNA_H-paniculata_contig3520.9372.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=984bp|location=Sequence derived from alignment at H-paniculata_contig3520:2022..9155- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCGCCAGCGCCCACAGATGTCAGTTATCATCGCAGCACCAATGTGAT
GGAATCATCGCAAAATGTAGCCACGACGGCCCAGGCTTCGGGGGTTGCCA
AAGACCAGCATGGCGCCGCTATTGGAGGTGGAGAGGGGCGTGCGTCCTGC
GCGGATGCGGGTCAGGGCGCTGCGGCGGTATCTGCGGAAGCGGCTGGAGG
GGCAGGACCGGGCAACATGCCCAGCGGAATCAGCGTACAGGAATTGAAGC
AGATGACTGCTTTGAGGATGGCTCATGCTCAGGGGCATGTACGGGTGGTC
AGCCCGTTCCAACCTTATGATGTCGCCAGCGCCCACAGATGTCAGTTATC
ATCGCAGCACCAATGTGATGGAATCATCGCAAAATGTAGCCACGACGGCC
CAGGCTTCGGGGGTTGCCAAAGACCAGCATGGCGCCGCTATTGGAGGTGG
AGAGGGGCGTGCGTCCTGCGCGGATGCGGGTCAGGGCGCTGCGGCGGTAT
CTGCGGAAGCGGCTGGAGGGGCAGGACCGGGCAACATGCCCAGCGGAATC
AGCGTACAGGAATTGAAGCAGATGACTGCTTTGAGGATGGCTCATGCTCA
GGGGCATGTACGGGTGGTCAGCCCGTTCCAACCTTATGGTGGCAATGGTG
CCGGAGAGGAGTCATCTCGAGGATCATCGCCTACCCGCGGTAACGGCGAG
GATTCCAGCAGCAACAATCCTTCACGGTCGAGCACGCCGACGATATCTAT
ACACACGACCGCAGCAGCACCAACAGCACCAACAGCAACAGCAACAGCTG
CCGGAGGAGGCGTGGCAATGGTGCCGGAGAGGAGTCATCTCGAGGATCAT
CGCCTACCCGCGGTAACGGCGAGGATTCCAGCAGCAACAATCCTTCACGG
TCGAGCACGCCGACGATATCTATACACACGACCGCAGCAGCACCAACAGC
ACCAACAGCAACAGCAACAGCTGCCGGAGGAGGC back to top
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