mRNA_H-paniculata_contig35124.9350.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig35124.9350.1
Unique NamemRNA_H-paniculata_contig35124.9350.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig35124.9350.1 vs. uniprot
Match: D8LI02_ECTSI (Prolyl endopeptidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI02_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 4.200e-24
Identity = 48/67 (71.64%), Postives = 58/67 (86.57%), Query Frame = 1 
Query:    4 LVATGDHDDRVCPLHSYKYMAELQYSIGSRE-DRKPLVIRIDVDCGHCTGKPTEKIIAEASDIYAFI 201
            L+ TGDHDDRVCPLHSYKY+AELQ++IGSR  ++KPL+IRID D GH  GKPT K++AEA+D YAFI
Sbjct:  695 LLTTGDHDDRVCPLHSYKYIAELQHTIGSRPGEKKPLLIRIDRDSGHGGGKPTAKVLAEAADTYAFI 761
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BLAST of mRNA_H-paniculata_contig35124.9350.1 vs. uniprot
Match: A0A7S0N0Y8_9CRYP (Prolyl endopeptidase n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0N0Y8_9CRYP)

HSP 1 Score: 88.2 bits (217), Expect = 3.500e-20
Identity = 41/67 (61.19%), Postives = 50/67 (74.63%), Query Frame = 1 
Query:    4 LVATGDHDDRVCPLHSYKYMAELQYSIGSREDR-KPLVIRIDVDCGHCTGKPTEKIIAEASDIYAFI 201
            LV TGDHDDRV PLHS KY A+LQY++  R  +  PL+IRI+   GH  GKPT+K+I E +DIYAFI
Sbjct:  125 LVTTGDHDDRVVPLHSLKYAAQLQYALAGRAGQTNPLLIRIETKAGHGAGKPTDKVIGEVADIYAFI 191
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BLAST of mRNA_H-paniculata_contig35124.9350.1 vs. uniprot
Match: UPI001F0E82C1 (prolyl endopeptidase-like n=2 Tax=Dermatophagoides farinae TaxID=6954 RepID=UPI001F0E82C1)

HSP 1 Score: 90.5 bits (223), Expect = 1.220e-19
Identity = 41/67 (61.19%), Postives = 51/67 (76.12%), Query Frame = 1 
Query:    1 SLVATGDHDDRVCPLHSYKYMAELQYSIGSREDRKPLVIRIDVDCGHCTGKPTEKIIAEASDIYAFI 201
            +++ T DHDDRV PLHSYKY+A+LQY +G R  RKPL+IRID   GH   KPT+KII +  DIY+FI
Sbjct:  772 TILFTADHDDRVVPLHSYKYIAQLQYQLGDRFARKPLLIRIDTGTGHGGAKPTDKIIDDTVDIYSFI 838
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BLAST of mRNA_H-paniculata_contig35124.9350.1 vs. uniprot
Match: A0A443SBD9_9ACAR (Prolyl endopeptidase (Fragment) n=1 Tax=Leptotrombidium deliense TaxID=299467 RepID=A0A443SBD9_9ACAR)

HSP 1 Score: 87.8 bits (216), Expect = 1.370e-19
Identity = 38/67 (56.72%), Postives = 51/67 (76.12%), Query Frame = 1 
Query:    1 SLVATGDHDDRVCPLHSYKYMAELQYSIGSREDRKPLVIRIDVDCGHCTGKPTEKIIAEASDIYAFI 201
            +L+ T DHD+RV PLHS KY+AELQY +G + +  PL+IR+DV  GH  GKPT K+I + +DIY+FI
Sbjct:  178 TLLLTADHDNRVSPLHSLKYIAELQYRLGKQVENVPLMIRVDVKAGHGAGKPTSKLIEDVTDIYSFI 244
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BLAST of mRNA_H-paniculata_contig35124.9350.1 vs. uniprot
Match: UPI0009E57490 (prolyl endopeptidase-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E57490)

HSP 1 Score: 87.0 bits (214), Expect = 1.400e-19
Identity = 42/67 (62.69%), Postives = 51/67 (76.12%), Query Frame = 1 
Query:    4 LVATGDHDDRVCPLHSYKYMAELQYSIGSREDR-KPLVIRIDVDCGHCTGKPTEKIIAEASDIYAFI 201
            L+ T DHDDRV PLHS KY+A+LQ+ +GS E +  PL+IR+D + GH  GKPT KII E SDIYAFI
Sbjct:  142 LLLTADHDDRVVPLHSLKYIAQLQHCVGSYEKQTNPLLIRVDTEAGHGFGKPTAKIIEEYSDIYAFI 208
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BLAST of mRNA_H-paniculata_contig35124.9350.1 vs. uniprot
Match: A0A485LQA1_9STRA (Prolyl endopeptidase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LQA1_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 2.010e-19
Identity = 39/67 (58.21%), Postives = 52/67 (77.61%), Query Frame = 1 
Query:    4 LVATGDHDDRVCPLHSYKYMAELQYSIGSREDRK-PLVIRIDVDCGHCTGKPTEKIIAEASDIYAFI 201
            L+ TGDHDDRV PLHS K +AE+Q+ +GS   +K PL+IRI+   GH  GKPT K++AEA+D+YA+I
Sbjct:  144 LLTTGDHDDRVVPLHSLKLIAEVQHKLGSHPSQKNPLLIRIETKAGHGAGKPTSKVLAEAADVYAYI 210
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BLAST of mRNA_H-paniculata_contig35124.9350.1 vs. uniprot
Match: A0A835YIC5_9STRA (Prolyl endopeptidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIC5_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 2.270e-19
Identity = 44/68 (64.71%), Postives = 52/68 (76.47%), Query Frame = 1 
Query:    1 SLVATGDHDDRVCPLHSYKYMAELQYSIGSRE-DRKPLVIRIDVDCGHCTGKPTEKIIAEASDIYAFI 201
            +L+ TGDHDDRV PLHSYKY A LQ  IGSR+ +  PL+IRID   GH  GKPT K+I E+SDI+AFI
Sbjct:  679 TLLTTGDHDDRVVPLHSYKYAAMLQSVIGSRKGENNPLLIRIDTRSGHGAGKPTSKVIEESSDIWAFI 746
[Close]
BLAST of mRNA_H-paniculata_contig35124.9350.1 vs. uniprot
Match: A0A0V0R7J8_PSEPJ (Prolyl endopeptidase n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0R7J8_PSEPJ)

HSP 1 Score: 89.4 bits (220), Expect = 3.100e-19
Identity = 39/67 (58.21%), Postives = 54/67 (80.60%), Query Frame = 1 
Query:    4 LVATGDHDDRVCPLHSYKYMAELQYSIGSREDRK-PLVIRIDVDCGHCTGKPTEKIIAEASDIYAFI 201
            L+ TGDHDDRV PLHSYKY+A LQ+ +G++E +K PL+I++D   GH  GKPT+K+I E +DIY+F+
Sbjct:  653 LLTTGDHDDRVVPLHSYKYIATLQHELGNKEYQKEPLLIKVDTKAGHGEGKPTQKVIEETADIYSFM 719
[Close]
BLAST of mRNA_H-paniculata_contig35124.9350.1 vs. uniprot
Match: A0A0P1B7E6_PLAHL (Prolyl endopeptidase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B7E6_PLAHL)

HSP 1 Score: 89.4 bits (220), Expect = 3.100e-19
Identity = 42/67 (62.69%), Postives = 51/67 (76.12%), Query Frame = 1 
Query:    4 LVATGDHDDRVCPLHSYKYMAELQYSIGSREDR-KPLVIRIDVDCGHCTGKPTEKIIAEASDIYAFI 201
            L+ TGDHDDRV PLHSYK +AELQY +G+ E +  PL+IRID   GH  GKPT KII E S+++AFI
Sbjct:  671 LLTTGDHDDRVVPLHSYKLIAELQYQLGNSESQTNPLLIRIDTKSGHGAGKPTTKIIEETSEVFAFI 737
[Close]
BLAST of mRNA_H-paniculata_contig35124.9350.1 vs. uniprot
Match: V4AYG5_LOTGI (Prolyl endopeptidase n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4AYG5_LOTGI)

HSP 1 Score: 89.0 bits (219), Expect = 4.230e-19
Identity = 41/67 (61.19%), Postives = 52/67 (77.61%), Query Frame = 1 
Query:    4 LVATGDHDDRVCPLHSYKYMAELQYSIGSREDRK-PLVIRIDVDCGHCTGKPTEKIIAEASDIYAFI 201
            L+ TGDHDDRV PLHS KY+AE+Q  +GS E +K PL+IRID   GH  GKPT+K+I E +DIY+F+
Sbjct:  633 LLLTGDHDDRVVPLHSLKYIAEVQRKVGSTEKQKNPLIIRIDTKSGHGAGKPTKKVIEEVTDIYSFL 699
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig35124.9350.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI02_ECTSI4.200e-2471.64Prolyl endopeptidase n=1 Tax=Ectocarpus siliculosu... [more]
A0A7S0N0Y8_9CRYP3.500e-2061.19Prolyl endopeptidase n=1 Tax=Cryptomonas curvata T... [more]
UPI001F0E82C11.220e-1961.19prolyl endopeptidase-like n=2 Tax=Dermatophagoides... [more]
A0A443SBD9_9ACAR1.370e-1956.72Prolyl endopeptidase (Fragment) n=1 Tax=Leptotromb... [more]
UPI0009E574901.400e-1962.69prolyl endopeptidase-like n=1 Tax=Orbicella faveol... [more]
A0A485LQA1_9STRA2.010e-1958.21Prolyl endopeptidase n=1 Tax=Aphanomyces stellatus... [more]
A0A835YIC5_9STRA2.270e-1964.71Prolyl endopeptidase n=1 Tax=Tribonema minus TaxID... [more]
A0A0V0R7J8_PSEPJ3.100e-1958.21Prolyl endopeptidase n=1 Tax=Pseudocohnilembus per... [more]
A0A0P1B7E6_PLAHL3.100e-1962.69Prolyl endopeptidase n=1 Tax=Plasmopara halstedii ... [more]
V4AYG5_LOTGI4.230e-1961.19Prolyl endopeptidase n=1 Tax=Lottia gigantea TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig35124contigH-paniculata_contig35124:442..1152 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score102.8
Seed ortholog evalue6.2e-20
Seed eggNOG ortholog2880.D8LI02
Preferred namePREP
KEGG koko:K01322
KEGG Pathwayko04614,map04614
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009966,GO:0010646,GO:0016787,GO:0016788,GO:0017171,GO:0019538,GO:0023051,GO:0033218,GO:0042277,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0048583,GO:0050789,GO:0050794,GO:0052689,GO:0065007,GO:0070011,GO:0070012,GO:0071704,GO:0140096,GO:1901564
EggNOG free text desc.serine-type exopeptidase activity
EggNOG OGsCOG1505@1,KOG2237@2759
EC3.4.21.26
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002
Exons2
Model size201
Cds size201
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930086.0580232-CDS-H-paniculata_contig35124:441..6061622930086.0580232-CDS-H-paniculata_contig35124:441..606Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig35124 442..606 +
1691481140.242511-CDS-H-paniculata_contig35124:441..6061691481140.242511-CDS-H-paniculata_contig35124:441..606Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig35124 442..606 +
1622930086.0734172-CDS-H-paniculata_contig35124:1116..11521622930086.0734172-CDS-H-paniculata_contig35124:1116..1152Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig35124 1117..1152 +
1691481140.2540824-CDS-H-paniculata_contig35124:1116..11521691481140.2540824-CDS-H-paniculata_contig35124:1116..1152Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig35124 1117..1152 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig35124.9350.1prot_H-paniculata_contig35124.9350.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig35124 442..1152 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig35124.9350.1

>prot_H-paniculata_contig35124.9350.1 ID=prot_H-paniculata_contig35124.9350.1|Name=mRNA_H-paniculata_contig35124.9350.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=67bp
SLVATGDHDDRVCPLHSYKYMAELQYSIGSREDRKPLVIRIDVDCGHCTG
KPTEKIIAEASDIYAFI
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mRNA from alignment at H-paniculata_contig35124:442..1152+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig35124.9350.1 ID=mRNA_H-paniculata_contig35124.9350.1|Name=mRNA_H-paniculata_contig35124.9350.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=711bp|location=Sequence derived from alignment at H-paniculata_contig35124:442..1152+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCCTTGGTCGCAACAGGGGATCATGACGACAGAGTGTGTCCCCTACACAG
CTACAAGTACATGGCCGAGCTGCAGTATTCGATCGGCTCGAGGGAAGACC
GAAAGCCGCTGGTGATCCGTATTGATGTGGACTGCGGCCACTGTACGGGG
AAGCCTACAGAGAAGGTAAAATTGTTCATATTTCACAAATCGGATGAGGG
TTCACTAGTCATTATCGTGCCGTGGCTTGAGCTCCTCCCCTCGCAGCGCT
TCCGAGTGGTAAAGAAAGAGGCTTTACACTCTGGGGTGGAAAGGAAAGGG
TTCCCTAGTCATTCTCCCCACCTCGGATTACTGTGAAATAGTCTTCATTT
GCGCCTCCATTGTTTTCCTTGTCACATCAAATTATCTCTGAGCCGTATCC
GGTTGGTTATTGAATAGCCCACAAGACATACATTCCTTGGGCGCACAACA
CGCAAGCATCACCGGTATAATCAACAAAATGACATTTTGACTTTGCTGTC
ATCCCTGATAGTCCCGCCATATGTATGGCGGTGGATCGGTCATTTTGCAG
GGAAAAGTATGTCATACTTCACGGCTGTATCACGTTGTGTTTGCTTTAAC
GTACTCGTGATTAACTCCCTGTCTTGTTTTTAATTCCTCCCCTTGCTTCG
GCTCTTCCCCTGTTGCCTTTTCCAGATAATTGCAGAAGCGTCGGACATTT
ATGCTTTCATC
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Coding sequence (CDS) from alignment at H-paniculata_contig35124:442..1152+

>mRNA_H-paniculata_contig35124.9350.1 ID=mRNA_H-paniculata_contig35124.9350.1|Name=mRNA_H-paniculata_contig35124.9350.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=402bp|location=Sequence derived from alignment at H-paniculata_contig35124:442..1152+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCCTTGGTCGCAACAGGGGATCATGACGACAGAGTGTGTCCCCTACACAG
CTACAAGTACATGGCCGAGCTGCAGTATTCGATCGGCTCGAGGGAAGACC
GAAAGCCGCTGGTGATCCGTATTGATGTGGACTGCGGCCACTGTACGGGG
AAGCCTACAGAGAAGTCCTTGGTCGCAACAGGGGATCATGACGACAGAGT
GTGTCCCCTACACAGCTACAAGTACATGGCCGAGCTGCAGTATTCGATCG
GCTCGAGGGAAGACCGAAAGCCGCTGGTGATCCGTATTGATGTGGACTGC
GGCCACTGTACGGGGAAGCCTACAGAGAAGATAATTGCAGAAGCGTCGGA
CATTTATGCTTTCATCATAATTGCAGAAGCGTCGGACATTTATGCTTTCA
TC
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