mRNA_H-paniculata_contig3510.9344.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig3510.9344.1 vs. uniprot
Match: D8LCZ3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCZ3_ECTSI) HSP 1 Score: 1237 bits (3200), Expect = 0.000e+0 Identity = 729/1096 (66.51%), Postives = 792/1096 (72.26%), Query Frame = 1
Query: 4 QVHERTVDSDFLIIILRDLIATRKDLHLVLMSATLNAELFSDYFGNAPKLNIPGYTFPVQEFYLEDALELTRTQIMPTVNRQGRVKRKPIGKEEFGEKVMKLSAEFPVGQYSHRTLESLAMYDESEVPLDVIVDLVQHIHNYEGEGAILIFLSGWEEISAVHDRLEALSNARHWRLYALHSQMPTSQQRDVFLRPPRGTRKIVIATNIAESSITIDDVVYVIDGGKHKEKSYDPEAKVQSLLPAWVSQASSKQRKGRAGRVQPGRCWHLYPRSKFGEMDEYQLPEIVRTSLESLCLQVRHLGLAVSGRGGVASFINKALTPPADTALDNALTLLTRIGAFRGDESLTPLGKHLALLPVEPQIGKALVFGCLLGCLDPVLTIAALLSQRNPFVMPMNKKEQADLAKRRFAQGEPSDHLCLYNAFEAWRMCPRRDQPDFCHMNFLSPSALRTASEVRGQFQALLRDAGLIPRDRDHLAELNRHSEMPKYWPVVRAAMSSGLYPNLVRVDYGKKKFKLLSSDHSTLNPHPSSVTAEGNLFNRRWAYYHEMCRTPGGLFIYDLTEAAPLPLLLFGAG--DPHARGRGGALINKSVSGSHIQGGXXXXXXXGKKKGYAQYPTVGPFAGVEPWVYFNVGGDQPRRMLEDIRAALDYVVGEHVGGARSSEKETRLINTVAQALVGEEELAHPTKPGGGHDRSHNAHGVMRTYNVDADD------------EYEFHKPGPP--------------------------GATGEYRGSGANVYHGYT-VTESSNTSSSSRSLYTSSGMGXXXXXXSYSSHASAPAAVGRVGLAGGGNNHSSDSNSSGHPSTGYHSHSHSGIHRGYGGSSPASSSAMSDKPPQV----GDARYAAAQAAVAAALRHTAVSASSSGMPAAVARSNAGYGQYSMYSPLQRGSHNGASGGSGSSNPASMGGGPSPGVEPVRYNPNPSSNGEASSSSGYHVHGGAG-GSVRADSXXXXGSQPRSLARQGNIAAHEYNPAGSRSRSSSAQPVSTVLGGGYHNYAVPPNAMPLGGGGGS-EG------QHYVHRSVSHGRGEASRDSRDRDVSGGRGGKRGRW 3132
+VHERTVDSDFLIIILRDL+ RKDL LVLMSATLNA+LFS+YF APKLNIPGYTFPV+E+YLEDALELTRTQI PTVNRQGRVKRKP+ +E+FG+K+ KL E G+YS RTL+S+AM+DESEVPLDVIVDLV+H+H YEGEGAILIFLSGWEEISAVHD+LEAL AR WRLYALHSQMPTSQQRDVFLRPPRG RKIVIATNIAESSITIDDVVYVIDGGKHKEKSYDPEAKVQSLLPAWVSQASSKQR+GRAGRVQPGRCWH+YPRSK EM+EYQLPEIVRTSLESLCLQVRHLGLA G+GGVA FINKALTPP ALDNALTLLTRIGAFR +ESLTPLGKHLALLPVEPQIGKALV GC+LGCLDPVLTIAALLSQRNPFVMPM+KKE+AD AKRRFAQGEPSDHLCLYNA+EAWRMCPRRDQ +FCH+NFLSPSALRTAS+VRGQFQ LLRDAGLIPRDR+ LAELNRHSEMPKYWPVVRAAM SGLYPNLVRVDYGKKKFKLLS+DHSTLNPHPSSVT+EGN FNRRWAYYHEMCRTPGGLFIYDLTEAAPLPLLLFGAG DP GR G LI+K V+G HIQGG GKKKGY P+VGPFAGVEPWVYF+VG D RR LEDIR+AL+YVVGEHVGGARSSE+ETRLINTVAQA VGEEELA+P KPGGGHDRS + HG M+ YNVDADD EY G G G+ + GY+ XXXXXX Y + S+ +GGG+ SG H YG SSP +S+KPP GD RYAA QAA L H++ S S G + ++AG GGGP RYNP SNGE+S GSV SQPRSLAR G +A+HE+ R S+ PVSTVLGG YHNYAVPP + PLGGG G EG HYV RSV RGE DSRDRD GGRGGKRGRW
Sbjct: 300 EVHERTVDSDFLIIILRDLVLQRKDLTLVLMSATLNADLFSNYFSQAPKLNIPGYTFPVEEYYLEDALELTRTQITPTVNRQGRVKRKPLDREQFGQKMSKL--EHLRGRYSQRTLQSMAMFDESEVPLDVIVDLVRHVHAYEGEGAILIFLSGWEEISAVHDKLEALPEARAWRLYALHSQMPTSQQRDVFLRPPRGVRKIVIATNIAESSITIDDVVYVIDGGKHKEKSYDPEAKVQSLLPAWVSQASSKQRRGRAGRVQPGRCWHVYPRSKVSEMNEYQLPEIVRTSLESLCLQVRHLGLAAGGKGGVAGFINKALTPPGVVALDNALTLLTRIGAFRTNESLTPLGKHLALLPVEPQIGKALVLGCMLGCLDPVLTIAALLSQRNPFVMPMSKKEEADQAKRRFAQGEPSDHLCLYNAYEAWRMCPRRDQQEFCHVNFLSPSALRTASDVRGQFQTLLRDAGLIPRDREQLAELNRHSEMPKYWPVVRAAMCSGLYPNLVRVDYGKKKFKLLSADHSTLNPHPSSVTSEGNPFNRRWAYYHEMCRTPGGLFIYDLTEAAPLPLLLFGAGQRDP---GRPGQLIHKLVTGPHIQGGGKKKK--GKKKGYQAPPSVGPFAGVEPWVYFDVGRDV-RRPLEDIRSALEYVVGEHVGGARSSERETRLINTVAQAFVGEEELANPPKPGGGHDRSQHHHGTMKAYNVDADDXXXXXXXXXXXXEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGYGSSSAIGSGGHGGYSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPPYGSS---------SGGGDRSGDHRGDSGRXXXXGH----------YGKSSPP----LSEKPPSHSMAGGDVRYAAPQAAPK--LGHSSSSMSGGGSSSMSGSAHAGGSFGXXXXXXXXXXXXXXXXXXXXXXXXXXGGGP------ARYNP---SNGESSGXXXXXXXXXXDPGSV---------SQPRSLARPGGVASHEFTRG--PMRPSTHSPVSTVLGGEYHNYAVPPGSAPLGGGSGXXEGGAGHPQHHYVSRSVPMSRGE---DSRDRDGHGGRGGKRGRW 1339
BLAST of mRNA_H-paniculata_contig3510.9344.1 vs. uniprot
Match: I2CQV2_NANGC (ATP-dependent RNA helicase DHX36 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=I2CQV2_NANGC) HSP 1 Score: 533 bits (1374), Expect = 1.340e-171 Identity = 291/563 (51.69%), Postives = 377/563 (66.96%), Query Frame = 1
Query: 334 YSHRTLESLAMYDESEVPLDVIVDLVQHIHNYEGEGAILIFLSGWEEISAVHDRLEALSNARHWRLYALHSQMPTSQQRDVFLRPPRGTRKIVIATNIAESSITIDDVVYVIDGGKHKEKSYDPEAKVQSLLPAWVSQASSKQRKGRAGRVQPGRCWHLYPRSKF-GEMDEYQLPEIVRTSLESLCLQVRHLGLAVSGRGGVASFINKALTPPADTALDNALTLLTRIGAFRGDESLTPLGKHLALLPVEPQIGKALVFGCLLGCLDPVLTIAALLSQRNPFVMPMNKKEQADLAKRRFAQGEPSDHLCLYNAFEAWRMCPRRDQP-DFCHMNFLSPSALRTASEVRGQFQALLRDAGLIPR-------DRDHLAELNRHSEMPKYWPVVRAAMSSGLYPNLVRVDYGKKKFKLLSSDHSTLNPHPSSVTA--EGN-------LFNRRWAYYHEMCRTPGGLFIYDLTEAAPLPLLLFGAGDPHARGRGGALINKSVSG----SHIQGGXXXXXXXGKKKGYAQYPTVGPFAGVEPWVYFNV-GGDQPRRMLEDIRAALDYVV 1953
YS RTLES+A +DE E+P ++ LV+ I EG GAIL+FL GWE+I+ VH+ L+ L +R WRLY LHSQ+P QQR++F PP G RKIV+ATNIAESSITIDDVVYV+DGGKHKEK+YD E K+ LLPAWVS+AS+ QRKGRAGRVQPG+CWHL+PR KF G++ +QLPEIVRT LESLCL VR L +A GRGG+ F+ KA+TPP DTA+ NAL LL IGA + DE LT LGK LA LPVEP IGKAL++G LL CLDPVLTI +LLS ++PFV+P+ +K++A +K + A GE SDH L +A++ W+ R Q DF NFLS L ++R QF LL+DAGL+P+ RD+ N H+ + WPVV+AA+ +GLYPN++RVDYGKK+ + L HPSS+ A EG+ LF+R W + + +TP GLF++D +E +PL +LL GAG P G+ LI S ++IQ KK + + F GVEPWVYF + GG Q +++D+R L Y++
Sbjct: 25 YSSRTLESMAAFDEDEIPYALVEALVKKIDAEEGPGAILVFLPGWEDITKVHETLQRLPQSRRWRLYPLHSQLPMDQQREIFSPPPPGLRKIVLATNIAESSITIDDVVYVLDGGKHKEKTYDAEKKLCMLLPAWVSRASAIQRKGRAGRVQPGKCWHLFPRRKFEGDLIPFQLPEIVRTPLESLCLSVRALNVARRGRGGIVEFLQKAVTPPTDTAMSNALELLLHIGAIQPDEHLTSLGKCLATLPVEPTIGKALIYGVLLRCLDPVLTIVSLLSTKSPFVLPLERKDEAARSKIQLAGGEASDHKALLSAYDGWKEAEMRGQGRDFAWRNFLSGPTLVMVDDMRKQFLTLLKDAGLLPQYEPRTGLGRDYY---NAHA---RSWPVVKAALLAGLYPNVLRVDYGKKRPTFFTQTDGMLKLHPSSINAPPEGSGGPPAPVLFHR-WMMFFQKLKTPAGLFVFDTSEVSPLAVLLLGAGLPEKHGQ---LIPISSLDFPFDNYIQAKR-------SKKAHIHFANAKTFLGVEPWVYFEIAGGPQATALIQDVRQTLLYLL 570
BLAST of mRNA_H-paniculata_contig3510.9344.1 vs. uniprot
Match: A0A2R5GQJ2_9STRA (ATP-dependent RNA helicase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GQJ2_9STRA) HSP 1 Score: 507 bits (1305), Expect = 2.410e-160 Identity = 304/721 (42.16%), Postives = 427/721 (59.22%), Query Frame = 1
Query: 4 QVHERTVDSDFLIIILRDLIATRKDLHLVLMSATLNAELFSDYFGNA-----PKLNIPGYTFPVQEFYLEDALELTRTQIMPTVNRQGR---------------------VKRKPIGKEEFGEKVMKLSAEFPVGQYSHRTLES-LAMYDESEVPLDVIVDLVQHIHNY----EGEG-AILIFLSGWEEISAVHDRLEALSNARH-WRLYALHSQMPTSQQRDVFLRPPRGTRKIVIATNIAESSITIDDVVYVIDGGKHKEKSYDPEAKVQSLLPAWVSQASSKQRKGRAGRVQPGRCWHLYPRSKFGE-MDEYQLPEIVRTSLESLCLQVRHLGLAVSGRGGVASFINKALTPPADTALDNALTLLTRIGAF-RGDESLTPLGKHLALLPVEPQIGKALVFGCLLGCLDPVLTIAALLSQRNPFVMPMNKKEQADLAKRRFAQGEPSDHLCLYNAFEAWRMCPR-RDQPDFCHMNFLSPSALRTASEVRGQFQALLRDAGLIPRDRDHLAELNRHSEMPKYWPVVRAAMSSGLYPNLVRVDYGKKKFKLLSSDHSTLNPHPSSVTA--EGNLFNRRWAYYHEMCRTPGGLFIYDLTEAAPLPLLLFGAGDPHARGRGGALINKSVSGSHIQGGXXXXXXXGKKKGYAQYPTVGPFAGVEPWVYFNVGGDQPRRMLEDIRAALDYVVGEHVGGARSS-EKETRLINTVAQALVGEEELAH 2049
+VHER++DSDFLI+ILRDL+A RKDL +VLMSATL+A++F+ YF A P L+IPG TFPV+ YLEDA+E T + G + ++++ +K S E G YS T+ + L ++E E+PL ++ L+ HI E EG A+LIFL GWE+I +HD+LE L+ + H W L+ LH M T+QQR +F PP G RK+++ATNIAESSITIDDV +VID KHKEK+YDP A + LLP WVS+AS+ QR+GRAGRV+ G+CWHL PR + E+ LPE+VRT LE LCLQVR L +A +GG+ F+N+ALTPPA+ +L NA+ LL RIGA R DE+LT LG+ LA LPV PQIGK+L+ GC+LGCL+P+LT+ A+LSQR FV P+ KE AD AK FA G PSDH+ + NA+ W + R DF NFL+ + L A ++R Q+ LLRDA L+ A R + W VV+A + +GLYP++ R+D +++ + T+ HP SV A +G + RW +H+ T GG+F+YD +E +PLP+++FG AL ++ V+ + G + AQ + ++ WVYF + R++ D R A+D V+ +G + + I+ + +A E +A+
Sbjct: 233 EVHERSIDSDFLIVILRDLLARRKDLRVVLMSATLDADMFAKYFETAFESKVPVLHIPGRTFPVEALYLEDAVEATGCTDLSAEGSSGSRXXXXXXXXXXXXXXXXXXXXXXXSDLQQQQYV--ALKRSLERD-GMYSSGTVRAVLENFNEEEIPLQLVGQLLTHIDEAHPMDESEGHAVLIFLPGWEDIRKLHDQLEFLNASHHRWALFPLHGAMGTAQQRGIFAPPPAGKRKVILATNIAESSITIDDVSFVIDSCKHKEKTYDPVANISCLLPTWVSRASALQRRGRAGRVRAGKCWHLVPRLHVEDNFAEHALPEMVRTPLEELCLQVRALEVAPKRKGGLLWFLNRALTPPAEQSLVNAIDLLNRIGALTREDEALTALGRCLATLPVGPQIGKSLIMGCVLGCLEPILTLTAILSQRTIFVAPLQSKEAADKAKAAFANGYPSDHMAMLNAYMQWEDAEKYRQGKDFAWRNFLNHNQLLMARDIREQYLTLLRDARLVSAGHGSNAIDARLNRNANEWAVVKACLLAGLYPHVGRLDIKRRRALIFIKGLPTVKAHPGSVNAKTQGAEWQHRWVAFHDKVMTAGGVFLYDTSEVSPLPIVMFGEA---------ALEDEGVT--KVDGSFMVTV----QNKTAQEKRI---IKLQDWVYFGCEDPELPRLIADCRWAVDRVLQRAMGHQEKALPSQDAFIDALCRAFTANEAIAY 932
BLAST of mRNA_H-paniculata_contig3510.9344.1 vs. uniprot
Match: A0A7S0MWB1_9CHLO (RNA helicase n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MWB1_9CHLO) HSP 1 Score: 491 bits (1264), Expect = 2.620e-156 Identity = 268/502 (53.39%), Postives = 334/502 (66.53%), Query Frame = 1
Query: 307 LSAEFPVGQYSHRTLESLAMYDE-SEVPLDVIVDLVQHIHNYEGEGAILIFLSGWEEISAVHDRLEALSNARHWRLYALHSQMPTSQQRDVFLRPPRGTRKIVIATNIAESSITIDDVVYVIDGGKHKEKSYDPEAKVQSLLPAWVSQASSKQRKGRAGRVQPGRCWHLYPRSKFGEMDEYQLPEIVRTSLESLCLQVRHLGLAVSGRGGVASFINKALTPPADTALDNALTLLTRIGAFRGDESLTPLGKHLALLPVEPQIGKALVFGCLLGCLDPVLTIAALLSQRNPFVMPMNKKEQADLAKRRFAQGEPSDHLCLYNAFEAWRMCPRRDQP----DFCHMNFLSPSALRTASEVRGQFQALLRDAGLIPRDRDHLAELNRHSEMPKYWPVVRAAMSSGLYPNLVRVDY----------GKKKFKLLSSDHSTLNPHPSSVTAEG-----NLFNRRWAYYHEMCRTPGGLFIYDLTEAAPLPLLLFGAGDPH---ARGR 1743
L+A Y+ E++A +DE + +P+ ++ LVQ I EG+GA+LIFL GWE+IS V D L++L HW LY LH +PTSQQR +F RPP G RKIV+ATNIAESSITIDDV+YVID GKHKEK+YD EAK+ LLPAWVSQAS+ QR+GRAGRVQ G C+HL+P + F + E+QLPE+VRT L LCLQVR L LA +G GG+ SF+ KA+TPP A NAL LL IGA DESLTPLG+HL+ LP+EPQ+GK LV+ LLGCL P L++ ALLS R PF+MP+ KKEQAD AKR + GEPSDH L NA++ WR P DF NFLS AL A + GQ + L+D+GLI D D + ++RH+ W + +A +++GLYPNLVRVDY G+ KF + DH + HP SV A G + + RW Y + +T GG FI+D TE PLPLLLFGAGDP ARGR
Sbjct: 28 LAAALAAKGYNKSVFEAIAGFDEDAPIPIGLVTALVQMIDK-EGDGAVLIFLPGWEDISKVVDSLKSLG-CPHWLLYPLHGSLPTSQQRGIFDRPPPGVRKIVVATNIAESSITIDDVIYVIDCGKHKEKTYDAEAKIACLLPAWVSQASAVQRRGRAGRVQAGVCFHLFPSALFPTLQEFQLPEMVRTPLNQLCLQVRALELAPAGAGGIESFLLKAVTPPGAKATCNALDLLLHIGALCPDESLTPLGRHLSALPMEPQMGKVLVYAALLGCLSPALSVVALLSGRPPFLMPLEKKEQADRAKRSLSHGEPSDHAALINAYKGWRDAYENGGPRAAADFAWRNFLSTPALHMAHDAIGQLRNALQDSGLISPDTDRVGFMDRHANQ---WGLTKACLAAGLYPNLVRVDYQDSQRGTGRAGRTKF--FTRDHGWVKLHPGSVNAPGEREGSSYWTHRWLIYGDKVKTQGGDFIFDSTEVPPLPLLLFGAGDPFCPPARGR 522
BLAST of mRNA_H-paniculata_contig3510.9344.1 vs. uniprot
Match: A0A6T6CK03_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6CK03_9RHOD) HSP 1 Score: 488 bits (1257), Expect = 1.750e-153 Identity = 289/694 (41.64%), Postives = 412/694 (59.37%), Query Frame = 1
Query: 4 QVHERTVDSDFLIIILRDLI-ATRKDLHLVLMSATLNAELFSDYFGNAPKLNIPGYTFPVQEFYLEDALELTRTQIMPTV-------NRQGRVKRKPIGKEEFGEKVMKLSAEFPVG--QYSHRTLESLAMYD-ESEVPLDVIVDLVQHIHNYEGEGAILIFLSGWEEISAVHDRLE---ALSNARHWRLYALHSQMPTSQQRDVFLRPPRGTRKIVIATNIAESSITIDDVVYVIDGGKHKEKSYDPEAKVQSLLPAWVSQASSKQRKGRAGRVQPGRCWHLYPRSKFGEMDEYQLPEIVRTSLESLCLQVRHLGLAVSGRGGVASFINKALTPPADTALDNALTLLTRIGAFRGD-ESLTPLGKHLALLPVEPQIGKALVFGCLLGCLDPVLTIAALLSQRNPFVMPMNKKEQADLAKRRFAQGEPSDHLCLYNAFEAWRMCP-RRDQPDFCHMNFLSPSALRTASEVRGQFQALLRDAGLIPRDRDHLAELNRHSEMPKYWPVVRAAMSSGLYPNLVRVDYGKKKFKLLSSDHSTLNPHPSSVTAEGNLFNRRWAYYHEMCRTPGGLFIYDLTEAAPLPLLLFGAGDPHARGRGGALINKSVSGSHIQGGXXXXXXXGKKKGYAQYPTVGPFAGVEPWVYFNVGGDQPRRMLEDIRAALDYVVGEHVGGARSSEKET---RLINTVAQALV 2028
++HERT+++DFL+IILRDLI +T K++ ++LMSATLNA +F+ YF + P ++IPG+T+PV E++LED +E+T Q + +++ R K K + E++ L V +YS+ TLESLA E + LD+I +++ HI +GA+LIFL GW++IS + D+L+ +A +++ LHS +PT QR +F RPP G RKI+++TNIAE+SIT+DDVV+VID GK KEK+YD V LLPA+VS+ASS+QR+GRAGR+QPG C+HL+ M++YQLPEI+RT LESLCLQV+ L L V V+ F++KAL PP A +NA+ LL IGA D E LTPLGKHL+ P++P++GK L++ + CLDPVLTIAA L RNPFVMP+N+KE+AD K RFA G SDH NAF W+ + F NFLS S+L E++ QF LL DAG I + ++ + WP++ + +++GLYPN+ R+D+G+K+ KLL+ + T+ PHP SV F W ++E ++ LFI D T PL L LFG GR +QG + G T+ A P++ F + +R +D VV H+ +++ T R I V +LV
Sbjct: 192 EIHERTLEADFLLIILRDLIRSTNKNVRVILMSATLNAGMFAQYFDDCPTVHIPGFTYPVTEYFLEDIIEMTGFQFRESQGGSFRPRDQRSREKAKQMRNRNPAEEIEHLERSLSVNGKRYSNSTLESLANAAFEDNISLDLIEEILIHIVEKNEDGAVLIFLPGWDDISKLCDKLKNNVRFRDASKYQILPLHSSLPTVNQRQIFERPPPGIRKIIVSTNIAETSITVDDVVFVIDSGKFKEKTYDAATNVSCLLPAFVSKASSRQRRGRAGRIQPGFCFHLFSSIDHANMEDYQLPEILRTPLESLCLQVKALKLGV-----VSKFLSKALEPPDPRATNNAMELLRVIGALYTDREELTPLGKHLSNFPLDPRLGKMLIYAVIFSCLDPVLTIAASLGFRNPFVMPLNRKEEADETKMRFATGLFSDHAAYLNAFCQWKNAGGSKGGSRFAWSNFLSHSSLEMIDEMKDQFLRLLEDAGFISG-----RVVGKYDKNSTCWPLIISILTAGLYPNIARIDFGRKRLKLLTKNDGTVKPHPGSVNKFNASFAHHWMVFYEKVKS-SDLFILDSTAVPPLALCLFG-------GR-----------IKVQGKMIVVDTGDDRLGLGG--TIADLAESVPFLCFQTESSDTAFSVRHLREIVDTVVARHMQDPERAQQLTDVKRAIEVVIDSLV 854
BLAST of mRNA_H-paniculata_contig3510.9344.1 vs. uniprot
Match: A0A7S2WNW9_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WNW9_9STRA) HSP 1 Score: 494 bits (1273), Expect = 4.640e-153 Identity = 281/598 (46.99%), Postives = 383/598 (64.05%), Query Frame = 1
Query: 4 QVHERTVDSDFLIIILRDLIATRKDLHLVLMSATLNAELFSDYFGNA-----PKLNIPGYTFPVQEFYLEDALELTRTQIMPTVNRQGRVKRKPIG---------KEEFGEKVMKLSAEFPVGQ--YSHRTLESLA-MYDESEVPLDVIVDLVQHI-HNY---EGEG-AILIFLSGWEEISAVHDRLEALSNARH--WRLYALHSQMPTSQQRDVFLRPPRGTRKIVIATNIAESSITIDDVVYVIDGGKHKEKSYDPEAKVQSLLPAWVSQASSKQRKGRAGRVQPGRCWHLYPRSKFG-EMDEYQLPEIVRTSLESLCLQVRHLGLAVSGRGGVASFINKALTPPADTALDNALTLLTRIGAFRGDESLTPLGKHLALLPVEPQIGKALVFGCLLGCLDPVLTIAALLSQRNPFVMPMNKKEQADLAKRRFAQGEPSDHLCLYNAFEAWRMCPR-RDQPDFCHMNFLSPSALRTASEVRGQFQALLRDAGLIPRDRDHLAELNRHSEMPKYWPVVRAAMSSGLYPNLVRVDYGKKKFKLLSSDHSTLNPHPSSVTA--EGNLFNRRWAYYHEMCRTPGGLFIYDLTEAAPLPLLLF 1713
+VHER++DSDFLI+ILRDL+ RKDL +V+MSATLNAE F+ YF + P LNIPG TFPV FYLEDA+ELT M T + G KR G + GE+ +L + YS RT+ ++ +D S++P++VI L++ I +Y + +G A+L+FL GWE+I ++ LE N +H W L LH M T+ Q+ +F RPP G RK+V+ATNIAESSITIDDV +VID KHKEK+YD E + LLP WVS+AS+ QR+GRAGRV+ G+ WHL P+ E D+Y LPEIVRT L+ LC+Q+R LGLA G GGV F+NKA+TPP++ + +NA+ LL RIGAF E LT +G LA LP+ PQIGK+L+ C+LGCL+PV+ + ++LSQR F+ ++KKE+AD AK F G SDH + NA+ W R R+ F +FL+ + L+ EV Q+ LL DAG+I +D LNRHS+ W VV+A M +GLYPN+ R+D + + + PHP+SV A E +++RW YH+ RT GG++++D +E +PLPL LF
Sbjct: 359 EVHERSIDSDFLIVILRDLLVRRKDLRIVMMSATLNAETFASYFAKSLDVDIPILNIPGRTFPVDAFYLEDAIELTNCHSM-TDDPMGGQKRSNYGGGGRNNSKQPTQSGEQKRELENSLMTSRKRYSARTVATVCDEFDPSKIPIEVIRALIETIDRDYPVDDKDGHAVLVFLPGWEDIRKTNELLEE-RNKQHKKWLLCPLHGMMGTADQKKIFNRPPPGKRKVVLATNIAESSITIDDVAFVIDSAKHKEKTYDEELNIACLLPTWVSKASASQRRGRAGRVRAGKAWHLVPKHMHDTEFDDYALPEIVRTPLDQLCMQIRALGLAKPGDGGVLEFLNKAITPPSEKSSENAVELLKRIGAFDQSEGLTAMGSCLATLPMGPQIGKSLIMACILGCLEPVVLLTSMLSQRTIFISTLDKKEEADAAKHTFTDGIRSDHRAMLNAYYQWDDEERYRNGKQFAWEHFLNHNQLKMTREVADQYITLLSDAGVIKKDGMTNKRLNRHSDN---WAVVKACMVAGLYPNVGRLDASGRFPTVYIKGLGIVKPHPASVNAKAEAGQWSKRWVMYHDKVRTQGGIYLFDTSEISPLPLALF 951
BLAST of mRNA_H-paniculata_contig3510.9344.1 vs. uniprot
Match: UPI00125E169F (DExH-box ATP-dependent RNA helicase DExH1 isoform X1 n=4 Tax=Ipomoea TaxID=4119 RepID=UPI00125E169F) HSP 1 Score: 486 bits (1251), Expect = 2.890e-151 Identity = 278/606 (45.87%), Postives = 381/606 (62.87%), Query Frame = 1
Query: 4 QVHERTVDSDFLIIILRDLIATRKDLHLVLMSATLNAELFSDYFGNAPKLNIPGYTFPVQEFYLEDALELTRTQIMPTV-NRQGRVKRKPIGKEEFGEKVMKLSAEFPVGQ----YSHRTLESLAMYDESEVPLDVIVDLVQHIHNYEGEGAILIFLSGWEEISAVHDRLEA---LSNARHWRLYALHSQMPTSQQRDVFLRPPRGTRKIVIATNIAESSITIDDVVYVIDGGKHKEKSYDPEAKVQSLLPAWVSQASSKQRKGRAGRVQPGRCWHLYPRSKFGEMDEYQLPEIVRTSLESLCLQVRHLGLAVSGRGGVASFINKALTPPADTALDNALTLLTRIGAFRGDESLTPLGKHLALLPVEPQIGKALVFGCLLGCLDPVLTIAALLSQRNPFVMPMNKKEQADLAKRRFAQGEPSDHLCLYNAFEAWRMCPRRDQPD-FCHMNFLSPSALRTASEVRGQFQALLRDAGLIPRDRDHLAELNRHSEMPKYWPVVRAAMSSGLYPNLVRVDYGKKKFKLLSSDHSTLNPHPSSVTAEGNLFNRRWAYYHEMCRTPGGLFIYDLTEAAPLPLLLFGAGDPHARGRGGALINKSVSGSHIQGG 1794
++HER +D DFL+IILRDL+ R DL L+LMSAT+NAELFS YFGNAP ++IPG T+PV E +LED LE TR +I P N QG +R+ +E + + +L + + YS T +SL + S++ L ++ +QHI +EG+GAIL+FL+GW++IS + D+++ L + R + + LH MPT QR++F RPP RKIV+ATNIAESSITIDDVVYVID GK KE SYD K+ LLP+W+S+AS+ QR+GRAGRVQPG C+ LYP+ M EYQLPEI+RT L+ LCL ++ L L G ++SF+NKAL PP ++ NA+ LL IGA E LTPLG+HL LP++P IGK L+ G CL+P LTIAA L+ R+PFV+P+N+KE+AD AKR FA SDH+ L A+E W+ R+ Q FC NFLSP ++ +++R QF LL D G I + + A ++E +V A + +GLYPN+V+ K+ S D ++ HP+SV A +LF + Y E +T +FI D T + LL+FG G + +KS G + GG
Sbjct: 395 EIHERGMDEDFLLIILRDLLPRRPDLRLILMSATINAELFSKYFGNAPTIHIPGLTYPVSELFLEDVLEKTRYRIKPEFDNVQGNSRRRHRQQESKKDPLTELFEDVDIDSHYKGYSMTTRQSLETWSGSQLDLGLVEATIQHICCHEGDGAILVFLTGWDDISKLLDKIKVNNFLGDPRKFLVLPLHGSMPTVNQREIFDRPPPNVRKIVLATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYRLYPKLLHDAMLEYQLPEILRTPLQELCLHIKSLQL-----GAISSFLNKALQPPDPLSVQNAIELLRTIGALDDAEELTPLGRHLCTLPLDPNIGKMLLMGSFFRCLNPALTIAAALAYRDPFVLPINRKEEADAAKRSFAGDSCSDHIALLKAYEGWKDAKRQGQERAFCWENFLSPITMQMMADMRMQFLDLLSDIGFIDKSKGPQA----YNEYSNDLEMVCAILCAGLYPNVVQCKRRGKRTAFYSKDVGKVDIHPASVNASVHLFPLPFLVYSEKVKT-SSIFIRDSTNISDYTLLMFG---------GNLIPSKSGDGIEMLGG 981
BLAST of mRNA_H-paniculata_contig3510.9344.1 vs. uniprot
Match: A0A2R6XFW7_MARPO (RNA helicase n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XFW7_MARPO) HSP 1 Score: 484 bits (1246), Expect = 5.490e-150 Identity = 267/583 (45.80%), Postives = 380/583 (65.18%), Query Frame = 1
Query: 4 QVHERTVDSDFLIIILRDLIATRKDLHLVLMSATLNAELFSDYFGNAPKLNIPGYTFPVQEFYLEDALELTRTQI----MPTVNRQGRVKRKPIGKEEFGEKVMK---LSAEFPVGQYSHRTLESLAMYDESEVPLDVIVDLVQHIHNYEGE-GAILIFLSGWEEISAVHDRLEA---LSNARHWRLYALHSQMPTSQQRDVFLRPPRGTRKIVIATNIAESSITIDDVVYVIDGGKHKEKSYDPEAKVQSLLPAWVSQASSKQRKGRAGRVQPGRCWHLYPRSKFGEMDEYQLPEIVRTSLESLCLQVRHLGLAVSGRGGVASFINKALTPPADTALDNALTLLTRIGAFRGDESLTPLGKHLALLPVEPQIGKALVFGCLLGCLDPVLTIAALLSQRNPFVMPMNKKEQADLAKRRFAQGEPSDHLCLYNAFEAWRMCPRRD-QPDFCHMNFLSPSALRTASEVRGQFQALLRDAGLIPRDRDHLAELNRHSEMPKYWPVVRAAMSSGLYPNLVRVDYGKKKFKLLSSDHSTLNPHPSSVTAEGNLFNRRWAYYHEMCRTPGGLFIYDLTEAAPLPLLLFG 1716
++HER ++ DFL+IILRDL+ R DL LVLMSAT+NAELFS YFGNAP ++IPG+TFPVQE +LED LE TR ++ P+ N G+ +R K + + + + AEF +YS T SL ++ E+ L ++ ++HI E E GA+L+FL+GW++IS + ++L+A L NA + L LH MPT QR++F PPRG RKIV+ATNIAE+SITIDDVVYVID GK KE SYD K+ LLP+W+S+AS+ QR+GRAGRV+ G C+HLYP+ + EM ++QLPEI+RT L+ LCLQ++ LGL G + +F++KAL PP A+ NA+ LL IGA E LTPLG HLA LPV+P++GK L+ G + CL P LTIAA L+ R+PFV+P+ +KE+AD ++RRFA SDH+ L A+++W+ R + +FC N+LSP L+ ++R QF L+ D G + D+ L E N +S + +V+A + +GL+P++V+ K+ + + + PHP+SV A N F W Y + +T G+++ T + LL+FG
Sbjct: 411 EIHERGMNEDFLLIILRDLLPRRPDLRLVLMSATINAELFSKYFGNAPMMHIPGFTFPVQELFLEDVLEKTRYRVGADQQPSSNYGGQRRRTQEKKRDPITQAFENADIDAEFR--RYSRGTQLSLKAWNGDELDLGLVESTIEHICERESEEGALLVFLTGWDDISKLMEKLKANAALGNASRYLLLPLHGSMPTINQREIFQPPPRGVRKIVLATNIAETSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVRAGVCYHLYPKLVYDEMLKFQLPEILRTPLQELCLQIKSLGL-----GSIGNFLSKALQPPEAMAVQNAIDLLKTIGALDDKEDLTPLGSHLAQLPVDPKVGKMLLMGAVFQCLGPALTIAAALAHRDPFVLPIERKEEADESRRRFAGDTQSDHVALLRAYDSWQAAKREGWEKNFCWTNYLSPPTLQMMEDMRRQFVDLISDIGFV--DKRRLQEYNVYSGDME---MVKAVLCAGLFPSVVQCKQRGKRTVFFTKEDGKVEPHPASVNARVNYFPEPWLVYSDKVKT-SGIYVRQSTNLSDYALLMFG 980
BLAST of mRNA_H-paniculata_contig3510.9344.1 vs. uniprot
Match: A0A2T8I298_9POAL (RNA helicase n=12 Tax=Paniceae TaxID=147428 RepID=A0A2T8I298_9POAL) HSP 1 Score: 478 bits (1229), Expect = 1.040e-149 Identity = 270/590 (45.76%), Postives = 369/590 (62.54%), Query Frame = 1
Query: 4 QVHERTVDSDFLIIILRDLIATRKDLHLVLMSATLNAELFSDYFGNAPKLNIPGYTFPVQEFYLEDALELTRTQIMPTVNRQGRVKRKP----IGKEEFGEKVMKLSAEFPVGQYSHRTLESLAMYDESEVPLDVIVDLVQHIHNYEGEGAILIFLSGWEEISAVHDRLEA---LSNARHWRLYALHSQMPTSQQRDVFLRPPRGTRKIVIATNIAESSITIDDVVYVIDGGKHKEKSYDPEAKVQSLLPAWVSQASSKQRKGRAGRVQPGRCWHLYPRSKFGEMDEYQLPEIVRTSLESLCLQVRHLGLAVSGRGGVASFINKALTPPADTALDNALTLLTRIGAFRGDESLTPLGKHLALLPVEPQIGKALVFGCLLGCLDPVLTIAALLSQRNPFVMPMNKKEQADLAKRRFAQGEPSDHLCLYNAFEAWRMCPRRDQP-DFCHMNFLSPSALRTASEVRGQFQALLRDAGLIPRDRDHLAELNRHSEMPKYWPVVRAAMSSGLYPNLVRVDYGKKKFKLLSSDHSTLNPHPSSVTAEGNLFNRRWAYYHEMCRTPGGLFIYDLTEAAPLPLLLFGAG-DPHARGRG 1746
++HER ++ DFLIIILRDL+ R DL LVLMSAT+NAELFS YFG+AP ++IPG+TFPV EF+LED LE TR +I + RK + + + + + G YS T +SL + +E+ L ++ + +++I YE EGAIL+FL+GW+EIS + D+++ L ++ + + LH MPT QR++F RPP RKIV+ATNIAESSITIDDVVYVID GK KE SYD K+ LLP+W+S+AS+ QR+GRAGRVQPG C+ LYP+ M ++QLPEI+RT L+ LCL ++ L L G V+SF+ K+L PP ++ NA+ LL IGA E LT LG+HL LP++P +GK L+ G + CLDPVLTIAA L+ RNPFV+P+++KE+AD KR FA SDH+ L AF AW+ R + FC NFLSP L+ ++R QF LL D G + + R A S++ VVRA + +GLYPN+V+ K+ + D ++ HPSSV A N F + Y E +T +++ D T + LLLFG P+ G G
Sbjct: 248 EIHERGMNEDFLIIILRDLLPRRPDLRLVLMSATINAELFSKYFGDAPIMHIPGFTFPVTEFFLEDVLEKTRYKIKSERDSSAGSSRKKRLSSVKSDPLSDLFEDIDIDKEYGNYSITTRQSLEAWSAAELDLSLVENTIEYICRYEAEGAILVFLTGWDEISKLLDKIKGNTFLGSSNRFLVLPLHGSMPTVNQREIFDRPPTNMRKIVLATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASTHQRRGRAGRVQPGFCYRLYPKVIHDAMPQFQLPEILRTPLQELCLTIKSLQL-----GAVSSFLAKSLQPPDPLSVKNAIELLKTIGALDDMEELTSLGRHLCTLPLDPNLGKMLLMGSVFQCLDPVLTIAAALAYRNPFVLPIDRKEEADAVKRSFAGDSCSDHIALLKAFVAWKEAKRSGRERSFCWENFLSPMTLKMMDDMRNQFFDLLSDIGFVSKTRGVKAYNQYGSDLE----VVRAVLCAGLYPNVVQCKRRGKRTAFYTKDVGKVDIHPSSVNAFVNQFPLPYLVYSEKVKT-ASIYVRDSTNISDYALLLFGGSLSPNKTGEG 827
BLAST of mRNA_H-paniculata_contig3510.9344.1 vs. uniprot
Match: UPI000F552325 (ATP-dependent DNA/RNA helicase DHX36-like n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=UPI000F552325) HSP 1 Score: 478 bits (1229), Expect = 2.480e-148 Identity = 262/603 (43.45%), Postives = 378/603 (62.69%), Query Frame = 1
Query: 4 QVHERTVDSDFLIIILRDLIATRKDLHLVLMSATLNAELFSDYFGNAPKLNIPGYTFPVQEFYLEDALELTRTQIMPTVNRQGRV-------KRKPIGKEEFGEKVMKLSAEFPV-------------------GQYSHRTLESLAMYDESEVPLDVIVDLVQHIHNYEGEGAILIFLSGWEEISAVHDRL--EALSNARHWRLYALHSQMPTSQQRDVFLRPPRGTRKIVIATNIAESSITIDDVVYVIDGGKHKEKSYDPEAKVQSLLPAWVSQASSKQRKGRAGRVQPGRCWHLYPRSKFGEMDEYQLPEIVRTSLESLCLQVRHLGLAVSGRGGVASFINKALTPPADTALDNALTLLTRIGAFRGDESLTPLGKHLALLPVEPQIGKALVFGCLLGCLDPVLTIAALLSQRNPFVMPMNKKEQADLAKRRFAQGEPSDHLCLYNAFEAWRMCPRRD-QPDFCHMNFLSPSALRTASEVRGQFQALLRDAGLIPRDRDHLAELNRHSEMPKYWPVVRAAMSSGLYPNLVRVDYG---KKKFKLLSSDHSTLNPHPSSVTAEGNLFNRRWAYYHEMCRTPGGLFIYDLTEAAPLPLLLFG 1716
++HER + SDFLIII++DL+ R DL L+LMSATLN+E+FS YF N +IPG+T+PVQE YLE+ +E TR +I GR K+ GK E ++ ++ + + G++S +T+ +L D + L+++V L+ HI EGAIL+FL GW++IS +HD+L + L N+ +R+ LHS MP++ QR+VF RPP G RKIVIATNIAE+SITIDDVV+V+D GK KEK+YD + L P W+S+ASS+QR+GRAGRVQPG C+HL+ + + +D+YQLPE++RT LE LCLQ++ L L G + SF++KAL PP + A+ NAL L ++ A +E LTPLG HLA LPV P++GK ++FG + CLDPVLT+A++L ++PFV P+ K+++A+ A+ RFA SDHL L AF+ W R+ + D+C NFLS + +R +++ QF LL D G + + N +S+ K +V+A + +GLYPN+ +++ + KL + T+ HP SV AE ++ W YHE ++ LF+YD T AP PLL FG
Sbjct: 324 EIHERDILSDFLIIIVKDLLPKRPDLKLILMSATLNSEMFSAYFDNCKMAHIPGFTYPVQEVYLEEIIEKTRYEITEKAGVSGRGDRPEPKWKKYRRGKSEAKDRRLEKTNAWLTDSQEDEKQMEWQQYLNSLTGRFSSKTITTLRNMDLERIDLELLVRLITHISLRMEEGAILVFLPGWDDISKLHDKLKTQTLFNSDKFRIIPLHSMMPSTNQREVFDRPPEGVRKIVIATNIAETSITIDDVVFVVDAGKVKEKTYDVYHNIACLQPVWISKASSRQRRGRAGRVQPGYCFHLFTQLRAQSLDDYQLPEMLRTPLEELCLQIKILKL-----GMIRSFLSKALQPPEEQAVINALESLQQLKALDANEDLTPLGHHLAALPVNPRVGKIILFGAIFSCLDPVLTVASVLGFKDPFVFPLGKQKEAEQARLRFAGDTRSDHLALLKAFQGWETSVRKGIERDYCWRNFLSVNTMRMIKDMKQQFSGLLYDIGFLESSNPKASSANYNSDNLK---LVKAILCAGLYPNVASINHNPRFSRPPKLRTHQDGTVYLHPKSVNAEVRVYEDNWLIYHEKMKSTS-LFLYDSTMIAPFPLLFFG 917 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3510.9344.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3510.9344.1 >prot_H-paniculata_contig3510.9344.1 ID=prot_H-paniculata_contig3510.9344.1|Name=mRNA_H-paniculata_contig3510.9344.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1045bp MQVHERTVDSDFLIIILRDLIATRKDLHLVLMSATLNAELFSDYFGNAPKback to top mRNA from alignment at H-paniculata_contig3510:5331..16729- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3510.9344.1 ID=mRNA_H-paniculata_contig3510.9344.1|Name=mRNA_H-paniculata_contig3510.9344.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11399bp|location=Sequence derived from alignment at H-paniculata_contig3510:5331..16729- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3510:5331..16729- >mRNA_H-paniculata_contig3510.9344.1 ID=mRNA_H-paniculata_contig3510.9344.1|Name=mRNA_H-paniculata_contig3510.9344.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=6270bp|location=Sequence derived from alignment at H-paniculata_contig3510:5331..16729- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |