mRNA_H-paniculata_contig35044.9330.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig35044.9330.1 vs. uniprot
Match: D8LKR2_ECTSI (Sodium/hydrogen exchanger family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKR2_ECTSI) HSP 1 Score: 177 bits (449), Expect = 8.670e-50 Identity = 87/110 (79.09%), Postives = 99/110 (90.00%), Query Frame = 1
Query: 19 YPGPVVGVVLGMLGSFSLGYIIDDGLTEITLTVIVCFSAFMISEATKLEVSGVLAVVTTGLVMSFYARGRISPGVEETMHTFWSMATYVANTVIFFISGLIIGDRALFDD 348
+ GP+VG+ LGM GSF LGYIIDD +TEIT+TVIVCFS+F+ISEAT L VSGVLA VT GLVMSFYA GRISPGVE +MHTFWSMATYVANTVIFF+SGLIIGD+A+F+D
Sbjct: 147 FGGPMVGLALGMFGSFLLGYIIDDAMTEITVTVIVCFSSFIISEATTLHVSGVLAAVTAGLVMSFYAGGRISPGVEHSMHTFWSMATYVANTVIFFVSGLIIGDQAIFND 256
BLAST of mRNA_H-paniculata_contig35044.9330.1 vs. uniprot
Match: A0A6H5L0H9_9PHAE (Na_H_Exchanger domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H9_9PHAE) HSP 1 Score: 131 bits (330), Expect = 4.420e-33 Identity = 63/108 (58.33%), Postives = 82/108 (75.93%), Query Frame = 1
Query: 25 GPVVGVVLGMLGSFSLGYIIDDGLTEITLTVIVCFSAFMISEATKLEVSGVLAVVTTGLVMSFYARGRISPGVEETMHTFWSMATYVANTVIFFISGLIIGDRALFDD 348
GP VG GM+GSF++GYI++D L+EIT TV+VCFSAF+++EAT L VSG+L+VV GL MSFY R RISP V+E++ FWS+ Y+ANTVIFF++G RA D
Sbjct: 253 GPAVGFFTGMIGSFAIGYILEDHLSEITCTVVVCFSAFLLAEATILRVSGILSVVIAGLYMSFYGRPRISPSVQESLREFWSLWGYMANTVIFFLTGFTAATRAFGSD 360
BLAST of mRNA_H-paniculata_contig35044.9330.1 vs. uniprot
Match: A0A7S1UK40_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UK40_9STRA) HSP 1 Score: 117 bits (294), Expect = 3.270e-28 Identity = 55/113 (48.67%), Postives = 79/113 (69.91%), Query Frame = 1
Query: 25 GPVVGVVLGMLGSFSLGYIIDDGLTEITLTVIVCFSAFMISEATKLEVSGVLAVVTTGLVMSFYARGRISPGVEETMHTFWSMATYVANTVIFFISGLIIGDRALFDDHIEVS 363
G V G+ +G ++ YI+ DG++EIT+T+I F AF+++EAT L VSGV+AVV G +MS + R SPGVE T+H FW +A Y ANTVIFF+SGLI+ +++ + I+ S
Sbjct: 231 GAVAGIAVGAACVIAISYILHDGMSEITITIIGAFGAFLVAEATGLHVSGVIAVVMVGFLMSHVGKARFSPGVEHTLHGFWEIAGYGANTVIFFVSGLIMSEKSFYTPEIQAS 343
BLAST of mRNA_H-paniculata_contig35044.9330.1 vs. uniprot
Match: A0A5A8DG13_CAFRO (Cyclic nucleotide-binding domain-containing protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DG13_CAFRO) HSP 1 Score: 117 bits (294), Expect = 3.310e-28 Identity = 53/112 (47.32%), Postives = 80/112 (71.43%), Query Frame = 1
Query: 25 GPVVGVVLGMLGSFSLGYIIDDGLTEITLTVIVCFSAFMISEATKLEVSGVLAVVTTGLVMSFYARGRISPGVEETMHTFWSMATYVANTVIFFISGLIIGDRALFDDHIEV 360
GP++G + + +L Y+ +D ++EIT+TV+ C+S FMI+EAT L SGVLAVVT G++MS + + +SP VE MH FW M +Y +NTVIF +SG+II + L+ +HI++
Sbjct: 228 GPLLGAIFAAISIVALSYLYNDAVSEITVTVVGCYSVFMIAEATMLHTSGVLAVVTLGVLMSGFGKVHVSPEVEHAMHGFWEMLSYFSNTVIFLLSGVIIAHKTLYSEHIDL 339
BLAST of mRNA_H-paniculata_contig35044.9330.1 vs. uniprot
Match: A0A4D9CXX3_9STRA (Na_H_Exchanger domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CXX3_9STRA) HSP 1 Score: 108 bits (270), Expect = 5.740e-25 Identity = 51/110 (46.36%), Postives = 80/110 (72.73%), Query Frame = 1
Query: 25 GPVVGVVLGMLGSFSLGYIIDDGLTEITLTVIVCFSAFMISEATKLEVSGVLAVVTTGLVMSFYARGRISPGVEETMHTFWSMATYVANTVIFFISGLIIGDRALFDDHI 354
GP+VG+ +G L S+ LG+I++D L+EIT TV+V + +F+++E+T L SGVLA+V GL MSFY RGR+S V +++FW++A ++ NT+IF ++GL + R L +I
Sbjct: 216 GPIVGLCVGALASYILGFILNDPLSEITTTVVVGYGSFILAESTGLHASGVLAMVVAGLYMSFYGRGRVSARVRAELNSFWAIAGFITNTLIFVVAGLQMAMRGLRSTYI 325
BLAST of mRNA_H-paniculata_contig35044.9330.1 vs. uniprot
Match: A0A6H5LPB6_9PHAE (Na_H_Exchanger domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LPB6_9PHAE) HSP 1 Score: 107 bits (268), Expect = 8.380e-25 Identity = 49/108 (45.37%), Postives = 78/108 (72.22%), Query Frame = 1
Query: 25 GPVVGVVLGMLGSFSLGYIIDDGLTEITLTVIVCFSAFMISEATKLEVSGVLAVVTTGLVMSFYARGRISPGVEETMHTFWSMATYVANTVIFFISGLIIGDRALFDD 348
GP +G V+G++G+F LGY+I+D L E++LTV++ FS F + EAT+++VSGVL +V G+V+S+Y + R+S V ++ FW + A+T IFF+SGLI+ A+ +D
Sbjct: 236 GPAIGAVIGIMGAFVLGYVINDALVEVSLTVLLAFSTFALCEATRVKVSGVLGIVACGVVLSYYGKPRVSSPVLPSLMDFWKTLQFFADTTIFFLSGLIVIGVAVNED 343
BLAST of mRNA_H-paniculata_contig35044.9330.1 vs. uniprot
Match: A0A836CH43_9STRA (Sodium/hydrogen exchanger family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH43_9STRA) HSP 1 Score: 106 bits (265), Expect = 2.710e-24 Identity = 55/141 (39.01%), Postives = 88/141 (62.41%), Query Frame = 1
Query: 25 GPVVGVVLGMLGSFSLGYIIDDGLTEITLTVIVCFSAFMISEATKL---------------------------EVSGVLAVVTTGLVMSFYARGRISPGVEETMHTFWSMATYVANTVIFFISGLIIGDRALFDDHIEVST 366
GP++G+ +G++GSF LG I+DD +EIT+T+++C+SAF+++EAT L +VSG+L+VVT GL +S++ARGRIS + M WSM +YV+ T++F +GL+IG+ LF + I+ +
Sbjct: 149 GPLLGLAVGIVGSFVLGRILDDAFSEITITIVLCYSAFLLAEATALLFPQPISCDSAHVLSTATAAIACAPQIQVSGILSVVTLGLFLSYHARGRISNRAGDGMVVAWSMLSYVSVTMVFVTTGLVIGNEVLFANAIDAAA 289
BLAST of mRNA_H-paniculata_contig35044.9330.1 vs. uniprot
Match: F0Y140_AURAN (Na_H_Exchanger domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y140_AURAN) HSP 1 Score: 104 bits (260), Expect = 1.210e-23 Identity = 50/100 (50.00%), Postives = 72/100 (72.00%), Query Frame = 1
Query: 25 GPVVGVVLGMLGSFSLGYIIDDGLTEITLTVIVCFSAFMISEATKLEVSGVLAVVTTGLVMSFYARGRISPGVEETMHTFWSMATYVANTVIFFISGLII 324
GPVVG +G + LGY+++D L EIT+T+I C++AF ++E + SGVL+VV G+ +S Y RGRIS VEE +H+FW + +VANT +FF+SGLI+
Sbjct: 204 GPVVGTAIGWCAATLLGYVLNDPLNEITITLITCYAAFAVAEGI-VGTSGVLSVVFAGMYLSRYGRGRISADVEENLHSFWGVLAHVANTAVFFLSGLIM 302
BLAST of mRNA_H-paniculata_contig35044.9330.1 vs. uniprot
Match: A0A836CJL4_9STRA (Cation/H+ exchanger (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJL4_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 3.460e-23 Identity = 46/100 (46.00%), Postives = 71/100 (71.00%), Query Frame = 1
Query: 25 GPVVGVVLGMLGSFSLGYIIDDGLTEITLTVIVCFSAFMISEATKLEVSGVLAVVTTGLVMSFYARGRISPGVEETMHTFWSMATYVANTVIFFISGLII 324
GP +G VLG+ + +L I++D L EITLT+++C+S ++++E T + VSGVLAVV GL +S + R +SP V+ M FW++ + NTVIFF++G+II
Sbjct: 139 GPAIGFVLGLAAAQALRLIVNDALAEITLTLVMCYSTWLVAENTPIHVSGVLAVVVMGLTLSRHGRPFVSPSVQGFMDDFWNLLEFCTNTVIFFVAGIII 238
BLAST of mRNA_H-paniculata_contig35044.9330.1 vs. uniprot
Match: W7T4P8_9STRA (Salt overly sensitive 1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T4P8_9STRA) HSP 1 Score: 100 bits (248), Expect = 5.030e-22 Identity = 45/111 (40.54%), Postives = 80/111 (72.07%), Query Frame = 1
Query: 25 GPVVGVVLGMLGSFSLGYIIDDGLTEITLTVIVCFSAFMISEATKLEVSGVLAVVTTGLVMSFYARGRISPGVEETMHTFWSMATYVANTVIFFISGLIIGDRALFDDHIE 357
GP +G+V+G L S+ LG +++D +EIT+T++ + A++++E E SGVL++V GL +SF+ GRIS V ++ +FW+MA +++ T+IFF+SGLI+ ++AL + ++
Sbjct: 222 GPAIGLVVGALTSYILGVLLNDPASEITMTILCGYGAYLLAELA--EASGVLSMVVAGLYLSFHGLGRISARVTGSLKSFWAMAAFISETIIFFVSGLIMAEKALISETVQ 330 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig35044.9330.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig35044.9330.1 >prot_H-paniculata_contig35044.9330.1 ID=prot_H-paniculata_contig35044.9330.1|Name=mRNA_H-paniculata_contig35044.9330.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=125bp SPAVEYYPGPVVGVVLGMLGSFSLGYIIDDGLTEITLTVIVCFSAFMISEback to top mRNA from alignment at H-paniculata_contig35044:758..1802- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig35044.9330.1 ID=mRNA_H-paniculata_contig35044.9330.1|Name=mRNA_H-paniculata_contig35044.9330.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1045bp|location=Sequence derived from alignment at H-paniculata_contig35044:758..1802- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig35044:758..1802- >mRNA_H-paniculata_contig35044.9330.1 ID=mRNA_H-paniculata_contig35044.9330.1|Name=mRNA_H-paniculata_contig35044.9330.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=750bp|location=Sequence derived from alignment at H-paniculata_contig35044:758..1802- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |