mRNA_H-paniculata_contig3504.9329.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3504.9329.1
Unique NamemRNA_H-paniculata_contig3504.9329.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig3504.9329.1 vs. uniprot
Match: A0A6H5JSK3_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JSK3_9PHAE)

HSP 1 Score: 188 bits (477), Expect = 1.210e-52
Identity = 84/121 (69.42%), Postives = 102/121 (84.30%), Query Frame = 2 
Query:  326 RQVTAEELEKEMTEWDLPLILDVFAVWCGPCLMLKPELEKVADVLEGKCRVLKLDSDEHTDMASALNVYGLPTMMYMKDGELRHKTEGSMPADEILQLADLHFFGGVPP--ADPTDSLFID 682
            R VT EELE E+TEW+LP+ILDVFA WCGPC+ LKPE+EK++  LEGKCRVLKLDSDE  DMA ALN+YGLPT++YMKDG+++H+TEG +PA+E+LQLAD+H FG  PP   DP D LFID
Sbjct:   73 RLVTGEELEVELTEWELPMILDVFATWCGPCIQLKPEIEKLSQALEGKCRVLKLDSDEEEDMAGALNIYGLPTVIYMKDGKIQHRTEGFLPAEEMLQLADIHLFGKPPPEVTDPADDLFID 193
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BLAST of mRNA_H-paniculata_contig3504.9329.1 vs. uniprot
Match: A0A835Z7J6_9STRA (Thioredoxin-related protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7J6_9STRA)

HSP 1 Score: 149 bits (375), Expect = 1.610e-38
Identity = 64/125 (51.20%), Postives = 94/125 (75.20%), Query Frame = 2 
Query:  314 LAGVRQVTAEELEKEMTEWDLPLILDVFAVWCGPCLMLKPELEKVADVLEGKCRVLKLDSDEHTDMASALNVYGLPTMMYMKDGELRHKTEGSMPADEILQLADLHFFGGVPPADPTDSLFIDTS 688
            +  VR++T  E E E+ +   P++LD+FAVWCGPC+ML PELEK A+ L G+ RVLK+DSD+   + SAL VYGLPT++Y+KDG++ ++TEG+MPA+ I+++A +   G   P DP+D LFI+T+
Sbjct:   60 MGAVREITGAEFEVELADTSSPILLDIFAVWCGPCVMLAPELEKAAEELGGQVRVLKIDSDKEDAITSALRVYGLPTLLYIKDGQIVYRTEGAMPAEAIVEVASVKLLGAPEPDDPSDGLFIETN 184
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BLAST of mRNA_H-paniculata_contig3504.9329.1 vs. uniprot
Match: A0A7S2V5P5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5P5_9STRA)

HSP 1 Score: 131 bits (329), Expect = 1.400e-31
Identity = 54/118 (45.76%), Postives = 85/118 (72.03%), Query Frame = 2 
Query:  326 RQVTAEELEKEMTEWDLPLILDVFAVWCGPCLMLKPELEKVADVLEGKCRVLKLDSDEHTDMASALNVYGLPTMMYMKDGELRHKTEGSMPADEILQLADLHFFGG-VPPADPTDSLF 676
            R VT EELE E T+WD P++LD++A WCGPCL+L PEL+KVA     + RVLK+DS+   +++ A  V GLPT+M+++DGE++ + EG++P +E++++ D H F G +P  D  + ++
Sbjct:   94 RSVTGEELEVEFTDWDTPMVLDIYATWCGPCLILAPELDKVAQHFGDRLRVLKMDSEAEPEISGAFKVRGLPTIMFLQDGEIKARIEGALPGEELIKIVDYHLFDGPLPMEDDEEGIY 211
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BLAST of mRNA_H-paniculata_contig3504.9329.1 vs. uniprot
Match: A0A7S3TU68_EMIHU (Hypothetical protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3TU68_EMIHU)

HSP 1 Score: 128 bits (321), Expect = 4.440e-31
Identity = 57/123 (46.34%), Postives = 84/123 (68.29%), Query Frame = 2 
Query:  287 PSRLRPPTALAGVRQVTAEELEKEMTEWDLPLILDVFAVWCGPCLMLKPELEKVADVLEGKCRVLKLDSDEHTDMASALNVYGLPTMMYMKDGELRHKTEGSMPADEILQLADLHFFGGVPPA 655
            PS   P  A+  VRQVT EE E E+ +   P++LDVFAVWCGPC ++ PE++KVA+    +CRVLK+D+D+  ++A  L V GLPT++ + D  +  + EG++ ADE+ ++ D HFFGG  P+
Sbjct:   38 PSSRSPALAMGAVRQVTTEEFEAELQDCATPILLDVFAVWCGPCQLMAPEMDKVAEHYGDRCRVLKIDADDEAEVADTLQVRGLPTVLLINDMSVVMRAEGALMADELKEIVDFHFFGGPKPS 160
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BLAST of mRNA_H-paniculata_contig3504.9329.1 vs. uniprot
Match: A0A7S4HFL5_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4HFL5_9EUKA)

HSP 1 Score: 124 bits (311), Expect = 1.130e-29
Identity = 59/118 (50.00%), Postives = 83/118 (70.34%), Query Frame = 2 
Query:  323 VRQVTAEELEKEMTEWDLPLILDVFAVWCGPCLMLKPELEKVADVLEGKCRVLKLDSDEHTDMASALNVYGLPTMMYMKDGELRHKTEGSMPADEILQLADLHFFGGVPP--ADPTDS 670
            VRQVT  E E+E+ +   P+++DV AVWCGPC ++ P+LE+VA  LEGKCRVLK+DSDE  D+A+ L + GLPT++ + D  +  + EG++ ADE+ QL + H FGG  P  AD  +S
Sbjct:   48 VRQVTTAEFEEEIQDCSTPILVDVMAVWCGPCQLMAPQLEEVAKRLEGKCRVLKVDSDEEPDVANTLQIRGLPTILLINDMSIIMRAEGALMADELEQLVEHHAFGGPAPVIADQIES 165
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BLAST of mRNA_H-paniculata_contig3504.9329.1 vs. uniprot
Match: A0A7S4B483_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B483_CHRCT)

HSP 1 Score: 122 bits (307), Expect = 6.620e-29
Identity = 53/114 (46.49%), Postives = 83/114 (72.81%), Query Frame = 2 
Query:  311 ALAGVRQVTAEELEKEMTEWDLPLILDVFAVWCGPCLMLKPELEKVADVLEGKCRVLKLDSDEHTDMASALNVYGLPTMMYMKDGELRHKTEGSMPADEILQLADLHFFGGVPP 652
            A+  VR+V   + E+E+ +   P+++D+FA WCGPC ++ P+LEK A+ L  +CRVLK+D+DE  ++ASAL + GLPT++ + D ++  + EG++ +DEILQLA+ HFF G PP
Sbjct:   61 AMGLVRKVDTAQFEEEIQDCATPILVDIFATWCGPCQLMAPQLEKAAETLGDRCRVLKIDADEEPEVASALAIQGLPTVLLINDMKVVMRAEGALMSDEILQLAEHHFFNGPPP 174
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BLAST of mRNA_H-paniculata_contig3504.9329.1 vs. uniprot
Match: A0A4D9CS93_9STRA (Thioredoxin domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CS93_9STRA)

HSP 1 Score: 122 bits (306), Expect = 6.890e-29
Identity = 58/117 (49.57%), Postives = 84/117 (71.79%), Query Frame = 2 
Query:  317 AGVRQVTAEELEKEMTEWDLPLILDVFAVWCGPCLMLKPELEKVADVLEGKCRVLKLDSDEHTDMASALNVYGLPTMMYMKDGELRHKTEGSMPADEILQLADLHFFGGVPPADPTD 667
            +GV +VT EELEK++ E   P++LDV+A WCGPC +L  EL+KV  + + K RVLK+DSDE   +ASAL VYGLPT+ ++++G+L H+ EG+MPA E+ +L + H+  G P  +  D
Sbjct:   57 SGVLKVTGEELEKQLAEVGSPVLLDVYAQWCGPCQILAGELDKVKGLYKDKLRVLKVDSDEEPRIASALKVYGLPTIFFIREGQLIHRVEGAMPASELTKLVN-HYCFGAPEEEIKD 172
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BLAST of mRNA_H-paniculata_contig3504.9329.1 vs. uniprot
Match: A0A7S3T121_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3T121_9SPIT)

HSP 1 Score: 122 bits (306), Expect = 7.710e-29
Identity = 61/141 (43.26%), Postives = 93/141 (65.96%), Query Frame = 2 
Query:  245 GVATTARIMSNKAPP-----SRLRPPTALAGVRQVTAEELEKEMTEWDLPLILDVFAVWCGPCLMLKPELEKVADVLEGKCRVLKLDSDEHTDMASALNVYGLPTMMYMKDGELRHKTEGSMPADEILQLADLHFFGGVPP 652
            G +  A +++  AP      SR  PP  +A VR+VT  E E+E+ +   P++LDVFAVWCGPC ++ P+LE+VA+ L  K RVLK+D+DE  ++A  L + GLPT++ + D  +  + EG++ ADE+L++ + HFFGG  P
Sbjct:   29 GASADALVLTRIAPAPSTRTSRSAPPL-MAAVRKVTTAEFEEELQDCSTPILLDVFAVWCGPCQLMAPQLEQVAEKLGDKVRVLKVDADEEPEVADTLMIRGLPTVLLINDMSVVMRAEGALMADELLEIVNYHFFGGPKP 168
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BLAST of mRNA_H-paniculata_contig3504.9329.1 vs. uniprot
Match: A0A7S0HGI7_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HGI7_9EUKA)

HSP 1 Score: 118 bits (295), Expect = 2.350e-27
Identity = 56/110 (50.91%), Postives = 76/110 (69.09%), Query Frame = 2 
Query:  323 VRQVTAEELEKEMTEWDLPLILDVFAVWCGPCLMLKPELEKVADVLEGKCRVLKLDSDEHTDMASALNVYGLPTMMYMKDGELRHKTEGSMPADEILQLADLHFFGGVPP 652
            VRQV   E E+ + +   P+ILDVFAVWCGPC ++ P+LE VA+ L  K RVLK+D+D+   +AS L V GLPT+M++ D  +  + EG++ ADE+  LAD H FGG PP
Sbjct:   52 VRQVNTAEFEEAIQDCSTPIILDVFAVWCGPCQLMAPQLEIVAEKLGDKVRVLKIDADDEPVVASTLRVQGLPTVMFISDMSVVMRAEGALMADELEALADHHLFGGPPP 161
[Close]
BLAST of mRNA_H-paniculata_contig3504.9329.1 vs. uniprot
Match: A0A7S2MUL9_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MUL9_9STRA)

HSP 1 Score: 116 bits (290), Expect = 1.660e-26
Identity = 53/119 (44.54%), Postives = 77/119 (64.71%), Query Frame = 2 
Query:  332 VTAEELEKEMTEWDLPLILDVFAVWCGPCLMLKPELEKVADVLEGKCRVLKLDSDEHTDMASALNVYGLPTMMYMKDGE------------LRHKTEGSMPADEILQLADLHFFGGVPP 652
            VT EELE  +TEWD PL++D +A WCGPCL++ PE E  A  L+GK R  KLD+D+H +MA+ LN+ GLPT++++   E            L+++ EG++  + IL L + H+FGG  P
Sbjct:   65 VTGEELELMLTEWDEPLVVDAYATWCGPCLLMAPEFEAAAQELKGKVRFAKLDTDKHPEMAARLNIMGLPTLLFLDKFEGSDEEGPAAKAVLKNRIEGALRKESILALCEHHYFGGPRP 183
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3504.9329.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JSK3_9PHAE1.210e-5269.42Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
A0A835Z7J6_9STRA1.610e-3851.20Thioredoxin-related protein n=1 Tax=Tribonema minu... [more]
A0A7S2V5P5_9STRA1.400e-3145.76Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3TU68_EMIHU4.440e-3146.34Hypothetical protein n=2 Tax=Emiliania huxleyi Tax... [more]
A0A7S4HFL5_9EUKA1.130e-2950.00Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A7S4B483_CHRCT6.620e-2946.49Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A4D9CS93_9STRA6.890e-2949.57Thioredoxin domain-containing protein n=2 Tax=Mono... [more]
A0A7S3T121_9SPIT7.710e-2943.26Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]
A0A7S0HGI7_9EUKA2.350e-2750.91Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A7S2MUL9_9STRA1.660e-2644.54Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3504contigH-paniculata_contig3504:1400..7348 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score193.0
Seed ortholog evalue1.3e-46
Seed eggNOG ortholog2880.D7FZ61
Hectar predicted targeting categorychloroplast
EggNOG free text desc.glycerol ether metabolic process
EggNOG OGsCOG0526@1,KOG0910@2759
Ec32 ortholog descriptionthioredoxin-related protein
Ec32 orthologEc-02_006390.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size1618
Cds size567
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930081.8660905-UTR-H-paniculata_contig3504:1399..15291622930081.8660905-UTR-H-paniculata_contig3504:1399..1529Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3504 1400..1529 +
1691481139.0413396-UTR-H-paniculata_contig3504:1399..15291691481139.0413396-UTR-H-paniculata_contig3504:1399..1529Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3504 1400..1529 +
1622930081.9467402-UTR-H-paniculata_contig3504:6411..70611622930081.9467402-UTR-H-paniculata_contig3504:6411..7061Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3504 6412..7061 +
1691481139.1039727-UTR-H-paniculata_contig3504:6411..70611691481139.1039727-UTR-H-paniculata_contig3504:6411..7061Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3504 6412..7061 +
1622930081.969117-UTR-H-paniculata_contig3504:7077..73481622930081.969117-UTR-H-paniculata_contig3504:7077..7348Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3504 7078..7348 +
1691481139.1132326-UTR-H-paniculata_contig3504:7077..73481691481139.1132326-UTR-H-paniculata_contig3504:7077..7348Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3504 7078..7348 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930081.8815367-CDS-H-paniculata_contig3504:1529..18441622930081.8815367-CDS-H-paniculata_contig3504:1529..1844Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3504 1530..1844 +
1691481139.0552604-CDS-H-paniculata_contig3504:1529..18441691481139.0552604-CDS-H-paniculata_contig3504:1529..1844Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3504 1530..1844 +
1622930081.8973188-CDS-H-paniculata_contig3504:4870..49511622930081.8973188-CDS-H-paniculata_contig3504:4870..4951Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3504 4871..4951 +
1691481139.0740774-CDS-H-paniculata_contig3504:4870..49511691481139.0740774-CDS-H-paniculata_contig3504:4870..4951Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3504 4871..4951 +
1622930081.910687-CDS-H-paniculata_contig3504:5743..58051622930081.910687-CDS-H-paniculata_contig3504:5743..5805Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3504 5744..5805 +
1691481139.0873086-CDS-H-paniculata_contig3504:5743..58051691481139.0873086-CDS-H-paniculata_contig3504:5743..5805Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3504 5744..5805 +
1622930081.926642-CDS-H-paniculata_contig3504:6302..64111622930081.926642-CDS-H-paniculata_contig3504:6302..6411Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3504 6303..6411 +
1691481139.0955348-CDS-H-paniculata_contig3504:6302..64111691481139.0955348-CDS-H-paniculata_contig3504:6302..6411Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3504 6303..6411 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3504.9329.1prot_H-paniculata_contig3504.9329.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3504 1530..6411 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3504.9329.1

>prot_H-paniculata_contig3504.9329.1 ID=prot_H-paniculata_contig3504.9329.1|Name=mRNA_H-paniculata_contig3504.9329.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=189bp
MAPVIIQSMLLALIVATLAPCAAFVFVPGPAKYTLQRGGVATTARIMSNK
APPSRLRPPTALAGVRQVTAEELEKEMTEWDLPLILDVFAVWCGPCLMLK
PELEKVADVLEGKCRVLKLDSDEHTDMASALNVYGLPTMMYMKDGELRHK
TEGSMPADEILQLADLHFFGGVPPADPTDSLFIDTSTG*
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mRNA from alignment at H-paniculata_contig3504:1400..7348+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3504.9329.1 ID=mRNA_H-paniculata_contig3504.9329.1|Name=mRNA_H-paniculata_contig3504.9329.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5949bp|location=Sequence derived from alignment at H-paniculata_contig3504:1400..7348+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCTATTTAAGAACATGTTATGGATGAGGTACCCCCGTCCTTCATAATAAA
GGTACCGTTAACTACGCAAAGAGCACATCTTTGAGCATCTTCATCGTAGA
TTAACCAGCTTCAGTACCTCTGTCATTGAGATGGCGCCTGTGATCATACA
GTCGATGTTGCTGGCTCTGATTGTCGCCACATTGGCGCCCTGCGCTGCTT
TCGTATTTGTGCCTGGTCCTGCGAAATACACGCTCCAACGAGGAGGGGTA
GCGACGACCGCACGTATTATGTCAAACAAAGCGCCACCGTCAAGACTAAG
GCCACCAACAGCGTTGGCGGGAGTGCGGCAAGTCACCGCGGAGGAGCTTG
AGAAGGAGATGACGGAGTGGGACTTGCCTCTGATACTGGACGTCTTTGCC
GTGTGGTGTGGTCCATGTCTCATGCTGAAGCCGGAGCTTGAGAAGGTGAA
GACATCAATGTAAAGGGACGGCTGGGTACCAATAGGACTAACAGCGGTAA
CTGTCGGCATAGCCTTGACGCGTGTCACAGTCCGTGCGAAGTTTCGTAGG
TTAGGTGGGGCTTGAGTTTGGTCCGTGGGAGTCTTTCGGGTATACGGTAG
GGCTGTCCTTTTCTTCTTATTTTGATACTGGAAGAGTCACCACTACGCCC
CTGCAGTTCGTGCTGGTCCTCGACCTGCGCTCGCGATGGGTCGCCGCGCT
CATATGAAGGTTCATTTTCAGGGGCTACTAGAGTATAGACTTTAAAAAGA
TGTTCCGAAATGGTGACCACGCTGTAACAAATTAATGGGGAAGGGTATAC
CTTGTCCATTTTGGACATCTCCGGGTACAGCGGCACCAACCTGTAGACGG
CGAACTTTGTCGCCACACAAAAAAATGACCGACTGTCCTGTCTGAATGCT
TGTTCGACGGCTACCCAAGTTCCTTCTGCGTGGGAAACACGTCGCCACTG
TTTCCTGTCGCCACTGTTTCCTGTCGCCACTGCCGACAGTAAAATATACG
AATGGCTTGCGGTTGTTGTGAGATCTCGACCATGTGACAGTACTGTTGTG
CACATTTACCACTGTAATGTTGTGCAGTGCAATTCGCTGGGTAGTGGTAG
TGGATGTGTTGGTGTTGGATGATGATCCCTTTGTATGCCCACCACACACA
CTCATGTCTGGCGTTTATGACGCGGGTTCTAGCATCAGTAACCTGGTTGT
TACTAACGACCACACTATAAATCTCTATCGGCCGACTTTGACAGTGGCCA
TTAGAGCGTAGAGTAGTGGACAAAAAAAGGTGCAGAAAACGACACTTTCG
GAAAAAAGGGGATAGAGAAAGGGGACAGCCAACGCGAATAGAATCGAAGG
AATATATCTCGCGTGCTCTGTACACTTTGGGGTAGAGAAGGCTCTCTTTG
GGAGTATCCGATACTGCCTTGCATTGCTACGCCCAATGTCTCCTGTTTCG
CTCCCCTGTTTTTCATGGGCGTGTATAGGGGAATCATCAATTGGTCTTCA
GCGCGAAACCAACGGTATTCCAATCATGAGAGCGTCGTCTAGACATGTTA
GATGTGGCCGTGCTCTGTTATACCCGAAACTATCCTAAATGGACAGGGTA
TATACCCCCTTCCTGTACAGACAATAGCGAGTAAATTTTAATTTGGTGTA
AAGAGGTACATTTTTAATTTGTTAATTTTCGAACATTTGAGCAGGCCTTT
TTCTTGTGTCGTCAGCGGAAGCTTCGAGGGTGGATTTTTAGGTAACGCAC
GTTCTCGGAAGAAATTGTCGGATTGGTGTGCTGTCCATGATTAATTTCTT
AGTTCTTGTTTGTGTAGTGGTTGGAAACCGTTTTTTTTTAGGATGCTGAA
AAAAGGGTTACAGCCACTCTGAAAACGGCAGAGGGGGGTACAGCGGCCTG
CGCGTGTGGAGAGAGGCTTGTGAATGATTTGTGCGAGATTTCGTGCCCTC
GTTGTTTCTCCACGTGTACTCGATGCGCACAATCCTTAGGGTGCTCCACC
AATCATTCTTCCATCGAAGGTGCTCAACAACGCAGGAACTGGTGATTGTA
TAAGTGGCTCTTTACTTAAGATGGCGACAAAACGCTGCTTGTCAAAGGTG
TGGGGGGTTTTACCCCATCGCCCTATGATTGGAAAATCCCTCTTTTCTTC
TGTCGTGTACCCTTTTTTGTCTACTGTTGTACCTCGATGTATCTGCGGGG
TTCCCGTTTTCGTCCAGGGGCAAGTGCGTCAATATTCACCCCCTGTTATG
ATCAATACTCTCGCTTGAATGTTTAATCACAGTTAAAACCGACCAAATAA
GCCCACCGACAATTAGGGTGATCTGCCTTAGGGCCATATTCTGTGAAGCC
TATCAAGATTATATCCGCAAAAGACTGTTATGACCAAGATACTGCTCATA
ATAGTCTGGTCTTGATCCATCCACAGCATTAAAGGCACACCTCGGTACAC
ACACCCCATTGTATTGGCCAATAAAAACTCGCATCCTGGATTGGACTGAC
CAATGAAAATTGGACTCCTCGATTGCATCCCGGGCCGTTACGATTATATC
AAGGTTACATGGGAAAGCGTCGCTGATGCACACCGTTTTGCACAAGGTCC
ACGATGGTATTGCGACCGCCGTGTGTCGGTTCGGTTTCTGGCAGACAGTC
AACATCTCGCGCAGCTTCGAGTCATGAAGCGAAGTATGATTTTTGGTTTG
TTGAACATCGCGTGTACCGTCCGTTGAGAGAGGCTACAGACAATGTCGCT
ACCCCGTGACGATTGTAAAGAGAACCACGCTGCAGGGCGAACGGCAAGAC
GGGCGACCTAGGAGAAGAGTATCCTAAAGCGGGACGACTGTTCCTTGTGG
TTTGGCACCCCATTGAACGCTAGTTAGATGGATGGACAATGCTTGCAACA
AATTTCATGTATGTGATGCTGGGATCCATAATCCAAGTCCACGGTCTTGC
AGCACGTTGCACGTGTATTCGTTTGTGTGTGTGTGTAGTTAATTTTTTCG
TCTCCTGGACCAGTTCTCGCCCGTAATTGCGTGGGAAAATCTGCAGTGTG
AGGGGCTATACTTCGATCGTCCCCAAGAACATGGGCTGAGGTGGCCTATT
GCTCGCAATTATTTATTGAAAAAAGCTGAGACTTTACCCAACTGTAAAAT
GTCTTCTTTTTTTTCTCTCTTAATTTAATTCAAACGAAGCGTCTGTACCA
CAGAGCGAACAATCTGCCAAGTCCAATTCCTCGGTTCACGCCTTGTGTTA
TCACGCGGCAAAGACGGCAGTCCCATCCGCTCGGTCAATGATGTTCGAAC
TGAACATTGCGGTAGGTTCATGTTGGATCGTACCGAGCGTGACCTGAGCA
TGGTGCTGTTCATACGACCCGATGCCGGTCCTGCCATTCCGGATTGCGCA
CTGCTTGCTCATCACATCTCTTGTCCCCACCTCTCTATTCTTCCCTCGCT
TTTTGGTGGCGGGACAAACAGGTGGCAGATGTGTTGGAGGGGAAGTGCCG
TGTCTTGAAGCTGGATAGCGACGAACACACGGATATGGCCTCGGCTCTCA
ATGTGAGTATTCTAAAATATCTCGTCGTTGTTCCAACATGCTGGCGAGAA
TTACTGGCCGCCGTGTCTGCTCCAAAGCGTGGAAGCATTTGTTGAATGGA
CCTTGTGTTGTATAACGTAGCTCACGCCCGTGAACGGGTGACGAGCACCA
TGCGCGGCAGCTCTAGCTCTAGGTGGGCAGCTTTTGGGAAGTGACAGTAA
CTCAACGCTGTTCCAGGGCGCCACACAATTGCCCCCTGGTGGTCCACCGC
TAAAGGCACCACAGGGTCAAATTGTCGGTATGGGCTGCTCGTGTGTAAGC
GTTACATACTGTGGCGACGCAACGATTATCGGTTGTGTGGGGCATTAATC
TGTAGCAGTATCGTCGTGTGCGATGAAATTACCGGTTGGAGCATCAGTCT
TGAGCAAACGTTTGTCGTGCGGGACCAGAGTTCGAGGTGCAACCACTCTA
CTCTAGGAATTGGCTTACTCGAAGTCGCAAGTATGTATCGCTGCTGCCCT
ATACTGTGCGAATGGAGTTCTTCCTTGCTCCTTTCTTCAAACTTTGAACC
GCGTCCAATAGTTTTTGGCCCGAAGTGACTGCCATTGTCTTCTACGATTG
TGCCTTGGCGGGGTGTTGATGGTTTTGCATCTGCGACGACGCACGTCGGA
TTCGAATATGTAGCATATGCTTGTTTGAGAATGGTAGGAAGTTGGATTTG
TGGACAAAGTTCATACCTACGAATCAGACCTTTGCATCGTCACCCCTGCG
CCTCCCCTCTCTGATTTACCACCGATCGACGCATATGCCTCCAGGTTTAC
GGCCTGCCTACAATGATGTACATGAAAGACGGAGAACTGAGGCACAAAAC
TGAAGGGTGAGCGTGGATGGTTTGTACAACTTCTGAGACAATGTCGGCGT
CTGTTGTGCGAGGAACCGACCGACCATGCGAGAATAAACGCCAATGAGTC
ACTCGTATGGCACTGTTCGCCTTGTCCGTATTGTTTTTTTCCCTATCATT
TAGTGCGTCAATTGATCGGGACGCGCGGTCGGATGCGATGCCTCGGTACG
TGCCTTGTATTGTCACGCGGCGGGGGCAGTAATCCCACTCGCTCGTCTAC
GTTTGGAATTGACTGTGGTATACCCTTGAGGATATTCTTCTCCATCCCCT
AGGCAATGCTCCGCACCAATGTTTTCCCCCAACTTCGGTAAGAAAAGAAT
CTCGAGTCCCAATAACTGAACCTCACAAGTCTACCGTATGATGGGATATT
AAACACGTGAAGTTAACCATGACGCGCATGGTCTGGATAGCCCGTAACGA
ACTTTCGTTTTTTGTGTATATCACCGCCCTCTATTCGCGCGATGACCCGA
CAGGTCCATGCCTGCTGACGAGATCCTCCAACTCGCGGATTTACATTTCT
TCGGCGGCGTGCCACCCGCGGATCCCACAGATAGCCTTTTCATCGACACA
AGTACAGGGTAGGGGTGATCTCATGTAAATGGATCCGAGCAGAACAGTAG
AGACACTAGTTAGTTCCGGATGGGCCCATTGAAAAGTCGGCAATCATTGT
AGTCCTGACATGTTCATTCACTCGTGGTTCAAGCGCTTCAATCGGGGATC
GGGGAAGGATGAGGGCATGGGGATTTTTCTTTTCTCGGCCGTTGGGGCTC
TCTTTCCTCACAGCTCATGTGTGGCTAGTGCCTCGGTGCATAGCAGGCTT
TTCAGATCAGGATCGAACTCGTTCGTGTGTAGGGTGTGTTTATGCTTCCT
ACACGTCGCTTCCCATCTGGAAACTCATTCGCACGGTTACTTGTATCAAG
ATACTCTGGAGTACAGATACCTATGACGGGGGATGCGGCTCTTGTTGTAA
GATAGCTGTGTGAAATCTGATGCCGGTGGTCTGGGTGGGATTGTTCTGTC
GATGGGCCACTCAGTTGCGAGTGTCAAGTTTTTCGTGTTCCATTTTAGTA
ATTGTTCAATGCTTACTCAGTATGTTGTATGTTATATAGGCCAGGCAGAG
AGTGTCGCTGCTCTGATCATTTTGAAAGTGAAGTTCCGTTGATGGATGCC
TACTGTACCGCAATTAATCATTTGTTTTTGTCAAGCGTACGTTTAGTTAT
TGTCAAGTCTCAATGTTCCCCCCCCCCCCCCCCCCCCCGGGAATTACTAC
CCAAATTTGTCAGCAACATGTCAGTCTATCTGATTGTCGCAGTTGTTCAA
GTCTCGGGCAGAAAGAGGCCGGTGTAGGTTGGTACGGTTGCTCGAATCAG
TTTATTTAGTAGTATTTCAGCACTCAGGTAGGAAGGCCCATTACTCTAGC
TGTGTATTGGTAACGATGTGTTTACGAGATATTGGTACATCGACAAATAT
ATATATATTTTTAAGTCTTTAAACCGATATATCGATGATTTTGCCATTA
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Coding sequence (CDS) from alignment at H-paniculata_contig3504:1400..7348+

>mRNA_H-paniculata_contig3504.9329.1 ID=mRNA_H-paniculata_contig3504.9329.1|Name=mRNA_H-paniculata_contig3504.9329.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1134bp|location=Sequence derived from alignment at H-paniculata_contig3504:1400..7348+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGCCTGTGATCATACAGTCGATGTTGCTGGCTCTGATTGTCGCCAC
ATTGGCGCCCTGCGCTGCTTTCGTATTTGTGCCTGGTCCTGCGAAATACA
CGCTCCAACGAGGAGGGGTAGCGACGACCGCACGTATTATGTCAAACAAA
GCGCCACCGTCAAGACTAAGGCCACCAACAGCGTTGGCGGGAGTGCGGCA
AGTCACCGCGGAGGAGCTTGAGAAGGAGATGACGGAGTGGGACTTGCCTC
TGATACTGGACGTCTTTGCCGTGTGGTGTGGTCCATGTCTCATGCTGAAG
CCGGAGCTTGAGAAGATGGCGCCTGTGATCATACAGTCGATGTTGCTGGC
TCTGATTGTCGCCACATTGGCGCCCTGCGCTGCTTTCGTATTTGTGCCTG
GTCCTGCGAAATACACGCTCCAACGAGGAGGGGTAGCGACGACCGCACGT
ATTATGTCAAACAAAGCGCCACCGTCAAGACTAAGGCCACCAACAGCGTT
GGCGGGAGTGCGGCAAGTCACCGCGGAGGAGCTTGAGAAGGAGATGACGG
AGTGGGACTTGCCTCTGATACTGGACGTCTTTGCCGTGTGGTGTGGTCCA
TGTCTCATGCTGAAGCCGGAGCTTGAGAAGGTGGCAGATGTGTTGGAGGG
GAAGTGCCGTGTCTTGAAGCTGGATAGCGACGAACACACGGATATGGCCT
CGGCTCTCAATGTGGCAGATGTGTTGGAGGGGAAGTGCCGTGTCTTGAAG
CTGGATAGCGACGAACACACGGATATGGCCTCGGCTCTCAATGTTTACGG
CCTGCCTACAATGATGTACATGAAAGACGGAGAACTGAGGCACAAAACTG
AAGGGTTTACGGCCTGCCTACAATGATGTACATGAAAGACGGAGAACTGA
GGCACAAAACTGAAGGGTCCATGCCTGCTGACGAGATCCTCCAACTCGCG
GATTTACATTTCTTCGGCGGCGTGCCACCCGCGGATCCCACAGATAGCCT
TTTCATCGACACAAGTACAGGGTAGGTCCATGCCTGCTGACGAGATCCTC
CAACTCGCGGATTTACATTTCTTCGGCGGCGTGCCACCCGCGGATCCCAC
AGATAGCCTTTTCATCGACACAAGTACAGGGTAG
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