mRNA_H-paniculata_contig350.9319.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig350.9319.1 vs. uniprot
Match: A0A6J1WBU8_9SAUR (ankyrin repeat and SOCS box protein 10 n=1 Tax=Notechis scutatus TaxID=8663 RepID=A0A6J1WBU8_9SAUR) HSP 1 Score: 67.4 bits (163), Expect = 4.640e-10 Identity = 49/117 (41.88%), Postives = 65/117 (55.56%), Query Frame = 1
Query: 43 KLLLRNGAMVDAVYPKTGGTALHEAARLGQVLGAKYLLTSGADVEKRDGQGHTPLLAA-----AAGVGSKCGDMVRELIAAGARVDTVEDKTRNSPLHVASDLGNNDVVERLLRGGA 378
+LLLR+GA V+ + G T LH AARLG + L+ GAD+E R+ +G TPLLAA +A ++ +EL+ AGARV+ D+ PLH A N VV LL GA
Sbjct: 3 RLLLRHGAPVNCASEEEGDTPLHVAARLGLPEHLRLFLSHGADLEARNAEGETPLLAACALPHSAQAAEPYYEVCKELVEAGARVNAA-DRDLQRPLHQACKQANPRVVALLLAHGA 118
BLAST of mRNA_H-paniculata_contig350.9319.1 vs. uniprot
Match: UPI000D6A0F60 (ankyrin repeat and SOCS box protein 10-like n=1 Tax=Python bivittatus TaxID=176946 RepID=UPI000D6A0F60) HSP 1 Score: 62.8 bits (151), Expect = 3.370e-8 Identity = 49/130 (37.69%), Postives = 70/130 (53.85%), Query Frame = 1
Query: 22 KGHVNIVK----LLLRNGAMVDAVYPKTGGTALHEAARLGQVLGAKYLLTSGADVEKRDGQGHTPLLAA-----AAGVGSKCGDMVRELIAAGARVDTVEDKTRNSPLHVASDLGNNDVVERLLRGGADL 384
+G ++I K LLL +GA+V+ V + T LH AARLG V + L+ GAD+E ++ +G TPL+AA +A D+ R+L+ AGA R PLH A N+ VV LL GA++
Sbjct: 96 EGRLSITKRCARLLLSHGAVVNCVSEEEEDTPLHVAARLGLVEHVRLFLSYGADLEAKNAEGQTPLIAACTLAHSAQAADDYYDVCRQLVQAGAXXXXXX-XXRQRPLHQACKSANHRVVALLLARGANV 224
BLAST of mRNA_H-paniculata_contig350.9319.1 vs. uniprot
Match: A0A8J1UFM0_OWEFU (Ofus.G14921 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1UFM0_OWEFU) HSP 1 Score: 62.4 bits (150), Expect = 5.780e-8 Identity = 49/138 (35.51%), Postives = 72/138 (52.17%), Query Frame = 1
Query: 1 PLIRAVLKGHVNIVKLLL-RNGAMVDAVYPKTGG--TALHEAARLGQVLGAKYLLTSGADVEKRDGQGHTPLLAAAAGVGSKCGDMVRELIAAGARVDTVEDKTRNSPLHVASDLGNNDVVERLLRGGADLAGKNAVG 405
P+++AV KG + +K L+ + VD+ Y G + +H+A G KYLL+ GAD KRD G T L AA G ++ +L+ GA +D + +PL+VA G ++VE LL GAD+ KN G
Sbjct: 45 PILKAVQKGDLEKLKTLIEKENINVDSDYFLEGNWISPIHQAVICGHPNILKYLLSKGADPNKRDSSGTTALHHAAK-YGFDMEPVITDLLTHGAEIDAIGMHEGVTPLYVAYQGGYKEIVELLLSKGADINSKNGNG 181
BLAST of mRNA_H-paniculata_contig350.9319.1 vs. uniprot
Match: A0A2U1L9Z0_ARTAN (Ankyrin repeat family protein n=2 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1L9Z0_ARTAN) HSP 1 Score: 58.5 bits (140), Expect = 1.070e-6 Identity = 44/119 (36.97%), Postives = 60/119 (50.42%), Query Frame = 1
Query: 25 GHVNIVKLLLRNGAMVDAVYPKTGGTALHEAARLGQVLGAKYLLTSGADVEKRDGQGHTPLLAAAAGVGSKCGDMVRELIAAGARVDTVEDKTRNSPLHVASDLGNNDVVERLLRGGAD 381
GH+ +++LLL G VD GT L AA Q K LL AD G TPLL+ A C ++ LI AGA V+ +PLHVA+D+GN +++ RL++ AD
Sbjct: 133 GHIELMELLLSVGVDVDVDSQSDSGTPLVWAAGHAQQEAVKLLLKHKADPNIETDDGVTPLLSTVAAGSLPCLEL---LIEAGANVNITAGGA--TPLHVAADIGNTELITRLIKAKAD 246
BLAST of mRNA_H-paniculata_contig350.9319.1 vs. uniprot
Match: UPI001C718436 (ankyrin-3-like n=1 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=UPI001C718436) HSP 1 Score: 57.8 bits (138), Expect = 2.240e-6 Identity = 46/135 (34.07%), Postives = 63/135 (46.67%), Query Frame = 1
Query: 1 PLIRAVLKGHVNIVKLLLRNGAMVDAVYPKTGGTALHEAARLGQVLGAKYLLTSGADVEKRDGQGHTPLLAAAAGVGSKCGDMVRELIAAGARVDTVEDKTRNSPLHVASDLGNNDVVERLLRGGADLAGKNAVG 405
PL A KGH+ IVK+LLRNGA A G H A+R G+ ++ + G D + D G T L AA + D+V L+ GA + + T P+H AS G VV+ L G + N +G
Sbjct: 82 PLHYAAEKGHLEIVKILLRNGANASAETYYMGSKYCHIASRFGRRNILEFFFSEGGDANETDKNGWTLLHCAAL---NNDVDIVEYLVNNGANIHAKDINTGTKPIHTASKNGCEKVVDYFLLKGVGVDTINKLG 213
BLAST of mRNA_H-paniculata_contig350.9319.1 vs. uniprot
Match: W3X919_PESFW (Sec5 domain-containing protein n=1 Tax=Pestalotiopsis fici (strain W106-1 / CGMCC3.15140) TaxID=1229662 RepID=W3X919_PESFW) HSP 1 Score: 57.8 bits (138), Expect = 2.480e-6 Identity = 42/126 (33.33%), Postives = 70/126 (55.56%), Query Frame = 1
Query: 28 HVNIVKLLLRNGAMVDAVYPKTGGTALHEAARLGQVLGAKYLLTSGADVEKRDGQGHTPLLAAAAGVGSKCGDMVRELIAAGARVDT------VEDKT-RNSPLHVASDLGNNDVVERLLRGGADL 384
HV ++ LL GA + G T LH+AAR+G + G ++LL + ++E R+ G TPL+ A + + ++V+ L+ G+ V+ V D T SPL A ++GN D++++LL GA +
Sbjct: 265 HVGVLNHLLGRGADLHIQLLTDGDTLLHDAARMGNLKGVRFLLDNQLNIESRNKLGKTPLMRA---ISANQVEVVKLLLDRGSDVNARGELVKVSDFTVSTSPLTEAIEIGNLDILQQLLAKGATI 387
BLAST of mRNA_H-paniculata_contig350.9319.1 vs. uniprot
Match: UPI001C71B740 (uncharacterized protein LOC107454385 n=1 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=UPI001C71B740) HSP 1 Score: 57.4 bits (137), Expect = 3.390e-6 Identity = 44/126 (34.92%), Postives = 62/126 (49.21%), Query Frame = 1
Query: 1 PLIRAVLKGHVNIVKLLLRNGAMVDAVYPKTGGTALHEAARLGQVLGAKYLLTSGADVEKRDGQGHTPLLAAAAGVGSKCGDMVRELIAAGARVDTVEDKTRNSPLHVASDLGNNDVVERLLRGGA 378
PL A KGH+ IVK+L+RNGA A G H A+R G+ ++ + G D + D G T L AA + D+V L+ GA + + T P+H+AS+ G VV+ L GA
Sbjct: 1278 PLHYAAEKGHLEIVKILIRNGANASAGGGGIGSKYCHFASRFGRRNILEFFFSEGGDANETDEIGWTLLHYAAV---NNDVDIVEYLVDNGANIHAEQFATGMKPMHIASEYGCEKVVDYFLLKGA 1400
BLAST of mRNA_H-paniculata_contig350.9319.1 vs. uniprot
Match: A0A2K0UCP2_GIBNY (Uncharacterized protein n=1 Tax=Gibberella nygamai TaxID=42673 RepID=A0A2K0UCP2_GIBNY) HSP 1 Score: 57.0 bits (136), Expect = 4.550e-6 Identity = 49/127 (38.58%), Postives = 63/127 (49.61%), Query Frame = 1
Query: 1 PLIRAVLKGHVNIVKLLLRNGAMVDAVYPKTGGTALHEAARLGQVLGAKYLLTSGADVEKRDGQGHTPLLAAAAGVGSKCGDMVRE-----LIAAGARVDTVEDKTRNSPLHVASDLGNNDVVERLL 366
PL AV G +LLL+ A DA + G T LH A + LL GAD ++DG+G TPLLAA G + D VRE L+ AGAR D N+PLH A GN +++ +L
Sbjct: 1346 PLALAVELGQYKTAELLLQRKAAPDADLGEMG-TVLHLAVEMKGRDMVDLLLREGADPNRKDGKGRTPLLAALDGEIIEH-DPVREAIVEGLLNAGARPDEGNTDNTNAPLHAALQSGNPNIISTIL 1470
BLAST of mRNA_H-paniculata_contig350.9319.1 vs. uniprot
Match: A0A1I8JKX1_9PLAT (ANK_REP_REGION domain-containing protein n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8JKX1_9PLAT) HSP 1 Score: 56.6 bits (135), Expect = 5.610e-6 Identity = 44/124 (35.48%), Postives = 71/124 (57.26%), Query Frame = 1
Query: 4 LIRAVLKGHVNIVKLLLRNGAMVDAVYPKTGGTALHEAARLGQVLGAKYLLTSGADVEKRDGQGHTPLLAAAAGVGSKCGDMVRELIAAGARVDTVEDKTRNSPLHVASDLGNNDVVERLLRGG 375
LI AV +G++ +LRN ++G TAL A + G V +L+ +GA V+++D +G TPL AA+ S+C ++ EL AA A + NSP+H+A++ G+++V+ LL GG
Sbjct: 6 LIEAVKRGNLKDTCQILRNQRCGIDCADESGKTALQWATKYGHVTIVWHLIKAGAQVDRQDLKGWTPLHEAASFGRSQCACLLMELGAA-ANPNLRTAGEGNSPVHLAAEKGHSEVLRWLLSGG 128
BLAST of mRNA_H-paniculata_contig350.9319.1 vs. uniprot
Match: A0A1I8IM83_9PLAT (ANK_REP_REGION domain-containing protein n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8IM83_9PLAT) HSP 1 Score: 56.6 bits (135), Expect = 5.660e-6 Identity = 44/124 (35.48%), Postives = 71/124 (57.26%), Query Frame = 1
Query: 4 LIRAVLKGHVNIVKLLLRNGAMVDAVYPKTGGTALHEAARLGQVLGAKYLLTSGADVEKRDGQGHTPLLAAAAGVGSKCGDMVRELIAAGARVDTVEDKTRNSPLHVASDLGNNDVVERLLRGG 375
LI AV +G++ +LRN ++G TAL A + G V +L+ +GA V+++D +G TPL AA+ S+C ++ EL AA A + NSP+H+A++ G+++V+ LL GG
Sbjct: 10 LIEAVKRGNLKDTCQILRNQRCGIDCADESGKTALQWATKYGHVTIVWHLIKAGAQVDRQDLKGWTPLHEAASFGRSQCACLLMELGAA-ANPNLRTAGEGNSPVHLAAEKGHSEVLRWLLSGG 132 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig350.9319.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig350.9319.1 >prot_H-paniculata_contig350.9319.1 ID=prot_H-paniculata_contig350.9319.1|Name=mRNA_H-paniculata_contig350.9319.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=196bp PLIRAVLKGHVNIVKLLLRNGAMVDAVYPKTGGTALHEAARLGQVLGAKYback to top mRNA from alignment at H-paniculata_contig350:38015..38602- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig350.9319.1 ID=mRNA_H-paniculata_contig350.9319.1|Name=mRNA_H-paniculata_contig350.9319.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=588bp|location=Sequence derived from alignment at H-paniculata_contig350:38015..38602- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig350:38015..38602- >mRNA_H-paniculata_contig350.9319.1 ID=mRNA_H-paniculata_contig350.9319.1|Name=mRNA_H-paniculata_contig350.9319.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1176bp|location=Sequence derived from alignment at H-paniculata_contig350:38015..38602- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |