mRNA_H-paniculata_contig34988.9313.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig34988.9313.1
Unique NamemRNA_H-paniculata_contig34988.9313.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig34988.9313.1 vs. uniprot
Match: A0A6H5L142_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L142_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 5.550e-52
Identity = 121/322 (37.58%), Postives = 163/322 (50.62%), Query Frame = 1
Query:   13 CFQCNEPGHLKMNCPQRVCPICKGIGHGESSHGFTARLIEEDKPVPVD------------GCEEF----WVADSGATAHMTPSNELMFDYETCSNLFVTVANGETLPIEGYGKMLVWMKDRGDIHKFSLSRVAHVPGLDTNLFSLQIVVNQGLTVRL--KEE-------GAAIALPNGSDDLCRKIGKHAFLSANAVLAPGKMPINPNKIDVNLFLFHQSHGHLHEALLRETAKKQGLTLVGDLSECKGCSLARGLRKPISTSTNTRAVERLNRVFMDVSGPKSVESTGGIKYSFLIRDDFSRKIWIYFGRHKSDTTRIFEQ 903
            C  C   GH K  CP     +   +  G +S   TA  + E+  V  D            G E+     +VAD+GAT HM  +++    YE C    V VA GET PI GYG + V +  R       L RVAHVP LD NL SL  + + G   +   K E       G  +  P   +   +   +     A A +APG        +D+N F  H +HGH HE LLR TAK+QG TLVG+L EC  CS A+ L KPI   T TRAV++L RVF+D+SG   V+S GG  Y+ +++DD++R   +YF +H+SD    FE+
Sbjct:  165 CKTCKGYGHDKSKCPTEEAVLVVEVPAGRASADATALDVAEEALVVGDISGECHKVVGRGGVEQARRGRYVADTGATTHMFANSDGFVRYEECDRR-VRVAAGETFPIVGYGDVTVTLSSRDGTTDLLLKRVAHVPRLDYNLVSLTSLFDDGFETKTLNKHELELERGGGEVVYFPRCGNLYVQNGFRTHTERARAAIAPGNAKAPSTPVDINDF--HCAHGHSHEVLLRTTAKQQGTTLVGELRECLRCSAAKWLSKPIPNKTWTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHRSDAAEAFER 483          
BLAST of mRNA_H-paniculata_contig34988.9313.1 vs. uniprot
Match: A0A6H5L8P7_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8P7_9PHAE)

HSP 1 Score: 188 bits (477), Expect = 4.210e-50
Identity = 107/251 (42.63%), Postives = 145/251 (57.77%), Query Frame = 1
Query:  178 ADSGATAHMTPSNELMFDYETCSNLFVTVANGETLPIEGYGKMLVWMKDRGDIHKFSLSRVAHVPGLDTNLFSLQIVVNQGLTVR--------LKEEGAAIALPNGSDDLCRKIGKHAFLSANAVLAPGKMPINPNKIDVNLFLFHQSHGHLHEALLRETAKKQGLTLVGDLSECKGCSLARGLRKPISTSTNTRAVERLNRVFMDVSGPKSVESTGGIKYSFLIRDDFSRKIWIYFGRHKSDTTRIFEQF 906
            AD+GAT HM  +++    YE C    V VA GET PI GYG + V +  R       L RVAHVP LD NL SL  + + G   +        L+  G ++  P  S+   +   +     A A +APG        +D+N F  H +HGH HE LLR TAK+QG TLVG+L EC GCS A+GL KPI   T+TRAV++L RVF+D+SG   V+S GG  Y+ +++DD++R   +YF +HKSD    FE++
Sbjct:  191 ADTGATTHMFANSDGFVRYEECDRR-VRVAAGETFPIVGYGDVTVTLSSRDGTTDLLLKRVAHVPRLDYNLVSLTSLFDDGFETKTLNKYDLELERGGESVRFPRYSNLYVQNGFRTHTEHACAAIAPGNAKAPSTPVDINDF--HCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERY 438          
BLAST of mRNA_H-paniculata_contig34988.9313.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 2.890e-49
Identity = 108/254 (42.52%), Postives = 145/254 (57.09%), Query Frame = 1
Query:  172 WVADSGATAHMTPSNELMFDYETCSNLFVTVANGETLPIEGYGKMLVWMKDRGDIHKFSLSRVAHVPGLDTNLFSLQIVVNQGLTVRL--KEE-------GAAIALPNGSDDLCRKIGKHAFLSANAVLAPGKMPINPNKIDVNLFLFHQSHGHLHEALLRETAKKQGLTLVGDLSECKGCSLARGLRKPISTSTNTRAVERLNRVFMDVSGPKSVESTGGIKYSFLIRDDFSRKIWIYFGRHKSDTTRIFEQF 906
            +VAD+GAT HM  +++    YE C    V VA GET PI GYG + V +  R       L RVAHVP LD NL SL  + + G   +   K E       G  +  P   +   +   +     A A +APG        +D+N F  H +HGH HE LLR TAK+QG TLVG+L EC GCS A+GL KPI   T+TRAV++L RVF+D+SG   V+S GG  Y+ +++DD++R   +YF +HKSD    FE++
Sbjct:  369 YVADTGATTHMFANSDGFVRYEECDRR-VRVAAGETFPIVGYGDVTVTLSSRDGTTDLLLKRVAHVPRLDYNLVSLTSLFDDGFETKTLNKHELELERGGGEVVYFPRCGNLYVQNGFRTHTEHACAAIAPGNAKAPSTPVDINDF--HCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERY 619          
BLAST of mRNA_H-paniculata_contig34988.9313.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 2.910e-49
Identity = 108/254 (42.52%), Postives = 145/254 (57.09%), Query Frame = 1
Query:  172 WVADSGATAHMTPSNELMFDYETCSNLFVTVANGETLPIEGYGKMLVWMKDRGDIHKFSLSRVAHVPGLDTNLFSLQIVVNQGLTVRL--KEE-------GAAIALPNGSDDLCRKIGKHAFLSANAVLAPGKMPINPNKIDVNLFLFHQSHGHLHEALLRETAKKQGLTLVGDLSECKGCSLARGLRKPISTSTNTRAVERLNRVFMDVSGPKSVESTGGIKYSFLIRDDFSRKIWIYFGRHKSDTTRIFEQF 906
            +VAD+GAT HM  +++    YE C    V VA GET PI GYG + V +  R       L RVAHVP LD NL SL  + + G   +   K E       G  +  P   +   +   +     A A +APG        +D+N F  H +HGH HE LLR TAK+QG TLVG+L EC GCS A+GL KPI   T+TRAV++L RVF+D+SG   V+S GG  Y+ +++DD++R   +YF +HKSD    FE++
Sbjct:  382 YVADTGATTHMFANSDGFVRYEECDRR-VRVAAGETFPIVGYGDVTVTLSSRDGTTDLLLKRVAHVPRLDYNLVSLTSLFDDGFETKTLNKHELELERGGGEVVYFPRCGNLYVQNGFRTHTEHACAAIAPGNAKAPSTPVDINDF--HCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERY 632          
BLAST of mRNA_H-paniculata_contig34988.9313.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 2.930e-49
Identity = 108/254 (42.52%), Postives = 145/254 (57.09%), Query Frame = 1
Query:  172 WVADSGATAHMTPSNELMFDYETCSNLFVTVANGETLPIEGYGKMLVWMKDRGDIHKFSLSRVAHVPGLDTNLFSLQIVVNQGLTVRL--KEE-------GAAIALPNGSDDLCRKIGKHAFLSANAVLAPGKMPINPNKIDVNLFLFHQSHGHLHEALLRETAKKQGLTLVGDLSECKGCSLARGLRKPISTSTNTRAVERLNRVFMDVSGPKSVESTGGIKYSFLIRDDFSRKIWIYFGRHKSDTTRIFEQF 906
            +VAD+GAT HM  +++    YE C    V VA GET PI GYG + V +  R       L RVAHVP LD NL SL  + + G   +   K E       G  +  P   +   +   +     A A +APG        +D+N F  H +HGH HE LLR TAK+QG TLVG+L EC GCS A+GL KPI   T+TRAV++L RVF+D+SG   V+S GG  Y+ +++DD++R   +YF +HKSD    FE++
Sbjct:  525 YVADTGATTHMFANSDGFVRYEECDRR-VRVAAGETFPIVGYGDVTVTLSSRDGTTDLLLKRVAHVPRLDYNLVSLTSLFDDGFETKTLNKHELELERGGGEVVYFPRCGNLYVQNGFRTHTEHACAAIAPGNAKAPSTPVDINDF--HCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERY 775          
BLAST of mRNA_H-paniculata_contig34988.9313.1 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 4.560e-38
Identity = 111/324 (34.26%), Postives = 156/324 (48.15%), Query Frame = 1
Query:   13 CFQCNEPGHLKMNCPQRVCPICKGIGHGESSHGFTARLIEEDKP--------VPVDGCEEF------WVADSGATAHMTPSNELMFDYETCSNLFVTVANGETLPIEGYGKMLVWMKDRGDIHKFSLSRVAHVPGLDTNLFSLQIVVNQGLTVRLKEEGAAIALPNGSDDLCRKIGKHAFL-----------SANAVLAPGKMPINPNKIDVNLFLFHQSHGHLHEALLRETAKKQGLTLVGD-LSECKGCSLARGLRKPISTSTNTRAVERLNRVFMDVSGPKSVESTGGIKYSFLIRDDFSRKIWIYFGRHKSDTTRIFEQF 906
            C  C   GH K  CP     + + +   +S     A + E  +P        + + G EE       +VADSGAT  M  S +   +Y+ C N  V    GE L I GYG + V ++  G      + R AHVPG+D NL SL  +  +G T   K  G  +    G +    ++GK   L           +  A++ PG+        D+N F  H SHGH HE LLR TAK+QG+ L G  L  C GCS+A+G  K +   T+TRAV++L RVF+D+ G     S GG  Y+ +IR D +R   ++F + KS+     EQF
Sbjct:  493 CEHCLGWGHKKEKCPTEAAVLAEVVSDVDSVEN-QAYMAEATQPGECGRTVDLGLVGVEEQGQGVMRYVADSGATCSMFRSADGFKNYQEC-NRRVKGIGGEFLRILGYGDVTVVLQSEGQEVPVPIKRAAHVPGMDLNLISLTSLTEEGHTYAGKPGGLVLTTKAGKEVWFPQLGKLLSLWGYQTEPEVDTACAAIIVPGEAKA-ATPTDLNEF--HNSHGHAHERLLRLTAKQQGVELTGGPLLSCTGCSMAKGQVKAVQRFTDTRAVKKLFRVFIDLGGRMQFHSIGGRWYTLIIRCDATRWTRVFFLKRKSEAADALEQF 811          
BLAST of mRNA_H-paniculata_contig34988.9313.1 vs. uniprot
Match: A0A6H5KSX8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSX8_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 8.240e-34
Identity = 82/201 (40.80%), Postives = 108/201 (53.73%), Query Frame = 1
Query:  232 YETCSNLFVTVANGETLPIEGYGKMLVWMKDRGDIHKFSLSRVAHVPGLDTNLFSLQIVVNQGLTVRL---------KEEGAAIALPNGSDDLCRKIGKHAFLSANAVLAPGKMPINPNKIDVNLFLFHQSHGHLHEALLRETAKKQGLTLVGDLSECKGCSLARGLRKPISTSTNTRAVERLNRVFMDVSGPKSVESTGG 807
            Y+ C    V VA GET P+ GYG + V +  R  I    L  VA+V   D NL  L  + + G   +          KE G ++  P   +   +   +     A A +APG        +D+N F  H +HGH HE LLR TAK+QG TLVG+L EC GCS A+GL KPI   T+TRAV++L RVF+D+SG   V+S GG
Sbjct:   11 YQECDRR-VRVAAGETFPVVGYGDVTVTLSSRDGITDLILKWVAYVTRSDDNLVFLTSLFDDGFKTKTLDKHELELEKEVGESVYFPRCGNLYVQNGFRTHTEHACAAIAPGNAKAPSTPVDINDF--HCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGG 208          
BLAST of mRNA_H-paniculata_contig34988.9313.1 vs. uniprot
Match: A0A6H5JYF9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYF9_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 1.150e-32
Identity = 63/124 (50.81%), Postives = 87/124 (70.16%), Query Frame = 1
Query:  535 PGKMPINPNKIDVNLFLFHQSHGHLHEALLRETAKKQGLTLVGDLSECKGCSLARGLRKPISTSTNTRAVERLNRVFMDVSGPKSVESTGGIKYSFLIRDDFSRKIWIYFGRHKSDTTRIFEQF 906
            PG    +   +DVN F  +++HGH HE LLR TAK+QG TLVG+L EC GCS A+GL KPI   T+TRAV++L RVF+D+SG   V+S GG  Y+ +++DD++R   +YF +HKSD    FE++
Sbjct:   98 PGNAKASSTPVDVNDF--YRAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERY 219          
BLAST of mRNA_H-paniculata_contig34988.9313.1 vs. uniprot
Match: A0A6H5L060_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L060_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 1.010e-31
Identity = 66/130 (50.77%), Postives = 89/130 (68.46%), Query Frame = 1
Query:  517 ANAVLAPGKMPINPNKIDVNLFLFHQSHGHLHEALLRETAKKQGLTLVGDLSECKGCSLARGLRKPISTSTNTRAVERLNRVFMDVSGPKSVESTGGIKYSFLIRDDFSRKIWIYFGRHKSDTTRIFEQF 906
            A A +APG        +D+N F  H +HGH HE LLR TAK+QG TLVG+L EC GCS A+GL KPI   T+TRAV++L RVF+D+SG   V+S GG  Y+ +++DD++R   +YF +HKSD    FE++
Sbjct:  298 ACAAIAPGNAKAPSTPVDINDF--HCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERY 425          
BLAST of mRNA_H-paniculata_contig34988.9313.1 vs. uniprot
Match: A0A6H5JNW1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNW1_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 1.370e-31
Identity = 90/287 (31.36%), Postives = 137/287 (47.74%), Query Frame = 1
Query:   13 CFQCNEPGHLKMNCPQRV---CPICKGIGHGESSHGFTARLIEEDKPVPVDGCEEFWVADSGATAHMTPSNELMFDYETCSNLFVTVANGETLPIEGYGKMLVWMKDRGDIHKFSLSRVAHVPGLDTNLFSLQIVVNQGLTVRLKEEGAAIALPNGSDDLCRKIGKHAFLSANAVLAPGKMPINPNKIDVNLFLFHQSHGHLHEALLRETAKKQGLTLVGDLSECKGCSLARGLRKPISTSTNTRAVERLNRVFMDVSGPKSVESTGGIKYSFLIRDDFSRKIWIYF 864
            CF+C +  H   +C +     C  CKG GH +S       ++  + P              GA+A  T  +    D    + L V   +GE   + G          RG + +    R+  +     +    + +    L +  KEEG ++  P   +   +   +     A A +APG    +   +D+N F  H + GH  E LLR TAK+QG TLVG+L EC GCS A+GL KPI   T+TRAV++L RVF+D+SG   V+S GG  Y+ +++DD++R   +YF
Sbjct:  215 CFRCGKKAHQVADCTESKPVRCETCKGYGHDKSKCPTEEAVLVVEVPA------------GGASADATALDATALDVAEDA-LVVGDLSGECHKVVG----------RGGVEQARRGRLVSLTSPFDDGLKTKTLDKHDLKLE-KEEGKSVLFPRCGNLYVQNGFRTHTEHACAAIAPGNAKASSTPVDINDF--HCAQGHSREVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYF 475          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig34988.9313.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L142_9PHAE5.550e-5237.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L8P7_9PHAE4.210e-5042.63Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5JZQ8_9PHAE2.890e-4942.52Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE2.910e-4942.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE2.930e-4942.52Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5L175_9PHAE4.560e-3834.26Uncharacterized protein n=9 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSX8_9PHAE8.240e-3440.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYF9_9PHAE1.150e-3250.81Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5L060_9PHAE1.010e-3150.77Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JNW1_9PHAE1.370e-3131.36CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig34988contigH-paniculata_contig34988:128..1132 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score118.2
Seed ortholog evalue6.5e-24
Seed eggNOG ortholog67593.Physo138220
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3QGIS@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons3
Model size906
Cds size906
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig34988.9313.1prot_H-paniculata_contig34988.9313.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig34988 128..1132 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930079.391004-CDS-H-paniculata_contig34988:127..2501622930079.391004-CDS-H-paniculata_contig34988:127..250Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig34988 128..250 +
1691481138.1482775-CDS-H-paniculata_contig34988:127..2501691481138.1482775-CDS-H-paniculata_contig34988:127..250Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig34988 128..250 +
1622930079.405135-CDS-H-paniculata_contig34988:286..6761622930079.405135-CDS-H-paniculata_contig34988:286..676Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig34988 287..676 +
1691481138.1592236-CDS-H-paniculata_contig34988:286..6761691481138.1592236-CDS-H-paniculata_contig34988:286..676Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig34988 287..676 +
1622930079.4203281-CDS-H-paniculata_contig34988:739..11321622930079.4203281-CDS-H-paniculata_contig34988:739..1132Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig34988 740..1132 +
1691481138.1699493-CDS-H-paniculata_contig34988:739..11321691481138.1699493-CDS-H-paniculata_contig34988:739..1132Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig34988 740..1132 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig34988.9313.1

>prot_H-paniculata_contig34988.9313.1 ID=prot_H-paniculata_contig34988.9313.1|Name=mRNA_H-paniculata_contig34988.9313.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=302bp
ETRVCFQCNEPGHLKMNCPQRVCPICKGIGHGESSHGFTARLIEEDKPVP
VDGCEEFWVADSGATAHMTPSNELMFDYETCSNLFVTVANGETLPIEGYG
KMLVWMKDRGDIHKFSLSRVAHVPGLDTNLFSLQIVVNQGLTVRLKEEGA
AIALPNGSDDLCRKIGKHAFLSANAVLAPGKMPINPNKIDVNLFLFHQSH
GHLHEALLRETAKKQGLTLVGDLSECKGCSLARGLRKPISTSTNTRAVER
LNRVFMDVSGPKSVESTGGIKYSFLIRDDFSRKIWIYFGRHKSDTTRIFE
QF
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mRNA from alignment at H-paniculata_contig34988:128..1132+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig34988.9313.1 ID=mRNA_H-paniculata_contig34988.9313.1|Name=mRNA_H-paniculata_contig34988.9313.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1005bp|location=Sequence derived from alignment at H-paniculata_contig34988:128..1132+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAAACTCGTGTTTGTTTTCAATGTAATGAGCCAGGTCATCTGAAGATGAA TTGTCCTCAGCGCGTATGTCCGATCTGCAAAGGGATCGGTCATGGCGAGA GCAGTCACGGTTTCACGGCCAGAGTGGCAGGGCAGGGCTAATTTGCTTCG GTAATTGAGCTTATTGAAGAGGACAAGCCAGTACCAGTAGATGGTTGTGA GGAGTTTTGGGTGGCCGACAGTGGGGCTACGGCCCACATGACTCCATCTA ACGAATTAATGTTTGATTACGAAACCTGCAGTAATTTGTTTGTGACGGTG GCCAACGGCGAAACACTTCCGATTGAGGGATATGGTAAGATGTTGGTATG GATGAAGGATCGGGGCGATATACACAAATTCAGCTTGAGTCGTGTAGCGC ATGTTCCGGGCCTGGACACAAATTTGTTTTCCCTACAGATTGTAGTGAAC CAGGGACTTACTGTCCGTTTGAAGGAGGAGGGTGCAGCGATTGCACTACC TAATGGGAGCGATGATTTGTGCCGAAAGATCGGAAAACATGCCTTTTTGG TAGCGACTCGATTCCCGTCCCCACCTGCTATATCTTACATTCCTCGAGCT GGATCCGACGAGTCTGCGAATGCTGTGCTTGCCCCCGGAAAGATGCCCAT CAATCCCAACAAGATTGATGTGAACTTGTTTCTGTTTCACCAGTCCCACG GTCATCTACACGAGGCACTGCTACGTGAGACGGCCAAGAAGCAAGGATTG ACTCTTGTGGGTGACCTGTCAGAGTGTAAGGGGTGCTCTTTGGCCAGGGG ACTGCGCAAGCCCATTTCTACGTCAACAAACACGCGTGCAGTTGAGCGTT TGAATCGAGTTTTCATGGATGTGTCTGGTCCAAAGTCAGTGGAGAGTACT GGGGGAATTAAATATTCGTTTCTTATTCGAGATGACTTTTCGCGCAAAAT CTGGATTTATTTTGGTAGACACAAATCGGATACCACAAGAATTTTCGAGC AATTT
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Coding sequence (CDS) from alignment at H-paniculata_contig34988:128..1132+

>mRNA_H-paniculata_contig34988.9313.1 ID=mRNA_H-paniculata_contig34988.9313.1|Name=mRNA_H-paniculata_contig34988.9313.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1812bp|location=Sequence derived from alignment at H-paniculata_contig34988:128..1132+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAAACTCGTGTTTGTTTTCAATGTAATGAGCCAGGTCATCTGAAGATGAA
TTGTCCTCAGCGCGTATGTCCGATCTGCAAAGGGATCGGTCATGGCGAGA
GCAGTCACGGTTTCACGGCCAGAGAAACTCGTGTTTGTTTTCAATGTAAT
GAGCCAGGTCATCTGAAGATGAATTGTCCTCAGCGCGTATGTCCGATCTG
CAAAGGGATCGGTCATGGCGAGAGCAGTCACGGTTTCACGGCCAGACTTA
TTGAAGAGGACAAGCCAGTACCAGTAGATGGTTGTGAGGAGTTTTGGGTG
GCCGACAGTGGGGCTACGGCCCACATGACTCCATCTAACGAATTAATGTT
TGATTACGAAACCTGCAGTAATTTGTTTGTGACGGTGGCCAACGGCGAAA
CACTTCCGATTGAGGGATATGGTAAGATGTTGGTATGGATGAAGGATCGG
GGCGATATACACAAATTCAGCTTGAGTCGTGTAGCGCATGTTCCGGGCCT
GGACACAAATTTGTTTTCCCTACAGATTGTAGTGAACCAGGGACTTACTG
TCCGTTTGAAGGAGGAGGGTGCAGCGATTGCACTACCTAATGGGAGCGAT
GATTTGTGCCGAAAGATCGGAAAACATGCCTTTTTGCTTATTGAAGAGGA
CAAGCCAGTACCAGTAGATGGTTGTGAGGAGTTTTGGGTGGCCGACAGTG
GGGCTACGGCCCACATGACTCCATCTAACGAATTAATGTTTGATTACGAA
ACCTGCAGTAATTTGTTTGTGACGGTGGCCAACGGCGAAACACTTCCGAT
TGAGGGATATGGTAAGATGTTGGTATGGATGAAGGATCGGGGCGATATAC
ACAAATTCAGCTTGAGTCGTGTAGCGCATGTTCCGGGCCTGGACACAAAT
TTGTTTTCCCTACAGATTGTAGTGAACCAGGGACTTACTGTCCGTTTGAA
GGAGGAGGGTGCAGCGATTGCACTACCTAATGGGAGCGATGATTTGTGCC
GAAAGATCGGAAAACATGCCTTTTTGTCTGCGAATGCTGTGCTTGCCCCC
GGAAAGATGCCCATCAATCCCAACAAGATTGATGTGAACTTGTTTCTGTT
TCACCAGTCCCACGGTCATCTACACGAGGCACTGCTACGTGAGACGGCCA
AGAAGCAAGGATTGACTCTTGTGGGTGACCTGTCAGAGTGTAAGGGGTGC
TCTTTGGCCAGGGGACTGCGCAAGCCCATTTCTACGTCAACAAACACGCG
TGCAGTTGAGCGTTTGAATCGAGTTTTCATGGATGTGTCTGGTCCAAAGT
CAGTGGAGAGTACTGGGGGAATTAAATATTCGTTTCTTATTCGAGATGAC
TTTTCGCGCAAAATCTGGATTTATTTTGGTAGACACAAATCGGATACCAC
AAGAATTTTCGAGCAATTTTCTGCGAATGCTGTGCTTGCCCCCGGAAAGA
TGCCCATCAATCCCAACAAGATTGATGTGAACTTGTTTCTGTTTCACCAG
TCCCACGGTCATCTACACGAGGCACTGCTACGTGAGACGGCCAAGAAGCA
AGGATTGACTCTTGTGGGTGACCTGTCAGAGTGTAAGGGGTGCTCTTTGG
CCAGGGGACTGCGCAAGCCCATTTCTACGTCAACAAACACGCGTGCAGTT
GAGCGTTTGAATCGAGTTTTCATGGATGTGTCTGGTCCAAAGTCAGTGGA
GAGTACTGGGGGAATTAAATATTCGTTTCTTATTCGAGATGACTTTTCGC
GCAAAATCTGGATTTATTTTGGTAGACACAAATCGGATACCACAAGAATT
TTCGAGCAATTT
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