mRNA_H-paniculata_contig3494.9307.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3494.9307.1 vs. uniprot
Match: A0A6H5KE17_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE17_9PHAE) HSP 1 Score: 143 bits (361), Expect = 5.770e-38 Identity = 70/84 (83.33%), Postives = 76/84 (90.48%), Query Frame = 1
Query: 1 RLPLEMLECFYRVPLNVAAEELNVSLTMLKKLCRAYGVTRWPHRQVSSLDKTIARLESKVAARSDGGKDAPSLVRKLEQATKRR 252
RLPLE+LECFY VPLNVAA++LNVSLTMLKKLCRAYGV RWPHRQVSSLDKT ++LE K+ AR DGGKDAPSLVRKL QA KRR
Sbjct: 474 RLPLEVLECFYHVPLNVAAQQLNVSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSKLEDKIKARRDGGKDAPSLVRKLTQARKRR 557
BLAST of mRNA_H-paniculata_contig3494.9307.1 vs. uniprot
Match: D7FS12_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS12_ECTSI) HSP 1 Score: 142 bits (357), Expect = 1.880e-37 Identity = 69/84 (82.14%), Postives = 75/84 (89.29%), Query Frame = 1
Query: 1 RLPLEMLECFYRVPLNVAAEELNVSLTMLKKLCRAYGVTRWPHRQVSSLDKTIARLESKVAARSDGGKDAPSLVRKLEQATKRR 252
RLPLE+LECFY VPLNVAA++LNVSLTMLKKLCRAYGV RWPHRQVSSLDKT ++LE K+ R DGGKDAPSLVRKL QA KRR
Sbjct: 474 RLPLEVLECFYHVPLNVAAQQLNVSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSKLEDKIKTRRDGGKDAPSLVRKLTQARKRR 557
BLAST of mRNA_H-paniculata_contig3494.9307.1 vs. uniprot
Match: A0A835Z7T4_9STRA (RWP-RK domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7T4_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 4.150e-24 Identity = 44/65 (67.69%), Postives = 54/65 (83.08%), Query Frame = 1
Query: 1 RLPLEMLECFYRVPLNVAAEELNVSLTMLKKLCRAYGVTRWPHRQVSSLDKTIARLESKVAARSD 195
RLP+ +LE FY VPLN+AA EL+VSLTMLKKLCR YG+ RWPHRQVSSL+K++ +LE K+ SD
Sbjct: 12 RLPVSVLEEFYHVPLNIAARELSVSLTMLKKLCRQYGIKRWPHRQVSSLNKSLGKLEEKILGASD 76
BLAST of mRNA_H-paniculata_contig3494.9307.1 vs. uniprot
Match: D7FN15_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN15_ECTSI) HSP 1 Score: 74.3 bits (181), Expect = 3.500e-14 Identity = 34/84 (40.48%), Postives = 60/84 (71.43%), Query Frame = 1
Query: 1 RLPLEMLECFYRVPLNVAAEELNVSLTMLKKLCRAYGVTRWPHRQVSSLDKTIARLESKVAARSDGGKDAPSLVRKLEQATKRR 252
R+P+E++ ++ PL V+AE +++S+T LK+LCR +GV RWPHRQ+S L++T+ LE++ A + G ++ ++ +L Q +RR
Sbjct: 67 RIPVELMREYFNYPLRVSAEAMHISVTTLKRLCRRHGVKRWPHRQISGLNRTLGDLEAQHDA-ARGEEEIAAVEEELRQLHRRR 149
BLAST of mRNA_H-paniculata_contig3494.9307.1 vs. uniprot
Match: A0A835YW93_9STRA (RWP-RK domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW93_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 4.770e-14 Identity = 31/55 (56.36%), Postives = 41/55 (74.55%), Query Frame = 1
Query: 1 RLPLEMLECFYRVPLNVAAEELNVSLTMLKKLCRAYGVTRWPHRQVSSLDKTIAR 165
R+ L +LE Y +PL AA++L VS TMLKKLCR YG+ RWPHRQ+ S+DK + +
Sbjct: 11 RVSLAVLEGCYNIPLTAAAKKLKVSNTMLKKLCRRYGIQRWPHRQIRSIDKEMQK 65
BLAST of mRNA_H-paniculata_contig3494.9307.1 vs. uniprot
Match: A0A7S3YET5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YET5_HETAK) HSP 1 Score: 73.6 bits (179), Expect = 1.860e-13 Identity = 31/78 (39.74%), Postives = 53/78 (67.95%), Query Frame = 1
Query: 1 RLPLEMLECFYRVPLNVAAEELNVSLTMLKKLCRAYGVTRWPHRQVSSLDKTIARLESKVAARSDGGKDAPSLVRKLE 234
R+PL +LE Y +PL A+++ VSLTM+K++CR Y + RWPHRQ+ S+ KT+ +L+ ++ DA ++R+++
Sbjct: 252 RIPLHILESKYELPLKEVADQIGVSLTMMKQICRHYKIKRWPHRQMKSIMKTLHQLKDRLNMVDPNSSDAQEIMRQVQ 329
BLAST of mRNA_H-paniculata_contig3494.9307.1 vs. uniprot
Match: A0A835Z1M5_9STRA (Putative NIN-like transcription factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1M5_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 3.340e-13 Identity = 30/57 (52.63%), Postives = 43/57 (75.44%), Query Frame = 1
Query: 10 LEMLECFYRVPLNVAAEELNVSLTMLKKLCRAYGVTRWPHRQVSSLDKTIARLESKV 180
LE+L+ FY VPL A+EL +SLT+LKK+CR YG+ RWPHRQ+ S++K+ L ++
Sbjct: 16 LELLQSFYNVPLAELAKELGLSLTLLKKICRKYGIQRWPHRQIRSINKSAQELTERI 72
BLAST of mRNA_H-paniculata_contig3494.9307.1 vs. uniprot
Match: A0A835YTG3_9STRA (Putative NIN-like transcription factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTG3_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 4.400e-13 Identity = 30/60 (50.00%), Postives = 45/60 (75.00%), Query Frame = 1
Query: 1 RLPLEMLECFYRVPLNVAAEELNVSLTMLKKLCRAYGVTRWPHRQVSSLDKTIARLESKV 180
++ LE+L+ +Y VPL A+EL +SLT+LKK+CR +G+ RWPHRQ+ SL+KT L+ +
Sbjct: 10 QITLELLQSYYNVPLAELAKELGLSLTLLKKICRKFGIQRWPHRQIRSLNKTAQELKERA 69
BLAST of mRNA_H-paniculata_contig3494.9307.1 vs. uniprot
Match: A0A6H5KFL8_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFL8_9PHAE) HSP 1 Score: 72.4 bits (176), Expect = 5.630e-13 Identity = 33/84 (39.29%), Postives = 59/84 (70.24%), Query Frame = 1
Query: 1 RLPLEMLECFYRVPLNVAAEELNVSLTMLKKLCRAYGVTRWPHRQVSSLDKTIARLESKVAARSDGGKDAPSLVRKLEQATKRR 252
R+P+E++ ++ PL V+AE +++S+T LK+LCR +GV RWPHRQ+S L++ + LE++ A + G ++ ++ +L Q +RR
Sbjct: 68 RIPVELMREYFNYPLRVSAEAMHISVTTLKRLCRRHGVKRWPHRQISGLNRALGDLEAQHDA-ARGEEEIAAVEEELRQLHRRR 150
BLAST of mRNA_H-paniculata_contig3494.9307.1 vs. uniprot
Match: H6WBB7_VAULI (Putative NIN-like transcription factor n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBB7_VAULI) HSP 1 Score: 71.2 bits (173), Expect = 1.110e-12 Identity = 29/57 (50.88%), Postives = 43/57 (75.44%), Query Frame = 1
Query: 10 LEMLECFYRVPLNVAAEELNVSLTMLKKLCRAYGVTRWPHRQVSSLDKTIARLESKV 180
LE+L+ +Y VPL A+EL +SLT+LKK+CR +G+ RWPHRQ+ S++K I L ++
Sbjct: 16 LELLQSYYNVPLAELAKELGLSLTLLKKICRKFGIQRWPHRQIRSINKNIQDLNERI 72 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3494.9307.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3494.9307.1 >prot_H-paniculata_contig3494.9307.1 ID=prot_H-paniculata_contig3494.9307.1|Name=mRNA_H-paniculata_contig3494.9307.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=79bp MLECFYRVPLNVAAEELNVSLTMLKKLCRAYGVTRWPHRQVSSLDKTIARback to top mRNA from alignment at H-paniculata_contig3494:5291..5542- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3494.9307.1 ID=mRNA_H-paniculata_contig3494.9307.1|Name=mRNA_H-paniculata_contig3494.9307.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=252bp|location=Sequence derived from alignment at H-paniculata_contig3494:5291..5542- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3494:5291..5542- >mRNA_H-paniculata_contig3494.9307.1 ID=mRNA_H-paniculata_contig3494.9307.1|Name=mRNA_H-paniculata_contig3494.9307.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=474bp|location=Sequence derived from alignment at H-paniculata_contig3494:5291..5542- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |