mRNA_H-paniculata_contig34814.9286.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig34814.9286.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 109 bits (272), Expect = 2.550e-26 Identity = 63/131 (48.09%), Postives = 80/131 (61.07%), Query Frame = 1
Query: 10 GEE-KGSIKVQRKSHIPKVMFICAVSRPDPSRDLDSKIGIWRVCVMK-AQRT-------TARQERG----------------EEYSGDTTIDSEYYQEWYEHKLLPAIKEKMPWLELRGGGIVQQDGASPH 327
GE+ G +V +SH+PK+M I A +RPDP+ D D KIGIWR+CV++ AQR+ TA R EEY D TID+E+Y++WY LLPAIKEKMPWL + +VQQDGASPH
Sbjct: 176 GEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRV-VVQQDGASPH 305
BLAST of mRNA_H-paniculata_contig34814.9286.1 vs. uniprot
Match: A0A024TAS5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TAS5_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 1.900e-10 Identity = 39/101 (38.61%), Postives = 55/101 (54.46%), Query Frame = 1
Query: 34 VQRKSHIPKVMFICAVSRPDPSRDLDSKIGIWRVCVMKAQ-RTTARQERGEEYSGDTTIDSEYYQEWYEHKLLPAIKEKMPW-LELRGGGIV-QQDGASPH 327
+Q KSHI KVMF+CAV+RP D ++G W + A R++ + G E + + Y+ K++PAIK K W + + GG IV QQD A PH
Sbjct: 21 LQSKSHITKVMFLCAVARP--RNGWDGRLGCWEIVERAAAVRSSHNRPAGTEVVKSVVVTKDVYRRILVDKVVPAIKSKWKWPVGVDGGAIVLQQDNARPH 119
BLAST of mRNA_H-paniculata_contig34814.9286.1 vs. uniprot
Match: A0A024TJH6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TJH6_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 4.590e-10 Identity = 38/111 (34.23%), Postives = 58/111 (52.25%), Query Frame = 1
Query: 1 MLPGEEKGSIKVQRKSHIPKVMFICAVSRPDPSRDLDSKIGIWRVCVMKAQRTTARQERGEEYSGDTTI--DSEYYQEWYEHKLLPAIKEKMPWLELRGGGIVQQDGASPH 327
+L GEE + K I KVMF+CAV+RP +D KIG+W R ++R T I D+ Y+++ +K++PAIK +P + R ++Q D A+PH
Sbjct: 23 LLEGEEVPRRACKSKGFITKVMFLCAVARPQMDIGVDEKIGLWPFVSQSRARRSSRNRPAGSMVITTLINVDATTYRDYVLNKVVPAIKASLPCVSKRV--VLQHDNATPH 131
BLAST of mRNA_H-paniculata_contig34814.9286.1 vs. uniprot
Match: A0A484N8H9_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484N8H9_9ASTE) HSP 1 Score: 64.7 bits (156), Expect = 6.990e-10 Identity = 46/114 (40.35%), Postives = 60/114 (52.63%), Query Frame = 1
Query: 4 LPGEEKGSIKVQRKSHIPKVMFICAVSRPDPSRD----LDSKIGIWRVCV-MKAQRTTARQERGE-EYSGDTTIDSEYYQEWYEHKLLPAIKEKMPWLELRGGGIVQQDGASPH 327
LP E Q KSHIPK+MF+ AVSRP D D KIGI+ +A+R++ + G E T+I+ + ++ KLLPAIKEK W I+QQD A PH
Sbjct: 229 LPDEPDPYRTAQSKSHIPKIMFLAAVSRPRFGNDGAVVWDGKIGIFPFTYEAQAKRSSKNRPAGTLEVKATTSINRDEIKKMLLEKLLPAIKEK--WPGPTRDVIIQQDNAKPH 340
BLAST of mRNA_H-paniculata_contig34814.9286.1 vs. uniprot
Match: UPI0020091A08 (uncharacterized protein LOC125206097 n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI0020091A08) HSP 1 Score: 63.2 bits (152), Expect = 2.410e-9 Identity = 43/116 (37.07%), Postives = 63/116 (54.31%), Query Frame = 1
Query: 1 MLPGEEKGSIKVQRKSHIPKVMFICAVSRPDPSRD----LDSKIGIWRVC-VMKAQRTTARQERGE-EYSGDTTIDSEYYQEWYEHKLLPAIKEKMP-WLELRGGGIVQQDGASPH 327
+LP E++ + K +I KVMF+CAVSRP + D K+GI+ + AQR + ++RG E TT++ E + HK++PAIK K P W +QQD A+PH
Sbjct: 188 LLPDEDEPYRSCKSKRYITKVMFMCAVSRPQFDSEGQPTYDGKVGIFPFTEAVPAQRKSKNRDRGTLETKPITTLNKEVMRGCIIHKIIPAIKAKWPDWASKEI--YIQQDNATPH 301
BLAST of mRNA_H-paniculata_contig34814.9286.1 vs. uniprot
Match: A0A6G0X8U9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X8U9_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 2.440e-9 Identity = 42/116 (36.21%), Postives = 61/116 (52.59%), Query Frame = 1
Query: 1 MLPGEEKGSIKVQRKSHIPKVMFICAVSRPD----PSRDLDSKIGIWRVCVM-KAQRTTARQERGEEYSGDTTIDSEYYQEWYEHKLLPAIKEKMP--WLELRGGGIVQQDGASPH 327
++ GEE S + KSHIPK+MF+ AV RP S+ D K+GI+ + A+R++ Q +G T+ + Y + + +LPAI K P W L +QQDGA PH
Sbjct: 171 LVKGEELPSRTARHKSHIPKLMFLTAVGRPQYDHGTSQYFDGKLGIFPFVIHGTAKRSSRHQAKGAPVLIPQTVTRDIYVDALVNHVLPAILTKFPSRWKTL----YIQQDGARPH 282
BLAST of mRNA_H-paniculata_contig34814.9286.1 vs. uniprot
Match: UPI001C264D25 (uncharacterized protein LOC121774216 n=2 Tax=Salvia splendens TaxID=180675 RepID=UPI001C264D25) HSP 1 Score: 59.7 bits (143), Expect = 3.910e-8 Identity = 40/115 (34.78%), Postives = 61/115 (53.04%), Query Frame = 1
Query: 1 MLPGEEKGSIKVQRKSHIPKVMFICAVSRP----DPSRDLDSKIGIWRVC-VMKAQRTTARQERGE-EYSGDTTIDSEYYQEWYEHKLLPAIKEKMPWLELRGGGIVQQDGASPH 327
+LP E++ + K +I KVMF+CAVSRP + D K+GI+ V+ AQR + + RG E ++ ++ HK++PAIK K P + +QQD A+PH
Sbjct: 150 LLPDEDEPYRSCKSKRYITKVMFMCAVSRPQFDANGQATYDGKVGIFPFTEVLPAQRKSKNRARGTMETKAINSVTKAVMRDCLIHKIIPAIKAKWP-VGASKDIYIQQDNATPH 263
BLAST of mRNA_H-paniculata_contig34814.9286.1 vs. uniprot
Match: Q8W1P5_ZEADI (Transposase (Fragment) n=1 Tax=Zea diploperennis TaxID=4576 RepID=Q8W1P5_ZEADI) HSP 1 Score: 56.2 bits (134), Expect = 8.680e-8 Identity = 38/111 (34.23%), Postives = 60/111 (54.05%), Query Frame = 1
Query: 1 MLPGEEKGSIKVQRKSHIPKVMFICAVSRPDPSRDL---DSKIGIWRVCVM-KAQRTTARQERGE-EYSGDTTIDSEYYQEWYEHKLLPAIKEKMPWLELRGGGIVQQDGA 318
+LP E+ + K++IPK+MF+CA SRP + D KIG + + +A+R++ + G E T+I + +E+ K+LPAI+ K P EL +QQD A
Sbjct: 17 LLPDEDDPHRTCKSKNNIPKLMFLCATSRPRFENGVCTFDGKIGCFPLVTFERAKRSSVNRPAGTMEVKPITSIKRDVIREFLIEKVLPAIRAKWPRDELNKPIYIQQDNA 127
BLAST of mRNA_H-paniculata_contig34814.9286.1 vs. uniprot
Match: UPI001C27ABF3 (uncharacterized protein LOC121745765 n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C27ABF3) HSP 1 Score: 58.5 bits (140), Expect = 1.010e-7 Identity = 41/116 (35.34%), Postives = 61/116 (52.59%), Query Frame = 1
Query: 1 MLPGEEKGSIKVQRKSHIPKVMFICAVSRP----DPSRDLDSKIGIWRVC-VMKAQRTTARQERGE-EYSGDTTIDSEYYQEWYEHKLLPAIKEKMP-WLELRGGGIVQQDGASPH 327
+LP E++ + K +I KVMF+CAVSRP D D K+GI+ V+ AQR + + RG E ++ ++ +K++PAIK K P W +QQD A+PH
Sbjct: 187 LLPDEDEPYRSCKSKRYITKVMFMCAVSRPQFGMDGQATYDGKVGIFPFTEVLLAQRKSKNRARGTMETKSINSVTKAVMRDCLINKIIPAIKAKWPVWASK--DIYIQQDNATPH 300
BLAST of mRNA_H-paniculata_contig34814.9286.1 vs. uniprot
Match: A0A5D6XR23_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XR23_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 1.550e-7 Identity = 38/117 (32.48%), Postives = 62/117 (52.99%), Query Frame = 1
Query: 1 MLPGEEKGSIKVQRKSHIPKVMFICAVSRP--DPSR--DLDSKIGIWRVCV-MKAQRTTARQERGEEYSGDTTIDSEYYQEWYEHKLLPAIKEKMP-WLELRGGG--IVQQDGASPH 327
+ P E Q KSH+PK+MF+CA++RP DP+ D IGIW + A R+++ ++ G + + E Y+ +++PA+ K P W GG ++Q+D A+PH
Sbjct: 46 LTPTEPNPQRHAQHKSHLPKLMFLCAITRPRVDPATGASFDRGIGIWPFAEEIPAYRSSSNRQAGTLETKPLPANKETYKAMIMTEVVPAVVSKWPAW----GGRHIVLQRDNANPH 158 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig34814.9286.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig34814.9286.1 >prot_H-paniculata_contig34814.9286.1 ID=prot_H-paniculata_contig34814.9286.1|Name=mRNA_H-paniculata_contig34814.9286.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=109bp MLPGEEKGSIKVQRKSHIPKVMFICAVSRPDPSRDLDSKIGIWRVCVMKAback to top mRNA from alignment at H-paniculata_contig34814:612..938- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig34814.9286.1 ID=mRNA_H-paniculata_contig34814.9286.1|Name=mRNA_H-paniculata_contig34814.9286.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=327bp|location=Sequence derived from alignment at H-paniculata_contig34814:612..938- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig34814:612..938- >mRNA_H-paniculata_contig34814.9286.1 ID=mRNA_H-paniculata_contig34814.9286.1|Name=mRNA_H-paniculata_contig34814.9286.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=654bp|location=Sequence derived from alignment at H-paniculata_contig34814:612..938- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |