mRNA_H-paniculata_contig34805.9281.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig34805.9281.1 vs. uniprot
Match: D8LK00_ECTSI (DEK C-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK00_ECTSI) HSP 1 Score: 142 bits (359), Expect = 6.300e-37 Identity = 76/93 (81.72%), Postives = 83/93 (89.25%), Query Frame = 1
Query: 1 DLEGIVDTFSDDEGDKVAQDTFLNDEAAAGDRQALKDMVRRVREGFGDERSG-RSRGSAARGNLRLDELTAADRSSRKEARRLGLLNSDEEWS 276
DLEGIVDTFSDDEGDK AQDT++NDE AAGDR+ LK+MVRRVREGFG+ER G R RG ARGNLRLDELT AD+S+R EARRLGLLNSDEEWS
Sbjct: 1439 DLEGIVDTFSDDEGDKAAQDTYINDENAAGDRRELKEMVRRVREGFGEERGGGRGRGGNARGNLRLDELTRADKSTRGEARRLGLLNSDEEWS 1531
BLAST of mRNA_H-paniculata_contig34805.9281.1 vs. uniprot
Match: A0A6H5KTL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTL5_9PHAE) HSP 1 Score: 138 bits (348), Expect = 1.910e-35 Identity = 74/93 (79.57%), Postives = 82/93 (88.17%), Query Frame = 1
Query: 1 DLEGIVDTFSDDEGDKVAQDTFLNDEAAAGDRQALKDMVRRVREGFGDERSG-RSRGSAARGNLRLDELTAADRSSRKEARRLGLLNSDEEWS 276
DLEGIVDTFSDDEGDK AQD+++N+E AAGDR+ LK+MVRRVREGFGDER G R RG ARGNLRLDELT AD+S+R EA RLGLLNSDEEWS
Sbjct: 1505 DLEGIVDTFSDDEGDKAAQDSYINNENAAGDRRELKEMVRRVREGFGDERGGGRGRGGNARGNLRLDELTRADKSTRGEAARLGLLNSDEEWS 1597
BLAST of mRNA_H-paniculata_contig34805.9281.1 vs. uniprot
Match: A0A836CNL9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNL9_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 1.210e-16 Identity = 51/76 (67.11%), Postives = 57/76 (75.00%), Query Frame = 1
Query: 166 GSAARGNLRLDELTAADRSSRKEARRLGLLNSDEEWSDDEKGKG----EDDDLEELDEQQLGELLAKEQRARHMGL 381
G++ARG LRLD+LTAADRSSR+EARRLGLLN DEEWSDDE GK E D QQL ELL +EQR RH+GL
Sbjct: 5 GASARGALRLDQLTAADRSSRREARRLGLLNEDEEWSDDEGGKQGGQEEADXXXXXXXQQLAELLLREQRKRHLGL 80
BLAST of mRNA_H-paniculata_contig34805.9281.1 vs. uniprot
Match: W7U217_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U217_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 2.640e-16 Identity = 50/97 (51.55%), Postives = 66/97 (68.04%), Query Frame = 1
Query: 1 DLEGIVDTFSDDEGDKVAQDTFLNDEAAAGDRQALKDMVRRVREGFGDERSGRSRGSAARGNLRLDELTAADRSSRKEARRLGLLNSDEEWSDDEKG 291
D EGIVD S+ EGD A F + D++ L++++RRV+EGF R G + G ARG LRLD+L ADR SR+EA+RLGLLNSDEE S +++G
Sbjct: 1353 DFEGIVDEVSEGEGDDDAFHDFAAQKEVEADKEQLQEVMRRVKEGFDGRRGGINFG--ARGRLRLDQLVGADRKSRREAKRLGLLNSDEELSSEDEG 1447
BLAST of mRNA_H-paniculata_contig34805.9281.1 vs. uniprot
Match: A0A7R9ZSQ0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZSQ0_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 1.260e-13 Identity = 47/96 (48.96%), Postives = 63/96 (65.62%), Query Frame = 1
Query: 1 DLEGIVDTFSDDEGDKVAQDTFLNDEAAAGDRQALKDMVRRVREGFGDERSGRSRGSA--ARGNLRLDELTAADRSSRKEARRLGLLNSDEEWSDD 282
DLE IVD SDDEGD+ A + A +++ K+++RR+REG+ R G + G ARGNLR D+L AAD +R++A+RLGLLN DE SDD
Sbjct: 18 DLEHIVDELSDDEGDEEAGEDARKKIARMEEKRRHKEILRRMREGYDGRRGGIAGGGGMGARGNLRFDQLVAAD--NREDAKRLGLLNDDELDSDD 111
BLAST of mRNA_H-paniculata_contig34805.9281.1 vs. uniprot
Match: A0A485LKA6_9STRA (Aste57867_22418 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LKA6_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 2.000e-12 Identity = 50/95 (52.63%), Postives = 57/95 (60.00%), Query Frame = 1
Query: 1 DLEGIVDTFSDDEGDKVAQDTFLNDEAAAGDRQALKDMVRRVREGFGDERS--GRSRGSAARGNLRLDELTAADRSSRKEARRLGLLNSDEEWSD 279
DLE IVD SDDE DK A D + + A DR + +++R VREGFG R S ARG LDEL AAD S+KEA RLGLL SDEE D
Sbjct: 402 DLENIVDELSDDEKDKDA-DEYFRERMEAQDRDQVSEVMRNVREGFGRNRRIFSSSLNGEARGRFNLDELVAAD-GSKKEAARLGLLESDEEGGD 494
BLAST of mRNA_H-paniculata_contig34805.9281.1 vs. uniprot
Match: D0NX70_PHYIT (MRC1 domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NX70_PHYIT) HSP 1 Score: 72.4 bits (176), Expect = 2.720e-12 Identity = 52/101 (51.49%), Postives = 61/101 (60.40%), Query Frame = 1
Query: 1 DLEGIVDTFSDDE-GDKVAQDTFLNDEAAAGDRQALKDMVRRVREGFGDER---SGRSRGSAARGNLRLDELTAADRSSRKEARRLGLLNSDEEWSDDEKG 291
DL+ IVD SDDE + D E DRQ +K+++R V+EGFG R SG GS ARG LDEL AAD S+ EA RLGLL SDEE S+DE G
Sbjct: 315 DLDHIVDDLSDDERAQEQDLDEMFRREQEDQDRQQVKEVMRNVKEGFGRNRRAFSGLHSGSGARGRFNLDELVAAD-GSKFEAARLGLLESDEELSEDENG 414
BLAST of mRNA_H-paniculata_contig34805.9281.1 vs. uniprot
Match: A0A6G0XHK2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHK2_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 1.280e-11 Identity = 49/91 (53.85%), Postives = 55/91 (60.44%), Query Frame = 1
Query: 1 DLEGIVDTFSDDEGDKVAQDTFLNDEAAAGDRQALKDMVRRVREGFGDERS--GRSRGSAARGNLRLDELTAADRSSRKEARRLGLLNSDE 267
DLE IVD SDDE DK A D F + A DR + +++R VREGFG R S ARG LDEL AAD S+KEA RLGLL SDE
Sbjct: 367 DLENIVDELSDDEKDKDADDYF-RERMEAQDRDEVSEVMRNVREGFGRNRRIFSSSLNGEARGRFNLDELVAAD-GSKKEAARLGLLESDE 455
BLAST of mRNA_H-paniculata_contig34805.9281.1 vs. uniprot
Match: A0A329RLN9_9STRA (MRC1 domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RLN9_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 1.290e-11 Identity = 51/101 (50.50%), Postives = 61/101 (60.40%), Query Frame = 1
Query: 1 DLEGIVDTFSDDE-GDKVAQDTFLNDEAAAGDRQALKDMVRRVREGFGDER---SGRSRGSAARGNLRLDELTAADRSSRKEARRLGLLNSDEEWSDDEKG 291
DL+ IVD SD+E + D E DRQ +K+++R V+EGFG R SG GS ARG LDEL AAD S+ EA RLGLL SDEE S+DE G
Sbjct: 370 DLDHIVDDLSDEERAQEQDLDEMFRREQEDQDRQQVKEVMRNVKEGFGRNRRAFSGLHSGSGARGRFNLDELVAAD-GSKFEAARLGLLESDEEISEDESG 469
BLAST of mRNA_H-paniculata_contig34805.9281.1 vs. uniprot
Match: A0A8J5JCW2_9STRA (MRC1 domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5JCW2_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 1.340e-11 Identity = 51/101 (50.50%), Postives = 61/101 (60.40%), Query Frame = 1
Query: 1 DLEGIVDTFSDDE-GDKVAQDTFLNDEAAAGDRQALKDMVRRVREGFGDER---SGRSRGSAARGNLRLDELTAADRSSRKEARRLGLLNSDEEWSDDEKG 291
DL+ IVD SD+E + D E DRQ +K+++R V+EGFG R SG GS ARG LDEL AAD S+ EA RLGLL SDEE S+DE G
Sbjct: 373 DLDHIVDDLSDEERAQEQDLDEMFRREQEDQDRQQVKEVMRNVKEGFGRNRRAFSGLHSGSGARGRFNLDELVAAD-GSKFEAARLGLLESDEEISEDESG 472 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig34805.9281.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig34805.9281.1 >prot_H-paniculata_contig34805.9281.1 ID=prot_H-paniculata_contig34805.9281.1|Name=mRNA_H-paniculata_contig34805.9281.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=127bp DLEGIVDTFSDDEGDKVAQDTFLNDEAAAGDRQALKDMVRRVREGFGDERback to top mRNA from alignment at H-paniculata_contig34805:372..1346+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig34805.9281.1 ID=mRNA_H-paniculata_contig34805.9281.1|Name=mRNA_H-paniculata_contig34805.9281.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=975bp|location=Sequence derived from alignment at H-paniculata_contig34805:372..1346+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig34805:372..1346+ >mRNA_H-paniculata_contig34805.9281.1 ID=mRNA_H-paniculata_contig34805.9281.1|Name=mRNA_H-paniculata_contig34805.9281.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=762bp|location=Sequence derived from alignment at H-paniculata_contig34805:372..1346+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |