mRNA_H-paniculata_contig34740.9264.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig34740.9264.1 vs. uniprot
Match: A0A097IUD4_9PHAE (Phosphoenolpyruvate carboxylase n=5 Tax=Sargassum TaxID=3015 RepID=A0A097IUD4_9PHAE) HSP 1 Score: 172 bits (436), Expect = 2.130e-47 Identity = 80/101 (79.21%), Postives = 90/101 (89.11%), Query Frame = 1
Query: 70 QAYRSVVRQDPRFVPYFRTATPELELGSLNIGSRPAKRRPTGGVETLRAIPWVFSWAQQTRLNLPAWLGVGEALSSMASSQDGEGVLHEMYEKWPFFATNM 372
+AYR +VR+D RFVPYFRTATPELELGSLNIGSRPAKRRPTGGVETLRAIPWVFSW Q TRLNLPAWLGV +ALS +AS+ DG+ L MY++WPFFATN+
Sbjct: 731 EAYRDIVRRDERFVPYFRTATPELELGSLNIGSRPAKRRPTGGVETLRAIPWVFSWTQ-TRLNLPAWLGVADALSELASTDDGKATLRSMYDEWPFFATNI 830
BLAST of mRNA_H-paniculata_contig34740.9264.1 vs. uniprot
Match: A0A0A0V6T3_SACJA (Phosphoenolpyruvate carboxylase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A0A0V6T3_SACJA) HSP 1 Score: 168 bits (425), Expect = 6.660e-46 Identity = 80/107 (74.77%), Postives = 92/107 (85.98%), Query Frame = 1
Query: 52 LLAWRLQAYRSVVRQDPRFVPYFRTATPELELGSLNIGSRPAKRRPTGGVETLRAIPWVFSWAQQTRLNLPAWLGVGEALSSMASSQDGEGVLHEMYEKWPFFATNM 372
L A +AYR +VR+DPRFVPY RTATPELELG+LNIGSRPAKRRPTGGVE+LRAIPWVFSW Q TRLNLPAWLGVG+AL+ +AS+ +G+ L MYE WPFFATN+
Sbjct: 724 LSAVSCEAYRGIVRKDPRFVPYLRTATPELELGALNIGSRPAKRRPTGGVESLRAIPWVFSWTQ-TRLNLPAWLGVGDALADVASTAEGKADLRGMYEDWPFFATNI 829
BLAST of mRNA_H-paniculata_contig34740.9264.1 vs. uniprot
Match: A0A097IUC8_9PHAE (Phosphoenolpyruvate carboxylase n=2 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A097IUC8_9PHAE) HSP 1 Score: 167 bits (422), Expect = 1.700e-45 Identity = 77/101 (76.24%), Postives = 91/101 (90.10%), Query Frame = 1
Query: 70 QAYRSVVRQDPRFVPYFRTATPELELGSLNIGSRPAKRRPTGGVETLRAIPWVFSWAQQTRLNLPAWLGVGEALSSMASSQDGEGVLHEMYEKWPFFATNM 372
+AYR +VR+D RFVPYFRTATPELELG+LNIGSRPAKRRPTGGVE+LRAIPWVFSW Q TRLNLPAWLGVG+AL+++AS+ +G+ L MYE+WPFF TN+
Sbjct: 730 EAYREIVRKDARFVPYFRTATPELELGALNIGSRPAKRRPTGGVESLRAIPWVFSWTQ-TRLNLPAWLGVGDALAAVASTPEGKADLRNMYEQWPFFETNI 829
BLAST of mRNA_H-paniculata_contig34740.9264.1 vs. uniprot
Match: D8LTN1_ECTSI (Phosphoenolpyruvate carboxylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTN1_ECTSI) HSP 1 Score: 164 bits (414), Expect = 2.070e-44 Identity = 77/100 (77.00%), Postives = 88/100 (88.00%), Query Frame = 1
Query: 73 AYRSVVRQDPRFVPYFRTATPELELGSLNIGSRPAKRRPTGGVETLRAIPWVFSWAQQTRLNLPAWLGVGEALSSMASSQDGEGVLHEMYEKWPFFATNM 372
AYR +VR+DPRFVPYFRTATPELELG LNIGSRPAKRRPTGGVE+LRAIPWVFSW Q TRLNLPAWLGVG+AL+++AS+++G L MY WPFF TN+
Sbjct: 731 AYRDIVRKDPRFVPYFRTATPELELGGLNIGSRPAKRRPTGGVESLRAIPWVFSWTQ-TRLNLPAWLGVGDALAAVASTKEGVENLSTMYATWPFFKTNI 829
BLAST of mRNA_H-paniculata_contig34740.9264.1 vs. uniprot
Match: A0A4D9DCS6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DCS6_9STRA) HSP 1 Score: 145 bits (366), Expect = 2.630e-41 Identity = 72/99 (72.73%), Postives = 79/99 (79.80%), Query Frame = 1
Query: 76 YRSVVRQDPRFVPYFRTATPELELGSLNIGSRPAKRRPTGGVETLRAIPWVFSWAQQTRLNLPAWLGVGEALSSMASSQDGEGVLHEMYEKWPFFATNM 372
YR+ VRQDPRFVPYFR ATPE ELGS NIGSRP KRRP GGVETLRAIPWVFSW Q TRL+L AWLGVGEAL ++ +S + L EMY+ WPF TNM
Sbjct: 12 YRATVRQDPRFVPYFRAATPEQELGSANIGSRPQKRRP-GGVETLRAIPWVFSWTQ-TRLHLSAWLGVGEALEAVMASPEHASTLAEMYKHWPFLHTNM 108
BLAST of mRNA_H-paniculata_contig34740.9264.1 vs. uniprot
Match: A0A835YNR8_9STRA (Phosphoenolpyruvate carboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNR8_9STRA) HSP 1 Score: 152 bits (385), Expect = 1.700e-40 Identity = 72/99 (72.73%), Postives = 84/99 (84.85%), Query Frame = 1
Query: 76 YRSVVRQDPRFVPYFRTATPELELGSLNIGSRPAKRRPTGGVETLRAIPWVFSWAQQTRLNLPAWLGVGEALSSMASSQDGEGVLHEMYEKWPFFATNM 372
YR++VR DP+FV YFR +TPELELG+LNIGSRPAKRRPTGGVETLRAIPWVF+W Q TRLNLPAWLGVG+ALS++A + L EMY +WPFF TN+
Sbjct: 695 YRNIVRHDPKFVGYFRASTPELELGALNIGSRPAKRRPTGGVETLRAIPWVFAWTQ-TRLNLPAWLGVGDALSAVAKKD--KATLQEMYAQWPFFRTNI 790
BLAST of mRNA_H-paniculata_contig34740.9264.1 vs. uniprot
Match: A0A448ZPD7_9STRA (Phosphoenolpyruvate carboxylase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZPD7_9STRA) HSP 1 Score: 149 bits (377), Expect = 2.140e-39 Identity = 71/100 (71.00%), Postives = 82/100 (82.00%), Query Frame = 1
Query: 73 AYRSVVRQDPRFVPYFRTATPELELGSLNIGSRPAKRRPTGGVETLRAIPWVFSWAQQTRLNLPAWLGVGEALSSMASSQDGEGVLHEMYEKWPFFATNM 372
AYRS+V +DPRFVPYFR+ATPELEL +LNIGSRPAKR+PTGGVE+LRAIPW FSW Q TRLNLP WLGVGEA + +S DG+ L EMY +WP F T +
Sbjct: 771 AYRSIVSEDPRFVPYFRSATPELELSNLNIGSRPAKRKPTGGVESLRAIPWNFSWTQ-TRLNLPTWLGVGEAFEKILASDDGD-KLREMYREWPSFRTTV 868
BLAST of mRNA_H-paniculata_contig34740.9264.1 vs. uniprot
Match: A0A7S2YQX4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YQX4_9STRA) HSP 1 Score: 138 bits (347), Expect = 2.100e-38 Identity = 67/96 (69.79%), Postives = 78/96 (81.25%), Query Frame = 1
Query: 73 AYRSVVRQDPRFVPYFRTATPELELGSLNIGSRPAKRRPTGGVETLRAIPWVFSWAQQTRLNLPAWLGVGEALSSMASSQDGEGVLHEMYEKWPFF 360
+YRSVVR D RFVPYFR+ATPELEL +LNIGSRPAKR+ TGGVE+LRAIPW F+W Q TR NLP+WLGVG+ALS + S+D LH+MYE W F
Sbjct: 108 SYRSVVRGDERFVPYFRSATPELELSNLNIGSRPAKRKATGGVESLRAIPWNFAWTQ-TRSNLPSWLGVGDALSEVLESEDSA-TLHDMYENWGSF 201
BLAST of mRNA_H-paniculata_contig34740.9264.1 vs. uniprot
Match: W7TGA1_9STRA (Phosphoenolpyruvate carboxylase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TGA1_9STRA) HSP 1 Score: 145 bits (366), Expect = 6.370e-38 Identity = 72/99 (72.73%), Postives = 79/99 (79.80%), Query Frame = 1
Query: 76 YRSVVRQDPRFVPYFRTATPELELGSLNIGSRPAKRRPTGGVETLRAIPWVFSWAQQTRLNLPAWLGVGEALSSMASSQDGEGVLHEMYEKWPFFATNM 372
YR+ VRQDPRFVPYFR ATPE ELGS NIGSRP KRRP GGVETLRAIPWVFSW Q TRL+L AWLGVGEAL ++ +S + L EMY+ WPF TNM
Sbjct: 745 YRATVRQDPRFVPYFRAATPEQELGSANIGSRPQKRRP-GGVETLRAIPWVFSWTQ-TRLHLSAWLGVGEALEAVMASPEHASTLAEMYKHWPFLHTNM 841
BLAST of mRNA_H-paniculata_contig34740.9264.1 vs. uniprot
Match: A0A7S3H8Y1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H8Y1_9STRA) HSP 1 Score: 141 bits (356), Expect = 7.630e-38 Identity = 66/98 (67.35%), Postives = 77/98 (78.57%), Query Frame = 1
Query: 73 AYRSVVRQDPRFVPYFRTATPELELGSLNIGSRPAKRRPTGGVETLRAIPWVFSWAQQTRLNLPAWLGVGEALSSMASSQDGEGVLHEMYEKWPFFAT 366
AYR++VR+DPRFVPYFRT TPELEL LN+GSRP KR P GGVE+LRAIPWVF+W Q TRLNLP WLGVGEAL+ + +L EMY+ WP+F T
Sbjct: 213 AYRAIVREDPRFVPYFRTTTPELELAGLNVGSRPGKRNPKGGVESLRAIPWVFAWTQ-TRLNLPTWLGVGEALNKELKTDPA--LLKEMYQDWPWFRT 307 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig34740.9264.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig34740.9264.1 >prot_H-paniculata_contig34740.9264.1 ID=prot_H-paniculata_contig34740.9264.1|Name=mRNA_H-paniculata_contig34740.9264.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=125bp PPLSSTLTFTAVLCPTILLAWRLQAYRSVVRQDPRFVPYFRTATPELELGback to top mRNA from alignment at H-paniculata_contig34740:1096..2176+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig34740.9264.1 ID=mRNA_H-paniculata_contig34740.9264.1|Name=mRNA_H-paniculata_contig34740.9264.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1081bp|location=Sequence derived from alignment at H-paniculata_contig34740:1096..2176+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig34740:1096..2176+ >mRNA_H-paniculata_contig34740.9264.1 ID=mRNA_H-paniculata_contig34740.9264.1|Name=mRNA_H-paniculata_contig34740.9264.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=750bp|location=Sequence derived from alignment at H-paniculata_contig34740:1096..2176+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |