mRNA_H-paniculata_contig3471.9257.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3471.9257.1
Unique NamemRNA_H-paniculata_contig3471.9257.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig3471.9257.1 vs. uniprot
Match: A0A6H5JVS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS6_9PHAE)

HSP 1 Score: 315 bits (807), Expect = 2.580e-101
Identity = 159/373 (42.63%), Postives = 226/373 (60.59%), Query Frame = 1
Query:   16 VARPLARTGVGEEAGEMVHFDFLHIGESEV--ASAADTLDRYKYVLVIEDDLRGFVW*APAKVCTANFTVEQLVKLCAIFGAPSTWGSNNAAHFKNPVLRKTAAALGIRYHFSVADSAWTNGTVERMMREVLRVLQATLAEGGKPLEEWITVVPAVQWALNTAWRPSIGTTPFTVMIGREPRTGFAVLVEEADEGWLVKPLTPAQVEREMERIVEAQEKRWRNVLCRNIAARASSRERASRGELPHFSLGDFVLVARVQNPEPHAKLMSRWTGPWRVLTDYREHVYEVQHLVTGKTRYTHVVRKRFYADKELEVTRRMTKVFKYLEHQVQHHIESIGEVKKAEHSDECVVLVYWQGLDEEESTWELVSKVLAD 1128
            V RP   T  G+  GE++HFD+LH+G+S    A   D  D Y Y+LV+ DDL  F W  P   CTA  T + L+  C   G P  W S+ A HFKN V+     ALG+   F+VA+S W+NGT ERMMREV+R ++A L E  + L +W+ +VPAVQWALNTA+R    +TP+ VM GR PRT F+ L   + E W +  L   +++++++ +++ Q    + +  +    RA  R  ASRG+LP F++GD+V+VARV+      KL S WTGPWRV++  ++HVY VQ++V G+ R  HV R RFYAD EL VT  +  VF++   Q +H +ESI  +  A      +V V W G +E+E TW+ +S +  D
Sbjct:   24 VPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREVVRTMKAVLQERRRNLRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTLASSSGEAWNIDTLDATKLKQQVQNVIQTQAVLHKQIQQKVDHNRARQRAAASRGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIGPAHDGSGYLVRVRWAGFEEDEDTWQPLSDIYQD 396          
BLAST of mRNA_H-paniculata_contig3471.9257.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 314 bits (804), Expect = 8.690e-93
Identity = 158/373 (42.36%), Postives = 226/373 (60.59%), Query Frame = 1
Query:   16 VARPLARTGVGEEAGEMVHFDFLHIGESEV--ASAADTLDRYKYVLVIEDDLRGFVW*APAKVCTANFTVEQLVKLCAIFGAPSTWGSNNAAHFKNPVLRKTAAALGIRYHFSVADSAWTNGTVERMMREVLRVLQATLAEGGKPLEEWITVVPAVQWALNTAWRPSIGTTPFTVMIGREPRTGFAVLVEEADEGWLVKPLTPAQVEREMERIVEAQEKRWRNVLCRNIAARASSRERASRGELPHFSLGDFVLVARVQNPEPHAKLMSRWTGPWRVLTDYREHVYEVQHLVTGKTRYTHVVRKRFYADKELEVTRRMTKVFKYLEHQVQHHIESIGEVKKAEHSDECVVLVYWQGLDEEESTWELVSKVLAD 1128
            V RP   T  G+  GE++HFD+LH+G+S    A   D  D Y Y+LV+ DDL  F W  P   CTA  T + L+  C   G P  W S+ A HFKN V+     ALG+   F+VA+S W+NGT ERMMRE++R ++A L E  + + +W+ +VPAVQWALNTA+R    +TP+ VM GR PRT F+ L   + E W +  L   +++++++ +++ Q    + V  +    RA  R  ASRG+LP F++GD+V+VARV+      KL S WTGPWRV++  ++HVY VQ++V G+ R  HV R RFYAD EL VT  +  VF++   Q +H +ESI  +  A      +V V W G +E+E TW+ +S +  D
Sbjct: 1247 VPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREIVRTMKAVLQERRRNVRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTLASSSGEAWNIDTLDATKLKQQVQNVIQTQAVLHKQVQQKVDHNRARQRAAASRGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIGPAHDGSGYLVRVRWAGFEEDEDTWQPLSDIYQD 1619          
BLAST of mRNA_H-paniculata_contig3471.9257.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 263 bits (672), Expect = 4.700e-75
Identity = 148/370 (40.00%), Postives = 208/370 (56.22%), Query Frame = 1
Query:   16 VARPLARTGVGEEAGEMVHFDFLHIGESEVAS--AADTLDRYKYVLVIEDDLRGFVW*APAKVCTANFTVEQLVKLCAIFGAPSTWGSNNAAHFKNPVLRKTAAALGIRYHFSVADSAWTNGTVERMMREVLRVLQATLAEGGKPLEEWITVVPAVQWALNTAWRPSIGTTPFTVMIGREPRTGFAVLVEEADEGWLVKPLTPAQVEREMERIVEAQEKRWRNVLCRNIAARASSRERASRGELPHFSLGDFVLVARVQNPEPHAKLMSRWTGPWRVLTDYREHVYEVQHLVTGKTRYTHVVRKRFYADKELEVTRRMTKVFKYLEHQVQHHIESIGEVKKAEHSDECVVLVYWQGLDEEESTWELVSKV 1119
            V RPL  T  G   GE+VHFD+L++G S        D  + +KY+LV+ DD+  +VW  P   CTA  T + L+  C I G P  W S+ A+HFKN ++     ALG+  +FSVA+S W+NGT ERMMREV+R L+A + E      +W+ +VPAVQWALNTA+R   G+TP+ VM GR PRT  + L       W V  L    +  +++ +VEAQ    + VL +  A+R+  R  A  G LP F +GD+V+VA                         R HVY VQ++V+G+ R  HV R RFYAD  LE+T  + +VF++   Q +  + +I ++  AE      V V W G D+EE+TWE +SK+
Sbjct: 1349 VPRPLGETVHGTRPGEVVHFDYLYVGASGPLGDDGLDEEEGFKYILVMMDDMSNWVWLEPTGACTACLTAQHLLTWCKILGVPEVWVSDTASHFKNHMMAALETALGVDRNFSVANSPWSNGTCERMMREVVRTLKAMIQEERGRTRDWVDLVPAVQWALNTAFRERYGSTPYHVMFGRAPRTALSTLASSTGAEWKVDVLDEKSLRLKVQHVVEAQRHLHKEVLDKVQASRSKHRASARVGSLPDFVVGDYVIVAAE-----------------------RLHVYGVQNIVSGEVRDVHVARLRFYADAALEITAELKEVFQHAFTQGEFEMAAIVDMSVAEDGPGFDVEVEWVGFDKEENTWEELSKM 1695          
BLAST of mRNA_H-paniculata_contig3471.9257.1 vs. uniprot
Match: A0A6H5JCX8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCX8_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 1.890e-54
Identity = 92/217 (42.40%), Postives = 133/217 (61.29%), Query Frame = 1
Query:   16 VARPLARTGVGEEAGEMVHFDFLHIGESEV--ASAADTLDRYKYVLVIEDDLRGFVW*APAKVCTANFTVEQLVKLCAIFGAPSTWGSNNAAHFKNPVLRKTAAALGIRYHFSVADSAWTNGTVERMMREVLRVLQATLAEGGKPLEEWITVVPAVQWALNTAWRPSIGTTPFTVMIGREPRTGFAVLVEEADEGWLVKPLTPAQVEREMERIVEAQ 660
            V RP   T  G+  GE++HFD+LH+G+S    A   D  D Y Y+LV+ DDL  F W  P   CTA  T + L+  C   G P  W S+ A HFKN V+     ALG+   F+VA+S W+NGT ERMMRE++R ++A L E  + + +W+ +VPAVQWALNTA+R    +TP+ VM GR PRT F+ L   + E W +  L   +++++++ +++ Q
Sbjct:  471 VPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREIVRTMKAVLQERRRNVRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTLASSSGEAWNIDTLDATKLKQQVQNVIQTQ 687          
BLAST of mRNA_H-paniculata_contig3471.9257.1 vs. uniprot
Match: UPI001E1DBC25 (uncharacterized protein LOC123544734 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DBC25)

HSP 1 Score: 187 bits (475), Expect = 1.070e-51
Identity = 129/372 (34.68%), Postives = 186/372 (50.00%), Query Frame = 1
Query:   22 RPLARTGVGEEAGEMVHFDFLHIGESEVASAADTLDRYKYVLVIEDDLRGFVW*APAKVCTANFTVEQLVKLCAIFGAPSTWGSNNAAHFKNPVLRKTAAALGIRYHFSVADSAWTNGTVERMMREVLRVLQATLAEGGKPLEEWITVVPAVQWALNTAWRPSIGT-TPFTVMIGREPRTGFAVLVEEADEGWLVKPLTPAQVEREMERIVEAQEKRWRNVLCRNIAARASSRE-RASRGELPHFSLGDFVLVARVQNPEPHAKLMSRWTGPWRVLTDYREHVYEVQHLVTGKTRYTHVVRKRFYADKELEVTRRMTKVFKYLEHQVQ-HHIESIGEVKKAEHSDECVVLVYWQGLDEEESTWELVSKVLAD 1128
            RPL +        E++HFD+L++G S V         YKY+L+I+DDL G++W  PAK   +  TV+ L    A FG    W S+  +HFKN V+     AL  ++HF+ A S W NGTVER  REVLR  +A L+E       W TV   VQ  LN A  P  G   PFT   GR P +    LV    +  L  P    Q    +E +  + +             RA+SR+ +    +  +F +GDFVLVA+ ++     KL  RW GP+R+++     V+EV+ L+T K    H  R RFY D  LEVT    ++  ++ HQ Q + + S+  ++    S   +  V W G DE ++TWE +  +  D
Sbjct:   41 RPLGQALHASLPNEVIHFDYLYMGPSGVG--------YKYLLLIKDDLSGYLWLVPAKAADSASTVDALTLWFATFGVAHIWVSDQGSHFKNQVMGSLRKALRAQHHFTTAYSPWANGTVERACREVLRAGRALLSELKLHPTLWPTVARIVQSVLNNAPSPHRGNIAPFTAFTGRTPDSPIRSLVYTVADKSLSLPAIRTQQLINIENLRSSLDAIHHQAHEAATVRRANSRKHKYMSAQQANFDIGDFVLVAK-RDFSGGEKLSLRWRGPYRIVSTLSHFVFEVEDLLTKKVTPIHCARLRFYHDPSLEVT---AELLAHVAHQNQGYEVNSLLALRYDAESKHFIEHVSWLGFDETDNTWEPLLSLFED 400          
BLAST of mRNA_H-paniculata_contig3471.9257.1 vs. uniprot
Match: UPI001E1D317D (uncharacterized protein LOC123544435 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D317D)

HSP 1 Score: 179 bits (455), Expect = 5.040e-49
Identity = 123/374 (32.89%), Postives = 178/374 (47.59%), Query Frame = 1
Query:   61 EMVHFDFLHIGESEVASAADTLDRYKYVLVIEDDLRGFVW*APAKVCTANFTVEQLVKLCAIFGAPSTWGSNNAAHFKNPVLRKTAAALGIRYHFSVADSAWTNGTVERMMREVLRVLQATLAEGGKPLEEWITVVPAVQWALNTAWRPSIGTT-PFTVMIGREPRTGFAVLVEEADEGWLVKPLTPAQVEREMERIVEAQEKRWRNVLCRNI------------AARASSRERASRGELPHFSLGDFVLVARVQNPEPHAKLMSRWTGPWRVLTDYREHVYEVQHLVTGKTRYTHVVRKRFYADKELEVTRRMTKVFKYLEHQVQHH-----IESIGEVKKAEHSDECVVLVYWQGLDEEESTWELVSKVLAD 1128
            E++HFDFL +G +            KY+L+I+DDL G+VW  P+K       V+ L    A FG    W S+  +HFKN V+      L  ++HF+ A S W NGTVER  REVLR  +A L+E      EW  V   VQ  LN +     G T P T   GR   +    +V   +        T A  E E+++I+  QE      LC+++            A R ++R R    + P+F +GDFVLVAR +      KL  RW GP R++    +HVYEVQ +        H  R RFY D  L+V+  +         Q+ H+     + S+G+++    + E  V V+W G +  ++TWE V  +  D
Sbjct:   39 EVIHFDFLFMGPASTGE--------KYLLIIKDDLSGYVWLIPSKAADTATVVDALTLWFASFGVALIWVSDRGSHFKNKVMDGVRRVLKSQHHFTTAYSPWANGTVERACREVLRASRALLSEFRLRQTEWPAVYKIVQAILNNSPATHRGNTAPLTAFTGRSADSPLRCIVSPTNGE------TRALSEIELQQILNVQE------LCQSVEKIHKRESTSSEARRRAARARIDSAQAPNFEIGDFVLVAR-REQRTGEKLALRWRGPKRIVGTLSDHVYEVQDIEANTIAPVHATRLRFYNDASLDVSADLLA-------QIAHNNNGYDVHSLGDLRYEAETKEYSVQVFWLGFEPADATWEPVLSLQED 384          
BLAST of mRNA_H-paniculata_contig3471.9257.1 vs. uniprot
Match: V9G136_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica P1569 TaxID=1317065 RepID=V9G136_PHYPR)

HSP 1 Score: 181 bits (458), Expect = 7.050e-47
Identity = 125/375 (33.33%), Postives = 186/375 (49.60%), Query Frame = 1
Query:   22 RPLARTGVGEEAGEMVHFDFLHIGESEVASAADTLDRYKYVLVIEDDLRGFVW*APAKVCTANFTVEQLVKLCAIFGAPSTWGSNNAAHFKNPVLRKTAAALGIRYHFSVADSAWTNGTVERMMREVLRVLQATLAEGGKPLEEWITVVPAVQWALNTAWRPSIG-TTPFTVMIGREPRTGFAVLVEEADEGWLVKPLTPAQVEREMERIVEAQEKRWRNVLCRNIAARASSRERASRG-ELPHFSLGDFVLVARVQNPEPHAKLMSRWTGPWRVLTDYREHVYEVQHLVTGKTRYTHVVRKRFYADKELEVTRRMTKVFKYLEHQVQ----HHIESIGEVKKAEHSDECVVLVYWQGLDEEESTWELVSKVLAD 1128
            RPL      E+  E++H+D L +G +    A        +VLVI+D    +VW  P +  TA+ T E L++  A+FG    W S+   HFKN V+     ALG  +HF+ A   W NGTVE +MREVLR ++A L+E      +W  V+  VQ  LN +   S+G   PFT M      TG + +           PL P  +E   +R+           + R+ A R    +   RG ++  F++GDFVL A V +    +KL  +W GP RV+      V+ V++L+TG+T+ +H  R +FYAD  L +T        +L H  +    H +E + E +    S    +LV W+GL E E+TWE V  +L +
Sbjct:  516 RPLGEALHAEKPNELIHWDILTMGPATTGDA--------FVLVIKDHASHYVWLTPTRAATADLTFESLMEWFAVFGVCPAWVSDQDTHFKNAVIADLQRALGAHHHFTTARCPWANGTVEVVMREVLRSVRALLSEWRLAETDWPKVIKIVQLVLNQSVSDSLGGVAPFTAM------TGLSAM----------NPLDPVALEELHKRVA----------IGRSAAQRKGRAKALKRGAKMAQFAIGDFVLYADVWSHR-RSKLRVKWCGPARVVETSSNWVFTVENLLTGETKESHAARLKFYADSSLGITE------DFLAHVARNSEGHVVEKLLEARYDATSAMHQLLVKWRGLCELENTWEPVQNLLEE 849          
BLAST of mRNA_H-paniculata_contig3471.9257.1 vs. uniprot
Match: R7Q542_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q542_CHOCR)

HSP 1 Score: 157 bits (396), Expect = 1.110e-38
Identity = 124/393 (31.55%), Postives = 185/393 (47.07%), Query Frame = 1
Query:    1 QTRAAVARPLARTGVGEEAGEMVHFDFLHIGESEVASAADTLDRYKYVLVIEDDLRGFVW*APAKVCTANFTVEQLVKLCAIFGAPSTWGSNNAAHFKNPVLRKTAAALGIRYHFSVADSAWTNGTVERMMREVLRVLQATLAEGGKPLEEWITVVPAVQWALNTAW----------RPSIGTTPFTVMIGREP-RTGFAVLVEEADEGWLVKPLTPAQVEREMERIVEAQEKRWRNVLCRNIAARASSRERASRGELPH---FSLGDFVLVARVQNPEPHAKLMSRWTGPWRVLTDYREHVYEVQHLVTGKTRYTHVVRKRFYADKE--LEVTRRMTKVFKYLEHQVQHHIESIGEVKKAEHSDECVVLVYWQGL-DEEESTWELVSKVLAD 1128
            +T   V RPL     G+   E+VH DFL++G+         L   KY+L++ DDL  ++W  P +  TA    E L     +FG      S+  +HFKN +++     L  ++HF+ A S W NG++ERM REVLR  +A L+E     ++W  V  AVQ  +N A            P I  T   V  G +P R     L               A+    +  + EA E   + V     A+R    +R ++    H   F+ GDFV+V R Q P  H KL   W GP R+ +   + VYEV++L+TGK    H  R   Y ++    EVT  + K  ++ E   Q  +ES   ++ A  S +  V V W+GL D+E+ TWE ++++  D
Sbjct:  337 RTGEVVPRPLGHAIHGDRPNEVVHMDFLYMGQG--------LSNKKYLLILRDDLSSYIWLWPTEDTTAASAAEALCVWIGVFGCMEWMVSDQGSHFKNSLIKSLTDELRTKHHFTTAYSPWANGSIERMCREVLRSCRALLSEWRLGAKDWPAVTEAVQSVINHAPLRRLGLRNSDEPGIYRTLLEVFTGHKPLRPLIRALPMHKYRSARTSDEAQARTLVRIGHVQEALEGMHKKVKGLTSASRKRQVDRHNKRTNVHCARFAQGDFVVVRRAQ-PGSH-KLQFVWRGPRRISSIRSDWVYEVENLITGKKEVVHARRLHAYRERMNGKEVTPALIKAAEHSEQSYQ-IVESFRGIRDA--SGDLEVHVEWEGLPDKEDWTWEPLAQIFED 716          
BLAST of mRNA_H-paniculata_contig3471.9257.1 vs. uniprot
Match: A0A6A3JAA2_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3JAA2_9STRA)

HSP 1 Score: 153 bits (387), Expect = 1.600e-38
Identity = 112/372 (30.11%), Postives = 176/372 (47.31%), Query Frame = 1
Query:   16 VARPLARTGVGEEAGEMVHFDFLHIGESEVASAADTLDRYKYVLVIEDDLRGFVW*APAKVCTANFTVEQLVKLCAIFGAPSTWGSNNAAHFKNPVLRKTAAALGIRYHFSVADSAWTNGTVERMMREVLRVLQATLAEGGKPLEEWITVVPAVQWALN-TAWRPSIGTTPFTVMIGREPRTGFAVLVEEADEGWLVKPLTPAQVEREMERIVEAQEKRWRNVLCRNIAARASSRERASRGELPHFSLGDFVLVARVQNPEPHAKLMSRWTGPWRVLTDYREHVYEVQHLVTGKTRYTHVVRKRFYADKELEVTRRMTKVFKYLEHQVQHHIESIGEVKKAEHSDECVVLVYWQGLDEEESTWELVSKVLAD 1128
            + RP        E  E+VH+DFL +GE     A        Y+LV++D L  F    P          E L+   A +G P T  S+   HF+N ++R  A+ L +  +F+   S W NGTVER+ R+VL+VL+A L E      EW  ++PA+Q  LN TA +   G +P  V  G    +   V+V  A E    + +    +  ++E +  +  +  R V       R        +G   +F +GDFVL +R+    P+ KL+ +W GP++V+ +   H ++++HLVTG+    H  R +FYAD  L  T  + ++       V   +    E +  E  +   +LV W GL   E++WE    +L D
Sbjct:  110 IPRPYGPLLTPTERNEVVHWDFLSLGEGYGDPA--------YLLVVKDGLSHFCELFPCATSIVYVAAEALLMWAARYGIPKTLLSDQGTHFRNEMMRHMASRLKVEQNFTPVYSPWLNGTVERLNRDVLQVLRALLLEYALDYHEWPYLLPALQANLNHTAVQSLAGHSPVEVFAGLPASSALDVIVAPASETNGERVIEIGDLGDQLENLRASLHQMHREVTDAKERKRLQDMM-THKGTPVNFDVGDFVLWSRIDQRLPNNKLLGQWVGPFKVI-EALPHSFKIEHLVTGRVYEVHASRLKFYADSTLNTTDELLELASSQGMVV--GVSGFLEHRFNEEFERWELLVSWVGLQAIENSWEPWDTLLQD 469          
BLAST of mRNA_H-paniculata_contig3471.9257.1 vs. uniprot
Match: A0A225V0K3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V0K3_9STRA)

HSP 1 Score: 151 bits (381), Expect = 1.080e-37
Identity = 114/379 (30.08%), Postives = 179/379 (47.23%), Query Frame = 1
Query:   16 VARPLARTGVGEEAGEMVHFDFLHIGESEVASAADTLDRYKYVLVIEDDLRGFVW*APAKVCTANFTVEQLVKLCAIFGAPSTWGSNNAAHFKNPVLRKTAAALGIRYHFSVADSAWTNGTVERMMREVLRVLQATLAEGGKPLEEWITVVPAVQWALNTAWRPSIGTTPFTVMIGREPRTGFAVLVEEADEGWLVKPLTPAQVEREM-------ERIVEAQEKRWRNVLCRNIAARASSRERASRGELPHFSLGDFVLVARVQNPEPHAKLMSRWTGPWRVLTDYREHVYEVQHLVTGKTRYTHVVRKRFYADKELEVTRRMTKVFKYLEHQVQHHIESIGEVKKAEH---------SDECVVLVYWQGLDEEESTWE 1104
            V RP   T       EM+H+DFL++G        D+ D+ +Y+LV++D L  F         T++   + L+     FGAP    S+  +HFKN ++ +    L +  HF VA S W NG+VER+ R++L+V++  L E      EW+ ++P +Q  LN         TP + +  R P   F +L        +V P     +  ++       E + E+     + V+ R  A R  + +R S G   +F+ GDFVL +R+ +   + KL+ RW GP+ V T    H ++V+HLVT K    H  R +F+AD  L+VT  +             H+ + G V + E            E  +LV W GL  EE++WE
Sbjct:   99 VPRPWGPTYQATRRNEMLHYDFLYMG--------DSADQTQYILVLKDGLSHFCELVACDSPTSSIAAQALLDWSKRFGAPDMLMSDTGSHFKNLLVNELCQRLQVEQHFVVAYSPWINGSVERINRDILQVVRVMLMELQLNTREWVYLLPVIQANLNH--------TPVSSLNNRAPSELFTLLPVPNPLKSVVVPRPRKDIVLDVVSGLDNVESLRESLHSMHKEVVERKEARRRQN-QRNSSGTPCNFTEGDFVLWSRIDSRLSNNKLLVRWVGPFEV-TKALPHSFKVRHLVTNKIYNVHGSRLKFFADSSLDVTEELIA-----------HVGNQGMVLEIEEFKAHRFVKTRKEWQLLVSWDGLQAEENSWE 448          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3471.9257.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JVS6_9PHAE2.580e-10142.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7F6_9PHAE8.690e-9342.36Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5A5_9PHAE4.700e-7540.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCX8_9PHAE1.890e-5442.40Integrase catalytic domain-containing protein n=1 ... [more]
UPI001E1DBC251.070e-5134.68uncharacterized protein LOC123544734 n=1 Tax=Merce... [more]
UPI001E1D317D5.040e-4932.89uncharacterized protein LOC123544435 n=1 Tax=Merce... [more]
V9G136_PHYPR7.050e-4733.33Uncharacterized protein n=1 Tax=Phytophthora paras... [more]
R7Q542_CHOCR1.110e-3831.55Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A6A3JAA2_9STRA1.600e-3830.11Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A225V0K3_9STRA1.080e-3730.08Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3471contigH-paniculata_contig3471:7..1134 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score97.1
Seed ortholog evalue1.3e-17
Seed eggNOG ortholog4792.ETI57041
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3QEWS@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons1
Model size1128
Cds size741
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930071.191271-UTR-H-paniculata_contig3471:6..3931622930071.191271-UTR-H-paniculata_contig3471:6..393Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3471 7..393 +
1691481135.2758343-UTR-H-paniculata_contig3471:6..3931691481135.2758343-UTR-H-paniculata_contig3471:6..393Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3471 7..393 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930071.2064397-CDS-H-paniculata_contig3471:393..11341622930071.2064397-CDS-H-paniculata_contig3471:393..1134Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3471 394..1134 +
1691481135.2869074-CDS-H-paniculata_contig3471:393..11341691481135.2869074-CDS-H-paniculata_contig3471:393..1134Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3471 394..1134 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3471.9257.1prot_H-paniculata_contig3471.9257.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3471 394..1134 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3471.9257.1

>prot_H-paniculata_contig3471.9257.1 ID=prot_H-paniculata_contig3471.9257.1|Name=mRNA_H-paniculata_contig3471.9257.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=247bp
MMREVLRVLQATLAEGGKPLEEWITVVPAVQWALNTAWRPSIGTTPFTVM
IGREPRTGFAVLVEEADEGWLVKPLTPAQVEREMERIVEAQEKRWRNVLC
RNIAARASSRERASRGELPHFSLGDFVLVARVQNPEPHAKLMSRWTGPWR
VLTDYREHVYEVQHLVTGKTRYTHVVRKRFYADKELEVTRRMTKVFKYLE
HQVQHHIESIGEVKKAEHSDECVVLVYWQGLDEEESTWELVSKVLAD
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mRNA from alignment at H-paniculata_contig3471:7..1134+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3471.9257.1 ID=mRNA_H-paniculata_contig3471.9257.1|Name=mRNA_H-paniculata_contig3471.9257.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1128bp|location=Sequence derived from alignment at H-paniculata_contig3471:7..1134+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGACCAGAGCGGCAGTGGCGCGCCCGTTGGCCAGAACGGGGGTTGGCGA GGAGGCAGGAGAAATGGTCCACTTCGATTTCTTGCACATCGGAGAGAGCG AAGTTGCATCGGCGGCGGATACGCTGGACAGATACAAGTACGTCCTGGTA ATCGAGGATGACCTCCGCGGATTCGTGTGGTAGGCGCCAGCGAAGGTGTG TACTGCGAATTTTACGGTCGAACAGCTGGTGAAGCTGTGCGCGATTTTTG GTGCGCCAAGTACGTGGGGTAGCAACAATGCGGCGCATTTCAAGAACCCT GTGCTGCGGAAGACCGCGGCGGCGCTAGGGATTCGCTATCATTTCTCGGT CGCCGACTCCGCGTGGACGAATGGCACTGTCGAGCGGATGATGCGCGAAG TGCTTAGGGTGCTGCAAGCGACGTTGGCGGAGGGGGGCAAGCCGTTGGAG GAGTGGATTACGGTGGTGCCGGCGGTGCAATGGGCGCTCAACACGGCGTG GAGGCCAAGTATCGGTACTACGCCGTTCACGGTGATGATAGGTCGCGAGC CGCGGACAGGGTTTGCGGTTTTGGTAGAGGAAGCGGACGAAGGATGGCTG GTAAAACCGCTGACTCCCGCACAAGTGGAGCGTGAGATGGAGCGGATCGT GGAGGCGCAGGAGAAACGTTGGCGCAACGTTTTGTGCCGCAATATAGCCG CACGGGCGTCGAGTCGCGAGCGCGCAAGTCGCGGGGAGTTGCCGCATTTT TCCCTGGGCGATTTTGTGTTGGTGGCGCGCGTGCAAAACCCCGAGCCCCA CGCTAAGCTAATGAGCAGGTGGACAGGGCCGTGGCGGGTGTTGACGGATT ACAGAGAGCACGTGTACGAGGTTCAACACCTTGTCACGGGCAAAACGCGC TATACTCACGTGGTGCGCAAGCGATTTTACGCGGACAAAGAATTGGAGGT AACCCGTCGCATGACCAAGGTGTTCAAGTACCTCGAGCACCAAGTGCAAC ACCACATCGAGAGTATTGGAGAGGTGAAGAAAGCGGAGCATAGTGACGAG TGCGTGGTTCTTGTGTATTGGCAAGGGTTGGACGAAGAGGAGAGCACGTG GGAGCTGGTGTCGAAGGTGTTGGCGGAT
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Coding sequence (CDS) from alignment at H-paniculata_contig3471:7..1134+

>mRNA_H-paniculata_contig3471.9257.1 ID=mRNA_H-paniculata_contig3471.9257.1|Name=mRNA_H-paniculata_contig3471.9257.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1482bp|location=Sequence derived from alignment at H-paniculata_contig3471:7..1134+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATGCGCGAAGTGCTTAGGGTGCTGCAAGCGACGTTGGCGGAGGGGGG
CAAGCCGTTGGAGGAGTGGATTACGGTGGTGCCGGCGGTGCAATGGGCGC
TCAACACGGCGTGGAGGCCAAGTATCGGTACTACGCCGTTCACGGTGATG
ATAGGTCGCGAGCCGCGGACAGGGTTTGCGGTTTTGGTAGAGGAAGCGGA
CGAAGGATGGCTGGTAAAACCGCTGACTCCCGCACAAGTGGAGCGTGAGA
TGGAGCGGATCGTGGAGGCGCAGGAGAAACGTTGGCGCAACGTTTTGTGC
CGCAATATAGCCGCACGGGCGTCGAGTCGCGAGCGCGCAAGTCGCGGGGA
GTTGCCGCATTTTTCCCTGGGCGATTTTGTGTTGGTGGCGCGCGTGCAAA
ACCCCGAGCCCCACGCTAAGCTAATGAGCAGGTGGACAGGGCCGTGGCGG
GTGTTGACGGATTACAGAGAGCACGTGTACGAGGTTCAACACCTTGTCAC
GGGCAAAACGCGCTATACTCACGTGGTGCGCAAGCGATTTTACGCGGACA
AAGAATTGGAGGTAACCCGTCGCATGACCAAGGTGTTCAAGTACCTCGAG
CACCAAGTGCAACACCACATCGAGAGTATTGGAGAGGTGAAGAAAGCGGA
GCATAGTGACGAGTGCGTGGTTCTTGTGTATTGGCAAGGGTTGGACGAAG
AGGAGAGCACGTGGGAGCTGGTGTCGAAGGTGTTGGCGGATATGATGCGC
GAAGTGCTTAGGGTGCTGCAAGCGACGTTGGCGGAGGGGGGCAAGCCGTT
GGAGGAGTGGATTACGGTGGTGCCGGCGGTGCAATGGGCGCTCAACACGG
CGTGGAGGCCAAGTATCGGTACTACGCCGTTCACGGTGATGATAGGTCGC
GAGCCGCGGACAGGGTTTGCGGTTTTGGTAGAGGAAGCGGACGAAGGATG
GCTGGTAAAACCGCTGACTCCCGCACAAGTGGAGCGTGAGATGGAGCGGA
TCGTGGAGGCGCAGGAGAAACGTTGGCGCAACGTTTTGTGCCGCAATATA
GCCGCACGGGCGTCGAGTCGCGAGCGCGCAAGTCGCGGGGAGTTGCCGCA
TTTTTCCCTGGGCGATTTTGTGTTGGTGGCGCGCGTGCAAAACCCCGAGC
CCCACGCTAAGCTAATGAGCAGGTGGACAGGGCCGTGGCGGGTGTTGACG
GATTACAGAGAGCACGTGTACGAGGTTCAACACCTTGTCACGGGCAAAAC
GCGCTATACTCACGTGGTGCGCAAGCGATTTTACGCGGACAAAGAATTGG
AGGTAACCCGTCGCATGACCAAGGTGTTCAAGTACCTCGAGCACCAAGTG
CAACACCACATCGAGAGTATTGGAGAGGTGAAGAAAGCGGAGCATAGTGA
CGAGTGCGTGGTTCTTGTGTATTGGCAAGGGTTGGACGAAGAGGAGAGCA
CGTGGGAGCTGGTGTCGAAGGTGTTGGCGGAT
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