mRNA_H-paniculata_contig34681.9248.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig34681.9248.1 vs. uniprot
Match: A0A8F0F779_9PHAE (DNA-directed RNA polymerase subunit beta n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F779_9PHAE) HSP 1 Score: 1042 bits (2694), Expect = 0.000e+0 Identity = 521/583 (89.37%), Postives = 552/583 (94.68%), Query Frame = 1
Query: 1 DEFMLVDRSRGDFMAVSAFQVLSNRSSHIALLEHDDANRALMGSNMQRQAVPLLYPQKPIIGTGLESKIAADSRVVLINAFEGIVNFVSADRIIVLNNRSNGSSKIYFLDKYRRSNQETIINQKPLIWPGQLVKSGQILADGPGTDEGELSLGQNLRVAYMPWEGYNYEDAILISERLVSGDLFTSIHIEKYDLQISEANSTIDELTREIPNVELDGLMNLDINGIIKKGSFVKGGDILVGKITPTKESEELPESKLLRAVFNIKSPEPKDTSLRLPKSISGRVIEIQTASRAKGDNLSFGVEHWICISIAQIKKIRIGDKMSGRHGNKGVISKIIPREDMPFLPDGTLIDVILNPLGVPSRMNVGQIFECLLGFAGDYLNQRFKIVPFDEMYEPDASRMLINQTLEKASFQTNKMWLYNSSSPGKILLRDGRTGDIFDNPITVGKPYLLKLIHLVDKKMHARSTGTYSLITQQPLKGKAKNGGQRFGEMEVWALEAFGVAYTLQELLTVKSDDINGRNEVFNAIIKGHPIPKPGIPESFKVLLLELNALGLDITTNQLGKLENGEIDLYNVNLMSYIRSKLI 1749
DEFMLVD S +F+AVS Q+L+ SS I LEHDDANRALMGSNMQRQAVPLLYPQKPIIGTGLE KIAADSRVVLINAFEGIVNFVSADRII+LNN + GSSKIYFLDKYRRSNQETIINQKPLIWPGQ+VKSGQILADGP TDEGEL+LGQNLRVAYMPWEGYNYEDAILISERLVS DLFTSIHIEKYDLQISEANS IDELT +I +VE + L+NLD+NGII+KG+FVKGGDILVGKITP KESEELPESKLLRAVFNIKSP+PKDTSLR+P +SGRVIEIQTASRAKGDNLS GVEHW+C+SIAQIKKIRIGDKMSGRHGNKGVISKIIPREDMPFLPDGTLIDVILNPLGVPSRMNVGQIFECLLGFAGDYLN RFK++PFDEMYEPDASRMLINQTLEKAS QTNK WLY SSSPGKILL DGRTGDIFDNPITVGKPYLLKLIHLVDKK+HARSTG YSL+TQQPLKGKA+NGGQRFGEMEVWALEAFGVAYTLQELLTVKSDDINGR+EVFNAIIKGHPIPKPGIPESFKVLLLELNALGLDITTNQLGKLENGEID Y+VNLM+Y+RS+L+
Sbjct: 515 DEFMLVDASSVNFIAVSPIQILAIGSSLIPFLEHDDANRALMGSNMQRQAVPLLYPQKPIIGTGLEHKIAADSRVVLINAFEGIVNFVSADRIIILNNGNIGSSKIYFLDKYRRSNQETIINQKPLIWPGQIVKSGQILADGPATDEGELALGQNLRVAYMPWEGYNYEDAILISERLVSADLFTSIHIEKYDLQISEANSAIDELTNKIADVEPEVLVNLDVNGIIRKGTFVKGGDILVGKITPIKESEELPESKLLRAVFNIKSPDPKDTSLRVPHGVSGRVIEIQTASRAKGDNLSLGVEHWVCVSIAQIKKIRIGDKMSGRHGNKGVISKIIPREDMPFLPDGTLIDVILNPLGVPSRMNVGQIFECLLGFAGDYLNHRFKVIPFDEMYEPDASRMLINQTLEKASLQTNKTWLYTSSSPGKILLTDGRTGDIFDNPITVGKPYLLKLIHLVDKKIHARSTGPYSLVTQQPLKGKARNGGQRFGEMEVWALEAFGVAYTLQELLTVKSDDINGRHEVFNAIIKGHPIPKPGIPESFKVLLLELNALGLDITTNQLGKLENGEIDSYHVNLMAYVRSRLL 1097
BLAST of mRNA_H-paniculata_contig34681.9248.1 vs. uniprot
Match: A0A140G1K0_UNDPI (DNA-directed RNA polymerase subunit beta n=1 Tax=Undaria pinnatifida TaxID=74381 RepID=A0A140G1K0_UNDPI) HSP 1 Score: 928 bits (2399), Expect = 0.000e+0 Identity = 451/583 (77.36%), Postives = 526/583 (90.22%), Query Frame = 1
Query: 1 DEFMLVDRSRGDFMAVSAFQVLSNRSSHIALLEHDDANRALMGSNMQRQAVPLLYPQKPIIGTGLESKIAADSRVVLINAFEGIVNFVSADRIIVLNNRSNGSSKIYFLDKYRRSNQETIINQKPLIWPGQLVKSGQILADGPGTDEGELSLGQNLRVAYMPWEGYNYEDAILISERLVSGDLFTSIHIEKYDLQISEANSTIDELTREIPNVELDGLMNLDINGIIKKGSFVKGGDILVGKITPTKESEELPESKLLRAVFNIKSPEPKDTSLRLPKSISGRVIEIQTASRAKGDNLSFGVEHWICISIAQIKKIRIGDKMSGRHGNKGVISKIIPREDMPFLPDGTLIDVILNPLGVPSRMNVGQIFECLLGFAGDYLNQRFKIVPFDEMYEPDASRMLINQTLEKASFQTNKMWLYNSSSPGKILLRDGRTGDIFDNPITVGKPYLLKLIHLVDKKMHARSTGTYSLITQQPLKGKAKNGGQRFGEMEVWALEAFGVAYTLQELLTVKSDDINGRNEVFNAIIKGHPIPKPGIPESFKVLLLELNALGLDITTNQLGKLENGEIDLYNVNLMSYIRSKLI 1749
+EF++VD DF+AVS Q+++ +S I LEHDDANRALMGSNMQRQAVPLLYP+KPIIGTG+E +IAADS+VV+IN G+V+ VSADRII+L+N++ GSSK+YFLDKYRRSNQETIINQKPLIW G++VK GQI+ADGPGTD GEL+LGQNL VAYMPWEGYNYEDAIL+SERLV DLFTSIHIEKY+LQ+ + +++I+E+T IPN++ D + NLD NGIIKKG+FV GDILVGKITP E EELPESKLLRA+FNIKSPEP+DTSLR+P ISGRVIEIQTASR KGDNL+ GV W+CISIAQIKKIRIGDK+SGRHGNKGVISKIIP DMPFLPDGT++DVILNPLGVPSRMNVGQIFECLLGFAGDYLN+RFK+VPFDEMY P+ASR+LIN+TL+KA+ +TNK WL+N SSPGK+LL DGRTG+IFDN + VGKPY+LKLIHLVDKKMHARSTG+YSL+TQQPL GK+K+GGQRFGEMEVWALEAFGVAYTLQELLT+KSDDINGR+EVFNAIIKGHPIP+PG+PESFKVLL ELNALGLDITT+Q+GKL+NGE+ Y VNL++ ++SKL+
Sbjct: 320 NEFIIVDSVSVDFIAVSPIQIIAIGASLIPFLEHDDANRALMGSNMQRQAVPLLYPKKPIIGTGIEHQIAADSQVVIINLLNGVVDSVSADRIIILDNKNIGSSKVYFLDKYRRSNQETIINQKPLIWTGEIVKPGQIIADGPGTDGGELALGQNLTVAYMPWEGYNYEDAILVSERLVQEDLFTSIHIEKYELQLVDDSASIEEITTSIPNIDTDAICNLDTNGIIKKGTFVNPGDILVGKITPIVEDEELPESKLLRAIFNIKSPEPEDTSLRVPNGISGRVIEIQTASREKGDNLASGVYEWVCISIAQIKKIRIGDKISGRHGNKGVISKIIPIHDMPFLPDGTVVDVILNPLGVPSRMNVGQIFECLLGFAGDYLNRRFKVVPFDEMYRPNASRILINKTLKKAAKKTNKPWLFNKSSPGKVLLTDGRTGEIFDNSVLVGKPYILKLIHLVDKKMHARSTGSYSLVTQQPLGGKSKHGGQRFGEMEVWALEAFGVAYTLQELLTIKSDDINGRHEVFNAIIKGHPIPEPGVPESFKVLLRELNALGLDITTHQIGKLDNGEMASYKVNLLTLVKSKLL 902
BLAST of mRNA_H-paniculata_contig34681.9248.1 vs. uniprot
Match: A0A0R6M4L3_UNDPI (DNA-directed RNA polymerase subunit beta n=27 Tax=Laminariales TaxID=2886 RepID=A0A0R6M4L3_UNDPI) HSP 1 Score: 927 bits (2395), Expect = 0.000e+0 Identity = 450/583 (77.19%), Postives = 526/583 (90.22%), Query Frame = 1
Query: 1 DEFMLVDRSRGDFMAVSAFQVLSNRSSHIALLEHDDANRALMGSNMQRQAVPLLYPQKPIIGTGLESKIAADSRVVLINAFEGIVNFVSADRIIVLNNRSNGSSKIYFLDKYRRSNQETIINQKPLIWPGQLVKSGQILADGPGTDEGELSLGQNLRVAYMPWEGYNYEDAILISERLVSGDLFTSIHIEKYDLQISEANSTIDELTREIPNVELDGLMNLDINGIIKKGSFVKGGDILVGKITPTKESEELPESKLLRAVFNIKSPEPKDTSLRLPKSISGRVIEIQTASRAKGDNLSFGVEHWICISIAQIKKIRIGDKMSGRHGNKGVISKIIPREDMPFLPDGTLIDVILNPLGVPSRMNVGQIFECLLGFAGDYLNQRFKIVPFDEMYEPDASRMLINQTLEKASFQTNKMWLYNSSSPGKILLRDGRTGDIFDNPITVGKPYLLKLIHLVDKKMHARSTGTYSLITQQPLKGKAKNGGQRFGEMEVWALEAFGVAYTLQELLTVKSDDINGRNEVFNAIIKGHPIPKPGIPESFKVLLLELNALGLDITTNQLGKLENGEIDLYNVNLMSYIRSKLI 1749
+EF++VD DF+AVS Q+++ +S I LEHDDANRALMGSNMQRQAVPLLYP+KPIIGTG+E +IAADS+VV+IN G+V+ VSADRII+L+N++ GSSK++FLDKYRRSNQETIINQKPLIW G++VK GQI+ADGPGTD GEL+LGQNL VAYMPWEGYNYEDAIL+SERLV DLFTSIHIEKY+LQ+ + +++I+E+T IPN++ D + NLD NGIIKKG+FV GDILVGKITP E EELPESKLLRA+FNIKSPEP+DTSLR+P ISGRVIEIQTASR KGDNL+ GV W+CISIAQIKKIRIGDK+SGRHGNKGVISKIIP DMPFLPDGT++DVILNPLGVPSRMNVGQIFECLLGFAGDYLN+RFK+VPFDEMY P+ASR+LIN+TL+KA+ +TNK WL+N SSPGK+LL DGRTG+IFDN + VGKPY+LKLIHLVDKKMHARSTG+YSL+TQQPL GK+K+GGQRFGEMEVWALEAFGVAYTLQELLT+KSDDINGR+EVFNAIIKGHPIP+PG+PESFKVLL ELNALGLDITT+Q+GKL+NGE+ Y VNL++ ++SKL+
Sbjct: 545 NEFIIVDSVSVDFIAVSPIQIIAIGASLIPFLEHDDANRALMGSNMQRQAVPLLYPKKPIIGTGIEHQIAADSQVVIINLLNGVVDSVSADRIIILDNKNIGSSKVFFLDKYRRSNQETIINQKPLIWTGEIVKPGQIIADGPGTDGGELALGQNLTVAYMPWEGYNYEDAILVSERLVQEDLFTSIHIEKYELQLVDDSASIEEITTSIPNIDTDAICNLDTNGIIKKGTFVNPGDILVGKITPIVEDEELPESKLLRAIFNIKSPEPEDTSLRVPNGISGRVIEIQTASREKGDNLASGVYEWVCISIAQIKKIRIGDKISGRHGNKGVISKIIPIHDMPFLPDGTVVDVILNPLGVPSRMNVGQIFECLLGFAGDYLNRRFKVVPFDEMYRPNASRILINKTLKKAAKKTNKPWLFNKSSPGKVLLTDGRTGEIFDNSVLVGKPYILKLIHLVDKKMHARSTGSYSLVTQQPLGGKSKHGGQRFGEMEVWALEAFGVAYTLQELLTIKSDDINGRHEVFNAIIKGHPIPEPGVPESFKVLLRELNALGLDITTHQIGKLDNGEMASYKVNLLTLVKSKLL 1127
BLAST of mRNA_H-paniculata_contig34681.9248.1 vs. uniprot
Match: A0A8F0FB00_9PHAE (DNA-directed RNA polymerase subunit beta n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FB00_9PHAE) HSP 1 Score: 914 bits (2362), Expect = 0.000e+0 Identity = 446/582 (76.63%), Postives = 522/582 (89.69%), Query Frame = 1
Query: 4 EFMLVDRSRGDFMAVSAFQVLSNRSSHIALLEHDDANRALMGSNMQRQAVPLLYPQKPIIGTGLESKIAADSRVVLINAFEGIVNFVSADRIIVLNNRSNGSSKIYFLDKYRRSNQETIINQKPLIWPGQLVKSGQILADGPGTDEGELSLGQNLRVAYMPWEGYNYEDAILISERLVSGDLFTSIHIEKYDLQISEANSTIDELTREIPNVELDGLMNLDINGIIKKGSFVKGGDILVGKITPTKESEELPESKLLRAVFNIKSPEPKDTSLRLPKSISGRVIEIQTASRAKGDNLSFGVEHWICISIAQIKKIRIGDKMSGRHGNKGVISKIIPREDMPFLPDGTLIDVILNPLGVPSRMNVGQIFECLLGFAGDYLNQRFKIVPFDEMYEPDASRMLINQTLEKASFQTNKMWLYNSSSPGKILLRDGRTGDIFDNPITVGKPYLLKLIHLVDKKMHARSTGTYSLITQQPLKGKAKNGGQRFGEMEVWALEAFGVAYTLQELLTVKSDDINGRNEVFNAIIKGHPIPKPGIPESFKVLLLELNALGLDITTNQLGKLENGEIDLYNVNLMSYIRSKLI 1749
EF++VD + +F+AVS Q+++ +S I LEHDDANRALMGSNMQRQAVPLLYPQKPIIGTG+E +IAADS+VVLIN EGIV+ VSADRIIV +N++ GSSK+YFLDKYRRSNQETIINQK LIW G++VK GQI+ADGPGTD GEL+LGQNL VAYMPWEGYNYEDAIL+SE+LV DL TSIHIE+Y+LQI + N ++E+T +IP+ E++ L +LD NGI+KKGSFV GDIL+GKITP KE++ELPESKLLRA+FNIKSPEP+DTSLR+P ISGRVIEIQTASR KGD+L GV+ WICISIAQIKKIRIGDK+SGRHGNKGVISKIIP EDMPFLPDGT++DVILNPLGVPSRMNVGQ+FECLLGFAGDYLN+RFK++PFDEMY P+ASR+LIN+ L +AS +TNK WL+NSSSPGK++L DGRTG++FDN + VGKPY+LKLIHLVDKKMHARSTG YSL+TQQPL GK+++GGQRFGEMEVWALEAFGVAYTLQELLTVKSDDI+GR+EVFNAII+G PIPKPG+PESFKVLL ELN+LGLDITT Q+GKL+NGEI Y VNLM+ I+SKL+
Sbjct: 556 EFIIVDAASVNFIAVSPIQIIAAGASLIPFLEHDDANRALMGSNMQRQAVPLLYPQKPIIGTGIEHQIAADSQVVLINLLEGIVHSVSADRIIVFDNKNLGSSKVYFLDKYRRSNQETIINQKALIWAGEIVKPGQIIADGPGTDGGELALGQNLTVAYMPWEGYNYEDAILVSEKLVQEDLLTSIHIERYELQIIDNNIGLEEITAKIPHTEVEALAHLDENGIVKKGSFVNAGDILIGKITPIKEADELPESKLLRAIFNIKSPEPEDTSLRVPNGISGRVIEIQTASRDKGDSLPIGVDQWICISIAQIKKIRIGDKISGRHGNKGVISKIIPTEDMPFLPDGTIVDVILNPLGVPSRMNVGQLFECLLGFAGDYLNRRFKVLPFDEMYRPEASRILINKKLREASKKTNKSWLFNSSSPGKVMLTDGRTGELFDNSVMVGKPYILKLIHLVDKKMHARSTGPYSLVTQQPLGGKSRHGGQRFGEMEVWALEAFGVAYTLQELLTVKSDDISGRHEVFNAIIRGRPIPKPGVPESFKVLLRELNSLGLDITTYQIGKLDNGEIAPYKVNLMTLIKSKLL 1137
BLAST of mRNA_H-paniculata_contig34681.9248.1 vs. uniprot
Match: A0A6G6D7F3_ECTSI (DNA-directed RNA polymerase subunit beta n=9 Tax=Ectocarpales TaxID=2877 RepID=A0A6G6D7F3_ECTSI) HSP 1 Score: 897 bits (2318), Expect = 2.230e-316 Identity = 430/583 (73.76%), Postives = 519/583 (89.02%), Query Frame = 1
Query: 1 DEFMLVDRSRGDFMAVSAFQVLSNRSSHIALLEHDDANRALMGSNMQRQAVPLLYPQKPIIGTGLESKIAADSRVVLINAFEGIVNFVSADRIIVLNNRSNGSSKIYFLDKYRRSNQETIINQKPLIWPGQLVKSGQILADGPGTDEGELSLGQNLRVAYMPWEGYNYEDAILISERLVSGDLFTSIHIEKYDLQISEANSTIDELTREIPNVELDGLMNLDINGIIKKGSFVKGGDILVGKITPTKESEELPESKLLRAVFNIKSPEPKDTSLRLPKSISGRVIEIQTASRAKGDNLSFGVEHWICISIAQIKKIRIGDKMSGRHGNKGVISKIIPREDMPFLPDGTLIDVILNPLGVPSRMNVGQIFECLLGFAGDYLNQRFKIVPFDEMYEPDASRMLINQTLEKASFQTNKMWLYNSSSPGKILLRDGRTGDIFDNPITVGKPYLLKLIHLVDKKMHARSTGTYSLITQQPLKGKAKNGGQRFGEMEVWALEAFGVAYTLQELLTVKSDDINGRNEVFNAIIKGHPIPKPGIPESFKVLLLELNALGLDITTNQLGKLENGEIDLYNVNLMSYIRSKLI 1749
+EF+ VD +F+AVS Q+L+ +S I LEHDDANRALMGSNMQRQAVPLLYP+KPIIGTG+E +IAADS+VVLIN +GI++ V +DRI +++N+ GSSK+YFLDKYRRSNQETIINQKPLIW G++V+ GQI+ADGPGT+ GEL+LGQNL VAYMPW+GYN+EDAIL+S+RLV DLFTSIHIEKY+L++ + + TI+E+T IPN+E + ++NLD+NGIIKKG+FV GGDILVGKITP E +ELPESKLLRA+FNI+SPEP+D+SLR+P +SGRVIEIQTASR KGDNL G+ W+CISIAQIKKIRIGDK+SGRHGNKGVISKIIP +DMPFLPDGT++DVILNPLGVPSRMNVGQIFECLLGFAGDYLN+RFK++PFDEMY+P+ASR+LIN+ L+KA+ +T+K WL+N SPGK+LL DGRTGD+FDN + VGKPY+LKLIHLVDKKMHARSTG+YSL+TQQPL GK+K+GGQRFGEMEVWALEAFGVAYTLQELLT+KSDDINGR+EVF AIIKGH IP+PGIPESF VLL ELNALGLD+TT+++GKL NGEI Y VNL++ ++ K++
Sbjct: 557 NEFITVDAINVNFLAVSPIQILAVGASLIPFLEHDDANRALMGSNMQRQAVPLLYPKKPIIGTGIEHQIAADSQVVLINLIDGIIDSVCSDRITIIDNKHLGSSKMYFLDKYRRSNQETIINQKPLIWNGEIVEPGQIIADGPGTEGGELALGQNLTVAYMPWDGYNFEDAILVSDRLVQDDLFTSIHIEKYELELMDESDTIEEITTSIPNIEEEEIINLDMNGIIKKGTFVNGGDILVGKITPILEEDELPESKLLRAIFNIESPEPEDSSLRVPNGVSGRVIEIQTASREKGDNLGSGIYEWVCISIAQIKKIRIGDKLSGRHGNKGVISKIIPTDDMPFLPDGTIVDVILNPLGVPSRMNVGQIFECLLGFAGDYLNRRFKVIPFDEMYKPNASRILINKALKKAAKETDKGWLFNKFSPGKVLLTDGRTGDVFDNSVLVGKPYILKLIHLVDKKMHARSTGSYSLVTQQPLGGKSKHGGQRFGEMEVWALEAFGVAYTLQELLTIKSDDINGRHEVFTAIIKGHNIPEPGIPESFNVLLRELNALGLDMTTHEIGKLNNGEITSYKVNLLTLMKPKVV 1139
BLAST of mRNA_H-paniculata_contig34681.9248.1 vs. uniprot
Match: A0A8F0F9J7_9PHAE (DNA-directed RNA polymerase subunit beta n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9J7_9PHAE) HSP 1 Score: 897 bits (2319), Expect = 2.250e-316 Identity = 435/581 (74.87%), Postives = 516/581 (88.81%), Query Frame = 1
Query: 1 DEFMLVDRSRGDFMAVSAFQVLSNRSSHIALLEHDDANRALMGSNMQRQAVPLLYPQKPIIGTGLESKIAADSRVVLINAFEGIVNFVSADRIIVLNNRSNGSSKIYFLDKYRRSNQETIINQKPLIWPGQLVKSGQILADGPGTDEGELSLGQNLRVAYMPWEGYNYEDAILISERLVSGDLFTSIHIEKYDLQISEANSTIDELTREIPNVELDGLMNLDINGIIKKGSFVKGGDILVGKITPTKESEELPESKLLRAVFNIKSPEPKDTSLRLPKSISGRVIEIQTASRAKGDNLSFGVEHWICISIAQIKKIRIGDKMSGRHGNKGVISKIIPREDMPFLPDGTLIDVILNPLGVPSRMNVGQIFECLLGFAGDYLNQRFKIVPFDEMYEPDASRMLINQTLEKASFQTNKMWLYNSSSPGKILLRDGRTGDIFDNPITVGKPYLLKLIHLVDKKMHARSTGTYSLITQQPLKGKAKNGGQRFGEMEVWALEAFGVAYTLQELLTVKSDDINGRNEVFNAIIKGHPIPKPGIPESFKVLLLELNALGLDITTNQLGKLENGEIDLYNVNLMSYIRSK 1743
+EF++ + DF+A+S Q+L+ +S I LEH+DANRALMGSNMQRQAVPLLYP+KPIIGTGLE +IAADS++V+IN +GIV+ VS++RII+++N++ G+SKIYFLDKYRRSNQET+INQKP+IW G++VK GQI+ADGPGTD GEL+LGQNL VAYMPWEGYNYEDAILISERLV DLFTSIHIEKY+L++ + T++E+T +IPN+E D + NLD NGIIKKG+FV GDILVG+ITP E EELPESKLLRA+FNI+SPEP+DTSLR+P ISGRVIEIQTASR KGD+L+ GV W+CIS+AQIKKIRIGDK+SGRHGNKGVISKIIP +DMP+LPDG ++DVILNPLGVPSRMNVGQ+FECLLGFAGDYLN+RFK++PFDEMY PDASR+LIN+ L+KA+ +T K WL+N SSPGKILL DGRTG +FDN I VGK Y+LKLIHLVDKKMHARSTGTYSL+TQQPL GK+K+GGQRFGEMEVWALEAFGVAYTLQELLTVKSDDINGRNEVF+AII+G PIP+PGIPESFKVLL ELNALGLDITT+ LGKL+NGE+ VNL++ ++SK
Sbjct: 548 NEFIVTNADDVDFLAISPIQILAIGASLIPFLEHNDANRALMGSNMQRQAVPLLYPKKPIIGTGLEHQIAADSQIVVINLLDGIVDSVSSERIIIIDNKNFGNSKIYFLDKYRRSNQETVINQKPIIWTGEIVKPGQIIADGPGTDGGELALGQNLTVAYMPWEGYNYEDAILISERLVQEDLFTSIHIEKYELRLVYHSDTVEEITTQIPNIEADAIFNLDTNGIIKKGTFVNAGDILVGRITPIVEEEELPESKLLRAIFNIESPEPEDTSLRVPNGISGRVIEIQTASREKGDSLASGVYEWVCISLAQIKKIRIGDKLSGRHGNKGVISKIIPTQDMPYLPDGRIVDVILNPLGVPSRMNVGQLFECLLGFAGDYLNRRFKVIPFDEMYRPDASRILINKALKKAAKKTKKSWLFNKSSPGKILLTDGRTGQVFDNSILVGKSYILKLIHLVDKKMHARSTGTYSLVTQQPLGGKSKHGGQRFGEMEVWALEAFGVAYTLQELLTVKSDDINGRNEVFSAIIQGFPIPEPGIPESFKVLLRELNALGLDITTHHLGKLDNGEMVSSKVNLLALVKSK 1128
BLAST of mRNA_H-paniculata_contig34681.9248.1 vs. uniprot
Match: A0A141BSD1_9PHAE (DNA-directed RNA polymerase subunit beta n=16 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSD1_9PHAE) HSP 1 Score: 896 bits (2316), Expect = 2.260e-316 Identity = 435/583 (74.61%), Postives = 515/583 (88.34%), Query Frame = 1
Query: 1 DEFMLVDRSRGDFMAVSAFQVLSNRSSHIALLEHDDANRALMGSNMQRQAVPLLYPQKPIIGTGLESKIAADSRVVLINAFEGIVNFVSADRIIVLNNRSNGSSKIYFLDKYRRSNQETIINQKPLIWPGQLVKSGQILADGPGTDEGELSLGQNLRVAYMPWEGYNYEDAILISERLVSGDLFTSIHIEKYDLQISEANSTIDELTREIPNVELDGLMNLDINGIIKKGSFVKGGDILVGKITPTKESEELPESKLLRAVFNIKSPEPKDTSLRLPKSISGRVIEIQTASRAKGDNLSFGVEHWICISIAQIKKIRIGDKMSGRHGNKGVISKIIPREDMPFLPDGTLIDVILNPLGVPSRMNVGQIFECLLGFAGDYLNQRFKIVPFDEMYEPDASRMLINQTLEKASFQTNKMWLYNSSSPGKILLRDGRTGDIFDNPITVGKPYLLKLIHLVDKKMHARSTGTYSLITQQPLKGKAKNGGQRFGEMEVWALEAFGVAYTLQELLTVKSDDINGRNEVFNAIIKGHPIPKPGIPESFKVLLLELNALGLDITTNQLGKLENGEIDLYNVNLMSYIRSKLI 1749
+EF++V+ + DF+AVS Q+++ +S I LEH+DANRALMGSNMQRQAVPLLYP+KPIIGTG+E +IA DS VV+IN GIV+ VS+D+II+L+ + GSSKIYFLDKYRRSNQETIINQKPL+WPG++VK GQ +ADGPGTD GEL+LGQNL VAYMPWEGYNYEDAIL+SERL+ DLFTSIHIE+Y+LQ+ + + ++E+T+ +PN+E + + NLDINGIIKKG+FVKGGDILVGKITP E EELPESKLLRA+FNIKSPEP+DTSLR+PK ISGRVIE+QTASR KGDNL GV WI I IAQ KKI+IGDK+SGRHGNKGVISK+IP DMPFLPDGT IDVILNPLGVPSRMNVGQIFECLLGFAGDYLN RFK++PFDEMY +ASR+ IN+ L+ A+++TNK W++N S PGK++L+DGRTG+IF+NPI VGKPY+LKLIHLVDKKMHARSTG+YSLITQQPL GK+K+GGQRFGEMEVWALEAFGVAYTLQELLT+KSDDINGR+EVFNAII G PIP+PGIPESFKVLL ELNALGLDITT+QL K E+GEI +NVNL++ ++SKL+
Sbjct: 541 NEFIIVEGTNVDFIAVSPIQIIAAGASLIPFLEHNDANRALMGSNMQRQAVPLLYPKKPIIGTGIEHQIAIDSLVVIINLLNGIVDSVSSDQIIILDIENIGSSKIYFLDKYRRSNQETIINQKPLVWPGEIVKPGQTIADGPGTDGGELALGQNLMVAYMPWEGYNYEDAILVSERLLHHDLFTSIHIERYELQLMDNSMKVEEITKSVPNIETEAISNLDINGIIKKGTFVKGGDILVGKITPVMEEEELPESKLLRAIFNIKSPEPEDTSLRVPKGISGRVIEVQTASREKGDNLESGVYEWIGILIAQTKKIKIGDKLSGRHGNKGVISKLIPTYDMPFLPDGTTIDVILNPLGVPSRMNVGQIFECLLGFAGDYLNHRFKVLPFDEMYRKNASRIFINKALKSAAYKTNKSWIFNKSFPGKVILKDGRTGEIFNNPILVGKPYILKLIHLVDKKMHARSTGSYSLITQQPLGGKSKHGGQRFGEMEVWALEAFGVAYTLQELLTIKSDDINGRHEVFNAIINGRPIPEPGIPESFKVLLRELNALGLDITTHQLRKSESGEIKSFNVNLLTLLKSKLL 1123
BLAST of mRNA_H-paniculata_contig34681.9248.1 vs. uniprot
Match: A0A2R4QPV0_9PHAE (DNA-directed RNA polymerase subunit beta n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPV0_9PHAE) HSP 1 Score: 894 bits (2311), Expect = 1.580e-315 Identity = 434/583 (74.44%), Postives = 515/583 (88.34%), Query Frame = 1
Query: 1 DEFMLVDRSRGDFMAVSAFQVLSNRSSHIALLEHDDANRALMGSNMQRQAVPLLYPQKPIIGTGLESKIAADSRVVLINAFEGIVNFVSADRIIVLNNRSNGSSKIYFLDKYRRSNQETIINQKPLIWPGQLVKSGQILADGPGTDEGELSLGQNLRVAYMPWEGYNYEDAILISERLVSGDLFTSIHIEKYDLQISEANSTIDELTREIPNVELDGLMNLDINGIIKKGSFVKGGDILVGKITPTKESEELPESKLLRAVFNIKSPEPKDTSLRLPKSISGRVIEIQTASRAKGDNLSFGVEHWICISIAQIKKIRIGDKMSGRHGNKGVISKIIPREDMPFLPDGTLIDVILNPLGVPSRMNVGQIFECLLGFAGDYLNQRFKIVPFDEMYEPDASRMLINQTLEKASFQTNKMWLYNSSSPGKILLRDGRTGDIFDNPITVGKPYLLKLIHLVDKKMHARSTGTYSLITQQPLKGKAKNGGQRFGEMEVWALEAFGVAYTLQELLTVKSDDINGRNEVFNAIIKGHPIPKPGIPESFKVLLLELNALGLDITTNQLGKLENGEIDLYNVNLMSYIRSKLI 1749
+EF++V+ + DF+AVS Q+++ +S I LEHDDANRALMGSNMQRQAVPLLYP+KPIIGTG+E +IA+DS+VV+IN G VN+ S+D+II+L+N + G+SK+YFLDKYRRSNQETIINQKPLIW G++VK GQI+ADGPGTD GEL+LGQNL VAYMPWEGYNYEDAIL+SE+L+ DLFTSIHIE+Y+LQ+ + N+ I+E+T IP++E + NLD NGIIKKG+FVK GDILVGKITP E EELPESKLLRA+FNIKSPEP+DTSLR+P +SGRVIE+QTASR KGDNL GV W+CISIAQ KKI+IGDK+SGRHGNKGVISK+IP DMPFLPDGT+IDVILNPLGVPSRMNVGQIFECLLGFAGDYLNQRFK++PFDEMY +ASR+L+N+TL+KA+++TNK WL+N SSPGKI L DGRTG++F+NP+ VGKPY+LKLIHLVDKKMHARSTG+YSLITQQPL GK+K+GGQRFGEMEVWALEAFGVAYTLQELLT+KSDDINGR+EVFNAII G PIP+PG+PESFKVLL ELNALGLDITT+QL K + EI VNL++ I+SKL+
Sbjct: 541 NEFIVVNSTTVDFIAVSPIQIIAAGASLIPFLEHDDANRALMGSNMQRQAVPLLYPKKPIIGTGIEHQIASDSQVVIINLLNGTVNYASSDQIIILDNENVGNSKVYFLDKYRRSNQETIINQKPLIWAGEIVKPGQIIADGPGTDGGELALGQNLLVAYMPWEGYNYEDAILVSEKLIHNDLFTSIHIERYELQLMDNNTNIEEITITIPSIEAKAICNLDKNGIIKKGTFVKSGDILVGKITPIVEEEELPESKLLRAIFNIKSPEPEDTSLRVPNGVSGRVIEVQTASRDKGDNLESGVYEWVCISIAQTKKIKIGDKLSGRHGNKGVISKLIPTCDMPFLPDGTIIDVILNPLGVPSRMNVGQIFECLLGFAGDYLNQRFKVLPFDEMYRSNASRILVNKTLKKAAYKTNKTWLFNKSSPGKIPLIDGRTGELFNNPVLVGKPYILKLIHLVDKKMHARSTGSYSLITQQPLGGKSKHGGQRFGEMEVWALEAFGVAYTLQELLTIKSDDINGRHEVFNAIINGRPIPEPGVPESFKVLLRELNALGLDITTHQLRKSNSEEIKSSKVNLLTLIKSKLL 1123
BLAST of mRNA_H-paniculata_contig34681.9248.1 vs. uniprot
Match: A0A1I9LV95_9PHAE (DNA-directed RNA polymerase subunit beta n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LV95_9PHAE) HSP 1 Score: 879 bits (2272), Expect = 1.920e-309 Identity = 430/583 (73.76%), Postives = 511/583 (87.65%), Query Frame = 1
Query: 1 DEFMLVDRSRGDFMAVSAFQVLSNRSSHIALLEHDDANRALMGSNMQRQAVPLLYPQKPIIGTGLESKIAADSRVVLINAFEGIVNFVSADRIIVLNNRSNGSSKIYFLDKYRRSNQETIINQKPLIWPGQLVKSGQILADGPGTDEGELSLGQNLRVAYMPWEGYNYEDAILISERLVSGDLFTSIHIEKYDLQISEANSTIDELTREIPNVELDGLMNLDINGIIKKGSFVKGGDILVGKITPTKESEELPESKLLRAVFNIKSPEPKDTSLRLPKSISGRVIEIQTASRAKGDNLSFGVEHWICISIAQIKKIRIGDKMSGRHGNKGVISKIIPREDMPFLPDGTLIDVILNPLGVPSRMNVGQIFECLLGFAGDYLNQRFKIVPFDEMYEPDASRMLINQTLEKASFQTNKMWLYNSSSPGKILLRDGRTGDIFDNPITVGKPYLLKLIHLVDKKMHARSTGTYSLITQQPLKGKAKNGGQRFGEMEVWALEAFGVAYTLQELLTVKSDDINGRNEVFNAIIKGHPIPKPGIPESFKVLLLELNALGLDITTNQLGKLENGEIDLYNVNLMSYIRSKLI 1749
+EF+ V+ +F+AVS Q+L+ +S I LEHDDANRALMGSNMQRQAVPLLYP+KPIIGTG+E +IAADS+VVLIN +GI++ V ++RI +++N++ GSSKIYFLDKYRRSNQETIINQKPLIW G++V+ GQI+ADGPGT+ GEL+LGQNL VAYMPW+GYN+EDAIL+S+RLV DLFTSIHIEKYDLQ+ + + TIDE+T+ IPN+E + + NLDINGIIKKG+FV GGDILVGKITP E +ELPES+LLRA+FNI+SPEP+D+SLR+P ISGRVIEIQTASR KGDNL GV W+CISIAQIKKIRIGDK+SGRHGNKGVISKIIP DMPFLPDGT+IDVILNPLGVPSRMNVGQIFECLLGFAGDYLN+RF+++PFDEMY P+ASR+LIN+ L+KA+ QTNK WL+N SPGKILL DGR G+IFDN + VGKPY+LKLIHLVDKKMHARSTG+YSL+TQQPL GK+K+GGQRFGEMEVWALEAFGVAYTLQELLT+KSDDINGR+EVF AIIKG IP+P +PESF VLL ELNALGLD+TT+++ L+N EI Y VNL + I+ ++
Sbjct: 554 NEFITVEDINVNFLAVSPIQILAVGASLIPFLEHDDANRALMGSNMQRQAVPLLYPKKPIIGTGIEHQIAADSQVVLINLLDGIIDSVFSNRITIVDNQNLGSSKIYFLDKYRRSNQETIINQKPLIWNGEIVEPGQIIADGPGTEGGELALGQNLTVAYMPWDGYNFEDAILVSDRLVQDDLFTSIHIEKYDLQVLDDSDTIDEITKAIPNIEEEEIRNLDINGIIKKGTFVNGGDILVGKITPVLEEDELPESRLLRAIFNIESPEPEDSSLRVPNGISGRVIEIQTASREKGDNLGSGVYEWVCISIAQIKKIRIGDKLSGRHGNKGVISKIIPTYDMPFLPDGTIIDVILNPLGVPSRMNVGQIFECLLGFAGDYLNRRFRVLPFDEMYTPNASRILINKALKKAAQQTNKSWLFNKFSPGKILLTDGRNGNIFDNSVLVGKPYILKLIHLVDKKMHARSTGSYSLVTQQPLGGKSKHGGQRFGEMEVWALEAFGVAYTLQELLTLKSDDINGRHEVFTAIIKGQNIPEPCVPESFNVLLRELNALGLDMTTHEISNLDNLEITSYKVNLFNLIKPNVV 1136
BLAST of mRNA_H-paniculata_contig34681.9248.1 vs. uniprot
Match: A0A2I4Q2B1_9PHAE (DNA-directed RNA polymerase subunit beta n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2B1_9PHAE) HSP 1 Score: 835 bits (2158), Expect = 2.250e-292 Identity = 410/578 (70.93%), Postives = 488/578 (84.43%), Query Frame = 1
Query: 1 DEFMLVDRSRGDFMAVSAFQVLSNRSSHIALLEHDDANRALMGSNMQRQAVPLLYPQKPIIGTGLESKIAADSRVVLINAFEGIVNFVSADRIIVLNNRSNGSSKIYFLDKYRRSNQETIINQKPLIWPGQLVKSGQILADGPGTDEGELSLGQNLRVAYMPWEGYNYEDAILISERLVSGDLFTSIHIEKYDLQISEANSTIDELTREIPNVELDGLMNLDINGIIKKGSFVKGGDILVGKITPTKESEELPESKLLRAVFNIKSPEPKDTSLRLPKSISGRVIEIQTASRAKGDNLSFGVEHWICISIAQIKKIRIGDKMSGRHGNKGVISKIIPREDMPFLPDGTLIDVILNPLGVPSRMNVGQIFECLLGFAGDYLNQRFKIVPFDEMYEPDASRMLINQTLEKASFQTNKMWLYNSSSPGKILLRDGRTGDIFDNPITVGKPYLLKLIHLVDKKMHARSTGTYSLITQQPLKGKAKNGGQRFGEMEVWALEAFGVAYTLQELLTVKSDDINGRNEVFNAIIKGHPIPKPGIPESFKVLLLELNALGLDITTNQLGKLENGEIDLYNVNLMSYI 1734
+EF+L D +F+A+S Q+L+ +S I LEH+DANRALMGSNMQRQA+PLL QKPI+GTG+E +IA DS V ++N EG+V VSADRIIVL N N +K+YFLDK+RRSNQETIINQ+P++WPGQLVK+GQI+ADGP T+EGEL+LGQNLRVAY+PWEGYNYEDAI++SERL+ DLF+S+HIEKY+L + E N ++ELTR+IP V+ + L LD NG++KKG+FV+GGDILVGKITP SEELPESKLLRAVF I+SPEP DTSL++P +SGRVI+I ASR GD L GV ISIAQIKKI+IGDK+SGRHGNKGVISKI+P ED+PFLPDG IDV+LNPLGVPSRMNVGQIFECLLGFAGDYLNQR+K++PFDEMY +ASR+L+N+TL KAS T WL+N SSPGKILL DGRTG+ FDNPI VGKPYLLKL+HLVDKKMHARSTG YSL+TQQPLKGK+ NGGQRFGEMEVWAL+A+GVAYTLQELLT+KSDD+ GRNEV+ AI+KGHPIPKP IPESF+VLL ELN+LGLD+T QL KL N E+ ++NLMS +
Sbjct: 547 NEFILTDSFNVNFVAISPIQILAAGASLIPFLEHNDANRALMGSNMQRQALPLLQAQKPIVGTGIECQIALDSLVSVLNLEEGVVESVSADRIIVLTNNKNKPTKVYFLDKFRRSNQETIINQQPIVWPGQLVKAGQIIADGPATEEGELALGQNLRVAYLPWEGYNYEDAIIVSERLIHDDLFSSLHIEKYELYLMENNQGLEELTRDIPRVDEEILSKLDKNGLVKKGTFVRGGDILVGKITPIIASEELPESKLLRAVFEIESPEPDDTSLKVPNEVSGRVIDISIASRENGDTLETGVYQIFRISIAQIKKIKIGDKISGRHGNKGVISKIVPIEDLPFLPDGNTIDVLLNPLGVPSRMNVGQIFECLLGFAGDYLNQRYKVLPFDEMYCSEASRILVNKTLCKASKSTKNCWLFNPSSPGKILLTDGRTGENFDNPILVGKPYLLKLMHLVDKKMHARSTGPYSLVTQQPLKGKSNNGGQRFGEMEVWALQAYGVAYTLQELLTLKSDDMKGRNEVYKAIVKGHPIPKPRIPESFRVLLRELNSLGLDLTAYQLEKLNNSELGNVDINLMSLL 1124 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig34681.9248.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig34681.9248.1 >prot_H-paniculata_contig34681.9248.1 ID=prot_H-paniculata_contig34681.9248.1|Name=mRNA_H-paniculata_contig34681.9248.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=581bp MLVDRSRGDFMAVSAFQVLSNRSSHIALLEHDDANRALMGSNMQRQAVPLback to top mRNA from alignment at H-paniculata_contig34681:645..2396- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig34681.9248.1 ID=mRNA_H-paniculata_contig34681.9248.1|Name=mRNA_H-paniculata_contig34681.9248.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1752bp|location=Sequence derived from alignment at H-paniculata_contig34681:645..2396- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig34681:645..2396- >mRNA_H-paniculata_contig34681.9248.1 ID=mRNA_H-paniculata_contig34681.9248.1|Name=mRNA_H-paniculata_contig34681.9248.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3486bp|location=Sequence derived from alignment at H-paniculata_contig34681:645..2396- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |