mRNA_H-paniculata_contig3468.9247.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3468.9247.1 vs. uniprot
Match: A0A6H5JR26_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR26_9PHAE) HSP 1 Score: 154 bits (389), Expect = 1.550e-43 Identity = 76/146 (52.05%), Postives = 99/146 (67.81%), Query Frame = 1
Query: 10 KVIADKGQKTTGVKRSNSSENVTVVATINAAGAKMPPLFIYKGQRVQAAWVCN-RAPPGSWYAATDSSSMEGSVYLSVMKKFKELINNSGLNDGKPHALVLDGHASHVTIDMLKYDMEHNIHLFQLPSHSSHMTQPFDVCAFGLFK 444
+V+A++GQ RS S ENVT+V TINAAGA + P I+KGQR WV + PPG++Y T+SS M G V++ ++ F + + L DGKPH LVLDGHASHV++D++K + NIHL QLPSH SH+TQP DV FG FK
Sbjct: 120 RVVAERGQPVVAQMRSTSRENVTIVTTINAAGAVLAPTIIFKGQRFNGDWVADLNGPPGAYYDCTESSFMCGDVFIKYIQNFHKQLGERNLLDGKPHVLVLDGHASHVSLDVIKLAISLNIHLVQLPSHMSHITQPLDVAGFGCFK 265
BLAST of mRNA_H-paniculata_contig3468.9247.1 vs. uniprot
Match: A0A6H5K717_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K717_9PHAE) HSP 1 Score: 149 bits (377), Expect = 6.570e-43 Identity = 79/146 (54.11%), Postives = 100/146 (68.49%), Query Frame = 1
Query: 10 KVIADKGQKTTGVKRSNSSENVTVVATINAAGAKMPPLFIYKGQRVQAAWVCNR-APPGSWYAATDSSSMEGSVYLSVMKKFKELINNSGLNDGKPHALVLDGHASHVTIDMLKYDMEHNIHLFQLPSHSSHMTQPFDVCAFGLFK 444
KVIA+ GQK G RSNS ENVTVV TI+ AGA + P IYKGQR+QA WV R PP + A TDSS M+G +++ ++ F + + L +G PH L LDGHASHVT +++K E NI L+Q+PSHSSH+ QP DV +FG FK
Sbjct: 2 KVIAESGQKVVGAMRSNSRENVTVVVTISTAGATLAPWIIYKGQRLQADWVEGRNGPPNARLAVTDSSFMQGIAFVNYVRDFHRQLLDRDLINGTPHVLALDGHASHVTYEVVKLARELNIVLYQIPSHSSHVVQPLDVGSFGSFK 147
BLAST of mRNA_H-paniculata_contig3468.9247.1 vs. uniprot
Match: A0A6H5JYX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYX7_9PHAE) HSP 1 Score: 155 bits (391), Expect = 3.940e-42 Identity = 77/146 (52.74%), Postives = 99/146 (67.81%), Query Frame = 1
Query: 10 KVIADKGQKTTGVKRSNSSENVTVVATINAAGAKMPPLFIYKGQRVQAAWVCN-RAPPGSWYAATDSSSMEGSVYLSVMKKFKELINNSGLNDGKPHALVLDGHASHVTIDMLKYDMEHNIHLFQLPSHSSHMTQPFDVCAFGLFK 444
+V+A++GQ RS S EN T+V TINAAGA + P I+KGQR WV + PPG++Y T+SS M G V++ +K F + + + L DGKPH LVLDGHASHVT+D++K + NIHL QLPSH SH+TQP DV FG FK
Sbjct: 196 RVMAERGQPVVAQMRSTSRENCTIVTTINAAGAVLAPTIIFKGQRFNGDWVADLNGPPGAYYDCTESSFMCGEVFIKYIKNFHKQLGDRNLLDGKPHVLVLDGHASHVTLDVIKLAISLNIHLVQLPSHMSHITQPLDVAGFGCFK 341
BLAST of mRNA_H-paniculata_contig3468.9247.1 vs. uniprot
Match: A0A6H5JRL2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL2_9PHAE) HSP 1 Score: 150 bits (379), Expect = 4.430e-42 Identity = 74/146 (50.68%), Postives = 98/146 (67.12%), Query Frame = 1
Query: 10 KVIADKGQKTTGVKRSNSSENVTVVATINAAGAKMPPLFIYKGQRVQAAWVCN-RAPPGSWYAATDSSSMEGSVYLSVMKKFKELINNSGLNDGKPHALVLDGHASHVTIDMLKYDMEHNIHLFQLPSHSSHMTQPFDVCAFGLFK 444
+V+A++GQ RS S EN T++ TINAAGA + P FI+KGQR WV + PPG++ T+SS M G V++ +K F + + + L DGKPH LVLDGH SHV++D++K + NIHL QLPSH SH+TQP DV FG FK
Sbjct: 41 RVVAERGQPVVAQMRSTSRENCTIITTINAAGAVLAPTFIFKGQRFNGDWVADLNGPPGAFNDCTESSFMCGEVFIKYIKNFHKQLGDRNLLDGKPHVLVLDGHTSHVSLDVIKLVISLNIHLVQLPSHMSHITQPLDVAGFGCFK 186
BLAST of mRNA_H-paniculata_contig3468.9247.1 vs. uniprot
Match: A0A6H5JK80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK80_9PHAE) HSP 1 Score: 156 bits (394), Expect = 7.600e-42 Identity = 81/146 (55.48%), Postives = 105/146 (71.92%), Query Frame = 1
Query: 10 KVIADKGQKTTGVKRSNSSENVTVVATINAAGAKMPPLFIYKGQRVQAAWVCNR-APPGSWYAATDSSSMEGSVYLSVMKKFKELINNSGLNDGKPHALVLDGHASHVTIDMLKYDMEHNIHLFQLPSHSSHMTQPFDVCAFGLFK 444
KVIA+ GQK G RSNS +NVTVV TI+AAGA + P IYKGQR+QA WV R PP + A TDSS M+G+V+++ ++ F + + GL +G PH LVLDGHASHVT +++K + NI L+Q+PSHSSH+ QP DV +FG FK
Sbjct: 190 KVIAESGQKVVGAMRSNSRDNVTVVVTISAAGATLAPWIIYKGQRMQADWVKGRNGPPNARLAVTDSSFMQGTVFVNYIRDFHRQLLDRGLINGTPHVLVLDGHASHVTYEVVKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFK 335
BLAST of mRNA_H-paniculata_contig3468.9247.1 vs. uniprot
Match: A0A6H5L5E2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5E2_9PHAE) HSP 1 Score: 152 bits (385), Expect = 1.050e-41 Identity = 80/146 (54.79%), Postives = 103/146 (70.55%), Query Frame = 1
Query: 10 KVIADKGQKTTGVKRSNSSENVTVVATINAAGAKMPPLFIYKGQRVQAAWVCNR-APPGSWYAATDSSSMEGSVYLSVMKKFKELINNSGLNDGKPHALVLDGHASHVTIDMLKYDMEHNIHLFQLPSHSSHMTQPFDVCAFGLFK 444
KVI + GQK G RSNS ENVTVV TI+AAGA + P IYKGQR+QA WV R PP + A DSS M+G+V+++ ++ F + + GL +G PH LVLDGHASHVT +++K + NI L+Q+PSHSSH+ QP DV +FG FK
Sbjct: 182 KVITESGQKVGGAMRSNSRENVTVVVTISAAGATLAPWIIYKGQRLQADWVKGRNGPPNARLAVIDSSFMQGTVFVNYIRDFHRQLLDRGLINGTPHVLVLDGHASHVTYEVVKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFK 327
BLAST of mRNA_H-paniculata_contig3468.9247.1 vs. uniprot
Match: A0A6H5JBS6_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBS6_9PHAE) HSP 1 Score: 152 bits (384), Expect = 1.820e-41 Identity = 79/146 (54.11%), Postives = 99/146 (67.81%), Query Frame = 1
Query: 10 KVIADKGQKTTGVKRSNSSENVTVVATINAAGAKMPPLFIYKGQRVQAAWVCNR-APPGSWYAATDSSSMEGSVYLSVMKKFKELINNSGLNDGKPHALVLDGHASHVTIDMLKYDMEHNIHLFQLPSHSSHMTQPFDVCAFGLFK 444
K A+ GQK RSNS EN TVV TI+A GA P I+KGQR+Q W R P + Y TDSS M+G V++ +K F + +++ G+ DGKPH LVLDGHASHV+ +++K ME NI LFQLPSH+SH+TQP DV AFG FK
Sbjct: 176 KAFAEAGQKVVESMRSNSLENTTVVTTISANGATWAPTIIFKGQRLQPDWFAERNGPKDARYTCTDSSFMQGDVFIKYLKDFHKQLDDRGVLDGKPHTLVLDGHASHVSYEVIKLAMELNIILFQLPSHTSHITQPLDVVAFGTFK 321
BLAST of mRNA_H-paniculata_contig3468.9247.1 vs. uniprot
Match: A0A6H5JR11_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR11_9PHAE) HSP 1 Score: 147 bits (370), Expect = 6.460e-41 Identity = 74/146 (50.68%), Postives = 95/146 (65.07%), Query Frame = 1
Query: 10 KVIADKGQKTTGVKRSNSSENVTVVATINAAGAKMPPLFIYKGQRVQAAWVCNR-APPGSWYAATDSSSMEGSVYLSVMKKFKELINNSGLNDGKPHALVLDGHASHVTIDMLKYDMEHNIHLFQLPSHSSHMTQPFDVCAFGLFK 444
+V A++GQ R+NS EN T+V TINAAGA + P I+KG R W+ +R PPG+ Y T+SS M G V++ +K F E + L DGKPH LVLDGHASHV+ ++++ NIHL QLPSH SH+TQP DV FG FK
Sbjct: 118 RVFAEQGQPVVPQMRANSRENCTIVTTINAAGAVLDPTVIFKGVRFNQDWIADRNGPPGATYTCTESSFMCGDVFIKYIKNFHEQLRRRNLLDGKPHVLVLDGHASHVSFEVIQLAKSLNIHLVQLPSHMSHVTQPLDVAGFGCFK 263
BLAST of mRNA_H-paniculata_contig3468.9247.1 vs. uniprot
Match: B2KWI5_ECTSI (Transposase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=B2KWI5_ECTSI) HSP 1 Score: 154 bits (388), Expect = 8.470e-41 Identity = 80/146 (54.79%), Postives = 103/146 (70.55%), Query Frame = 1
Query: 10 KVIADKGQKTTGVKRSNSSENVTVVATINAAGAKMPPLFIYKGQRVQAAWVCNR-APPGSWYAATDSSSMEGSVYLSVMKKFKELINNSGLNDGKPHALVLDGHASHVTIDMLKYDMEHNIHLFQLPSHSSHMTQPFDVCAFGLFK 444
K IA+ GQK G RSNS E VTVV TI+AAGA + P IYKGQR+QA WV R PP + A TDSS M+G+V+++ ++ F + + GL +G PH LVLDGHASHVT +++K + NI L+Q+PSHSSH+ QP DV +FG FK
Sbjct: 182 KAIAESGQKVVGAMRSNSRETVTVVVTISAAGATLAPWIIYKGQRLQADWVKGRNGPPNARLAVTDSSFMQGTVFVNYIRDFHRQLLDRGLINGTPHVLVLDGHASHVTYEVIKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFK 327
BLAST of mRNA_H-paniculata_contig3468.9247.1 vs. uniprot
Match: A0A6H5KGL1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGL1_9PHAE) HSP 1 Score: 149 bits (375), Expect = 1.050e-40 Identity = 77/146 (52.74%), Postives = 98/146 (67.12%), Query Frame = 1
Query: 10 KVIADKGQKTTGVKRSNSSENVTVVATINAAGAKMPPLFIYKGQRVQAAWVCNR-APPGSWYAATDSSSMEGSVYLSVMKKFKELINNSGLNDGKPHALVLDGHASHVTIDMLKYDMEHNIHLFQLPSHSSHMTQPFDVCAFGLFK 444
K A+ GQK RSNS EN TVV TI+A GA P I+KGQR+Q W R P + Y TDSS M+G V++ +K F + +++ G+ DGKPH LVLDGHASHV+ + +K M+ NI LF+LPSH+SH+TQP DV AFG FK
Sbjct: 2 KAFAEAGQKVVESMRSNSRENTTVVTTISANGATWAPTIIFKGQRLQPDWFAERNGPKDARYTCTDSSFMQGDVFIMYLKDFHKQLDDRGVLDGKPHILVLDGHASHVSYEFIKLAMDLNIILFKLPSHTSHITQPLDVVAFGTFK 147 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3468.9247.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3468.9247.1 >prot_H-paniculata_contig3468.9247.1 ID=prot_H-paniculata_contig3468.9247.1|Name=mRNA_H-paniculata_contig3468.9247.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=148bp TSDKVIADKGQKTTGVKRSNSSENVTVVATINAAGAKMPPLFIYKGQRVQback to top mRNA from alignment at H-paniculata_contig3468:6745..7188- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3468.9247.1 ID=mRNA_H-paniculata_contig3468.9247.1|Name=mRNA_H-paniculata_contig3468.9247.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=444bp|location=Sequence derived from alignment at H-paniculata_contig3468:6745..7188- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3468:6745..7188- >mRNA_H-paniculata_contig3468.9247.1 ID=mRNA_H-paniculata_contig3468.9247.1|Name=mRNA_H-paniculata_contig3468.9247.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=888bp|location=Sequence derived from alignment at H-paniculata_contig3468:6745..7188- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |