mRNA_H-paniculata_contig3464.9242.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3464.9242.1 vs. uniprot
Match: D8LMC3_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMC3_ECTSI) HSP 1 Score: 1735 bits (4493), Expect = 0.000e+0 Identity = 941/1521 (61.87%), Postives = 1096/1521 (72.06%), Query Frame = 3
Query: 429 LWVEVFAIPAFFVFFRAAVVTVASVRQGVNTIQNMLKVIRPLSFQSLRLGAACGLVLTVLAGSLTVFALALIRQYLIDGDAEDIFVGVFQVIGAILLTHMGVSVMQQGSSTVRSMRYFQDKLKAVSPTDP--NGPERSQMFYLGLGASLREGLESYLYMLPLGAAYEAQYIPIPGVLGLIAGLLAARYLIPAIVWG----TVDERAIRPDSGAKSWAIRREQLTDQYVSRLAAEAG--GRTDLEDDDEADIDGQPPLLSEASADARAKNMSGLDPDDLKTLFKDSNVDPAELNDADYAQKRLLLLKTSRALM---SSESFEGEDDSEPAILTIQNSIAEGSSQWEGSSAGMPDEMPHLAAIGSLEFSSAGGRRLFHRKGDSLLSVAEDEDGYIDRGGYSNDSGDYQASI---TAGH-----------------RRVASAMRSVTSHRSRTSMNSVRFQGHNSYYDDDDDTRSVMTGFEHRYLNQVGARDTRTELDVMEATLNKSVMSHKKRRDEMRARGDSRGSMRGS-------MKHLHPGSPTDVAPSAPRGGGVGAFASKNSHQTPDDIGGNMALGSQ----QMSRMLRMSMRSKRLSMKQK-----------SMAAVG--------DIEAGIDVDGPYYDMEEMEGKSMFASLCLGISAFVVFLCCAGLFKMGVISIRGVLSDAEDDS---------IFNICGCCASG-DGDVTEKFFAIFEAQFGYTCEESLVGLVSWLCYWVYPLFVMLYAMRMCCFSSIPASSEPQMPAAPTRRQGAAQG-GFSAKSTKRFANGSAPDPARIGRHPTHIWIKMSAMLNIVFGCAYIWWRAVRSMPDDPVSPIWNWLFFAGECILMVGVWTSHLQRAFPSIRDLCTMDDLVEVDSSVASEANVCIMVPTAGEKMKNVMHVLLGAYSQSLWPSVVHASRQLRIAILDEKGRHEV------------RELCEKVYRLAEILVIPS----VQQELCSKFDEPCITPKIFMDYFNQMDALDKFVFSKEAHPAFDIAIRMENYAGKPTNKLVRASSSGAKTLGAGKKSKAKGPAGRLDEGFKQLFDSTRSIPSMIYSARANPGTPKVSPKAGNMNAAIFPNSPGEEPVIGHAARIVVVNDARHRLKTDFLQRTVPYFFKLNKQTRKNYSWADVGFVQTPQRFEDLKDGDPLGNHAVLTFFVSNVSKDGVGGVTSCGQGSLWRVDALRGMAADGRQTVDSVATPDIIGHDCGFRAEVLIEDTHTSLEFFKLQWRSAYVCEPGETLAVCVEQPNTVAWRVKQVFRWHIGAVQLLLKDGVTFMCASNMPSILHKMFGLDSLTYYIQAVGGIFIILMPIMFSIFQETPFNTVDLEFVYFFFPYIITATIPTLLAVGWKNVNPNRVLTDEQFWLSTCYVQIWAFALGIWNRITCANPDNAWNLKCPVWPLGTLFFALGISLINTTAHW-IYTGFDPDEQWIFFASFGACCVVMYSIWPMVKLWWPGWVALPSVYHQKFIAILIFIATTSVLATYI 4724
LW+ +FAIP+FF FFRA+VV ++S R+G N + ++V+RPLS +SL++G CGL+LT+ AG LT+F + L+R Y + G++E F G FQV+GAI+ TH+GVS++QQGS TV S Y+Q+ +K ++ T NGPERS MFYLGLGASLREG+ SY+YMLPLG AYE++ IP+P VLG IAGLLAARYL PA+VWG I PDS AKSWA+RRE LT QYVSRLAAEA G+ L + + D +A +N+S L L+ LF+DSNVDP + +D DYAQKRLL+LK+S+A+M SS S++ +DD EPAIL +QNS GS+ + SA P+ +P L A E AG R LFHRKG SLLS+AEDEDGY+DRGGYS D +Y A TAG + + S + + S S SVRFQG + + +DDDT SVM GF+H+YL Q G RD + EL+VME L ++V + K G SRGS R S M +L PGSP AP+ P GG F IGGNMALGS+ + S+ RMS R S K +M+ +G D+EAG + G +++ KS FA++ L ISAFV+FLCCAGL K+GV+ +R + + +D + +FNICGCC DG V E FFAIF +QFGYTC E+L G+V+W YW+YP+ VM++ MRM CFSSIP + PQM P RR GAAQ GF+ KSTKRF G+ PDPARI HPT WIK+SA+LN+V G AYIWWRA RSMPD+P S +WNWLFFAGE IL GVWTSHLQR+FPS+RD+C+MDDLVE+DS+V++EA VCIMVPTAGEKMKN+ HVLLGAYSQ LW S + S QLRIA+LDEKGR EV +R + PS + FDEP ITPKIFMDYFNQMDALD++VF E HPAFD+A+RMENY G+ KL RASSS G K KA RL+EGFK+LF S+ +IPSMIYSARANPGTPKVSPKAGNMNAAIFPNSPGEEPVIG AR+VVVNDARHRLKT+FLQRTVPYFFKL+++T K Y WADVGFVQTPQRFEDL DGDPLGNHAVLTFFVSNVSKDGVGGVTSCGQGSLWRVDALRGMAADG+Q VDSVA PDI+GHDCGFRAEVLIEDTHTSLEFFK QWRSAYVCE GETLAVCVEQPNTVAWRVKQVFRWHIGAVQLLLKDGV F+C S MP+ LHKMFGLDSLTYYIQAVGG FIILMPIMFSIFQETPFNTVDLEFVYFFFPYIITATIPT+LAVGWKNVNPNRVLTDEQFWLSTCYVQIWAFALG+WNRITCANPDNAWNL CPVWPLG LF L +S INTT +W Y FD D WIF ASFGAC VVMYSIWPMVKLWWPGWV+LPS YHQKF ILIFIA TSVLATYI
Sbjct: 44 LWLGIFAIPSFFAFFRASVVAISSAREGANQLHASVQVLRPLSMRSLKMGTWCGLMLTLFAGGLTIFFMELLRFYALSGNSETAFTGFFQVVGAIVFTHLGVSILQQGSRTVSSGTYYQEMIKKINQTTETANGPERSTMFYLGLGASLREGIMSYIYMLPLGGAYESKNIPLPAVLGAIAGLLAARYLAPALVWGGGPLEGGVAGIIPDSKAKSWAVRREALTHQYVSRLAAEAQQTGQAALNSNGDESKDAS---RKSGAAAVYPRNLSNLSAKALEELFRDSNVDPKDFDDMDYAQKRLLVLKSSKAIMKHGSSGSYD-DDDREPAILALQNSEQWGSTSSDPESA-FPERIPGLVAG---EPDGAGQRGLFHRKGQSLLSIAEDEDGYLDRGGYSYDGAEYPAHPVVPTAGDSGKPPMHXXXXXXXXXXKSIGSNGPKMGRNNSGQSGASVRFQGFDEHNYEDDDTASVMQGFQHKYLRQAGPRDRQAELEVMETALTRTVTARKNN-------GGSRGSTRSSAXXXXXNMANLRPGSPQGNAPAPPSGGFGEDF------DVDQSIGGNMALGSRSGKPKSSKSARMSRRGSTKSRKGSGXXXXXXSRHGAMSGIGEDEEDDDGDVEAGFN--GRNAIPDDIADKSFFATITLSISAFVIFLCCAGLLKLGVLDLRELWTQDDDSTDTTDSSAVEVFNICGCCQENEDGSVAEIFFAIFNSQFGYTCTETLTGIVAWAAYWIYPVLVMMFHMRMYCFSSIPVKALPQMAEMPQRRTGAAQATGFTMKSTKRFLAGNYPDPARIKHHPTSFWIKLSAVLNVVAGAAYIWWRATRSMPDNPKSVVWNWLFFAGEVILTFGVWTSHLQRSFPSVRDVCSMDDLVEIDSNVSNEATVCIMVPTAGEKMKNLKHVLLGAYSQRLWVSRLPTSSQLRIAVLDEKGRREVSVTTLVARGAMGERKSATSWRRCTVWPRPSSSPPYSRSCAPSFDEPFITPKIFMDYFNQMDALDQYVFGPECHPAFDMAVRMENYTGQA--KLARASSSS----GVPGKKKAAKALPRLEEGFKKLFRSSPNIPSMIYSARANPGTPKVSPKAGNMNAAIFPNSPGEEPVIGDPARVVVVNDARHRLKTEFLQRTVPYFFKLDRRTGKKYEWADVGFVQTPQRFEDLGDGDPLGNHAVLTFFVSNVSKDGVGGVTSCGQGSLWRVDALRGMAADGKQVVDSVAKPDIVGHDCGFRAEVLIEDTHTSLEFFKQQWRSAYVCEAGETLAVCVEQPNTVAWRVKQVFRWHIGAVQLLLKDGVGFLCTSRMPTPLHKMFGLDSLTYYIQAVGGFFIILMPIMFSIFQETPFNTVDLEFVYFFFPYIITATIPTILAVGWKNVNPNRVLTDEQFWLSTCYVQIWAFALGVWNRITCANPDNAWNLVCPVWPLGLLFGLLIVSAINTTVYWAFYLSFDEDGIWIFLASFGACIVVMYSIWPMVKLWWPGWVSLPSAYHQKFCYILIFIALTSVLATYI 1535
BLAST of mRNA_H-paniculata_contig3464.9242.1 vs. uniprot
Match: A0A836CP13_9STRA (Glyco_trans_2-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP13_9STRA) HSP 1 Score: 504 bits (1297), Expect = 2.980e-152 Identity = 304/758 (40.11%), Postives = 431/758 (56.86%), Query Frame = 3
Query: 2562 GAAQGGFSAKSTKRFANGSAPDPARIGRHPTHIWIKMSAMLNIVFGCAYIWWRAVRSM--PDD-----PVSPI--WNWLFFAGECILMVGVWTSHLQRAFPSIRDLCTMDDLVEVDSSVASEANVCIMVPTAGEKMKNVMHVLLGAYSQSLWPSVVHASRQLRIAILDEKGRHEVRELCEKVYRLAEILVIPSVQQELCSKFDEPCITPK----------------IFMDYF-NQMDALDKFVFSKEAHPAFDIAI--RMENYAGKPTNKLVRASSSGAKTLGAGKKSKAKGPAG-RLDEGFKQLFDSTRSIPSMIYSARANPGTPKVSPKAGNMNAAIFP-NSPGEEPVIGHAARIVVVNDARHRLKTDFLQRTVPYFFKLNKQTRKNYSWADVGFVQTPQRF-EDLKDGDPLGNHAVLTFFVSNVSKDGVGGVTSCGQGSLWRVDALRGMAADGRQTVDSVATPDIIGHDCGFRAEVLIEDTHTSLEFFKLQWRSAYVCEPGETLAVCVEQPNTVAWRVKQVFRWHIGAVQLLLKDGVTF-MCASNMPSILHKMFGLDSLTYYIQAVGGIFIILMPIMFSIFQETPFNTVDLEFVYFFFPYIITATIPTLLAVGWKNVNPNRVLTDEQFWLSTCYVQIWAFALGIWNRITCANPDNAWNLKCPVWPLGTLFFALGISLINTTAHWIYTGFDPDEQWIFFASFGACCVV-----MYSIWPMVKLWWPGWVALPSVYHQKFIAILIFIATTSVLATYI 4724
G GG S + PDP + P+ I+ +LNI CAY+WWR R++ DD P P+ W W F+A E L + +W H QR F R TMDD+V D SV + V I++PT GEK+ VM LLG S W + V R+ +LDEK R V + VY LA I+ P+V L ++ IT K ++ D+F NQ L +++ + + A +++ E AG + V+ +S A +A ++ G+ Q F++ ++P++IY R + GTPKVSPKAGNMN+A+F + P P+IG ++ IVVVND RH+L+ +FLQRTVPYFF+L+ ++ Y WA V FVQTPQRF +++ DPLGNHA + + V N KDG+G V+S GQGSLWRV AL+G+ ADG D V ++GH GFR+E+LIEDTHTS+E F+ W S YV EPGE L++C QPN++AWR+KQV RWH GAVQLL G+ F + P+I H+++ D TYY+QA+ G ++LMPI++ + + PFNT EF FF P+I+TA +PT+++ W+ V+ +R+ DEQ WLST YVQI+AF W +I C +AW ++ P WPL +F ++I GF E+W A+ C +V ++++WPMV L GW +PS+Y+ K +A L+ I VL YI
Sbjct: 314 GVMDGGVSDVDPNFLTKMNKPDPQGMTPLPSAFVIRAIVVLNICVSCAYLWWRVTRTIFQIDDYFFGIPFLPVQGWAWAFYAVEICLTIAIWIGHTQRLFAVQRVRLTMDDIVREDDSVGYNSRVAILLPTNGEKLDVVMKALLGVVSLRGWDTSVEKCAAQRVVVLDEKRRKGVLNMAAAVYALATIVRHPNVLSILQAE-GVHAITAKGFYEWWKTGGGYARKHLYNDHFLNQACRLLEYMEEEASTEAVAMSVFGLEELPAGVKGKQDVKRNSKKTTQASANSMLQAMNVGNVTIEPGYVQTFNTNVALPTLIYYTRRDAGTPKVSPKAGNMNSALFALDYPDMPPLIG-SSTIVVVNDCRHQLQPEFLQRTVPYFFELDADGQR-YRWAKVAFVQTPQRFTNNVQADDPLGNHAAVQYDVINHGKDGIGAVSSSGQGSLWRVAALKGVDADGNSYAD-VKERGLVGHRLGFRSEMLIEDTHTSIEMFRAGWSSRYVNEPGEHLSICTHQPNSIAWRIKQVLRWHQGAVQLLFFKGIGFTVWGGKFPTIFHRIYAFDQATYYLQAIPGYMLLLMPIIYGVCGQPPFNTTVGEFFLFFTPFIVTAMLPTVISGSWRGVDSHRLTRDEQVWLSTTYVQIYAFLSMCWQQIRCKGTADAWAVRAPTWPLFAVFAGEFGAIIGALVWVSQEGF---ERW---AANLICVIVSASLAIHALWPMVSLQM-GW-QVPSLYYLKLLAWLL-IGIFIVLIYYI 1058
BLAST of mRNA_H-paniculata_contig3464.9242.1 vs. uniprot
Match: A0A835YVP7_9STRA (Cellulose synthase, family GT2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVP7_9STRA) HSP 1 Score: 478 bits (1229), Expect = 3.440e-146 Identity = 276/723 (38.17%), Postives = 404/723 (55.88%), Query Frame = 3
Query: 2622 PDPARIGRHPTHIWIKMSAMLNIVFGCAYIWWRAVRSMPDD----------PVSPIWNWLFFAGECILMVGVWTSHLQRAFPSIRDLCTMDDLVEVDSSVAS-EANVCIMVPTAGEKMKNVMHVLLGAYSQSLWPSVVHA-SRQLRIAILDEKGRHEVRELCEKVYRLAEILVIPSVQQELCSKFDEPCITPKIFMDYFNQMDALDKFVFSKEAH-----PAFDIAIRME----------NYAGKPTNKLVRASSS--GAKTLGAGKKSKAKGPAG--RLDEGFKQLFDSTRSIPSMIYSARANPGTPKVSPKAGNMNAAIFP-NSPGEEPVIGHAARIVVVNDARHRLKTDFLQRTVPYFFKLNKQTRKN----YSWADVGFVQTPQRF-EDLK-DGDPLGNHAVLTFFVSNVSKDGVGGVTSCGQGSLWRVDALRGMAADGRQTVDSVATPDIIGHDCGFRAEVLIEDTHTSLEFFKLQWRSAYVCEPGETLAVCVEQPNTVAWRVKQVFRWHIGAVQLLLKDGVTFMC-ASNMPSILHKMFGLDSLTYYIQAVGGIFIILMPIMFSIFQETPFNTVDLEFVYFFFPYIITATIPTLLAVGWKNVNPNRVLTDEQFWLSTCYVQIWAFALGIWNRITCANPDNAWNLKCPVWPLGTLFFALGISLINTTAHWIYT-GFDPDEQWIFFASFGACCVVMYSIWPMVKLWWPGWVALPSVYHQK 4670
PDP R +H+ I+ + N+ F Y+WWR ++ PV W W F+A E L +G+W H QR F +V+S A VCI++PTAGE++ VM LLG SQ +W + S ++ +LDEK R V ++C VY LA + PS+ Q L ++ + I K +++ + ++H + +R+ N P ++L A+ L G P G ++ F Q F + ++P+++Y R +PGTP+VSPKAGNMN+A+FP + P +E ++G + I+ VND RH+L+ +FLQRTVPYFFKL + Y+W V FVQTPQRF +D+ + DPLGN+A + + + N KDG+G V+S G GSLWRV+AL+G+AADG + D +IG + GFR+E+LIEDTHTS++ F+ W S YV EPGE L+ C QP+++AWR+KQV RWH GAVQLL G+TF P+I H+++ D TYY+QA+ G ++LMPI++ I E+PFNT EF FF PYI++A +PTL++ W+ V+ N++ DEQ WLST YVQ++AF + + C +NAW +K P WPL +FF I W+ GFD Q + + + + ++++WPMV + GW +PS YH K
Sbjct: 9 PDPQRTTPMSSHLLIRCVILANLAFSVLYLWWRVTSTITTINSYFFGIKALPVQA-WGWTFYAVEICLTIGIWIGHSQRLF-----------------AVSSYNARVCILLPTAGERLDIVMLALLGCISQRMWACGRKSKSAMFKVIVLDEKRRKAVLQMCAAVYALATLARSPSIVQILQAE-NAASIDAKGLYEWWRDGGGHARRHLYNDSHLNRACQLLEFMLRLSLCEGNEGNLFNLTEMPEDQLQSPDQKKRSARHLVEGLLQALNIPQGAAKIPPAFMQSFSTNGALPTLVYYTRRDPGTPRVSPKAGNMNSALFPIDYPDDESLVGDST-IIAVNDCRHQLQPNFLQRTVPYFFKLQQSANDGSGLEYTWDRVAFVQTPQRFPKDMNAEDDPLGNNAAVQYDIINHGKDGIGAVSSSGHGSLWRVEALKGLAADGTRYADPTNRA-LIGSEVGFRSEMLIEDTHTSIDMFRHGWTSRYVNEPGEHLSTCTHQPDSIAWRIKQVLRWHQGAVQLLFYKGITFTSFGGKFPTIWHRVYAFDQATYYLQAIPGYILLLMPIIYGITGESPFNTEVAEFFLFFTPYIVSAMLPTLISGSWRGVDANKLQRDEQVWLSTTYVQVYAFLSMLATALRCQKHENAWAVKAPTWPLFAVFFG-EFCAIGGALFWVARYGFDRWSQNLL-SVLASAALAVFALWPMVAMQM-GW-RIPSAYHLK 706
BLAST of mRNA_H-paniculata_contig3464.9242.1 vs. uniprot
Match: D7FSC3_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSC3_ECTSI) HSP 1 Score: 483 bits (1244), Expect = 3.120e-145 Identity = 292/761 (38.37%), Postives = 424/761 (55.72%), Query Frame = 3
Query: 2649 PTHIWIKMSAMLNIVFGCAYIWWRAVRSMPD-----DPVS--PIWNWLFFAGECILMVGVWTSHLQRAFPSIRDLCTMDDLVEVDSSVASEANVCIMVPTAGEKMKNVMHVLLGAYSQSLWPSVVHASRQLRIAILDEKGRHEVRELCEKVYRLAEILVIPSVQQELCSKFDEPCITPKIFMDYFNQ---------------------MDALDKF--------VFSKEAHP-----------AFDIAIRMENYAGKPTNKLVRASSSGAKTLGAGKKSKAKGPAGRLDEGFKQLFDS-------------TRSIPSMIYSARANPGTPKVSPKAGNMNAAIFP-NSPGEEPVIGHAARIVVVNDARHRLKTDFLQRTVPYFFKL-----NKQTRKNYSWADVGFVQTPQRFEDLKDGDPLGNHAVLTFFVSNVSKDGVGGVTSCGQGSLWRVDALRGMAADGRQTVDSVATPDIIGHDCGFRAEVLIEDTHTSLEFFKLQWRSAYVCEPGETLAVCVEQPNTVAWRVKQVFRWHIGAVQLLLKDGVTFMC-ASNMPSILHKMFGLDSLTYYIQAVGGIFIILMPIMFSIFQETPFNTVDLEFVYFFFPYIITATIPTLLAVGWKNVNPNRVLTDEQFWLSTCYVQIWAFALGIWNRITCANPDNAWNLKCPVWPLGTLFFALGISLINTTAHWIYTGFDPDEQWIFFASFGACCVV----MYSIWPMVKLWWPGWVALPSVYHQKFIAILIFIATTSVLAT 4718
P+ +++ A+ N G Y+ WR + P D +S W WLFF+ E L + VW QR FP R TMDD+ VD V A VCI++PTAGE ++ V L+GA SQ LW S + S+ LR+ +LDEK R EV + V+R+ E+L +QQ L ++ +T K F+D+ + LD F+ EA P A++ A + + + KP+ + + S A++ K A A + GF +++ + + +P++IY +R N GTPK+SPKAGNMNAAIFP + P P+ G + IVVVNDARH+L+ +FLQRTVPYFF+L + Y WA V FVQTPQRF DPLGNHA+ + V N KDG+G V+S GQGSLWRV+AL+G DG+ VD D++G GFR+E+LIEDTHTS+E F+ WRS YV EPGE LA C QP+++ WR+KQV RWH GAVQLLL G+ + + P++ H+++ D TYY+QA+ G +++MPI++ + PF T ++ +F P+I+TA +PT ++ W+ ++ +R+ DEQ WLST YVQI+AF +W +T +P+NAW K P WPL +F ++ + GF I++A+F + VV M+++WPMV L GW ++PS Y+ K + +F+ ++V+ T
Sbjct: 264 PSAHLVRVLAVANAGLGVLYLHWRYTSTFPPTVGRWDYMSWKLYWWWLFFSAEFFLAIAVWVGLAQRLFPVQRIKVTMDDITSVDDQVGYNARVCILLPTAGENLEVVFKALVGALSQRLWDSGLPGSQTLRVIVLDEKRRLEVYRVAAGVHRIGELLAGRRIQQILMAEGVTE-LTQKGFIDWCRNGSGYERKHLYDDKKLNEAVQVLRLLDAMCLANGLTDAFALEARPSSATYNPITAAAWNAAAQAQK-SNKPSVEAMAEMSDAARSEAEAKMLGAS--AMNITPGFFEVYGTHLDPDNMETSKEVQKGLPTLIYYSRKNAGTPKISPKAGNMNAAIFPVDDPTMTPLTGEST-IVVVNDARHQLEGNFLQRTVPYFFELAGGHPTVASGGRYRWAKVAFVQTPQRFRMELSNDPLGNHAISQYDVINHGKDGIGAVSSSGQGSLWRVEALKGQRPDGK-IVDDPTELDLVGKKLGFRSEMLIEDTHTSIELFRQGWRSVYVNEPGEVLAWCTHQPSSLTWRIKQVLRWHQGAVQLLLFKGIRYTSFGGHFPTMWHRLYAFDQATYYLQAIPGYVLLIMPIVYGVTGTPPFVTSLKDYFQYFTPFIVTALLPTAISSQWRKIDSHRLTRDEQTWLSTTYVQIYAFLQVVWTGLTRKSPENAWVAKVPTWPLTFVFLGQVFAVAGGVYWVVQKGFV-----IWYANFFSIVVVAGLAMHALWPMVSLSL-GW-SIPSFYYIKLF-LWVFLGFSAVVLT 1010
BLAST of mRNA_H-paniculata_contig3464.9242.1 vs. uniprot
Match: D7FSC4_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSC4_ECTSI) HSP 1 Score: 470 bits (1210), Expect = 7.550e-143 Identity = 273/687 (39.74%), Postives = 396/687 (57.64%), Query Frame = 3
Query: 2664 IKMSAMLNIVFGCAYIWWRAVRSMPDDPVSPIWNWLFFAGECILMVGVWTSHLQRAFPSIRDLCTMDDLVEVDSSVASEANVCIMVPTAGEKMKNVMHVLLGAYSQSLWPSVVHASRQ----LRIAILDEKGRHEVRELCEKVYRLAEILVIPSVQQELCSKFDEPCITPKIFMDYFNQMDALDKFVFSKEAHPAFDIAI--------------------RMENYAGKPTNKLVRASSSGAK----TLGAGKKSKAKGPAGRLDEGFKQLF-DSTRSIPSMIYSARANPGTPKVSPKAGNMNAAIFP-NSPGEEPVIGHAARIVVVNDARHRLKTDFLQRTVPYFFKLNKQTRKNYSWADVGFVQTPQRF-EDLKDGDPLGNHAVLTFFVSNVSKDGVGGVTSCGQGSLWRVDALRGMAADGRQTVDSVATPDIIGHDCGFRAEVLIEDTHTSLEFFKLQWRSAYVCEPGETLAVCVEQPNTVAWRVKQVFRWHIGAVQLLLKDGVTFMC-ASNMPSILHKMFGLDSLTYYIQAVGGIFIILMPIMFSIFQETPFNTVDLEFVYFFFPYIITATIPTLLAVGWKNVNPNRVLTDEQFWLSTCYVQIWAFALGIWNRITCANPDNAWNLKCPVWPLGTLFFALGISLINTTAHW-IYTGFDPDEQWIFFASFGACCVVMYSIWPMVKL 4625
I+ +LN+ G Y+ WR +++ P +FF E L+ +W H QR F R TMD +V +D +V + A V I++PTAGE++ V+ LLGA SQ WPS A LR+ +LDEK R EV L V+ L+ ++ PS ++ L ++ +TP F ++ ++ K K+ + +A+ R +++ + ++ + S G + T G S + + GF Q+F + MIY +R + GTP++SPKAGNMNAA+FP + P P+IG + IVVVNDARH+L+ +FLQRT PYFF ++ T++ Y WA V FVQTPQRF +DL D DPLGNHA + V N+ KDG+G V+S GQGSLWRV+AL+G + DG+ VD ++G GFRAE+LIEDTHTS+E F+ WRS YV EPGE LA C QP + WR+KQV RWH GAVQLL G+ + + P++ H+M+ D TYY+QA+ G ++LMP+++ + + PFNT + +F P+I+TA +PT+++ W++++ +R+ DEQ WLST YVQI+AF W R+ NPD+AW + P WPL TL FA I +W ++ GFD + GA + M+ +WPM+ L
Sbjct: 93 IRGVVVLNVASGFTYMVWRFLKTQDVPPEYKWXXXVFFMVEVFLLFAIWLGHSQRLFAVQRIRTTMDQIVSIDPAVGANAVVAILLPTAGERLDVVLKCLLGASSQRSWPSSSAAKMGRGDGLRVIVLDEKRRKEVYMLTSGVHALSTQILAPSTRKILQAEGVRN-LTPLAFYEWCHEKRGFGKVHIFKDVGLSRAVAMVRQMDDLVTGDDGGDLYRLDRNQSFLNQGLDEDISKSKEGDEVEELTHGV---SLLADESVHITPGFFQVFRGQAKQAACMIYYSRKDAGTPRISPKAGNMNAAMFPIDDPTSPPLIGPST-IVVVNDARHQLQPEFLQRTTPYFFDVDAITQQ-YKWAKVAFVQTPQRFRKDLPD-DPLGNHAASQYDVINIGKDGIGAVSSSGQGSLWRVEALKGRSPDGKTGVDPKDLG-LVGKKLGFRAEMLIEDTHTSIELFRQGWRSVYVNEPGEVLAWCTHQPTNLTWRIKQVLRWHQGAVQLLYTKGLRYTSFGGSFPTVFHRMYAFDQATYYLQAIPGYVLLLMPVVYGVTGQPPFNTDITSYFSYFVPFIVTAVLPTVISAQWRSIDSHRLTRDEQTWLSTTYVQIYAFLQVSWTRLIRGNPDHAWVARVPTWPL-TLVFAAQFVAIAGAVYWTLHNGFDTYYKNTLSICAGAF-LGMFYLWPMMAL 769
BLAST of mRNA_H-paniculata_contig3464.9242.1 vs. uniprot
Match: A0A835YSM9_9STRA (Cellulose synthase, family GT2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSM9_9STRA) HSP 1 Score: 465 bits (1197), Expect = 4.960e-141 Identity = 279/715 (39.02%), Postives = 402/715 (56.22%), Query Frame = 3
Query: 2622 PDPARIGRHPTHIWIKMSAMLNIVFGCAYIWWRAVRSMPDDPVSPIWNWLFFAGECILMVGVWTSHLQRAFPSIRDLCTMDDLVEVDSSVASEANVCIMVPTAGEKMKNVMHVLLGAYSQSLWPSVVHASRQLRIAILDEKGRHEVRELCEKVYRLAEILVIPSVQQELCSKFDEPCITPKIFMDYFNQMDALDKFVFSKEAHPAFDIAIRMENYAGKPTNKLVRASSSGAKTLGAGKKSK----------AKGPAGRL-----------DEGFKQLFDSTRSIPSMIYSARANPGTPKVSPKAGNMNAAIFP-NSPGEEPVIGHAARIVVVNDARHRLKTDFLQRTVPYFFKLNKQTRKNYSWADVGFVQTPQRFEDLKDGD-PLGNHAVLTFFVSNVSKDGVGGVTSCGQGSLWRVDALRGMAADGRQTVDSVATPDIIGHDCGFRAEVLIEDTHTSLEFFKLQWRSAYVCEPGETLAVCVEQPNTVAWRVKQVFRWHIGAVQLLLKDGVTFMC-ASNMPSILHKMFGLDSLTYYIQAVGGIFIILMPIMFSIFQETPFNTVDLEFVYFFFPYIITATIPTLLAVGWKNVNPNRVLTDEQFWLSTCYVQIWAFALGIWNRITCANPDNAWNLKCPVWPLGTLFFALGISLINTTAHWIYTGFDPDEQWI--FFASFGACCVVMYSIWPMVKLWWPGWVALPSVYHQKFIAILI 4688
PDP + P+ + I+ ++NI AY++WR ++ + +F G L V R TMD+LV D SV + V I++PT GE + VM +LG S W + V R+ ILDEK R V + VY LA I+ P+V L ++ + IT K F +++ + + H +E + N+ V S G + L AG K K + A + + G+ Q F++ ++P+ IY R + GTPKVSPKAGNMNAA+F + P P+IG++ IVVVND RH+L+ +FLQRT+PYFF+L+ ++ Y WA V FVQTPQRF+ + D PLGNHA + + V N KDG+G V+S GQGSLWRV AL+G+ ADG+Q D+ +IGH GFR+E+LIEDTHTS+E F+ W S YV EPGE L++C QPN++AWR+KQV RWH GAVQLL G+ F C P+I H+++ D TYY+QA+ G ++LMPI++ + E PFNT EF FF P+I+TA +PT+++ W+ V+ +R+ DEQ WLST YVQI+AF W +I C D+AW ++ P WPL +F +++ I+ + E+W + + + ++++WPMV L GW +PS+Y+ K +A LI
Sbjct: 109 PDPQTMTPLPSAMVIRAIVIINIGVSLAYLYWRVTHTITNIDS-------YFFGITWLPV--------------RIKMTMDELVREDDSVGYNSRVAILLPTNGENLDVVMKAMLGCISLRGWDASVEKCISQRVVILDEKRRKGVLNMAAAVYALATIVRHPNVLSILQAEGVQ-AITAKGFYEWWKTGGGYARKHLYND-HFLNQACRLLEYMEEEAANEAVAMSVFGLEELPAGVKGKQDVKRNSKKTTQATANHMLQALNVGNVTIEPGYVQTFNTNVALPTFIYYTRRDAGTPKVSPKAGNMNAALFALDYPDMPPLIGNST-IVVVNDCRHQLQPEFLQRTIPYFFELDADGQR-YRWAKVAFVQTPQRFQTNQQADDPLGNHAAVQYDVINHGKDGIGAVSSSGQGSLWRVAALKGVDADGQQYADTQQRS-LIGHRLGFRSEMLIEDTHTSIEMFRAGWGSRYVNEPGEHLSMCTHQPNSIAWRIKQVLRWHQGAVQLLFFKGIGFTCWGGKFPTIFHRIYAFDQATYYLQAIPGYMLLLMPIIYGVTGEPPFNTKVGEFFLFFTPFIVTAMLPTVISGSWRGVDSHRLTRDEQVWLSTTYVQIYAFLSMCWQQIRCKGTDDAWAVRAPTWPLFVVFAGEFAAIVGAM---IWVSKEGFEKWAANLISIIVSASLAIHALWPMVSLQM-GW-QVPSLYYLKLMAWLI 792
BLAST of mRNA_H-paniculata_contig3464.9242.1 vs. uniprot
Match: A0A835YIK8_9STRA (Cellulose synthase, family GT2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIK8_9STRA) HSP 1 Score: 461 bits (1187), Expect = 6.280e-141 Identity = 266/693 (38.38%), Postives = 388/693 (55.99%), Query Frame = 3
Query: 2718 RAVRSMPDDPVSPIWNWLFFAGECILMVGVWTSHLQRAFPSIRDLCTMDDLVEVDSSVASEANVCIMVPTAGEKMKNVMHVLLGAYSQSLWPSVVHASRQLRIAILDEKGRHEVRELCEKVYRLAEILVIPSVQQELCSKFDEPCITPKIFMDYFNQ--------------------MDALDKFVFSKEAHPAFDIAIRMENYA----GKPTNKLVRASSSGAKTLGAGKKSKAKGPAGRLDEGFKQLFDSTRSIPSMIYSARANPGTPKVSPKAGNMNAAIFPNSPGEEPVIGHAARIVVVNDARHRLKTDFLQRTVPYFFKLNKQTRKNYSWADVGFVQTPQRFEDLK---DGDPLGNHAVLTFFVSNVSKDGVGGVTSCGQGSLWRVDALR-GMAADGRQTVDSVATPD-IIGHD--CGFRAEVLIEDTHTSLEFFKLQWRSAYVCEP----GETLAVCVEQPNTVAWRVKQVFRWHIGAVQLLLKDGVTFMCAS-NMPSILHKMFGLDSLTYYIQAVGGIFIILMPIMFSIFQETPFNTVDLEFVYFFFPYIITATIPTLLAVGWKNVNPNRVLTDEQFWLSTCYVQIWAFALGIWNRITCANPDNAWNLKCPVWPLGTLFFALGISLINTTAHWIYTGFDPDEQWIFFASFGACCVVMYSIWPMVKLWWPGWVALPSVYHQKFIAILI 4688
R +S+ D PIW ++FF E +L+VG+ SH+ RAFP R+ TMD+LV+ D + V I++PTAGEK++ ++ L G LW S LR+ ILDEK R +V++L VY LAE+++ V+ ++ + + P T + F + F+ +D +DK + H + R++ A P + A + S + GF + + +P+++Y +R + G P+VSPKAGNMN AIF E +I AA ++VVNDARH L+ +FLQR +PYFF + + Y WADV FVQTPQRF+D+ D DPLGN A F + N +DG GV SCGQGSLWRV ALR G+ DG + +D+ A + +IG GFR+EVLIEDTHTSL+ + WRS YV P GE LA C P++V WRVKQV RWH GAVQL L G ++ S + S ++F LD++TY +QA G +++ PI++ ++PFN ++L+F +FFP++ITA +PT+ A+GW + +RV+ DEQ W +T YVQ+ A IW ++ +P +AW CPVWPL F A+ +++ T +WI GF W++ + GA ++S+WP+V V LP Y+ + +LI
Sbjct: 14 RLTKSL-DGIKYPIWGYIFFGAEVLLIVGLLVSHVSRAFPIHRERVTMDELVDSDPQTG-DLKVAILLPTAGEKLQVMLQALFGVLQLRLWSSSRARCDTLRVIILDEKRRWQVQQLASLVYTLAEVVLDKGVR-DILRREEVPASTARAFYELFSDGLRRHTMNTDNLMFVRGVAIVDEIDKLL-----HDSDGSVHRLDGTATTSLAPPXXXXXXXXXXXXXXVRARRASCF--VQNTISPGFTKTWAKNARLPTLVYHSRTDAGMPRVSPKAGNMNCAIFRKDGKGETLIAGAA-VIVVNDARHALQPEFLQRALPYFFTRDARRAGAYVWADVAFVQTPQRFDDVPQWADPDPLGNQAATQFDIVNPGRDGASGVLSCGQGSLWRVAALRDGIRPDGSKYIDTKADREGLIGRTGGLGFRSEVLIEDTHTSLDLLRQGWRSVYVVSPASSKGEVLARCTLPPDSVTWRVKQVLRWHQGAVQLALSHGFAYVFGSGHWASPWQRVFALDAITYVLQAFAGQILLVFPIVYGFTNQSPFNALNLQFATYFFPFLITAALPTMAALGWLKTSSDRVMRDEQVWFATTYVQLQAVCNVIWCKLLRRDPADAWTATCPVWPLYAQFLAIAAAMVANTGYWIQRGFT--SPWVWVSCMGAGLFALHSLWPLVSFGLG--VTLPPAYYNRVFGMLI 691
BLAST of mRNA_H-paniculata_contig3464.9242.1 vs. uniprot
Match: D7FIF6_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIF6_ECTSI) HSP 1 Score: 489 bits (1260), Expect = 2.920e-140 Identity = 266/711 (37.41%), Postives = 404/711 (56.82%), Query Frame = 3
Query: 2625 DPARIGRHPTHIWIKMSAMLNIVFGCAYIWWRAVRSMPD-DPVSPIWNWLFFAGECILMVGVWTSHLQRAFPSIRDLCTMDDLVEVDSSVASEANVCIMVPTAGEKMKNVMHVLLGAYSQSLWPSVVHASRQLRIAILDEKGRHEVRELCEKVYRLAEILVIPSVQQELCSKFDEPCITPKIFMDYFNQMDALDKFVFSKEAHPAFDIAIRMENYAGKPTNKLVRASSSGAKTLGAGKKSKAKGPAGR--------LDEGFKQLFDSTRSIPSMIYSARANPGTPKVSPKAGNMNAAIFPNSPGEEPVIGHAARIVVVNDARHRLKTDFLQRTVPYFFKLNKQTRKNYSWADVGFVQTPQRFEDL---KDGDPLGNHAVLTFFVSNVSKDGVGGVTSCGQGSLWRVDALR-GMAADGRQTVDSVATPDIIGHD--CGFRAEVLIEDTHTSLEFFKLQWRSAYVCEPGETLAVCVEQPNTVAWRVKQVFRWHIGAVQLLLKDGVTF-MCASNMPSILHKMFGLDSLTYYIQAVGGIFIILMPIMFSIFQETPFNTVDLEFVYFFFPYIITATIPTLLAVGWKNVNPNRVLTDEQFWLSTCYVQIWAFALGIWNRITCANPDNAWNLKCPVWPLGTLFFALGISLINTTAHWIYTGFDPDEQWIFFASFGACCVVMYSIWPMVKLWWPGWVALPSVYHQKFIAILIFIATTSV 4709
+P P+ WI+ ++N++ AY+WWR RS+ D + IW ++F + ECI+ +G+ H R+FP+ R+ MDDL ++D ++ + V +++PT GEK ++ L G LW S LRI +LDEK R EV +L VY L+E+++ +V++ L + P I+ K F ++F + + ++ ++ + + + R S S A S+ K A R + G K++++ + IP+++Y +R + G P++SPKAGNMN AIF +P EEP+IG AA ++V+ND RH L +FLQRTVPYFF +K R+ Y WA++ F+QTPQRF D D DPLGN A F + N +DG GG SCGQGS+WRV LR G+ DG + V D +G GFRAEVLIEDTHTS++ F+ W+S YV P E LA C P+TV WR KQV RWH GAVQL + G + + N + K+F D+++Y++QA G +++ PI++ PFNT ++EF +FFP+IIT +PT+ A+GW+ +V+ DEQ W +T +VQI+A +W IT +P NAW KCPVWPL F A+ I++ TA W ++ E W++ + G+ ++S+WP+V V +P ++ + +L+ + S+
Sbjct: 1318 EPQHTESAPSAWWIRTIGVINLLCMAAYLWWRITRSLKGVDHI--IWAFIFLSAECIMAIGMIVGHSSRSFPAHREKVYMDDLTDIDEAIGA-LKVAVLIPTCGEKTAVMLKALFGNLQLRLWKSKNARRDTLRILVLDEKRREEVHKLVSLVYTLSEVVLDKTVREILMREGVAP-ISAKGFYEHFANGEHGQRMYDDVNFIRGIEVVSEIDKLIAENDDNISRFSPSVAI-------SRIKERARRASCFDRKEIQPGQKKVWNRNKYIPTIVYYSRIDAGQPRISPKAGNMNRAIFSFNPQEEPLIGEAA-VIVINDVRHELYPEFLQRTVPYFFTFDKP-RRCYKWANIAFIQTPQRFHDRTDWNDPDPLGNQAATQFDIVNSGRDGAGGALSCGQGSVWRVQVLRDGIRPDGTKFVKKGMPEDQVGQQGGLGFRAEVLIEDTHTSIDLFRQGWKSVYVNFPNERLACCTLPPDTVKWRWKQVLRWHQGAVQLAMWKGWGYAVLGENWGTTFQKVFAFDAVSYFLQAFAGEILLIFPIVYGFTNSAPFNTWNIEFALYFFPFIITGVLPTVAALGWQKTPSAKVMRDEQIWFATSFVQIYAVMHAVWGTITRKDPSNAWECKCPVWPLYLHFVAITIAVCFNTADWAARSYE--EPWVWVSCIGSALFALHSLWPVVSFGLG--VTMPEAFYTRVFGMLVVMTLVSL 2011
BLAST of mRNA_H-paniculata_contig3464.9242.1 vs. uniprot
Match: A0A835ZCE1_9STRA (Cellulose synthase, family GT2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCE1_9STRA) HSP 1 Score: 467 bits (1201), Expect = 8.270e-140 Identity = 278/725 (38.34%), Postives = 401/725 (55.31%), Query Frame = 3
Query: 2664 IKMSAMLNIVFGCAYIWWRAVRSMPDD----------PVSPIWNWLFFAGECILMVGVWTSHLQRAFPSIRDLCTMDDLVEVDSSVASEANVCIMVPTAGEKMKNVMHVLLGAYSQSLWPSVVHASRQ-LRIAILDEKGRHEVRELCEKVYRLAEILVIPSVQQELCSK-------------------------FDEPCITPK-IFMDYF-----NQMDALDKFVFSK---EAHPAFDIAIR---MENYAGKPTNKL-VRASSSGAKTLGAGKKSKAKGPAGRLDEGFKQLFDSTRSIPSMIYSARANPGTPKVSPKAGNMNAAIFP-NSPGEEPVIGHAARIVVVNDARHRLKTDFLQRTVPYFFKLNKQTRKNYSWADVGFVQTPQRF--EDLKDGDPLGNHAVLTFFVSNVSKDGVGGVTSCGQGSLWRVDALRGMAADGRQTVDSVATPDIIGHDCGFRAEVLIEDTHTSLEFFKLQWRSAYVCEPGETLAVCVEQPNTVAWRVKQVFRWHIGAVQLLLKDGVTFMC-ASNMPSILHKMFGLDSLTYYIQAVGGIFIILMPIMFSIFQETPFNTVDLEFVYFFFPYIITATIPTLLAVGWKNVNPNRVLTDEQFWLSTCYVQIWAFALGIWNRITCANPDNAWNLKCPVWPLGTLFFALGISLINTTAHWIYT-GFDPDEQWIFFASFGACCVVMYSIWPMVKLWWPGWVALPSVYHQKFI 4676
+++ N+ F Y++WRA ++ PV IW W+F+ E L +G+ H QR FP R + M+DLV D V A V I++P+AGE++ VM LLGA SQS W + Q LRI ILDEK R V + VY L ++ P V L ++ +++P + + ++Y N DA F+ S +A A+ +E +A L + S A +D G+ F S +P+++Y R + GTP+VSPKAGN+NAAIF + P ++P+IG A IVVVND RH+L FLQRTVPYFF+L+ + + +Y WA V FVQTPQRF + + DPLGNHA + + V N KDG+G V+S G GSLWRV+ALRG DGR+ D D IG GFR+++LIEDTHTS++ F+ W S YV EPGE L++C QPN++AWR+KQV RWH GAVQLL G+++ P++ H+++ D TYY+QA+ G ++LMPI++ + +PF T +F +F PYI+T +PT+++ W +V+ N++ DEQ WLST YVQI+AF +W + C +NAW +K P WPL T+FF ++ + W+ GF Q + + F + + M+++WPMV L GW +PS+Y K +
Sbjct: 222 LRLIMAANVGFSALYLYWRATSTITTIDTYFYNIKYFPVQ-IWAWVFYGVEICLTIGILIGHTQRMFPIKRAIVAMEDLVREDDCVGYNARVAILLPSAGERLDIVMLALLGAMSQSTWRGGNRTTSQMLRIIILDEKRRKGVLNMTAAVYALGTLIRNPEVVTILQAEGIDAENVKGFYDWWKFGGGYARKHLYNDPWLNKACLLLEYMEKHAGNGEDADSIFLLSDMPIDAAAGSKAALHGKDVEEFARSMLQALNIPTPSPDAGXXXXXXXXXXXXXXXXVDAGYVHQFSSNPDLPTLLYYTRKDAGTPRVSPKAGNLNAAIFAVDYPEDDPLIGDAT-IVVVNDCRHQLNPTFLQRTVPYFFELDAEGQ-HYGWARVAFVQTPQRFKPDQMTLDDPLGNHAAVQYDVINRGKDGIGAVSSSGHGSLWRVEALRGADVDGRRYADPTVV-DNIGKTLGFRSQMLIEDTHTSIDMFRHGWTSRYVNEPGEHLSICTHQPNSIAWRIKQVLRWHQGAVQLLFYKGISYTSFGGRFPTLWHRIYAFDQATYYLQAIPGYILLLMPIIYGLTGNSPFETRVADFFLYFTPYIVTGMLPTVISGSWGDVDANKLQRDEQVWLSTTYVQIYAFLSMLWTSLRCQKHENAWAIKAPTWPLFTVFFGQ-VAALGGGLFWVGKYGFRAWAQNLI-SVFASALLCMHALWPMVSLQM-GW-KIPSMYIIKIL 938
BLAST of mRNA_H-paniculata_contig3464.9242.1 vs. uniprot
Match: A0A835YHN4_9STRA (Cellulose synthase, family GT2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHN4_9STRA) HSP 1 Score: 461 bits (1187), Expect = 4.740e-139 Identity = 275/686 (40.09%), Postives = 382/686 (55.69%), Query Frame = 3
Query: 2622 PDPARIGRHPTHIWIKMSAMLNIVFGCAYIWWRAVRS--------------MPDDPVSPIW----NWLFFAGECILMVGVWTSHLQRAFPSIRDLCTMDDLVEVDSSVASEANVCIMVPTAGEKMKNVMHVLLGAYSQSLWPSVVHASRQLRIAILDEKGRHEVRELCEKVYRLAEILVIPSVQQELCSKFDEPCITPKIFMDYFNQMDALDKFVFSKEAHPAFDIAIRME--------NYAGKPT-NKLVRASSSGAKTLGAGKKSKAKG----------PAGRLDEGFKQLFDSTRSIPSMIYSARANPGTPKVSPKAGNMNAAIFP-NSPGEEPVIGHAARIVVVNDARHRLKTDFLQRTVPYFFKLNKQTRKNYSWADVGFVQTPQRFEDLKD-GDPLGNHAVLTFFVSNVSKDGVGGVTSCGQGSLWRVDALRGMAADGRQTVDSVATPDIIGHDCGFRAEVLIEDTHTSLEFFKLQWRSAYVCEPGETLAVCVEQPNTVAWRVKQVFRWHIGAVQLLLKDG---VTFMCASNMPSILHKMFGLDSLTYYIQAVGGIFIILMPIMFSIFQETPFNTVDLEFVYFFFPYIITATIPTLLAVGWKNVNPNRVLTDEQFWLSTCYVQIWAFALGIWNRITCANPDNAWNLKCPVWPLGTLFFALGISLINTTAHWIYTGFDPDE 4553
P R R IW + +LN+ Y++WR +PD+P PIW WLFFA E L++G+ H QR F R + MDDL VDS++ A V + +PTAGEK V+ LLG +Q W + S +RI +LDEK R V L Y+LAE ++ P +Q+ L +F+ I + + + F + ++I ME GK T K S L G KS + P +D G+ + ++S+ +P +IY +R PGTPKVSPKAGNMNAAIFP + P + P+IG + IVVV+D RH+L+ DFLQRTVPYFF+L+K + Y+WA V FVQTPQRF K+ DPLGNHA + + V N KDG+G V S G GSLWRV ALRG+ A+GR D + ++GH GFR+E+LIEDTHTSLE F+ WRS Y+ EP E L+VC QP+ +AWR+KQV RWH GAVQLL G TF + P++ H+++G D TYY+QA+ G +++MPI++ + + PF+ +F F P+I+TA +PT++ V+ +R+ DEQ WLST Y+Q++AF W TCA +AW +K P WPL F+ ++++ IY F +
Sbjct: 43 PQGKRFLRREYLIWA--TVLLNLATAAYYLYWRVTGGSITDIQNGMPGDQWVPDNP-GPIWVRIYAWLFFASEACLIIGIMIGHSQRLFAVQRTVVNMDDLALVDSNITYNARVSVFLPTAGEKPDVVLKALLGCMAQRGWGAASKLS-YMRIIVLDEKKRKGVLALTAAAYKLAECMLNPELQRIL--QFEGVLSLNAIDVFAWWKTGGGHARQFLHDHDLLYEICAIMELMDDIAKNENGGKGTWGKPKDPSKVRHFNLEVGDKSYFEKNRATLEDIIMPNVTIDPGYIKTYESSDLLPRVIYYSRKEPGTPKVSPKAGNMNAAIFPIDYPEQVPLIGDST-IVVVDDCRHQLQPDFLQRTVPYFFELHKPSN-TYTWAKVAFVQTPQRFPFQKEKDDPLGNHAAMQYDVINHGKDGIGAVGSSGHGSLWRVAALRGLDANGRCYADP-SNLRLVGHKLGFRSEMLIEDTHTSLEMFRAGWRSVYINEPNENLSVCTHQPDNIAWRIKQVLRWHQGAVQLLWFKGPWYTTFSPCAQYPTMWHRLYGFDQCTYYMQAIPGYMLLVMPIVYGVTGQAPFSATIFDFFVRFIPFIVTAVLPTVILGNRPGVDMDRLSRDEQVWLSTTYIQMYAFFSMTWQIFTCAKAGDAWTVKAPTWPLFVAFYGEFLAILGGLFWLIYNNFQNNR 719 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3464.9242.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3464.9242.1 >prot_H-paniculata_contig3464.9242.1 ID=prot_H-paniculata_contig3464.9242.1|Name=mRNA_H-paniculata_contig3464.9242.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1472bp MPPNNGNGASGKGSKASDVATSATNALLILIVLLFVLFGLWVEVFAIPAFback to top mRNA from alignment at H-paniculata_contig3464:2401..15250+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3464.9242.1 ID=mRNA_H-paniculata_contig3464.9242.1|Name=mRNA_H-paniculata_contig3464.9242.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=12850bp|location=Sequence derived from alignment at H-paniculata_contig3464:2401..15250+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3464:2401..15250+ >mRNA_H-paniculata_contig3464.9242.1 ID=mRNA_H-paniculata_contig3464.9242.1|Name=mRNA_H-paniculata_contig3464.9242.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=8832bp|location=Sequence derived from alignment at H-paniculata_contig3464:2401..15250+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |