mRNA_H-paniculata_contig3458.9229.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3458.9229.1 vs. uniprot
Match: D8LQ80_ECTSI (Histone H1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ80_ECTSI) HSP 1 Score: 111 bits (278), Expect = 1.770e-27 Identity = 57/82 (69.51%), Postives = 67/82 (81.71%), Query Frame = 1
Query: 67 ITATMPTYSEMVFQAIKELKERNGSSLQAIKKYIVTTYPEVATKFAPHQLRSALKKGTETGKFVKVKSSYKLSAEAKKPPPK 312
+ +T PTY+ MVF AIK LKERNGSS+QAIKK I TYP + F PHQ+RSALKKG E+GKF+K+K+SYKLSAEAKKP PK
Sbjct: 1 MASTKPTYNAMVFDAIKTLKERNGSSIQAIKKSITATYPTL--NFTPHQMRSALKKGVESGKFIKMKASYKLSAEAKKPAPK 80
BLAST of mRNA_H-paniculata_contig3458.9229.1 vs. uniprot
Match: D7G4I5_ECTSI (H15 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4I5_ECTSI) HSP 1 Score: 107 bits (267), Expect = 1.380e-25 Identity = 56/78 (71.79%), Postives = 62/78 (79.49%), Query Frame = 1
Query: 70 TATMPTYSEMVFQAIKELKERNGSSLQAIKKYIVTTYPEVATKFAPHQLRSALKKGTETGKFVKVKSSYKLSAEAKKP 303
T PTYS MVF AIK LKER GSSL A+KK I+ TYP + F PHQ+RSALKKGTE+GKF+KVKSSYKLS EAKKP
Sbjct: 3 TTAKPTYSVMVFDAIKALKERGGSSLPALKKQIMATYPSL--NFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKP 78
BLAST of mRNA_H-paniculata_contig3458.9229.1 vs. uniprot
Match: D8LQ75_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ75_ECTSI) HSP 1 Score: 107 bits (266), Expect = 3.000e-25 Identity = 57/72 (79.17%), Postives = 60/72 (83.33%), Query Frame = 1
Query: 97 MVFQAIKELKERNGSSLQAIKKYIVTTYPEVATKFAPHQLRSALKKGTETGKFVKVKSSYKLSAEAKKPPPK 312
MVF AIK LKERNGSS+QAIKK I TYP A F PHQ+RSALKKG ETGKF+KVKSSYKLSAEAKKP PK
Sbjct: 1 MVFDAIKSLKERNGSSIQAIKKSITATYP--ALNFTPHQMRSALKKGVETGKFIKVKSSYKLSAEAKKPVPK 70
BLAST of mRNA_H-paniculata_contig3458.9229.1 vs. uniprot
Match: A0A6H5KST0_9PHAE (H15 domain-containing protein n=6 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KST0_9PHAE) HSP 1 Score: 102 bits (254), Expect = 1.050e-23 Identity = 54/72 (75.00%), Postives = 60/72 (83.33%), Query Frame = 1
Query: 97 MVFQAIKELKERNGSSLQAIKKYIVTTYPEVATKFAPHQLRSALKKGTETGKFVKVKSSYKLSAEAKKPPPK 312
MVF AIK LKERNGSS+QAIKK I TYP + F PHQ+RSALKKG E+GKFVK+K+SYKLSAEAKKP PK
Sbjct: 1 MVFDAIKTLKERNGSSIQAIKKSITATYPTL--NFTPHQMRSALKKGVESGKFVKMKASYKLSAEAKKPAPK 70
BLAST of mRNA_H-paniculata_contig3458.9229.1 vs. uniprot
Match: D8LMF1_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF1_ECTSI) HSP 1 Score: 101 bits (252), Expect = 2.250e-23 Identity = 54/76 (71.05%), Postives = 60/76 (78.95%), Query Frame = 1
Query: 79 MPTYSEMVFQAIKELKERNGSSLQAIKKYIVTTYPEVATKFAPHQLRSALKKGTETGKFVKVKSSYKLSAEAKKPP 306
MPTYSEM AI LKERNGSS+ AIKK+I TYP + F PHQLR ALKKGTETG F+KVK+SYK+S EAKKPP
Sbjct: 1 MPTYSEMAKVAILALKERNGSSVPAIKKHIQATYPTL--NFLPHQLRGALKKGTETGTFIKVKASYKVSPEAKKPP 74
BLAST of mRNA_H-paniculata_contig3458.9229.1 vs. uniprot
Match: A0A6H5KCU1_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCU1_9PHAE) HSP 1 Score: 103 bits (258), Expect = 3.330e-23 Identity = 53/76 (69.74%), Postives = 61/76 (80.26%), Query Frame = 1
Query: 82 PTYSEMVFQAIKELKERNGSSLQAIKKYIVTTYPEVATKFAPHQLRSALKKGTETGKFVKVKSSYKLSAEAKKPPP 309
PTY+ MVF AIK LKERNGSS+QAIKK I TYP + F PHQ+R ALKKG E+GKF+K+K+SYKLS EAKKP P
Sbjct: 99 PTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTL--NFTPHQMRGALKKGVESGKFIKMKASYKLSPEAKKPAP 172
BLAST of mRNA_H-paniculata_contig3458.9229.1 vs. uniprot
Match: A0A6H5JHR9_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHR9_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 2.830e-22 Identity = 51/69 (73.91%), Postives = 57/69 (82.61%), Query Frame = 1
Query: 97 MVFQAIKELKERNGSSLQAIKKYIVTTYPEVATKFAPHQLRSALKKGTETGKFVKVKSSYKLSAEAKKP 303
MVF AIK LKER GSSL A+KK I+ TYP + F PHQ+RSALKKGTE+GKF+KVKSSYKLS EAKKP
Sbjct: 1 MVFDAIKALKERGGSSLPALKKQIMATYPSL--NFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKP 67
BLAST of mRNA_H-paniculata_contig3458.9229.1 vs. uniprot
Match: D8LJB8_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJB8_ECTSI) HSP 1 Score: 92.0 bits (227), Expect = 1.760e-18 Identity = 47/75 (62.67%), Postives = 58/75 (77.33%), Query Frame = 1
Query: 79 MPTYSEMVFQAIKELKERNGSSLQAIKKYIVTTYPEVATKFAPHQLRSALKKGTETGKFVKVKSSYKLSAEAKKP 303
MPTY EM +A+K LKERNGSSL AIKK+I +YP + F H +RSALKKG E+GKF+KVK+SYKLSA ++P
Sbjct: 1 MPTYDEMTIEAVKALKERNGSSLFAIKKHITASYPSLT--FTAHFMRSALKKGVESGKFIKVKNSYKLSAYRQEP 73
BLAST of mRNA_H-paniculata_contig3458.9229.1 vs. uniprot
Match: A0A7S2Y1F8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1F8_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 4.300e-18 Identity = 50/82 (60.98%), Postives = 57/82 (69.51%), Query Frame = 1
Query: 79 MPTYSEMVFQAIKELKERNGSSLQAIKKYIVTTYPEVATKFAPHQLRSALKKGTETGKFVKVKSSYKLSAEAKKPPPKKVVK 324
MP+Y +M AI LK+R GSSL AIK YI YP V KF PH LR+ALKK E GK +KVK+SYKLSA+ KKP KKV K
Sbjct: 1 MPSYYDMAKAAILALKDRTGSSLPAIKAYITANYPSV--KFLPHALRAALKKAVEAGKLIKVKASYKLSADEKKP--KKVAK 78
BLAST of mRNA_H-paniculata_contig3458.9229.1 vs. uniprot
Match: A0A6H5JIM8_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM8_9PHAE) HSP 1 Score: 90.9 bits (224), Expect = 4.480e-18 Identity = 47/70 (67.14%), Postives = 55/70 (78.57%), Query Frame = 1
Query: 79 MPTYSEMVFQAIKELKERNGSSLQAIKKYIVTTYPEVATKFAPHQLRSALKKGTETGKFVKVKSSYKLSA 288
MPTY EM +A+K LKERNGSSL AIKK+I +YP + F H LRSALKKG E+GKF+KVK+SYKLSA
Sbjct: 1 MPTYDEMTVEAVKALKERNGSSLFAIKKHITASYPSLT--FTGHFLRSALKKGVESGKFIKVKNSYKLSA 68 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3458.9229.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3458.9229.1 >prot_H-paniculata_contig3458.9229.1 ID=prot_H-paniculata_contig3458.9229.1|Name=mRNA_H-paniculata_contig3458.9229.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=172bp MPTYSEMVFQAIKELKERNGSSLQAIKKYIVTTYPEVATKFAPHQLRSALback to top mRNA from alignment at H-paniculata_contig3458:7655..9649- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3458.9229.1 ID=mRNA_H-paniculata_contig3458.9229.1|Name=mRNA_H-paniculata_contig3458.9229.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1995bp|location=Sequence derived from alignment at H-paniculata_contig3458:7655..9649- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3458:7655..9649- >mRNA_H-paniculata_contig3458.9229.1 ID=mRNA_H-paniculata_contig3458.9229.1|Name=mRNA_H-paniculata_contig3458.9229.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1032bp|location=Sequence derived from alignment at H-paniculata_contig3458:7655..9649- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |