mRNA_H-paniculata_contig34542.9220.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig34542.9220.1 vs. uniprot
Match: D7G688_ECTSI (ADP,ATP carrier protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G688_ECTSI) HSP 1 Score: 153 bits (386), Expect = 7.810e-42 Identity = 81/98 (82.65%), Postives = 88/98 (89.80%), Query Frame = 1
Query: 7 WLQVYGVLPAATVFMLVYSKVSTLLSKRALFYATAMPFFAFYLFFKLVMYPMRDILHPS-AETAGSAGVPEGMSYLVNLYRHWTFALFYVVSELYSSV 297
+L+VYGVLPAATVFML YSKVSTLLSKRALFYATA+PFF FYLFFKLVMYPMRD LHPS A G+PEG+SY+VNLYR+WTFALFYVVSELYSSV
Sbjct: 64 FLKVYGVLPAATVFMLAYSKVSTLLSKRALFYATALPFFVFYLFFKLVMYPMRDSLHPSEAAVEALVGLPEGISYVVNLYRNWTFALFYVVSELYSSV 161
BLAST of mRNA_H-paniculata_contig34542.9220.1 vs. uniprot
Match: A0A7S3UYU3_HETAK (ADP,ATP carrier protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UYU3_HETAK) HSP 1 Score: 107 bits (266), Expect = 5.960e-25 Identity = 56/97 (57.73%), Postives = 74/97 (76.29%), Query Frame = 1
Query: 7 WLQVYGVLPAATVFMLVYSKVSTLLSKRALFYATAMPFFAFYLFFKLVMYPMRDILHPSAETAGSAGVPEGMSYLVNLYRHWTFALFYVVSELYSSV 297
+L++YGVLPAAT+FML YSK ST+LSK LFY TA PFF FYL F L +YP+R LHP+ G+ +P G++YL + +WTFAL+YVVSE+YS++
Sbjct: 146 FLKLYGVLPAATLFMLGYSKASTVLSKPRLFYGTAAPFFLFYLLFDLAIYPLRGKLHPAP---GTLRLPGGLAYLSKILENWTFALYYVVSEVYSAM 239
BLAST of mRNA_H-paniculata_contig34542.9220.1 vs. uniprot
Match: W7TBM9_9STRA (ADP,ATP carrier protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TBM9_9STRA) HSP 1 Score: 106 bits (264), Expect = 1.290e-24 Identity = 59/97 (60.82%), Postives = 73/97 (75.26%), Query Frame = 1
Query: 7 WLQVYGVLPAATVFMLVYSKVSTLLSKRALFYATAMPFFAFYLFFKLVMYPMRDILHPSAETAGSAGVPEGMSYLVNLYRHWTFALFYVVSELYSSV 297
+L+VYGVLPAA F + YSK+S LSK AL+YA PFF FYL F LV+YP R LHP+A TA S +G+SYL+ LY +WTFAL+Y+VSE+YSSV
Sbjct: 174 FLKVYGVLPAAAAFTVAYSKMSNALSKDALYYALVAPFFLFYLLFDLVIYPRRHQLHPTA-TATSF---QGLSYLLGLYNNWTFALYYIVSEIYSSV 266
BLAST of mRNA_H-paniculata_contig34542.9220.1 vs. uniprot
Match: A0A7S4PLB4_GUITH (ADP,ATP carrier protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PLB4_GUITH) HSP 1 Score: 97.4 bits (241), Expect = 2.390e-22 Identity = 52/97 (53.61%), Postives = 69/97 (71.13%), Query Frame = 1
Query: 7 WLQVYGVLPAATVFMLVYSKVSTLLSKRALFYATAMPFFAFYLFFKLVMYPMRDILHPSAETAGSAGVPEGMSYLVNLYRHWTFALFYVVSELYSSV 297
+L+VYGVLPAAT+FML YS++S + SK+ALFY TA+PF AFY F +YP R+ILHP + E Y V+L +W+++LFYVVSEL+ SV
Sbjct: 126 FLKVYGVLPAATMFMLYYSRISNIFSKKALFYVTALPFMAFYAVFAYFIYPNREILHPPIPQ----DLDERWKYAVSLLSNWSYSLFYVVSELWGSV 218
BLAST of mRNA_H-paniculata_contig34542.9220.1 vs. uniprot
Match: A0A2H0VPK6_9BACT (ADP,ATP carrier protein n=1 Tax=Chlamydiae bacterium CG10_big_fil_rev_8_21_14_0_10_35_9 TaxID=1973935 RepID=A0A2H0VPK6_9BACT) HSP 1 Score: 98.2 bits (243), Expect = 7.590e-22 Identity = 49/98 (50.00%), Postives = 71/98 (72.45%), Query Frame = 1
Query: 7 WLQVYGVLPAATVFMLVYSKVSTLLSKRALFYATAMPFFAFYLFFKLVMYPMRDILHPSAETAGSAGV-PEGMSYLVNLYRHWTFALFYVVSELYSSV 297
+L+V+GVLP A +FML+Y+K+S LSK LFYAT PF F+ F ++YP+RD+LHP++ G+ PEG L+ L R+WTF+LFY+++EL+ SV
Sbjct: 65 FLKVWGVLPFAVLFMLIYAKLSNKLSKEKLFYATITPFLVFFAAFAFIIYPLRDVLHPTSAADTLQGILPEGFKGLIALLRNWTFSLFYIMAELWGSV 162
BLAST of mRNA_H-paniculata_contig34542.9220.1 vs. uniprot
Match: L1IL04_GUITC (ADP,ATP carrier protein n=3 Tax=Guillardia theta TaxID=55529 RepID=L1IL04_GUITC) HSP 1 Score: 97.4 bits (241), Expect = 1.520e-21 Identity = 52/97 (53.61%), Postives = 69/97 (71.13%), Query Frame = 1
Query: 7 WLQVYGVLPAATVFMLVYSKVSTLLSKRALFYATAMPFFAFYLFFKLVMYPMRDILHPSAETAGSAGVPEGMSYLVNLYRHWTFALFYVVSELYSSV 297
+L+VYGVLPAAT+FML YS++S + SK+ALFY TA+PF AFY F +YP R+ILHP + E Y V+L +W+++LFYVVSEL+ SV
Sbjct: 126 FLKVYGVLPAATMFMLYYSRISNIFSKKALFYVTALPFMAFYAVFAYFIYPNREILHPPIPQ----DLDERWKYAVSLLSNWSYSLFYVVSELWGSV 218
BLAST of mRNA_H-paniculata_contig34542.9220.1 vs. uniprot
Match: A0A6G4ZQ23_9BACT (ADP,ATP carrier protein n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A6G4ZQ23_9BACT) HSP 1 Score: 97.1 bits (240), Expect = 1.960e-21 Identity = 50/99 (50.51%), Postives = 74/99 (74.75%), Query Frame = 1
Query: 7 WLQVYGVLPAATVFMLVYSKVSTLLSKRALFYATAMPFFAFYLFFKLVMYPMRDILHPSAETAGS--AGVPEGMSYLVNLYRHWTFALFYVVSELYSSV 297
+L+V+GVLP A +FML+Y+K+S +LSK LFY T + F F++ FKLV+YP RD LHP+ E A A +P G S ++ ++R+WTF+LFY++SEL+ S+
Sbjct: 65 FLKVWGVLPIAILFMLIYAKLSNILSKTKLFYTTIISFLVFFVLFKLVLYPARDFLHPN-ELADKLQAALPGGFSGMIAIFRNWTFSLFYIMSELWGSM 162
BLAST of mRNA_H-paniculata_contig34542.9220.1 vs. uniprot
Match: A0A448ZK66_9STRA (ADP,ATP carrier protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZK66_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 2.090e-21 Identity = 52/102 (50.98%), Postives = 71/102 (69.61%), Query Frame = 1
Query: 7 WLQVYGVLPAATVFMLVYSKVSTLLSKRALFYATAMPFFAFYLFFKLVMYPMRDILHPSAETAGSA-----GVPEGMSYLVNLYRHWTFALFYVVSELYSSV 297
+L++YGVLPAAT F+ +YSK+S +LSK+ LFY+T +PFF F+ F V+YP D LHPS + S G G+S L ++ HWT ALFYV++E+YSSV
Sbjct: 127 FLKIYGVLPAATAFIALYSKMSDVLSKKTLFYSTCIPFFIFFALFDAVIYPNADRLHPSLASVESFLGIANGSEGGLSILASIVAHWTSALFYVMAEIYSSV 228
BLAST of mRNA_H-paniculata_contig34542.9220.1 vs. uniprot
Match: A0A6M1ZTJ2_9BACT (ADP,ATP carrier protein n=1 Tax=Candidatus Anoxychlamydiales bacterium TaxID=2705072 RepID=A0A6M1ZTJ2_9BACT) HSP 1 Score: 96.7 bits (239), Expect = 2.680e-21 Identity = 51/98 (52.04%), Postives = 68/98 (69.39%), Query Frame = 1
Query: 7 WLQVYGVLPAATVFMLVYSKVSTLLSKRALFYATAMPFFAFYLFFKLVMYPMRDILHPSAETAG-SAGVPEGMSYLVNLYRHWTFALFYVVSELYSSV 297
+L++YGVLP A +FML+YSK+S LSK LFYAT PF F+ F LV+YP +D LHP A A +P G L+ ++R+W F+LFYV+SEL+ SV
Sbjct: 64 FLKLYGVLPGAIIFMLIYSKLSNKLSKPGLFYATISPFIIFFALFALVLYPAKDFLHPHALADKLQAALPSGFMGLIAVFRNWIFSLFYVMSELWGSV 161
BLAST of mRNA_H-paniculata_contig34542.9220.1 vs. uniprot
Match: A0A1E7EXX4_9STRA (ADP,ATP carrier protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EXX4_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 4.140e-21 Identity = 50/102 (49.02%), Postives = 71/102 (69.61%), Query Frame = 1
Query: 7 WLQVYGVLPAATVFMLVYSKVSTLLSKRALFYATAMPFFAFYLFFKLVMYPMRDILHPSAETAG-----SAGVPEGMSYLVNLYRHWTFALFYVVSELYSSV 297
+L++YGVLPAAT F+ +YSK+S L K+ LFY T +PFF F++ F +++YP D LHP+ + S+G GM+ L ++ HWT ALFYVV+E+YSSV
Sbjct: 218 FLKIYGVLPAATAFIALYSKMSDSLGKKTLFYTTCIPFFIFFIIFDMLIYPNTDWLHPTLSSVETFLGISSGGSGGMTVLASIIAHWTSALFYVVAEIYSSV 319 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig34542.9220.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig34542.9220.1 >prot_H-paniculata_contig34542.9220.1 ID=prot_H-paniculata_contig34542.9220.1|Name=mRNA_H-paniculata_contig34542.9220.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=99bp LLWLQVYGVLPAATVFMLVYSKVSTLLSKRALFYATAMPFFAFYLFFKLVback to top mRNA from alignment at H-paniculata_contig34542:1801..2097+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig34542.9220.1 ID=mRNA_H-paniculata_contig34542.9220.1|Name=mRNA_H-paniculata_contig34542.9220.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=297bp|location=Sequence derived from alignment at H-paniculata_contig34542:1801..2097+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig34542:1801..2097+ >mRNA_H-paniculata_contig34542.9220.1 ID=mRNA_H-paniculata_contig34542.9220.1|Name=mRNA_H-paniculata_contig34542.9220.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=594bp|location=Sequence derived from alignment at H-paniculata_contig34542:1801..2097+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |