mRNA_H-paniculata_contig345.9203.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig345.9203.1 vs. uniprot
Match: W4FKI4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces TaxID=100860 RepID=W4FKI4_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 2.580e-17 Identity = 38/74 (51.35%), Postives = 53/74 (71.62%), Query Frame = 2
Query: 290 GYALLVASGVFFVTTLYAIVFSKLMPP----MGHPILDAIREDSHYCYLVPLTVYPSCAALYMSWVSLKFFRHN 499
GY ++ S +FF+T +Y IV +K++PP P++DAIR D HYCYLVPLT+ + A+Y+SWVSLK+FR N
Sbjct: 16 GYVIVSLSAIFFITFMYLIVVAKVLPPPTPGRSFPMMDAIRGDQHYCYLVPLTIPVAFIAMYVSWVSLKYFRQN 89
BLAST of mRNA_H-paniculata_contig345.9203.1 vs. uniprot
Match: A0A1X2H1N3_SYNRA (Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y-domain-containing protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2H1N3_SYNRA) HSP 1 Score: 85.9 bits (211), Expect = 5.410e-17 Identity = 42/93 (45.16%), Postives = 58/93 (62.37%), Query Frame = 2
Query: 221 PAAVDRPLSAEEEESARIRTYCCGYALLVASGVFFVTTLYAIVFSKLMPPMGHPILDAIREDSHYCYLVPLTVYPSCAALYMSWVSLKFFRHN 499
PA RP S +A T+ GYALL A+ + F++TLYAI+ SK MP G P+LD I+ D +YC LVP+T + + +W+ +KFFRHN
Sbjct: 25 PAHARRP-SLTTMAAAENDTHLWGYALLAATAIMFLSTLYAIIGSKFMPDTGVPVLDWIKHDEYYCLLVPITALAAIYFIMWNWMGMKFFRHN 116
BLAST of mRNA_H-paniculata_contig345.9203.1 vs. uniprot
Match: A0A2P6NM70_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NM70_9EUKA) HSP 1 Score: 80.9 bits (198), Expect = 2.150e-15 Identity = 33/73 (45.21%), Postives = 49/73 (67.12%), Query Frame = 2
Query: 278 TYCCGYALLVASGVFFVTTLYAIVFSKLMPPMGHPILDAIREDSHYCYLVPLTVYPSCAALYMSWVSLKFFRH 496
T CCG LL FF +++ I SK++P G+P+LD IRED HYCYL+PL++ + + +W+++KFFRH
Sbjct: 23 TGCCGICLLFLVFTFFGASVFTIYISKVLPETGNPLLDTIREDHHYCYLIPLSLMTTYLFFFNNWLAMKFFRH 95
BLAST of mRNA_H-paniculata_contig345.9203.1 vs. uniprot
Match: A0A1V9YP10_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YP10_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 3.220e-15 Identity = 35/74 (47.30%), Postives = 53/74 (71.62%), Query Frame = 2
Query: 290 GYALLVASGVFFVTTLYAIVFSKLMP----PMGHPILDAIREDSHYCYLVPLTVYPSCAALYMSWVSLKFFRHN 499
GY ++ S FF+T LY IV +KL+P P+ P+++ I++D +YCYL+PLT+ A+Y++WVSLK+FRHN
Sbjct: 26 GYVIVGLSFTFFMTFLYLIVVAKLLPAATDPLRFPMMETIQQDHYYCYLIPLTIPAGFIAMYVNWVSLKYFRHN 99
BLAST of mRNA_H-paniculata_contig345.9203.1 vs. uniprot
Match: A0A067BPD6_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067BPD6_SAPPC) HSP 1 Score: 80.1 bits (196), Expect = 4.450e-15 Identity = 36/74 (48.65%), Postives = 51/74 (68.92%), Query Frame = 2
Query: 290 GYALLVASGVFFVTTLYAIVFSKLMPPMGHP----ILDAIREDSHYCYLVPLTVYPSCAALYMSWVSLKFFRHN 499
GY ++ S FF+T LY IV +KL+PP P +++ IR+D YCYL+PLT+ A+Y++WVSLK+FRHN
Sbjct: 26 GYVIVGLSFAFFMTFLYLIVVAKLLPPSDDPARFPMMETIRQDHFYCYLIPLTIPAGFIAMYINWVSLKYFRHN 99
BLAST of mRNA_H-paniculata_contig345.9203.1 vs. uniprot
Match: A0A1Y3MPZ7_PIRSE (Uncharacterized protein (Fragment) n=1 Tax=Piromyces sp. (strain E2) TaxID=73868 RepID=A0A1Y3MPZ7_PIRSE) HSP 1 Score: 77.4 bits (189), Expect = 2.360e-14 Identity = 31/74 (41.89%), Postives = 50/74 (67.57%), Query Frame = 2
Query: 278 TYCCGYALLVASGVFFVTTLYAIVFSKLMPPMGHPILDAIREDSHYCYLVPLTVYPSCAALYMSWVSLKFFRHN 499
T+ G+ LL + FV +Y++VFS+ M G+P+LD I+ D++YCYL+PL + ++++W S+KFFRHN
Sbjct: 4 THMAGWVLLFITYCVFVMGMYSVVFSRFMADTGNPVLDGIKNDNYYCYLIPLLIVIIYLFIFVNWFSMKFFRHN 77
BLAST of mRNA_H-paniculata_contig345.9203.1 vs. uniprot
Match: A0A6A4ZJ79_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZJ79_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 4.380e-14 Identity = 38/85 (44.71%), Postives = 53/85 (62.35%), Query Frame = 2
Query: 290 GYALLVASGVFFVTTL-----------YAIVFSKLMPP----MGHPILDAIREDSHYCYLVPLTVYPSCAALYMSWVSLKFFRHN 499
GY ++ S +FF+T + Y IV +K++PP P++DAIR D HYCYLVPLT+ + A+Y+SWVSLK+FR N
Sbjct: 16 GYVIVSLSAIFFITFMQVHLSSDVVIEYLIVVAKVLPPPTPGRSFPMMDAIRGDQHYCYLVPLTIPVAFIAMYVSWVSLKYFRQN 100
BLAST of mRNA_H-paniculata_contig345.9203.1 vs. uniprot
Match: A0A1Y2GU76_9FUNG (Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y-domain-containing protein n=2 Tax=Mortierellaceae TaxID=4854 RepID=A0A1Y2GU76_9FUNG) HSP 1 Score: 75.1 bits (183), Expect = 5.220e-13 Identity = 32/74 (43.24%), Postives = 49/74 (66.22%), Query Frame = 2
Query: 278 TYCCGYALLVASGVFFVTTLYAIVFSKLMPPMGHPILDAIREDSHYCYLVPLTVYPSCAALYMSWVSLKFFRHN 499
TY GY L ++ + F T++YA+V S MP G+ LD I++DSHYC L+P+T+ + A+ +W+ +K FRHN
Sbjct: 48 TYLWGYLLFFSTMIGFTTSMYALVASNYMPMTGNKTLDWIKQDSHYCMLLPVTIPVTVLAVLFNWLGMKLFRHN 121
BLAST of mRNA_H-paniculata_contig345.9203.1 vs. uniprot
Match: A0A8J4PUN0_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PUN0_9MYCE) HSP 1 Score: 78.2 bits (191), Expect = 5.930e-13 Identity = 32/75 (42.67%), Postives = 52/75 (69.33%), Query Frame = 2
Query: 275 RTYCCGYALLVASGVFFVTTLYAIVFSKLMPPMGHPILDAIREDSHYCYLVPLTVYPSCAALYMSWVSLKFFRHN 499
RT G+ +L + +FF+++ Y + FSKL+P G+ +LD I+ D +YC+LVP+ + + +Y +W+SLKFFRHN
Sbjct: 175 RTAFYGWIILFCTFIFFISSTYCLFFSKLLPDTGNKVLDFIKYDWYYCFLVPVLIPVTIITVYFNWLSLKFFRHN 249
BLAST of mRNA_H-paniculata_contig345.9203.1 vs. uniprot
Match: A0A2P6MZZ5_9EUKA (Uncharacterized protein n=2 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MZZ5_9EUKA) HSP 1 Score: 79.7 bits (195), Expect = 8.500e-13 Identity = 32/73 (43.84%), Postives = 50/73 (68.49%), Query Frame = 2
Query: 278 TYCCGYALLVASGVFFVTTLYAIVFSKLMPPMGHPILDAIREDSHYCYLVPLTVYPSCAALYMSWVSLKFFRH 496
T CCG LL +FF ++++I SKL+P G+ +LD IRED HYC+L+PL++ + + +W+++KFFRH
Sbjct: 344 TGCCGICLLFCVFIFFSASIFSIYVSKLLPETGNIVLDTIREDEHYCFLIPLSLMTTYLFFFNNWLAMKFFRH 416 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig345.9203.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig345.9203.1 >prot_H-paniculata_contig345.9203.1 ID=prot_H-paniculata_contig345.9203.1|Name=mRNA_H-paniculata_contig345.9203.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=146bp MTMAGRRSRDNFLPPAMQTATTVGSGTARLVRDFHFHDNENVASSLRRQLback to top mRNA from alignment at H-paniculata_contig345:33147..36016- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig345.9203.1 ID=mRNA_H-paniculata_contig345.9203.1|Name=mRNA_H-paniculata_contig345.9203.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2870bp|location=Sequence derived from alignment at H-paniculata_contig345:33147..36016- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig345:33147..36016- >mRNA_H-paniculata_contig345.9203.1 ID=mRNA_H-paniculata_contig345.9203.1|Name=mRNA_H-paniculata_contig345.9203.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=876bp|location=Sequence derived from alignment at H-paniculata_contig345:33147..36016- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |