mRNA_H-paniculata_contig34496.9199.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig34496.9199.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE) HSP 1 Score: 219 bits (558), Expect = 2.820e-57 Identity = 124/336 (36.90%), Postives = 190/336 (56.55%), Query Frame = -1
Query: 449 LGGVHAGDSPAASPARFFAWDQNSLGMTGPLDRYTVVEFKQRYETVIQVKHGLQRHLAQLSLHCTDLFHHEVSRHRA--PGAETPLSLRRAVKLNHVFPVLLLSTDAQFSRRDRFLAVKRGGISVVLPWLMASTEAAAARRQWTARSTSTVDRYRKAAAACRHKGGISNTVRALLSDELEPANEDTFGKVSPKFGQEDAPALAAAKAAALAASLDFLAADGAAAWRPDDEYNPETLIAVVKSKNALSAAGNDGLRFSHLQCILNTLGGMEGFRPVVGPFWRRSME*PDAFPPEFWECFLQKTSRRSGRSAARYAWDLRCGVLWLLRWSGNTSRNWR 1450
+GG+ S A + W+QNS G+ LD T+ + R+ETV ++K L A+L H +L + E++ R P + TPLSL RA+KL ++ P LL S D + +R++R+ A+KRG IS LPWLM +AA++R + + + D++++A ACRH GG+ + RALL++ P N++T+ ++ KF ED+ A+ A A A+A S+ A WRP++E++P+ LI V+ S+++ S AGNDG RFSHL+ I NT G E F + WRR + P+ FPPEFW + Q + G G+ W + T R W+
Sbjct: 311 VGGMSEESSEAGM---LYGWNQNSPGVGPALDEVTMEDLTLRFETVKKIKPWLASDHARLQTHALNLVNKELAERRELPPRSGTPLSLLRAIKLWYLLPALLHSFDGRITRKERYKALKRGDISSTLPWLMEYAKAASSRSRGPVQEETQEDKFKRAEQACRHSGGVKDAARALLAEPRSPGNDETWERLKAKFPLEDSAAVEQAVADAIAESITEEENGSAPRWRPEEEFDPQVLIEVINSRSSNSGAGNDGQRFSHLKSITNTKIGREDFCGAMSSLWRRLVNDPNTFPPEFWTLWKQSSLIALGEKCRPVC----IGMTWRRLIAAGTVRQWK 639
BLAST of mRNA_H-paniculata_contig34496.9199.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE) HSP 1 Score: 218 bits (555), Expect = 4.950e-57 Identity = 130/364 (35.71%), Postives = 201/364 (55.22%), Query Frame = -1
Query: 449 GCGARYDGQPVLEYVVQEDPSSREKVELGGVHAGDSP-AASPARFFAWDQNSLGMTGPLDRYTVVEFKQRYETVIQVKHGLQRHLAQLSLHCTDLFHHEVSRHRAPGAET--PLSLRRAVKLNHVFPVLLLSTDAQFSRRDRFLAVKRGGISVVLPWLMASTEAAAARRQWTARSTSTVDRYRKAAAACRHKGGISNTVRALLSDELEPANEDTFGKVSPKFGQEDAPALAAAKAAALAASLDFLAADGAAAWRPDDEYNPETLIAVVKSKNALSAAGNDGLRFSHLQCILNTLGGMEGFRPVVGPFWRRSME*PDAFPPEFWECFLQKTSRRSGRSAARYAWDLRCGVLWLLRWSGNTSRNWR 1531
GCGA++ + LE VQ DP + + E D P A P + W+Q+S G+ LD ++ + R++TV +V+ A+L H L + +++ + T PLS R +KL ++ P +L S D + +R+ R+ ++KRG IS VLPWL+ T+AA+AR + AR + D++++AA ACRH GG+ + RALL+D+ P N++T+ ++ KF ED + A A A+AAS A WRP+ E++P+ L+ V+ S+++ S AGNDG RFSHL+ I+NT G E F + WRR + P+AFPPEFW + Q + G G+ W + T R W+
Sbjct: 112 GCGAQHSRRDSLEAAVQADPGLQLRAERLIRGLNDEPHGARP--LYIWNQDSPGIGPALDDVSMDDLSLRFQTVKKVQPRFASDHARLQTHVLHLVNKQLAEGGGASSATGTPLSTIRVIKLWYLLPGILHSFDGRIARKKRYNSLKRGDISSVLPWLIEYTKAASARSRGPAREDTPDDKFKRAARACRHSGGVKDAARALLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVC----IGMTWRRLIAAGTVREWK 469
BLAST of mRNA_H-paniculata_contig34496.9199.1 vs. uniprot
Match: A0A6H5KKQ2_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ2_9PHAE) HSP 1 Score: 210 bits (534), Expect = 2.620e-55 Identity = 126/363 (34.71%), Postives = 196/363 (53.99%), Query Frame = -1
Query: 449 GCGARYDGQPVLEYVVQEDPSSREKVELGGVHAGDSPAASPARFFAWDQNSLGMTGPLDRYTVVEFKQRYETVIQVKHGLQRHLAQLSLHCTDLFHHEVSRHRAPGAET--PLSLRRAVKLNHVFPVLLLSTDAQFSRRDRFLAVKRGGISVVLPWLMASTEAAAARRQWTARSTSTVDRYRKAAAACRHKGGISNTVRALLSDELEPANEDTFGKVSPKFGQEDAPALAAAKAAALAASLDFLAADGAAAWRPDDEYNPETLIAVVKSKNALSAAGNDGLRFSHLQCILNTLGGMEGFRPVVGPFWRRSME*PDAFPPEFWECFLQKTSRRSGRSAARYAWDLRCGVLWLLRWSGNTSRNWR 1531
GCGA++ + LE VQ DP + + E D P + + + W+Q+S G+ LD ++ + R++TV +V+ A+L H L + +++ + T PLS R +KL ++ P +L D + +R+ R+ ++KR IS VLPWL+ T+AA+AR + AR D++++AA ACRH GG+ + RALL+D+ P N++T+ ++ KF ED + A A A+AAS A WRP+ E++P+ L+ VV +++ S AGNDG RFSHL+ I+NT G E F + WRR ++ P AFPPEFW Q + G G+ W + T R W+
Sbjct: 111 GCGAQHSRRDSLEAAVQADPGLQLRAESLIRGLNDEPHGARS-LYIWNQDSPGIGPALDDVSMDDLSLRFQTVKKVQPRFASDHARLQTHVLHLVNKQLAEGGGASSATGTPLSTIRVIKLWYLLPGILHFFDGRIARKHRYKSLKREDISSVLPWLIEYTKAASARSRGPAREDRPDDKFKRAAQACRHSGGVKDAARALLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVVNRRSSNSGAGNDGPRFSHLKSIVNTKIGREEFSNAMSSLWRRLIKDPHAFPPEFWTLLKQSSLIALGEKCRPVC----IGMTWRRLIAAGTVREWK 468
BLAST of mRNA_H-paniculata_contig34496.9199.1 vs. uniprot
Match: A0A6H5KA96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA96_9PHAE) HSP 1 Score: 207 bits (526), Expect = 5.660e-54 Identity = 126/364 (34.62%), Postives = 195/364 (53.57%), Query Frame = -1
Query: 449 GCGARYDGQPVLEYVVQEDPSSREKVELGGVHAGDSP-AASPARFFAWDQNSLGMTGPLDRYTVVEFKQRYETVIQVKHGLQRHLAQLSLHCTDLFHHEVSRHRAPGAET--PLSLRRAVKLNHVFPVLLLSTDAQFSRRDRFLAVKRGGISVVLPWLMASTEAAAARRQWTARSTSTVDRYRKAAAACRHKGGISNTVRALLSDELEPANEDTFGKVSPKFGQEDAPALAAAKAAALAASLDFLAADGAAAWRPDDEYNPETLIAVVKSKNALSAAGNDGLRFSHLQCILNTLGGMEGFRPVVGPFWRRSME*PDAFPPEFWECFLQKTSRRSGRSAARYAWDLRCGVLWLLRWSGNTSRNWR 1531
GC A++ + LE VQ DP + + E D P A P + W+Q+S G+ LD ++ + R++TV +V+ A+L H L + +++ + T PLS R +KL ++ P +L S D + +R+ R+ KRG IS LPWL+ T+AA+AR + AR + D++++AA ACRH GG+ + RALL+D+ P N++T+ ++ KF +ED + A A A+AAS A WRP+ E++P L+ V+ S+++ AGNDG RFSHL+ I+NT G E F + WRR + P+AFPPEFW + + G G+ W + T R W+
Sbjct: 119 GCEAQHSRRDSLEAAVQADPGLQLRAERLIRGLNDEPHGARP--LYIWNQDSPGIGPALDDVSMDDLSLRFQTVKKVQPRFASDHARLQTHVLHLVNKQLAEGGGASSATGTPLSTIRVIKLWYLLPGILHSFDGRIARKKRYNWFKRGDISSALPWLIEYTKAASARSRGPAREDTPDDKFKRAARACRHSGGVKDAARALLADQPSPGNDETWARLKAKFTREDPVQVEQANAEAIAASRTEEEEGSAPRWRPETEFDPRVLLQVINSRSSNFGAGNDGRRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKLSSLIALGEKCRPVC----IGMTWRRLIAAGTVREWK 476
BLAST of mRNA_H-paniculata_contig34496.9199.1 vs. uniprot
Match: A0A6H5JJ20_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ20_9PHAE) HSP 1 Score: 198 bits (503), Expect = 1.240e-53 Identity = 117/339 (34.51%), Postives = 183/339 (53.98%), Query Frame = -1
Query: 515 GCGARYDGQPVLEYVVQEDPSSREKVELGGVHAGDSPAASPARFFAWDQNSLGMTGPLDRYTVVEFKQRYETVIQVKHGLQRHLAQLSLHCTDLFHHEVSRHRAPGAETPLSLRRAVKLNHVFPVLLLSTDAQFSRRDRFLAVKRGGISVVLPWLMASTEAAAARRQWTARSTSTVDRYRKAAAACRHKGGISNTVRALLSDELEPANEDTFGKVSPKFGQEDAPALAAAKAAALAASLDFLAADGAAAWRPDDEYNPETLIAVVKSKNALSAAGNDGLRFSHLQCILNTLGGMEGFRPVVGPFWRRSME*PDAFPPEFWECFLQKTSRRSGRSAARYA 1531
GCGA++ + LE VQ DP + + E D P + + + W+Q+S G+ LD ++ + ++T+ + + TPLS R +KL ++ P +L S D + +R+ R+ ++KRG IS VLPWL+ T+AA+AR + A + D+++ AA ACRH GG+ + ALL+D+ P N++T+ ++ KF ED + A A A+AAS A WRP+ E++P+ L+ V+ S+++ S AGNDG RFSHL+ I+NT G E F + WRR + P+AFPPEFW + Q + G+SA + A
Sbjct: 112 GCGAQHSRRDSLEAAVQADPGLQLRAERLIRGLNDEPHGARS-LYIWNQDSPGIGPALDDVSMDDLTLGFQTLAEGGGA------------------------SSATGTPLSTIRVIKLWYLLPGILHSFDGRIARKKRYNSLKRGDISSVLPWLIEYTKAASARSRGPAPEDTPDDKFKTAAQACRHSGGVKDAAGALLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGKSAVQCA 425
BLAST of mRNA_H-paniculata_contig34496.9199.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE) HSP 1 Score: 194 bits (492), Expect = 3.300e-49 Identity = 113/310 (36.45%), Postives = 175/310 (56.45%), Query Frame = -1
Query: 449 TGP-LDRYTVVEFKQRYETVIQVKHGLQRHLAQLSLHCTDLFHHEVSRHRAPGAET--PLSLRRAVKLNHVFPVLLLSTDAQFSRRDRFLAVKRGGISVVLPWLMASTEAAAARRQWTARSTSTVDRYRKAAAACRHKGGISNTVRALLSDELEPANEDTFGKVSPKFGQEDAPALAAAKAAALAASLDFLAADGAAAWRPDDEYNPETLIAVVKSKNALSAAGNDGLRFSHLQCILNTLGGMEGFRPVVGPFWRRSME*PDAFPPEFWECFLQKTSRRSGRSAARYAWDLRCGVLWLLRWSGNTSRNWR 1369
+GP LD ++ + R++TV +V+ A L H L + +++ + T PLS R +KL ++ P +L S D + +R+ R+ ++KRG IS VLPWL+ T+AA+AR + +AR + D++++AA ACRH GG+ + RALL+D+ P N++T+ ++ KF ED + A A A AAS A WRP+ E++P+ L+ V+ S+++ S AGNDG RFSHL+ I+NT G E F + WRR + P+AFPPEFW + Q + G G+ W + T R W+
Sbjct: 185 SGPALDDVSMDDLSLRFQTVKKVQPRFASDHACLQTHVLHLVNKQLAEGGGASSATGTPLSTIRVIKLWYLLPGILHSFDGRIARKKRYNSLKRGDISSVLPWLIECTKAASARSRGSAREDTPDDKFKRAAQACRHSGGVKDAARALLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEAKAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVC----IGMTWRRLIAAGTVREWK 490
BLAST of mRNA_H-paniculata_contig34496.9199.1 vs. uniprot
Match: A0A6H5JGW0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGW0_9PHAE) HSP 1 Score: 189 bits (479), Expect = 6.440e-49 Identity = 107/294 (36.39%), Postives = 166/294 (56.46%), Query Frame = -1
Query: 449 YETVIQVKHGLQRHLAQLSLHCTDLFHHEVSRHRAPGAET--PLSLRRAVKLNHVFPVLLLSTDAQFSRRDRFLAVKRGGISVVLPWLMASTEAAAARRQWTARSTSTVDRYRKAAAACRHKGGISNTVRALLSDELEPANEDTFGKVSPKFGQEDAPALAAAKAAALAASLDFLAADGAAAWRPDDEYNPETLIAVVKSKNALSAAGNDGLRFSHLQCILNTLGGMEGFRPVVGPFWRRSME*PDAFPPEFWECFLQKTSRRSGRSAARYAWDLRCGVLWLLRWSGNTSRNWR 1324
++TV +V+ A+L H L + +++ + T PLS R +K ++ P +L S D + +R+ R+ ++KRG IS VLPWL+ T+AA+AR + AR + D++++AA ACRH GG+ + RALL+D+ P N++T+ ++ KF ED + A A A+AAS A WRP+ E++P+ L+ V+ S+++ S AGNDG RFSHL+ I+NT G E F + WRR + P+AFPPEFW + Q + G G+ W + T R W+
Sbjct: 250 FQTVKKVQPRFASDHARLQTHVLHLVNKQLAEGGGASSATGAPLSTIRVIKRWYLLPGILHSFDGRIARKKRYNSLKRGDISSVLPWLIEYTKAASARSRGPAREDTPDDKFKRAARACRHSGGVKDAARALLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVC----IGMTWRRLIAAGTVREWK 539
BLAST of mRNA_H-paniculata_contig34496.9199.1 vs. uniprot
Match: A0A6H5KJC0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJC0_9PHAE) HSP 1 Score: 181 bits (459), Expect = 4.560e-45 Identity = 121/365 (33.15%), Postives = 184/365 (50.41%), Query Frame = -1
Query: 449 GCGARYDGQPVLEYVVQEDPSSREKVELGGVHAGDSP-AASPARFFAWDQNSLGMTGPLDRYTVVEFKQRYETVIQVKHGLQRHLAQLSLHCTDLFHHEVSRHRAPGAET--PLSLRRAVKLNHVFPVLLLSTDAQFSRRDRFLAVKRGGISVVLPWLMASTEAAAARRQWTARSTSTVDRYRKAAAACRHKGGISNTVRALLSDELEPANEDTFGKVSPKFGQEDAPALAAAKAAALAASLDFLAADGAAAWRPDDEYNPETLIAVVKSKNALSAAGNDGLRFSHLQC-ILNTLGGMEGFRPVVGPFWRRSME*PDAFPPEFWECFLQKTSRRSGRSAARYAWDLRCGVLWLLRWSGNTSRNWR 1531
GCG ++ + LE VQ DP + + E D P A P + W+Q+S G+ LD ++ + R++TV +V+ A+L H L + +++ + T PLS R +KL ++ P G IS VLPWL+ T+AA+AR + AR + D++++AA ACRH GG+ + RALL+D+ P N++T+ ++ KF ED + A A A+AAS A WRP+ E++P+ L+ V+ S+++ S AGNDG FSHL I+NT G E F + WRR + P+AFPPEFW + Q + G G+ W + T R W+
Sbjct: 103 GCGDQHSRRDSLEAAVQADPGLQLRAERLIRGLNDEPHGARP--LYIWNQDSPGIGPALDDVSMDDLSLRFQTVKKVQPRFASDHARLQTHVLHLVNKQLAEGGGASSATGTPLSTIRVIKLWYLLP---------------------GVISSVLPWLIEYTKAASARSRGPAREDTPDDKFKRAARACRHSGGVKDAARALLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQCFSHLNXSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVC----IGMTWRRLIAAGTVREWK 440
BLAST of mRNA_H-paniculata_contig34496.9199.1 vs. uniprot
Match: A0A6H5KQQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQQ8_9PHAE) HSP 1 Score: 163 bits (412), Expect = 5.510e-41 Identity = 101/288 (35.07%), Postives = 159/288 (55.21%), Query Frame = -1
Query: 641 LEYVVQEDPSSREKVELGGVHAGDSPAASPARFFAWDQNSLGMTGPLDRYTVVEFKQRYETVIQVKHGLQRHLAQLSLHCTDLFHHEVSRHRAPGAET--PLSLRRAVKLNHVFPVLLLSTDAQFSRRDRFLAVKRGGISVVLPWLMASTEAAAARRQWTARSTSTVDRYRKAAAACRHKGGISNTVRALLSDELEPANEDTFGKVSPKFGQEDAPALAAAKAAALAASLDFLAADGAAAWRPDDEYNPETLIAVVKSKNALSAAGNDGLRFSHLQCILNTLGGMEGF 1498
LE VQ DP + + E D P + + + W+Q+S G+ LD + R++TV +V+ A+L H L + +++ + T PLS R + L ++ P +L S D + +R+ R ++KRG IS LPWL+ T+AA+AR + AR + D++++AA ACRH GG+ + RAL +D+ N++T+ + +F ED + A A A+AAS A WRP+ E+ P+ L+ V+ S+++ S AGNDG RFSHL+ I+NT G E F
Sbjct: 108 LEAAVQADPGLQLRAERLIRGLNDEPHGARS-LYIWNQDSPGIGPALDDVRMDALTFRFQTVKKVQPRYASDHARLQTHVLHLVNKQLAEGGGASSATGTPLSTIRVITLWYLLPGILHSFDGRIARKKRHKSLKRGDISSALPWLIEYTKAASARSRGPAREDTPDDKFKRAAQACRHSGGVKDAARALFADQPSLGNDETWACLKAEFPHEDPVQVEQAVAEAIAASRTEEEGGSAPRWRPETEFAPQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEF 394
BLAST of mRNA_H-paniculata_contig34496.9199.1 vs. uniprot
Match: A0A6H5KAK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAK8_9PHAE) HSP 1 Score: 169 bits (427), Expect = 6.870e-41 Identity = 111/361 (30.75%), Postives = 171/361 (47.37%), Query Frame = -1
Query: 449 GCGARYDGQPVLEYVVQEDPSSREKVELGGVHAGDSPAASPARFFAWDQNSLGMTGPLDRYTVVEFKQRYETVIQVKHGLQRHLAQLSLHCTDLFHHEVSRHRAPGAETPLSLRRAVKLNHVFPVLLLSTDAQFSRRDRFLAVKRGGISVVLPWLMASTEAAAARRQWTARSTSTVDRYRKAAAACRHKGGISNTVRALLSDELEPANEDTFGKVSPKFGQEDAPALAAAKAAALAASLDFLAADGAAAWRPDDEYNPETLIAVVKSKNALSAAGNDGLRFSHLQCILNTLGGMEGFRPVVGPFWRRSME*PDAFPPEFWECFLQKTSRRSGRSAARYAWDLRCGVLWLLRWSGNTSRNWR 1531
GCGA++ + LE VQ +P + + E D P + + + W+Q+SLG+ LD ++ + R++T G PLS + + V D + +R+ RF RG IS VLPWL+ T+AA+AR + AR + D++++AA ACRH GG+ + A L+D+ P N++T+ ++ KF ED + A A A+ AS A WRP+ E++P+ + V+ +++ S A NDG RFSHL I+NT G E F + WRR + P+AFPPEFW + Q + G G+ W + T R W+
Sbjct: 103 GCGAQHSRKDSLEVAVQANPVLQLRAERLIRGLNDEPHGARS-LYIWNQDSLGIGPALDNISMDDLTLRFQT---------------------------------GPHFPLS--GSSNFGTSYQVFCTPFDGRIARKKRF----RGDISSVLPWLIEYTKAASARSRGPAREDTPDDKFKRAAQACRHSGGVKDAASAPLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEAITASRTEEEEGSAPRWRPETEFDPQVFLQVINRRSSNSGADNDGQRFSHLTSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVC----IGMTWRRLIAAGTVREWK 419 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig34496.9199.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig34496.9199.1 >prot_H-paniculata_contig34496.9199.1 ID=prot_H-paniculata_contig34496.9199.1|Name=mRNA_H-paniculata_contig34496.9199.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=327bp MEHDGAAKLRAARDRYPVLPLRQVNLLQFRLVLPDHLSSQSTPHRRSHAYback to top mRNA from alignment at H-paniculata_contig34496:123..1914+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig34496.9199.1 ID=mRNA_H-paniculata_contig34496.9199.1|Name=mRNA_H-paniculata_contig34496.9199.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1792bp|location=Sequence derived from alignment at H-paniculata_contig34496:123..1914+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig34496:123..1914+ >mRNA_H-paniculata_contig34496.9199.1 ID=mRNA_H-paniculata_contig34496.9199.1|Name=mRNA_H-paniculata_contig34496.9199.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1962bp|location=Sequence derived from alignment at H-paniculata_contig34496:123..1914+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |