mRNA_H-paniculata_contig34461.9192.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig34461.9192.1 vs. uniprot
Match: UPI001E1BCD31 (secreted RxLR effector protein 161-like n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BCD31) HSP 1 Score: 110 bits (274), Expect = 2.840e-26 Identity = 69/203 (33.99%), Postives = 107/203 (52.71%), Query Frame = 1
Query: 31 EEAKEMRASPYREAVRALMWAVTMTRPDIAHAVRTTAKFCENPVVEHKRAVVKLPQHILRTADLRIIIYGGQDCEVEMLAYADSDYSRGYDSRCSVSGGAVLLRAGAISWHARPQELTAAGTTEAEY-------------------------------GDNQGAEKMIHNKHSSRRTRHTDVKHHIVRDAVEAGKVDVAYVGT 546
+E +EM+ PY+EAV AL++ T TRPDI++AV AKF +NP ++H +AV ++ ++I T I+ Y + E+ + Y D+DY D R S SG +L +G+ISW +R QE T+ TTE+E+ DNQGA + HN R+ + D++ +V+ A E+G +D YV +
Sbjct: 27 KEKEEMKNIPYKEAVGALLYLSTTTRPDISYAVGQVAKFSQNPGIQHWKAVKRIIRYIAGTRTYGIL-YSQEKGEM-VTGYTDADYGGDLDDRTSTSGCVLLCSSGSISWFSRKQECTSLSTTESEFVTASEAAKEATWIRSLLKEIRRREQEPIPLLWDNQGAIRCAHNPELHRKMKPIDIRFRLVKRAQESGVIDARYVNS 227
BLAST of mRNA_H-paniculata_contig34461.9192.1 vs. uniprot
Match: A0A8J6HP80_TENMO (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6HP80_TENMO) HSP 1 Score: 107 bits (267), Expect = 9.240e-25 Identity = 69/208 (33.17%), Postives = 102/208 (49.04%), Query Frame = 1
Query: 22 KTSEEAKEMRASPYREAVRALMWAVTMTRPDIAHAVRTTAKFCENPVVEHKRAVVKLPQHILRTADLRIIIY-GGQDCEVEMLAYADSDYSRGYDSRCSVSGGAVLLRAGAISWHARPQELTAAGTTEAEY------------------------------GDNQGAEKMIHNKHSSRRTRHTDVKHHIVRDAVEAGKVDVAYVGTGE 552
KT EE K + PY+ V +LM+ TRPDIAHAVR ++F N +H RA ++ +++ T +L ++ GQ E++ YAD+D+ D R S +G A+SW +R Q A +TEAEY DNQGA ++ N RT+H D++HH +R+AVE G + V Y+ T +
Sbjct: 86 KTEEEKKAVEMLPYQSLVGSLMYLAVSTRPDIAHAVRMLSQFNTNFGEQHWRAAKRVLRYLKNTENLGLMFKKSGQ----ELVGYADADWGANIDDRRSYTGYVFNFANAAVSWESRKQRTVAMSSTEAEYMALSESTKEAIHLRRFLSEVLDQPSTTIIFNDNQGAGQLSKNHVFHNRTKHVDIRHHFIREAVERGDIKVEYLPTDQ 289
BLAST of mRNA_H-paniculata_contig34461.9192.1 vs. uniprot
Match: A0A0V0RW66_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trichinella nelsoni TaxID=6336 RepID=A0A0V0RW66_9BILA) HSP 1 Score: 100 bits (248), Expect = 1.070e-22 Identity = 62/186 (33.33%), Postives = 95/186 (51.08%), Query Frame = 1
Query: 58 PYREAVRALMWAVTMTRPDIAHAVRTTAKFCENPVVEHKRAVVKLPQHILRTADLRIIIYGGQDCEVEMLAYADSDYSRGYDSRCSVSGGAVLLRAGAISWHARPQELTAAGTTEAEY-------------------------GDNQGAEKMIHNKHSSRRTRHTDVKHHIVRDAVEAGKVDVAYV 540
PYREAV ALM+ +T TRPDIA+AV T ++ + P V+ V ++ +++ TAD ++ E + Y+D+DY +R S +G GA+SWH++ Q+ A TTEAEY DN GA K+ N +R+ HT+V+ H VR+ GK+D+ ++
Sbjct: 13 PYREAVGALMFLMTATRPDIAYAVSTVSQVMDKPTVKAWLGVKRIFRYLRGTADYGLLYQANG--EGVLKGYSDADYVGDVTTRRSRTGVVCTCAGGAVSWHSQKQKSVALSTTEAEYVAASEGAKDMMCLMSLFPEVTEVKQKDNMGAVKLSKNPEFHKRSNHTEVRFHFVREKYSEGKIDIQHI 196
BLAST of mRNA_H-paniculata_contig34461.9192.1 vs. uniprot
Match: A0A8J2WCA4_9CRUS (Hypothetical protein n=1 Tax=Daphnia galeata TaxID=27404 RepID=A0A8J2WCA4_9CRUS) HSP 1 Score: 103 bits (258), Expect = 1.940e-22 Identity = 69/209 (33.01%), Postives = 100/209 (47.85%), Query Frame = 1
Query: 13 DGLKTSEEAKEMRASPYREAVRALMWAVTMTRPDIAHAVRTTAKFCENPVVEHKRAVVKLPQHILRTADLRIIIYGGQDCEVEMLAYADSDYSRGYDSRCSVSGGAVLLRAGAISWHARPQELTAAGTTEAEYG-------------------------------DNQGAEKMIHNKHSSRRTRHTDVKHHIVRDAVEAGKVDVAYVGT 546
D T E M ++PYR+AV +LM+A+ MTRPDIA AV ++F NP H AV ++ ++ T + + G D + L Y+DSDY+ D+R S +G +L G ISW +R Q+ A +TEAEY DNQ ++IHN RT+H VK H +R GK+ + ++ T
Sbjct: 1158 DSPTTVTEQSSMSSTPYRQAVGSLMYAMIMTRPDIAFAVGQVSRFSVNPGPVHWEAVKRILSYLAGTPR-HGLCFTGTDLSNQFLGYSDSDYAGCPDTRRSTTGTLFILNGGPISWKSRIQKPVACSSTEAEYYAAGDAAREAVWLRLLLENLNSRQTKPSPLFCDNQSTIRLIHNPEFHDRTKHIAVKFHYIRQVFSEGKIAMFFIPT 1365
BLAST of mRNA_H-paniculata_contig34461.9192.1 vs. uniprot
Match: A0A8J6HPC5_TENMO (Integrase catalytic domain-containing protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6HPC5_TENMO) HSP 1 Score: 102 bits (255), Expect = 4.790e-22 Identity = 67/208 (32.21%), Postives = 101/208 (48.56%), Query Frame = 1
Query: 22 KTSEEAKEMRASPYREAVRALMWAVTMTRPDIAHAVRTTAKFCENPVVEHKRAVVKLPQHILRTADLRIIIY-GGQDCEVEMLAYADSDYSRGYDSRCSVSGGAVLLRAGAISWHARPQELTAAGTTEAEY------------------------------GDNQGAEKMIHNKHSSRRTRHTDVKHHIVRDAVEAGKVDVAYVGTGE 552
KT EE K + P++ V +LM+ TRPDIAHAV ++F N +H RA ++ +++ T +L ++ GQ E++ YAD+D+ D R S +G A+SW +R Q A +TEAEY DNQGA ++ N RT+H D++HH +R+AVE G + V Y+ T +
Sbjct: 903 KTEEEKKPVELLPHQSLVGSLMYLAVSTRPDIAHAVSMLSQFNTNFGEQHWRAAKRILRYLKNTENLGLMFKKSGQ----ELVGYADADWGASIDDRRSYTGYVFNFANVAVSWESRKQRTVAMSSTEAEYMALSESTKEAIHLRRFLSEVLDQPSTTIIFNDNQGAGQLSKNNVFHNRTKHVDIRHHFIREAVERGDIKVEYLPTDQ 1106
BLAST of mRNA_H-paniculata_contig34461.9192.1 vs. uniprot
Match: A0A0V1GSB7_TRIPS (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trichinella pseudospiralis TaxID=6337 RepID=A0A0V1GSB7_TRIPS) HSP 1 Score: 101 bits (251), Expect = 5.000e-22 Identity = 67/202 (33.17%), Postives = 105/202 (51.98%), Query Frame = 1
Query: 31 EEAKEMRAS--PYREAVRALMWAVTMTRPDIAHAVRTTAKFCENPVVEHKRAVVKLPQHILRTADLRIIIYGGQDCEVEMLAYADSDYSRGYDSRCSVSGGAVLLRAGAISWHARPQELTAAGTTEAEY------------------------------GDNQGAEKMIHNKHSSRRTRHTDVKHHIVRDAVEAGKVDVAYV 540
EE +E +S PYREAV ALM+ +T TRPDIA+AV T A+ + P ++ +AV ++ +++ TAD ++ Y + E + Y+D+DY+ +R S +G + GA+ WH++ Q A TTEAEY DN GA K+ N +R++H DV+ H VR+ GK+D+ ++
Sbjct: 156 EENEEHLSSYIPYREAVGALMFLMTATRPDIAYAVSTVAQVMDKPTIKAWQAVKRIFRYLRGTADYGLL-YQAKG-EGFLKGYSDADYAGDVTTRRSRTGVVCMCAGGAVLWHSQKQRSVALSTTEAEYVAASEATKDIMWLMTLFAEVTEVKQKPILFADNMGAVKLSKNPEFHKRSKHIDVRFHFVREKYNEGKIDIQHI 355
BLAST of mRNA_H-paniculata_contig34461.9192.1 vs. uniprot
Match: UPI001AADD243 (secreted RxLR effector protein 161-like n=2 Tax=gambiae species complex TaxID=44542 RepID=UPI001AADD243) HSP 1 Score: 97.8 bits (242), Expect = 1.340e-21 Identity = 61/212 (28.77%), Postives = 99/212 (46.70%), Query Frame = 1
Query: 1 MIKNDGLKTSEEAKEMRASPYREAVRALMWAVTMTRPDIAHAVRTTAKFCENPVVEHKRAVVKLPQHILRTADLRIIIYGGQDCEVEMLAYADSDYSRGYDSRCSVSGGAVLLRAGAISWHARPQELTAAGTTEAEYG------------------------------DNQGAEKMIHNKHSSRRTRHTDVKHHIVRDAVEAGKVDVAYVGT 546
+ K + K++ E M+ PY+EAV LM+ TRPDI +AV ++F +NP +H V + +++ T++ +++ D ++ + Y D+D+ D R S +G + + GAISW + Q A T EAEY DNQ + N RT+H D++HH ++DA+ G V + YV T
Sbjct: 17 LTKEESPKSNNETAAMKDVPYQEAVGCLMYLAQSTRPDILYAVNMLSRFNKNPGQKHWNGVKHVMRYLRGTSNFKLVYKKNVDSKI--IGYCDADWGSDPDERKSTTGNIFMAQGGAISWMCKKQPTVALSTCEAEYMSVSAAVQEASWWRGLSAKLANADEVIEIRCDNQSCIAITKNGGYHPRTKHIDIRHHFIKDALSRGIVTLEYVST 226
BLAST of mRNA_H-paniculata_contig34461.9192.1 vs. uniprot
Match: A0A085LP75_9BILA (Integrase catalytic domain-containing protein n=1 Tax=Trichuris suis TaxID=68888 RepID=A0A085LP75_9BILA) HSP 1 Score: 100 bits (250), Expect = 2.240e-21 Identity = 64/205 (31.22%), Postives = 99/205 (48.29%), Query Frame = 1
Query: 22 KTSEEAKEMRASPYREAVRALMWAVTMTRPDIAHAVRTTAKFCENPVVEHKRAVVKLPQHILRTADLRIIIYGGQDCEVEMLAYADSDYSRGYDSRCSVSGGAVLLRAGAISWHARPQELTAAGTTEAEYG------------------------------DNQGAEKMIHNKHSSRRTRHTDVKHHIVRDAVEAGKVDVAYVGT 546
KT EE EM+ PYREAV +L++ R D HAV +++ NP H AV ++ +++ T +++++ + E + AY D+D++ D R S +G V L A+SW ++ Q A T EAEY DN A + + S RT+HTD++HH VR+ V+AG V + +V T
Sbjct: 884 KTEEERTEMKNVPYREAVGSLLYLSQANRADKCHAVGVVSRYSNNPGKAHWIAVKRIMRYLKGTRNMKLVY---KRAERSLTAYCDADWANDKDDRRSTTGFFVCLSGTAVSWSSKKQRTVALSTAEAEYMAPSHAMQEITWLQSLCTEMSIYTEKCRLLCDNSAATSISQGQERSSRTKHTDIRHHFVRENVQAGDVLIEHVAT 1085
BLAST of mRNA_H-paniculata_contig34461.9192.1 vs. uniprot
Match: UPI001E1BC9B8 (uncharacterized protein LOC116934501 n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BC9B8) HSP 1 Score: 99.8 bits (247), Expect = 5.780e-21 Identity = 64/203 (31.53%), Postives = 104/203 (51.23%), Query Frame = 1
Query: 31 EEAKEMRASPYREAVRALMWAVTMTRPDIAHAVRTTAKFCENPVVEHKRAVVKLPQHILRTADLRIIIYGGQDCEVEMLAYADSDYSRGYDSRCSVSGGAVLLRAGAISWHARPQELTAAGTTEAEY-------------------------------GDNQGAEKMIHNKHSSRRTRHTDVKHHIVRDAVEAGKVDVAYVGT 546
++++ R +REAV AL++ TRPD+A+AV AKFC+NP+ EH +A+ ++ ++ T + I + GGQ + + Y D+D++ D S SG + L G ++W ++ Q TA TTEAEY DN+GA +++HN +RT+H +K H +R+ V G + V +V T
Sbjct: 1120 QQSEGERGYSFREAVGALLYIALQTRPDLAYAVCRIAKFCQNPMNEHWKALDQIFGYLKATKEYGIWV-GGQ--KKGLACYVDADFAGDIDDSKSTSGSIMFLNDGPVAWSSKKQPTTALSTTEAEYIAVCQGGKTAVWLGYLLEDLLGKDIRNVPMYCDNEGAVRLVHNPELHQRTKHIRLKWHWIREQVADGLLAVKFVRT 1319
BLAST of mRNA_H-paniculata_contig34461.9192.1 vs. uniprot
Match: A0A0V1NCR1_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=3 Tax=Trichinella TaxID=6333 RepID=A0A0V1NCR1_9BILA) HSP 1 Score: 99.4 bits (246), Expect = 6.320e-21 Identity = 66/202 (32.67%), Postives = 105/202 (51.98%), Query Frame = 1
Query: 31 EEAKEMRAS--PYREAVRALMWAVTMTRPDIAHAVRTTAKFCENPVVEHKRAVVKLPQHILRTADLRIIIYGGQDCEVEMLAYADSDYSRGYDSRCSVSGGAVLLRAGAISWHARPQELTAAGTTEAEYG------------------------------DNQGAEKMIHNKHSSRRTRHTDVKHHIVRDAVEAGKVDVAYV 540
EE +E +S PYREAV ALM+ +T TRPDIA+AV T ++ + P ++ +AV ++ +++ TAD ++ Y + E + Y+D+DY+ +R S +G + GA+ WH++ Q A TTEAEY DN GA K+ N +R++H DV+ H VR+ GK+D+ ++
Sbjct: 341 EEREEHLSSDIPYREAVGALMFLMTATRPDIAYAVSTVSQVMDKPTIKAWQAVKRIFRYLRGTADYGLL-YQAKG-EGFLKGYSDADYAGDVTTRRSRTGVVCMCAGGAVLWHSQKQRSVALSTTEAEYVAASEAAKDMMWLMTLFAEVTEVKQKPILFVDNMGAVKLSKNPEFHKRSKHIDVRFHFVREKYNEGKIDIQHI 540 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig34461.9192.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig34461.9192.1 >prot_H-paniculata_contig34461.9192.1 ID=prot_H-paniculata_contig34461.9192.1|Name=mRNA_H-paniculata_contig34461.9192.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=185bp MIKNDGLKTSEEAKEMRASPYREAVRALMWAVTMTRPDIAHAVRTTAKFCback to top mRNA from alignment at H-paniculata_contig34461:144..794+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig34461.9192.1 ID=mRNA_H-paniculata_contig34461.9192.1|Name=mRNA_H-paniculata_contig34461.9192.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=651bp|location=Sequence derived from alignment at H-paniculata_contig34461:144..794+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig34461:144..794+ >mRNA_H-paniculata_contig34461.9192.1 ID=mRNA_H-paniculata_contig34461.9192.1|Name=mRNA_H-paniculata_contig34461.9192.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1110bp|location=Sequence derived from alignment at H-paniculata_contig34461:144..794+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |