mRNA_H-paniculata_contig34223.9145.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig34223.9145.1 vs. uniprot
Match: A0A6H5L981_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L981_9PHAE) HSP 1 Score: 228 bits (581), Expect = 3.060e-67 Identity = 121/138 (87.68%), Postives = 128/138 (92.75%), Query Frame = 1
Query: 1 EITLTRRLVKLRDVKLAALVGDVKKEPVGYLQLSGFSKGAAQELEQAYRYLDANANGGLRGVILDLRGNPGGLLEAAVDVSALFVPEGSSIVSIKGRNFQDVTYGSSNGPLRTASIPLVVLINGGTASAAEIVSGAVQ 414
EITLTRRLVKLRDVKLAALVGDVK PVGY+QLSGFS GAAQEL+QAYRYLD+ A GGLRGVILD+RGNPGGLLEAAVDVSALFVP+GS IVSIKGRNFQDVTYGSS GP+R AS PLVVL NGGTASAAEIV+GAVQ
Sbjct: 483 EITLTRRLVKLRDVKLAALVGDVKNAPVGYMQLSGFSMGAAQELQQAYRYLDSAAEGGLRGVILDMRGNPGGLLEAAVDVSALFVPDGSRIVSIKGRNFQDVTYGSSQGPVRPASTPLVVLTNGGTASAAEIVAGAVQ 620
BLAST of mRNA_H-paniculata_contig34223.9145.1 vs. uniprot
Match: A0A835Z050_9STRA (ClpP/crotonase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z050_9STRA) HSP 1 Score: 148 bits (373), Expect = 9.330e-39 Identity = 83/138 (60.14%), Postives = 100/138 (72.46%), Query Frame = 1
Query: 1 EITLTRRLVKLRDVKLAALVGDVKKEPVGYLQLSGFSKGAAQELEQAYRYLDANANGGLRGVILDLRGNPGGLLEAAVDVSALFVPEGSSIVSIKGRNFQDVTYGSSNGPLRTASIPLVVLINGGTASAAEIVSGAVQ 414
E+ L RR+VK+ DVKLA LVG + VGY+QLSGFS A ++L A LD A GL G+ILDLRGNPGGLLE+AV+VSA VP+GS IV KGR F + Y S++ PLR A +PL +L N GTASAAEIVSGA+Q
Sbjct: 291 EVILKRRMVKVSDVKLATLVGS-PADGVGYVQLSGFSPSAGKDLAAALHALDMTAPKGLSGLILDLRGNPGGLLESAVEVSAALVPQGSDIVFAKGRAFGEAKYKSASAPLRRAEVPLAILTNSGTASAAEIVSGAIQ 427
BLAST of mRNA_H-paniculata_contig34223.9145.1 vs. uniprot
Match: A0A7S3XNJ2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNJ2_HETAK) HSP 1 Score: 139 bits (349), Expect = 1.870e-35 Identity = 81/146 (55.48%), Postives = 101/146 (69.18%), Query Frame = 1
Query: 1 EITLTRRLVKLRDVKLAAL----VGDVKKEPVGYLQLSGFSKGAAQELEQAYRYLDANANGG----LRGVILDLRGNPGGLLEAAVDVSALFVPEGSSIVSIKGRNFQDVTYGSSNGPLRTASIPLVVLINGGTASAAEIVSGAVQ 414
E+ L RR V++ DVK L V PVGY+ L GFS GA +E+E AYR L A LRGV+LDLRGNPGGLL++AVDV++L VP S++VS+KGRNF + + S+ P+R S PLVVL++GGTASAAEIVSGAVQ
Sbjct: 326 EVVLPRRQVRVPDVKCFTLLDPKVVGAPDFPVGYISLKGFSAGAGREVELAYRVLTERAQAAGASRLRGVVLDLRGNPGGLLDSAVDVASLLVPRDSTLVSVKGRNFPETGFVSTGDPVRPLSQPLVVLVDGGTASAAEIVSGAVQ 471
BLAST of mRNA_H-paniculata_contig34223.9145.1 vs. uniprot
Match: A0A7S2AM26_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AM26_9STRA) HSP 1 Score: 134 bits (338), Expect = 1.150e-34 Identity = 81/147 (55.10%), Postives = 102/147 (69.39%), Query Frame = 1
Query: 1 EITLTRRLVKLRDVKLAALVGDVK-----KEPVGYLQLSGFSKGAAQELEQAYRYLDANAN----GGLRGVILDLRGNPGGLLEAAVDVSALFVPEGSSIVSIKGRNFQDVTYGSSNGPLRTASIPLVVLINGGTASAAEIVSGAVQ 414
E L R V+LRDVKLA L+G + + +GY++LSGFS+ A EL QA LDA A L G++LDLRGNPGGLL +AVDV+++FVP+ S IVS KGR F+ V Y S+ P+ +S+PL VLIN GTASAAEIVSGA+Q
Sbjct: 47 EAELPRSQVRLRDVKLATLLGPSEGASSNQPAIGYVELSGFSQEAGAELRQAVANLDAEARVLHGTPLTGLVLDLRGNPGGLLTSAVDVASVFVPKDSDIVSAKGRGFRPVLYRSTAEPVVPSSVPLAVLINSGTASAAEIVSGAIQ 193
BLAST of mRNA_H-paniculata_contig34223.9145.1 vs. uniprot
Match: A0A0G4F0N3_VITBC (PDZ domain-containing protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F0N3_VITBC) HSP 1 Score: 134 bits (337), Expect = 8.550e-34 Identity = 76/138 (55.07%), Postives = 101/138 (73.19%), Query Frame = 1
Query: 4 ITLTRRLVKLRDVKLAALVGDVKKEPVGYLQLSGFSKGAAQELEQAYRYLDANA-NGGLRGVILDLRGNPGGLLEAAVDVSALFVPEGSSIVSIKGRNFQDVTYGSSNGPLRTASIPLVVLINGGTASAAEIVSGAVQ 414
+TLTRRLV++ +VKL +G + + +GY+QLSGFS + E+ A R+L NA GL GV+LDLRGNPGGLL +AVD+++LFVP+GS IVS +GR+F V Y S+ P+ S+ LV+L N TASAAEIVSGA+Q
Sbjct: 445 VTLTRRLVRVPNVKLFQYLGS-RDDGIGYIQLSGFSASSFAEMRVALRWLQQNAPRAGLDGVVLDLRGNPGGLLNSAVDIASLFVPKGSEIVSAQGRSFVRVAYKSTTEPVLDPSVKLVLLTNEATASAAEIVSGAIQ 581
BLAST of mRNA_H-paniculata_contig34223.9145.1 vs. uniprot
Match: B7GBC3_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GBC3_PHATC) HSP 1 Score: 132 bits (333), Expect = 2.880e-33 Identity = 75/143 (52.45%), Postives = 98/143 (68.53%), Query Frame = 1
Query: 4 ITLTRRLVKLRDVKLAALVGDVKKEPVGYLQLSGFSKGAAQELEQAYRYLD------ANANGGLRGVILDLRGNPGGLLEAAVDVSALFVPEGSSIVSIKGRNFQDVTYGSSNGPLRTASIPLVVLINGGTASAAEIVSGAVQ 414
+T+ R +V+LRDVKLA LVG ++ +GY+QLSGF+ A E+ QA YL N + L+G++LDLRGNPGGLL +AVDV++L VP GS IVS +GR F + Y S P+ + L VL+NG TASAAEIV+GAVQ
Sbjct: 414 VTMPRAVVRLRDVKLATLVGS-PRDGIGYIQLSGFTSNAGAEMRQAITYLQQRTLDATNGDKSLQGLVLDLRGNPGGLLTSAVDVASLLVPNGSDIVSARGRGFPGMLYRSRVDPILNPNTKLAVLVNGQTASAAEIVAGAVQ 555
BLAST of mRNA_H-paniculata_contig34223.9145.1 vs. uniprot
Match: A0A0G4EX77_VITBC (PDZ domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EX77_VITBC) HSP 1 Score: 132 bits (332), Expect = 3.700e-33 Identity = 75/138 (54.35%), Postives = 101/138 (73.19%), Query Frame = 1
Query: 4 ITLTRRLVKLRDVKLAALVGDVKKEPVGYLQLSGFSKGAAQELEQAYRYLDANA-NGGLRGVILDLRGNPGGLLEAAVDVSALFVPEGSSIVSIKGRNFQDVTYGSSNGPLRTASIPLVVLINGGTASAAEIVSGAVQ 414
+TLTRRLV++ +VKL +G + + +GY+QLSGFS + E+ A R+L NA GL GV+L+LRGNPGGLL +AVD+++LFVP+GS IVS +GR+F V Y S+ P+ S+ LV+L N TASAAEIVSGA+Q
Sbjct: 229 VTLTRRLVRVPNVKLFQYLGS-RDDGIGYIQLSGFSASSFAEMRVALRWLQQNAPRAGLDGVVLNLRGNPGGLLNSAVDIASLFVPKGSEIVSAQGRSFVRVAYKSTTEPVLDPSVKLVLLTNEATASAAEIVSGAIQ 365
BLAST of mRNA_H-paniculata_contig34223.9145.1 vs. uniprot
Match: A0A7S4IQW6_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IQW6_9STRA) HSP 1 Score: 130 bits (327), Expect = 1.880e-32 Identity = 76/143 (53.15%), Postives = 97/143 (67.83%), Query Frame = 1
Query: 4 ITLTRRLVKLRDVKLAALVGDVKKEPVGYLQLSGFSKGAAQELEQAYRYLD------ANANGGLRGVILDLRGNPGGLLEAAVDVSALFVPEGSSIVSIKGRNFQDVTYGSSNGPLRTASIPLVVLINGGTASAAEIVSGAVQ 414
++L R LVK+RDVKLA VGD ++ VGY+Q+SGF+ +EL A L + GLRG++LDLRGNPGGLL +AVDV++L VP+GS IVS +GR F V Y S P+ + L VL+NG TASAAEIVSGA+Q
Sbjct: 446 VSLPRTLVKMRDVKLATFVGD-PRDGVGYVQVSGFAAETGRELRNAILALQRVAEDTSGGEAGLRGLVLDLRGNPGGLLTSAVDVASLVVPKGSDIVSARGRGFPSVLYRSRVDPILDPATKLAVLVNGQTASAAEIVSGAIQ 587
BLAST of mRNA_H-paniculata_contig34223.9145.1 vs. uniprot
Match: A0A7S1B4F4_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B4F4_9STRA) HSP 1 Score: 127 bits (319), Expect = 1.770e-31 Identity = 75/143 (52.45%), Postives = 94/143 (65.73%), Query Frame = 1
Query: 4 ITLTRRLVKLRDVKLAALVGDVKKEPVGYLQLSGFSKGAAQELEQAYRYLDANANG------GLRGVILDLRGNPGGLLEAAVDVSALFVPEGSSIVSIKGRNFQDVTYGSSNGPLRTASIPLVVLINGGTASAAEIVSGAVQ 414
+ + RRLVK+ D+KL +G+ KKE +GY+QLS FS E+ Q+ L A GLRG+++DLRGNPGGLL +AVDV +L +P GS IVS +GR F V Y S PL + LVVL+NG TASAAEIVSGAVQ
Sbjct: 206 VQIPRRLVKIPDIKLTTFLGE-KKEGIGYVQLSAFSGDTGAEMRQSILALQKAAERADPSAQGLRGLVVDLRGNPGGLLTSAVDVCSLLLPNGSDIVSARGRGFPGVLYRSRTEPLLDPATKLVVLVNGSTASAAEIVSGAVQ 347
BLAST of mRNA_H-paniculata_contig34223.9145.1 vs. uniprot
Match: A0A7S4QMK2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QMK2_9STRA) HSP 1 Score: 127 bits (318), Expect = 1.780e-31 Identity = 77/143 (53.85%), Postives = 100/143 (69.93%), Query Frame = 1
Query: 4 ITLTRRLVKLRDVKLAALVGDVKKEPVGYLQLSGFSKGAAQELEQAY---RYLDANANGG---LRGVILDLRGNPGGLLEAAVDVSALFVPEGSSIVSIKGRNFQDVTYGSSNGPLRTASIPLVVLINGGTASAAEIVSGAVQ 414
++L R+ V++ DVKLAALVGD KE +GY+ L+GF+ A E+ + + L NA+GG L+G++LDLRGNPGGLL +AVDV++L VP+GS IVS +GR F V Y S P+ LVVL+N TASAAEIVSGAVQ
Sbjct: 433 VSLPRQTVRIPDVKLAALVGD-PKEGMGYISLTGFAANAGLEVRNSIIGLQRLAENASGGERSLQGLVLDLRGNPGGLLTSAVDVASLLVPKGSDIVSARGRGFPGVVYRSQVDPVLDPQTKLVVLVNSQTASAAEIVSGAVQ 574 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig34223.9145.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig34223.9145.1 >prot_H-paniculata_contig34223.9145.1 ID=prot_H-paniculata_contig34223.9145.1|Name=mRNA_H-paniculata_contig34223.9145.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=138bp EITLTRRLVKLRDVKLAALVGDVKKEPVGYLQLSGFSKGAAQELEQAYRYback to top mRNA from alignment at H-paniculata_contig34223:622..1428+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig34223.9145.1 ID=mRNA_H-paniculata_contig34223.9145.1|Name=mRNA_H-paniculata_contig34223.9145.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=807bp|location=Sequence derived from alignment at H-paniculata_contig34223:622..1428+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig34223:622..1428+ >mRNA_H-paniculata_contig34223.9145.1 ID=mRNA_H-paniculata_contig34223.9145.1|Name=mRNA_H-paniculata_contig34223.9145.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=828bp|location=Sequence derived from alignment at H-paniculata_contig34223:622..1428+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |