mRNA_H-paniculata_contig34050.9099.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig34050.9099.1
Unique NamemRNA_H-paniculata_contig34050.9099.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig34050.9099.1 vs. uniprot
Match: A0A6H5H5A7_9HEMI (Uncharacterized protein (Fragment) n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5H5A7_9HEMI)

HSP 1 Score: 246 bits (627), Expect = 2.330e-72
Identity = 144/386 (37.31%), Postives = 217/386 (56.22%), Query Frame = 1
Query:    1 GFSQVEGEGFFETSAPVARMSTLRTVFSLAVEHDFELEGMGVDAAYLNAPVKEELFVTLPSEFSPFSRDI---------------PFLRRLRK------------SLYGLKQSGRNWNNTLDDFLVGIGLERSITDSCLYFSRNEGGETNLLVAVYVDDLVIASRREK-VDEFKHNISQRFRMKDLGSLSRVLGIEVRHDRPNGTITISQGSYIREVLKRYGFYECRGVPTPVEGKVKISAPESAD-----KPSEPKLLGAVL-------PDIAYAVHQAARRMEDSYQEDFSTCKRIFRYFSTVPDLGITFGGKSNDHGLEGFVDADWAEDVEDRKSTTGHLFKLNGGAISWCSRKQQLVTWSSTEAGYVAAGEAGKETVYLREY 1038
            GF+Q +GE F ET APV RMS++RT+ +LAVEHD EL  + V  A+LN  + E +++ +P  F     +I                 L+ L+K            SLYGLKQ+GR W+  L + ++ +G ++S +D C+Y+S    G   L++A+YVDDL + S+ +K ++E K  + + F+MK LG +   LGIE   +   G I +SQ  YI++VLKR+G  + + + TP+E  +K++ PE  D     K    KL+G+++       PDIAY V+  ++   +  ++ +   KR+ RY       GI F        L GF DADWA    DR+S +G  F+L G AI+W +RKQ+ V  SS EA Y+A GEA KE +YLR++
Sbjct:  234 GFNQRQGEDFNETFAPVVRMSSIRTIMALAVEHDLELHQLDVTTAFLNGDLSERIYMEIPDNFQEILAEIIEDPNSLEDVVHQANQMLKTLQKTRKGEKVCLLQKSLYGLKQAGRQWHLKLHENVMKLGFKQSYSDPCVYYSHR--GNDTLILAIYVDDLWLGSQNKKWIEEMKGILIKTFKMKYLGKIHYGLGIEFTQNLSEGKICMSQKKYIQDVLKRFGMEDSKPISTPMEVGLKLTRPEKLDEGVMSKYPYQKLIGSLMYLAVSTRPDIAYTVNWLSQFNSNYTEQHWLAAKRVLRYLKGTAKKGIEF--TKTKKPLRGFADADWANCASDRRSYSGFFFELGGAAITWEARKQRTVALSSVEAEYLALGEATKEAIYLRQF 615          
BLAST of mRNA_H-paniculata_contig34050.9099.1 vs. uniprot
Match: A0A6H5H625_9HEMI (Uncharacterized protein n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5H625_9HEMI)

HSP 1 Score: 247 bits (630), Expect = 4.210e-71
Identity = 145/386 (37.56%), Postives = 217/386 (56.22%), Query Frame = 1
Query:    1 GFSQVEGEGFFETSAPVARMSTLRTVFSLAVEHDFELEGMGVDAAYLNAPVKEELFVTLPSEFSPFSRDI---------------PFLRRLRK------------SLYGLKQSGRNWNNTLDDFLVGIGLERSITDSCLYFSRNEGGETNLLVAVYVDDLVIASRREK-VDEFKHNISQRFRMKDLGSLSRVLGIEVRHDRPNGTITISQGSYIREVLKRYGFYECRGVPTPVEGKVKISAPESAD-----KPSEPKLLGAVL-------PDIAYAVHQAARRMEDSYQEDFSTCKRIFRYFSTVPDLGITFGGKSNDHGLEGFVDADWAEDVEDRKSTTGHLFKLNGGAISWCSRKQQLVTWSSTEAGYVAAGEAGKETVYLREY 1038
            GF+Q +GE F ET APV RMS++RT+ +LAVEHD EL  + V  A+LN  + E +++ +P  F     +I                 LR L+K            SLYGLKQ+GR W+  L + ++ +G ++S +D C+Y+S    G   L++A+YVDDL + S+ +K ++E K  + + F+MK LG +   LGIE   +   G I +SQ  YI++VLKR+G  + + + TP+E  +K++ PE  D     K    KL+G+++       PDIAY V+  ++   +  ++ +   KR+ RY       GI F        L GF DADWA    DR+S +G  F+L G AI+W +RKQ+ V  SS EA Y+A GEA KE +YLR++
Sbjct:  102 GFNQRQGEDFNETFAPVVRMSSIRTIMALAVEHDLELHQLDVTTAFLNGDLSERIYMEIPDNFQEILAEIIEDPNSLEDVVHQANQMLRTLQKTQKGEKVCLLQKSLYGLKQAGRQWHLKLHENVMKLGFKQSYSDPCVYYSHR--GNDTLVLAIYVDDLWLGSQNKKWIEEMKGILMKTFKMKYLGKIHYGLGIEFTQNLSEGKICMSQKKYIQDVLKRFGMEDSKPISTPMEVGLKLTRPEKLDEGVMSKYPYQKLIGSLMYLAVSTRPDIAYTVNWLSQFNSNYTEQHWLAAKRVLRYLKGTAKKGIEF--TKTKKPLRGFADADWANCASDRRSYSGFFFELGGAAITWEARKQRTVALSSVEAEYLALGEATKEAIYLRQF 483          
BLAST of mRNA_H-paniculata_contig34050.9099.1 vs. uniprot
Match: A0A1M2VV58_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VV58_TRAPU)

HSP 1 Score: 249 bits (637), Expect = 8.180e-71
Identity = 141/357 (39.50%), Postives = 209/357 (58.54%), Query Frame = 1
Query:    1 GFSQVEGEGFFETSAPVARMSTLRTVFSLAVEHDFELEGMGVDAAYLNAPVKEELFVTLPSEFSPFSRDIPFLRRLRKSLYGLKQSGRNWNNTLDDFLVGIGLERSITDSCLYFSRNEGGETNLLVAVYVDDLVIASR-REKVDEFKHNISQRFRMKDLGSLSRVLGIEVRHDRPNGTITISQGSYIREVLKRYGFYECRGVPTPVEGKVKISAPESADKPSEP--KLLGAVL-------PDIAYAVHQAARRMEDSYQEDFSTCKRIFRYFSTVPDLGITF---GGKSNDHGLEGFVDADWAEDVEDRKSTTGHLFKLNGGAISWCSRKQQLVTWSSTEAGYVAAGEAGKETVYLR 1032
            GF+QVEG  + +T APV++ +++RTV +LA  +D +++ M V +A+LN  + EE+++T P  F     D   + RLRKSLYGLKQ+ R W   +      +G ERS  D  ++     G    L++A+YVDD++IA   R  +D FK  +S+RF M DLGS   +LG+E+  DR   T++ISQ  YI ++L+R+G   CR V TP+E  +K+     A    +P    LG+++       PD+A+AV   ++       + +    R+FRY     DL +++      SN     G+ DADWA DV DR+ST+G  F L+GGA+SW S+KQQ +  SSTEA YVA   A KE ++LR
Sbjct: 1060 GFTQVEGIDYTDTFAPVSKFASIRTVLALAAMYDLDVDQMDVKSAFLNGDLDEEIYMTCPPGFD---HDAGSVWRLRKSLYGLKQASREWYKKIRSEFEDLGFERSDADHSIFVKVENG--VILIIALYVDDMLIAGNDRTTIDAFKSTLSERFEMTDLGSARWILGMEIERDRARHTLSISQAQYIEKILERHGMANCRPVSTPMEPNLKLEKLSEATIDPKPYQSALGSLMYAMLGSRPDLAFAVGALSKHSATPGPQHWKALMRVFRYLRGSSDLCLSYKPDSEHSNGATPLGYCDADWAGDVNDRRSTSGQAFFLHGGAVSWQSKKQQSIAQSSTEAEYVALASAAKEALWLR 1411          
BLAST of mRNA_H-paniculata_contig34050.9099.1 vs. uniprot
Match: W7TJ26_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ26_9STRA)

HSP 1 Score: 240 bits (613), Expect = 7.780e-70
Identity = 138/360 (38.33%), Postives = 211/360 (58.61%), Query Frame = 1
Query:    1 GFSQVEGEGFFETSAPVARMSTLRTVFSLAVEHDFELEGMGVDAAYLNAPVKEELFVTLPSEFSPFSRDI-PFLRRLRKSLYGLKQSGRNWNNTLDDFLVGIGLERSITDSCLYFSRNEGGETNLLVAVYVDDLVIASR-REKVDEFKHNISQRFRMKDLGSLSRVLGIEVRHDRPNGTITISQGSYIREVLKRYGFYECRGVPTPVEGKV-KISAPESADKPSEPKLLGAVL-------PDIAYAVHQAARRMEDSYQEDFSTCKRIFRYFSTVPDLGITFGGKSN-DHGLEGFVDADWAEDVEDRKSTTGHLFKLNGG----AISWCSRKQQLVTWSSTEAGYVAAGEAGKETVYLRE 1035
            G+SQ  G  +  T APVA M+T+R V +LA   D EL+ M VD AYL + ++E++++  P  +  +  +    + RLRKSLYGLKQSGRNW+  +D +  G GL  S  D CLY      GE  L++ +YVDDL+I S  R   D+FK +IS+ F MKDL  L  +LG+ ++ +R N T+ ISQ  YI  +L ++G  +C+ V TP+EG + K+   +        KL+G++L       PDIA+AV    + ++ S +E +   KR+ RY     D+G+ + G S     L G+ DAD+A D ++R+ST+G+ F L+ G     I W +++Q +V  SS E+  ++A  A +  VY+R+
Sbjct:  265 GYSQEFGYDYLHTYAPVASMTTIRLVLALACILDLELDNMDVDTAYLQSDLEEKVYIKQPPGYEKYGPNGGELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGLHPSYADPCLYVKFASSGEI-LVIVLYVDDLIIGSNSRTMTDKFKQDISREFSMKDLKELDWILGMGIKRNRENRTMEISQTGYIGMMLNKFGMADCKSVLTPMEGTLTKMDGKDVKPDNEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNKEHWIAAKRVLRYLKGTRDVGLKYTGNSTGSFTLVGYADADYAGDKDNRRSTSGYTFTLSHGDDVNTIDWKAKQQDVVALSSAESELISACSATQNAVYIRQ 623          
BLAST of mRNA_H-paniculata_contig34050.9099.1 vs. uniprot
Match: A0A7D9KES8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KES8_PARCT)

HSP 1 Score: 239 bits (611), Expect = 1.150e-69
Identity = 138/357 (38.66%), Postives = 214/357 (59.94%), Query Frame = 1
Query:    1 GFSQVEGEGFFETSAPVARMSTLRTVFSLAVEHDFELEGMGVDAAYLNAPVKEELFVTLPSEFSPFSRDIPFLRRLRKSLYGLKQSGRNWNNTLDDFLVGIGLERSITDSCLYFSRNEGGETNLLVAVYVDDLVIASRRE-KVDEFKHNISQRFRMKDLGSLSRVLGIEVRHDRPNGTITISQGSYIREVLKRYGFYECRGVPTPVEG--KVKISAPES--ADKPSEPKLLGAVL-------PDIAYAVHQAARRMEDSYQEDFSTCKRIFRYFSTVPDLGITFGGKSNDHGLEGFVDADWAEDVEDRKSTTGHLFKLNGGAISWCSRKQQLVTWSSTEAGYVAAGEAGKETVYLRE 1035
            GFSQ  G+ + ET +PVAR  ++RTV +LA +H  +L  M V  A+LN  +KEE+++     F    ++   + RLR+S+YGLKQS R WN+ LD  L  +G  ++  D C+Y  + EGGE   ++AVYVDD+++A + + K++E K  ++++F+MKD+G L   LG++V     +  I I Q +Y + VL+R+G    +   TPV    K+K +A +S   D+ +    +G +L       PDIAYAV   AR   D  +E +   KRI RY +   D+G+ + G        G+ DADWA D++DRKST+G++F+++  AISW S+KQ  V  S+ EA Y+A   A +E V+L++
Sbjct:   53 GFSQTFGDDYDETFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQTEGFIEKGKE-HLVCRLRRSIYGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYV-KEEGGEI-FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQLHYFLGVKVIPKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADDSQRVDQVNYQCAVGHLLYLSTKTRPDIAYAVSDVARFSADPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQSCVALSTAEAEYMALASATQEAVWLQQ 406          
BLAST of mRNA_H-paniculata_contig34050.9099.1 vs. uniprot
Match: A0A2G8RWY5_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RWY5_9APHY)

HSP 1 Score: 246 bits (628), Expect = 1.320e-69
Identity = 141/362 (38.95%), Postives = 209/362 (57.73%), Query Frame = 1
Query:    1 GFSQVEGEGFF--ETSAPVARMSTLRTVFSLAVEHDFELEGMGVDAAYLNAPVKEELFVTLPSEFSPFSRDIPFLRRLRKSLYGLKQSGRNWNNTLDDFLVGIGLERSITDSCLYFSRNEGGETNLLVAVYVDDLVIASRREKVDEFKHNISQRFRMKDLGSLSRVLGIEVRHDRPNGTITISQGSYIREVLKRYGFYECRGVPTPVEGKVKISAPESADKPSE---------PKLLGAVL-------PDIAYAVHQAARRMEDSYQEDFSTCKRIFRYFSTVPDLGITFGGKSNDHGLEGFVDADWAEDVEDRKSTTGHLFKLNGGAISWCSRKQQLVTWSSTEAGYVAAGEAGKETVYLR 1032
            GFSQV G  +   ET APV+R+ ++RT+ SLA  HD+EL  M V +AYLN  ++E +++ LP  F+P  +    + RL+K+LYGLKQ+GR W  TL   +  +G  R + D  +++ R   GE+ ++VA  VDDL I    + VD F  +I QRF M DLG L  +LGIEVR DR   TI ISQ SYI  ++ R+   E   +  P++    +   +S   P +          + +G+++       PDI +AV   ++ M++  +  +   KR+ RY     +L + +G  +N+ GL G+ DADW    E R S +G++F L+GGAISW S+KQ +V  SSTEA Y+A   A KE ++LR
Sbjct: 1099 GFSQVPGRDYHDDETFAPVSRLPSIRTILSLAARHDWELRQMDVKSAYLNGILEETVYMRLPPGFAPPEQS-HLVCRLKKTLYGLKQAGRGWYKTLTAAMENMGFTRCVADHAVFYKRE--GESAIIVAASVDDLTITGTSDLVDAFAVDIKQRFEMSDLGDLHWILGIEVRRDRQARTIAISQRSYIDTIVSRFNLDEAAPLSIPLQPGSPLGNHQSPSTPRQFEDMRDVPYREAVGSLMYAAMGTRPDITFAVTALSQFMQNPGRAHWDALKRVLRYLKGSRELWLVYG--TNNEGLRGYSDADWGSSTEHRHSISGYVFTLDGGAISWSSKKQNVVALSSTEAEYIALTHATKEAIWLR 1455          
BLAST of mRNA_H-paniculata_contig34050.9099.1 vs. uniprot
Match: W7TCB8_9STRA (Gag-pol polyprotein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCB8_9STRA)

HSP 1 Score: 233 bits (595), Expect = 1.410e-69
Identity = 135/360 (37.50%), Postives = 210/360 (58.33%), Query Frame = 1
Query:    1 GFSQVEGEGFFETSAPVARMSTLRTVFSLAVEHDFELEGMGVDAAYLNAPVKEELFVTLPSEFSPF-SRDIPFLRRLRKSLYGLKQSGRNWNNTLDDFLVGIGLERSITDSCLYFSRNEGGETNLLVAVYVDDLVIASR-REKVDEFKHNISQRFRMKDLGSLSRVLGIEVRHDRPNGTITISQGSYIREVLKRYGFYECRGVPTPVEGKV-KISAPESADKPSEPKLLGAVL-------PDIAYAVHQAARRMEDSYQEDFSTCKRIFRYFSTVPDLGITFGGKSN-DHGLEGFVDADWAEDVEDRKSTTGHLFKLNGG----AISWCSRKQQLVTWSSTEAGYVAAGEAGKETVYLRE 1035
            G+SQ  G  +  T APVA ++T+R V +LA   D EL+ M V+ AYL + ++E+++V  P  +  + S     + RLRKSLYGLKQSGRNW+  +D +  G G   S  D CLY      GE  L++ +YVDDL+I S  RE V +FKH IS+ F MKDL  L  +LG+ ++ DR    + ISQ +YI  +L ++   +C+ V TP+EG + K+   +        KL+G++L       PDIA+AV    + ++ S +E +   KR+ RY     ++G+ + G S     L G+ DAD+A D ++R+ST+G+ F L+ G     I W +++Q++V  SS E+  ++A  A +  +Y+R+
Sbjct:   45 GYSQEFGYDYLHTYAPVASITTIRLVLALACILDLELDNMDVEPAYLQSDLEEKVYVKQPPGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEI-LVIVLYVDDLIITSNSREMVGKFKHAISREFSMKDLKELDWILGMAIKRDRGKRVMEISQTAYIDMMLAKFRMADCKPVLTPMEGTLTKMDGKDVKPDNEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTREVGLKYTGNSTGSFTLVGYADADYAGDKDNRRSTSGYAFTLSHGEIVNTIDWRAKQQEVVALSSAESELISACSATQSALYIRQ 403          
BLAST of mRNA_H-paniculata_contig34050.9099.1 vs. uniprot
Match: A0A4Q3EC79_9SPHI (Transposon Pol polyprotein (Fragment) n=1 Tax=Sphingobacteriaceae bacterium TaxID=2021370 RepID=A0A4Q3EC79_9SPHI)

HSP 1 Score: 232 bits (592), Expect = 3.570e-69
Identity = 133/356 (37.36%), Postives = 209/356 (58.71%), Query Frame = 1
Query:    1 GFSQVEGEGFFETSAPVARMSTLRTVFSLAVEHDFELEGMGVDAAYLNAPVKEELFVTLPSEFSPFSRDIPFLRRLRKSLYGLKQSGRNWNNTLDDFLVGIGLERSITDSCLYFSRNEGGETNLLVAVYVDDLVIASRREKVDE-FKHNISQRFRMKDLGSLSRVLGIEVRHDRPNGTITISQGSYIREVLKRYGFYECRGVPTPVEGKVKISAPESA-DKPSE----PKLLGAVL-------PDIAYAVHQAARRMEDSYQEDFSTCKRIFRYFSTVPDLGITFGGKSNDHGLEGFVDADWAEDVEDRKSTTGHLFKLNGGAISWCSRKQQLVTWSSTEAGYVAAGEAGKETVYL 1029
            GFSQ EG  +FET APVA+ ++ R + +L  E D  L  M   +A+LN P+ E++++  P  F   S  +    +L+KS+YGLKQSGRNWN  L+  L+  GL+R ++D C+Y +RN G    ++V V+VDD++IA  ++  +E  +  +  RF+MK LG    +LGI++  DR   T++I Q  YI  VL+R+G  +C    TP++   K S   S  D+ +E     + +G++L       PDI ++V   +R  E+     +   KRI RY     D  +T+G    D  + G+ DAD+  D++DRKST+G++F  NG A+ W S+KQ++V  S+TEA +++   A KE ++L
Sbjct:   16 GFSQREGIDYFETFAPVAKYTSFRYILALTAEMDLHLTQMDAVSAFLNGPLNEDVYMEQPPNFEDKSNRVC---KLKKSIYGLKQSGRNWNQLLNQTLIDFGLKRCLSDQCIYVARNSGNI--MIVMVWVDDVLIACNQKCEEEKLRAALESRFKMKYLGDAKVILGIQITRDRMKKTVSIDQRRYIETVLERFGMEDCNPANTPMDVNTKYSRKMSGNDEKNEIFPYREAIGSLLFAAQVTRPDIIFSVILLSRYCEEPKWAHWIATKRIMRYLKGTIDHKLTYGPSRTD--IIGYSDADYGGDIDDRKSTSGYVFVKNGTALCWQSKKQKVVAQSTTEAEFISLSFATKEAIWL 364          
BLAST of mRNA_H-paniculata_contig34050.9099.1 vs. uniprot
Match: A0A2Z7AL20_9LAMI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7AL20_9LAMI)

HSP 1 Score: 231 bits (589), Expect = 4.670e-69
Identity = 129/361 (35.73%), Postives = 212/361 (58.73%), Query Frame = 1
Query:    1 GFSQVEGEGFFETSAPVARMSTLRTVFSLAVEHDFELEGMGVDAAYLNAPVKEELFVTLPSEFSPFSRDIPFLRRLRKSLYGLKQSGRNWNNTLDDFLVGIGLERSITDSCLYFSRNEGGETNLLVAVYVDDLVIAS-RREKVDEFKHNISQRFRMKDLGSLSRVLGIEVRHDRPNGTITISQGSYIREVLKRYGFYECRGVPTPVEGKVKISAPESADKPSE---------PKLLGAVL-------PDIAYAVHQAARRMEDSYQEDFSTCKRIFRYFSTVPDLGITFGGKSNDHGLEGFVDADWAEDVEDRKSTTGHLFKLNGGAISWCSRKQQLVTWSSTEAGYVAAGEAGKETVYLR 1032
            G++Q EG  F E  + V R++T+R V +L    D  LE + V  A+L+  ++EE+++  P  F+   ++   + RL+KSLYGLKQ+ R W    D +++ +G  R   D C YF R+ GG   +++ +YVDD+++A   +++V E K  +++ F MKDLG  +++LG++V  DR N  I +SQ +Y+++ L R+   + + + TP+    K+S+       +E            +G+++       PDIA AV   +R M +  +E +ST KRI RY     +  + FGG      L G+VD+D+A D + RKSTTG++F L GGA+SW S+ Q +V  S+TEA Y+AA +A KET++++
Sbjct:   53 GYAQKEGIDFNEIFSLVVRLNTVRVVLALCAVFDLHLEQLDVKTAFLHGDLEEEIYMLQPEGFAETGKE-NLVCRLKKSLYGLKQAPRCWYKRFDSYIMSLGYNRLSADPCTYFKRS-GGNDYIILLLYVDDMLVAGPNKDRVQELKAQLAREFDMKDLGPANKILGMQVHRDRSNRKIWLSQTNYLQKFLHRFNMQDSKPISTPLPVNFKLSSDMCPSNEAERMEMSRIPYASAVGSLMFAMICTRPDIAQAVGAVSRYMANPGREHWSTVKRILRYIKGTSNAALCFGGSYLT--LRGYVDSDYAGDPDKRKSTTGYVFTLAGGAVSWVSKLQTVVALSTTEAEYMAATQACKETIWIQ 409          
BLAST of mRNA_H-paniculata_contig34050.9099.1 vs. uniprot
Match: A0A5D6YB57_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB57_9STRA)

HSP 1 Score: 231 bits (588), Expect = 8.800e-69
Identity = 134/363 (36.91%), Postives = 209/363 (57.58%), Query Frame = 1
Query:    1 GFSQVEGEGFFETSAPVARMSTLRTVFSLAVEHDFELEGMGVDAAYLNAPVKEELFVTLPSEFSPFSRDIPFLRRLRKSLYGLKQSGRNWNNTLDDFLVGIGLERSITDSCLYFSRNEGGETNLLVAVYVDDLVIASR-REKVDEFKHNISQRFRMKDLGSLSRVLGIEVRHDRPNGTITISQGSYIREVLKRYGFYECRGVPTPVEGKVKISAP--ESADKPSEP-------KLLGAVL-------PDIAYAVHQAARRMEDSYQEDFSTCKRIFRYFSTVPDLGITFGGKSNDHGLEGFVDADWAEDVEDRKSTTGHLFKLNGGAISWCSRKQQLVTWSSTEAGYVAAGEAGKETVYLREY 1038
            GF Q  G  F ET APVA+ +++R + S+A ++   L  M V  A+LN  ++EE+++  P+ F   ++    + +L+++LYGLKQS R WN T+D+F+  IG  +  TD C+Y  R++  +  + V +YVDDL++A    + +   K  +S+RF M DLG L   LG+EV  D  +G +++ Q  ++  VL ++G  +C+ V TP +  +K++    E   K  +          +GAV+       PD+A AV   ++   D     +   KR+ RY    P  GI F G S D  L G+ DADWA D+E R+ST+G++F LNGG I+W S+KQ+ V  SSTEA Y+A  EA +E V+L+ +
Sbjct:   65 GFLQKYGVDFEETFAPVAKFASIRIILSIAAQYKLVLHQMDVKTAFLNGLLEEEIYMKQPNGFVD-AKYPDHVCKLKRALYGLKQSPRMWNQTIDEFMRKIGFTKCETDHCVYVKRDD--KAMIFVVLYVDDLILACNDTDLLAATKRALSERFEMSDLGELKYCLGMEVERDDKSGDVSMRQTKFLHSVLAKFGMQDCKPVKTPQDPGLKLTKAMCEGGCKHDDTMQGVPYRSAVGAVMYLMVGTRPDLAAAVGVLSQFAADPCPTHWQALKRVLRYLQATPTHGIRFAG-SGDGELIGYSDADWAGDIETRRSTSGYVFVLNGGCITWRSKKQRTVALSSTEAEYMALSEATQEAVWLKAF 423          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig34050.9099.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5H5A7_9HEMI2.330e-7237.31Uncharacterized protein (Fragment) n=1 Tax=Nesidio... [more]
A0A6H5H625_9HEMI4.210e-7137.56Uncharacterized protein n=1 Tax=Nesidiocoris tenui... [more]
A0A1M2VV58_TRAPU8.180e-7139.50Retrovirus-related Pol polyprotein from transposon... [more]
W7TJ26_9STRA7.780e-7038.33Gag-pol polyprotein n=2 Tax=Nannochloropsis gadita... [more]
A0A7D9KES8_PARCT1.150e-6938.66Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A2G8RWY5_9APHY1.320e-6938.95Transcription factor n=1 Tax=Ganoderma sinense ZZ0... [more]
W7TCB8_9STRA1.410e-6937.50Gag-pol polyprotein n=3 Tax=Nannochloropsis gadita... [more]
A0A4Q3EC79_9SPHI3.570e-6937.36Transposon Pol polyprotein (Fragment) n=1 Tax=Sphi... [more]
A0A2Z7AL20_9LAMI4.670e-6935.73Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5D6YB57_9STRA8.800e-6936.91Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig34050contigH-paniculata_contig34050:938..2127 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score243.4
Seed ortholog evalue1.5e-61
Seed eggNOG ortholog164328.Phyra85518
Hectar predicted targeting categoryother localisation
EggNOG free text desc.GAG-pre-integrase domain
EggNOG OGs3QH4V@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons2
Model size1041
Cds size1041
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930051.7159226-CDS-H-paniculata_contig34050:937..12891622930051.7159226-CDS-H-paniculata_contig34050:937..1289Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig34050 938..1289 -
1691481127.0387151-CDS-H-paniculata_contig34050:937..12891691481127.0387151-CDS-H-paniculata_contig34050:937..1289Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig34050 938..1289 -
1622930051.7322254-CDS-H-paniculata_contig34050:1438..21271622930051.7322254-CDS-H-paniculata_contig34050:1438..2127Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig34050 1439..2127 -
1691481127.0479283-CDS-H-paniculata_contig34050:1438..21271691481127.0479283-CDS-H-paniculata_contig34050:1438..2127Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig34050 1439..2127 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig34050.9099.1prot_H-paniculata_contig34050.9099.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig34050 938..2127 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig34050.9099.1

>prot_H-paniculata_contig34050.9099.1 ID=prot_H-paniculata_contig34050.9099.1|Name=mRNA_H-paniculata_contig34050.9099.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=347bp
GFSQVEGEGFFETSAPVARMSTLRTVFSLAVEHDFELEGMGVDAAYLNAP
VKEELFVTLPSEFSPFSRDIPFLRRLRKSLYGLKQSGRNWNNTLDDFLVG
IGLERSITDSCLYFSRNEGGETNLLVAVYVDDLVIASRREKVDEFKHNIS
QRFRMKDLGSLSRVLGIEVRHDRPNGTITISQGSYIREVLKRYGFYECRG
VPTPVEGKVKISAPESADKPSEPKLLGAVLPDIAYAVHQAARRMEDSYQE
DFSTCKRIFRYFSTVPDLGITFGGKSNDHGLEGFVDADWAEDVEDRKSTT
GHLFKLNGGAISWCSRKQQLVTWSSTEAGYVAAGEAGKETVYLREY*
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mRNA from alignment at H-paniculata_contig34050:938..2127-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig34050.9099.1 ID=mRNA_H-paniculata_contig34050.9099.1|Name=mRNA_H-paniculata_contig34050.9099.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1190bp|location=Sequence derived from alignment at H-paniculata_contig34050:938..2127- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGTTTTTCTCAGGTGGAGGGTGAAGGTTTCTTTGAAACCAGTGCCCCCGT AGCTCGCATGTCGACGTTACGTACTGTTTTTAGCCTGGCCGTAGAACACG ATTTCGAATTAGAAGGCATGGGCGTAGATGCGGCGTATTTGAACGCCCCG GTAAAAGAAGAGCTGTTTGTTACGCTACCCTCCGAGTTTTCCCCTTTCTC CCGAGACATACCATTTTTGCGCCGCCTGCGTAAAAGCCTGTACGGCCTCA AGCAGAGCGGTCGAAACTGGAATAACACTCTTGACGATTTTCTTGTTGGG ATAGGACTCGAACGTTCCATTACCGACTCGTGCTTGTACTTTTCCCGCAA CGAAGGGGGAGAGACAAACCTTCTGGTGGCCGTGTATGTTGACGACCTGG TCATTGCTAGTCGTCGTGAGAAAGTAGACGAATTCAAGCATAACATAAGT CAGCGTTTTAGGATGAAAGACTTGGGCTCTCTCTCGCGCGTGTTGGGAAT AGAAGTACGACATGACCGCCCTAATGGTACCATAACCATCTCGCAGGGTA GCTATATCCGCGAGGTACTAAAAAGATACGGTTTTTACGAGTGTCGAGGA GTACCCACCCCTGTAGAGGGAAAAGTGAAGATTTCGGCACCCGAGTCGGC CGACAAGCCCTCCGAACCGAAGTTACTTGGAGCTGTACTGTCGGACATAG GCGCAGGAGTACAAGAAGCAGCAGAGGAAGAAGTGGCAATTCGACTGAAT GCAGAGGCATGGTAGAATTTTCGTGGCAATTCGACTGGATACAGAGGCAT GGTAGGATCTCACTCATGTACGCCTCGACAGGAACTAGACCTGATATAGC ATACGCGGTACACCAAGCAGCACGTCGTATGGAGGACTCATATCAAGAAG ACTTCAGCACATGCAAGCGCATTTTTCGTTATTTCAGTACTGTGCCTGAC CTCGGCATTACTTTCGGCGGTAAGAGTAATGATCACGGTCTGGAAGGATT CGTTGATGCCGATTGGGCGGAAGATGTCGAGGACCGGAAATCCACAACAG GACACCTTTTCAAGCTGAACGGTGGTGCAATAAGTTGGTGCTCTAGGAAG CAACAGTTAGTCACGTGGTCCAGTACGGAGGCAGGGTACGTTGCTGCAGG AGAAGCGGGAAAGGAGACGGTATATCTTAGAGAGTACTAG
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Coding sequence (CDS) from alignment at H-paniculata_contig34050:938..2127-

>mRNA_H-paniculata_contig34050.9099.1 ID=mRNA_H-paniculata_contig34050.9099.1|Name=mRNA_H-paniculata_contig34050.9099.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2082bp|location=Sequence derived from alignment at H-paniculata_contig34050:938..2127- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGTTTTTCTCAGGTGGAGGGTGAAGGTTTCTTTGAAACCAGTGCCCCCGT
AGCTCGCATGTCGACGTTACGTACTGTTTTTAGCCTGGCCGTAGAACACG
ATTTCGAATTAGAAGGCATGGGCGTAGATGCGGCGTATTTGAACGCCCCG
GTAAAAGAAGAGCTGTTTGTTACGCTACCCTCCGAGTTTTCCCCTTTCTC
CCGAGACATACCATTTTTGCGCCGCCTGCGTAAAAGCCTGTACGGCCTCA
AGCAGAGCGGTCGAAACTGGAATAACACTCTTGACGATTTTCTTGTTGGG
ATAGGACTCGAACGTTCCATTACCGACTCGTGCTTGTACTTTTCCCGCAA
CGAAGGGGGAGAGACAAACCTTCTGGTGGCCGTGTATGTTGACGACCTGG
TCATTGCTAGTCGTCGTGAGAAAGTAGACGAATTCAAGCATAACATAAGT
CAGCGTTTTAGGATGAAAGACTTGGGCTCTCTCTCGCGCGTGTTGGGAAT
AGAAGTACGACATGACCGCCCTAATGGTACCATAACCATCTCGCAGGGTA
GCTATATCCGCGAGGTACTAAAAAGATACGGTTTTTACGAGTGTCGAGGA
GTACCCACCCCTGTAGAGGGAAAAGTGAAGATTTCGGCACCCGAGTCGGC
CGACAAGCCCTCCGAACCGAAGTTACTTGGAGCTGTACTGGTTTTTCTCA
GGTGGAGGGTGAAGGTTTCTTTGAAACCAGTGCCCCCGTAGCTCGCATGT
CGACGTTACGTACTGTTTTTAGCCTGGCCGTAGAACACGATTTCGAATTA
GAAGGCATGGGCGTAGATGCGGCGTATTTGAACGCCCCGGTAAAAGAAGA
GCTGTTTGTTACGCTACCCTCCGAGTTTTCCCCTTTCTCCCGAGACATAC
CATTTTTGCGCCGCCTGCGTAAAAGCCTGTACGGCCTCAAGCAGAGCGGT
CGAAACTGGAATAACACTCTTGACGATTTTCTTGTTGGGATAGGACTCGA
ACGTTCCATTACCGACTCGTGCTTGTACTTTTCCCGCAACGAAGGGGGAG
AGACAAACCTTCTGGTGGCCGTGTATGTTGACGACCTGGTCATTGCTAGT
CGTCGTGAGAAAGTAGACGAATTCAAGCATAACATAAGTCAGCGTTTTAG
GATGAAAGACTTGGGCTCTCTCTCGCGCGTGTTGGGAATAGAAGTACGAC
ATGACCGCCCTAATGGTACCATAACCATCTCGCAGGGTAGCTATATCCGC
GAGGTACTAAAAAGATACGGTTTTTACGAGTGTCGAGGAGTACCCACCCC
TGTAGAGGGAAAAGTGAAGATTTCGGCACCCGAGTCGGCCGACAAGCCCT
CCGAACCGAAGTTACTTGGAGCTGTACTACCTGATATAGCATACGCGGTA
CACCAAGCAGCACGTCGTATGGAGGACTCATATCAAGAAGACTTCAGCAC
ATGCAAGCGCATTTTTCGTTATTTCAGTACTGTGCCTGACCTCGGCATTA
CTTTCGGCGGTAAGAGTAATGATCACGGTCTGGAAGGATTCGTTGATGCC
GATTGGGCGGAAGATGTCGAGGACCGGAAATCCACAACAGGACACCTTTT
CAAGCTGAACGGTGGTGCAATAAGTTGGTGCTCTAGGAAGCAACAGTTAG
TCACGTGGTCCAGTACGGAGGCAGGGTACGTTGCTGCAGGAGAAGCGGGA
AAGGAGACGGTATATCTTAGAGAGTACTAGACCTGATATAGCATACGCGG
TACACCAAGCAGCACGTCGTATGGAGGACTCATATCAAGAAGACTTCAGC
ACATGCAAGCGCATTTTTCGTTATTTCAGTACTGTGCCTGACCTCGGCAT
TACTTTCGGCGGTAAGAGTAATGATCACGGTCTGGAAGGATTCGTTGATG
CCGATTGGGCGGAAGATGTCGAGGACCGGAAATCCACAACAGGACACCTT
TTCAAGCTGAACGGTGGTGCAATAAGTTGGTGCTCTAGGAAGCAACAGTT
AGTCACGTGGTCCAGTACGGAGGCAGGGTACGTTGCTGCAGGAGAAGCGG
GAAAGGAGACGGTATATCTTAGAGAGTACTAG
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