mRNA_H-paniculata_contig3403.9094.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3403.9094.1
Unique NamemRNA_H-paniculata_contig3403.9094.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig3403.9094.1 vs. uniprot
Match: D8LI71_ECTSI (ARL2, ARF-like Ras superfamily GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI71_ECTSI)

HSP 1 Score: 304 bits (778), Expect = 5.730e-102
Identity = 145/164 (88.41%), Postives = 152/164 (92.68%), Query Frame = 1 
Query:  160 GLDNAGKTTIVKKFNGDDINDIEPTLGFNIKTLAYNGYQLNIWDVGGQQTIRSYWRNYFEQTDGLIWVVDSADRGRLQDCKRELHDLLKQEKLAGASLLVFANKQDLAGALPADEIAEVLGLNSRQFEKRHWSIVGCSAVTGEGLAQGVDWTVNDIGARIFLMA 651
            GLDNAGKTTIVKKFNGDDIN IEPTLGFNIKT+ Y GYQLN+WDVGGQQTIRSYWRNYFEQTDGLIWVVDSADRGRLQDCKRELHDLL QEKLAGASLLVFANKQDL GAL A EIA+VLGL S+QF  RHWSIV CSAVTGEGLAQGVDW V+DIGARIF+M+
Sbjct:   23 GLDNAGKTTIVKKFNGDDINAIEPTLGFNIKTMEYKGYQLNVWDVGGQQTIRSYWRNYFEQTDGLIWVVDSADRGRLQDCKRELHDLLGQEKLAGASLLVFANKQDLVGALGAAEIAQVLGLESKQFANRHWSIVACSAVTGEGLAQGVDWMVSDIGARIFMMS 186
[Close]
BLAST of mRNA_H-paniculata_contig3403.9094.1 vs. uniprot
Match: A0A7S2CN96_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CN96_9STRA)

HSP 1 Score: 273 bits (697), Expect = 1.890e-89
Identity = 129/165 (78.18%), Postives = 147/165 (89.09%), Query Frame = 1 
Query:  160 GLDNAGKTTIVKKFNGDDINDIEPTLGFNIKTLAYNGYQLNIWDVGGQQTIRSYWRNYFEQTDGLIWVVDSADRGRLQDCKRELHDLLKQEKLAGASLLVFANKQDLAGALPADEIAEVLGLNSRQFEK-RHWSIVGCSAVTGEGLAQGVDWTVNDIGARIFLMA 651
            GLDNAGKTTI+KKFNG+DI+ IEPTLGFNIKTL Y G++LN+WDVGGQQTIRSYWRNYFEQTDGLIWVVDS+DR R++DCKRELH+LL QEKLAGASLL+FANKQDLAGAL A+EIA+VL L+S +F   RHWSI  CSAVTGEGL  GVDW V DI +RIF+M+
Sbjct:   36 GLDNAGKTTILKKFNGEDISTIEPTLGFNIKTLEYKGFKLNVWDVGGQQTIRSYWRNYFEQTDGLIWVVDSSDRWRMEDCKRELHNLLDQEKLAGASLLIFANKQDLAGALTAEEIAQVLDLHSDRFASGRHWSIHACSAVTGEGLVDGVDWMVTDISSRIFMMS 200
[Close]
BLAST of mRNA_H-paniculata_contig3403.9094.1 vs. uniprot
Match: A0A835YQ34_9STRA (ARL2, ARF-like ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ34_9STRA)

HSP 1 Score: 265 bits (677), Expect = 1.370e-86
Identity = 127/166 (76.51%), Postives = 142/166 (85.54%), Query Frame = 1 
Query:  160 GLDNAGKTTIVKKFNGDDINDIEPTLGFNIKTLAYNGYQLNIWDVGGQQTIRSYWRNYFEQTDGLIWVVDSADRGRLQDCKRELHDLLKQEKLAGASLLVFANKQ--DLAGALPADEIAEVLGLNSRQFEKRHWSIVGCSAVTGEGLAQGVDWTVNDIGARIFLMA 651
            GLDNAGKTTIVKKFNG+DI  I PTLGFNI TL + G++LN+WDVGGQQTIRSYWRNYFEQTDG+IWVVDSADR RLQDC+RELH LL QEKLAGASLLVFANKQ  DLAGA+ + EIAE+L L S +F  RHW+I  CSAVTG GLA GVDW V+DI +RIF+MA
Sbjct:   23 GLDNAGKTTIVKKFNGEDITTISPTLGFNINTLEHKGFKLNVWDVGGQQTIRSYWRNYFEQTDGIIWVVDSADRARLQDCRRELHALLDQEKLAGASLLVFANKQAIDLAGAVQSAEIAELLDLGSERFSTRHWAIRACSAVTGAGLADGVDWVVDDIASRIFMMA 188
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BLAST of mRNA_H-paniculata_contig3403.9094.1 vs. uniprot
Match: H3GA42_PHYRM (Uncharacterized protein n=30 Tax=Oomycota TaxID=4762 RepID=H3GA42_PHYRM)

HSP 1 Score: 263 bits (672), Expect = 7.360e-86
Identity = 123/168 (73.21%), Postives = 140/168 (83.33%), Query Frame = 1 
Query:  145 RVHSSGLDNAGKTTIVKKFNGDDINDIEPTLGFNIKTLAYNGYQLNIWDVGGQQTIRSYWRNYFEQTDGLIWVVDSADRGRLQDCKRELHDLLKQEKLAGASLLVFANKQDLAGALPADEIAEVLGLNSRQFEKRHWSIVGCSAVTGEGLAQGVDWTVNDIGARIFLM 648
            RV   GLDNAGKTTI+KKF G DI +I PTLGF+I+TL Y  ++LN+WDVGGQQTIRSYWRNYFEQTDGL+WVVDSADR RL+DCKREL  LL QEKLAGA+LL+FANKQDL GAL + EIA+ LGL S QF  RHWSIV CSAVTG+GL  G+DW V D+ +RIFLM
Sbjct:   18 RVLMLGLDNAGKTTILKKFMGQDITEISPTLGFDIQTLEYKDFKLNVWDVGGQQTIRSYWRNYFEQTDGLVWVVDSADRRRLEDCKRELSSLLTQEKLAGATLLIFANKQDLPGALSSAEIADALGLRSAQFSTRHWSIVSCSAVTGDGLVDGIDWLVGDVASRIFLM 185
[Close]
BLAST of mRNA_H-paniculata_contig3403.9094.1 vs. uniprot
Match: A0A813AHK8_9DINO (Arl2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813AHK8_9DINO)

HSP 1 Score: 259 bits (662), Expect = 1.320e-84
Identity = 123/162 (75.93%), Postives = 135/162 (83.33%), Query Frame = 1 
Query:  160 GLDNAGKTTIVKKFNGDDINDIEPTLGFNIKTLAYNGYQLNIWDVGGQQTIRSYWRNYFEQTDGLIWVVDSADRGRLQDCKRELHDLLKQEKLAGASLLVFANKQDLAGALPADEIAEVLGLNSRQFEKRHWSIVGCSAVTGEGLAQGVDWTVNDIGARIFL 645
            GLDNAGKTTIVKKFNG+DI+ I PTLGF IKTL Y GY+LNIWDVGGQ+TIRSYWRNYFE+TDGLIWVVDS+DR RL+DCK EL  +LKQEKLAGASLL+FANKQDL GAL  +EIA VL L   QF  RHWSI  CSAVTG+GL  GVDW V DI  RIF+
Sbjct:    5 GLDNAGKTTIVKKFNGEDIDTISPTLGFQIKTLEYAGYKLNIWDVGGQKTIRSYWRNYFEETDGLIWVVDSSDRRRLRDCKEELFKVLKQEKLAGASLLIFANKQDLEGALSCEEIATVLELEGEQFASRHWSITPCSAVTGDGLVTGVDWLVEDIAGRIFV 166
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BLAST of mRNA_H-paniculata_contig3403.9094.1 vs. uniprot
Match: F0WZN0_9STRA (ADPribosylation factor 2 putative n=2 Tax=Albugo TaxID=65356 RepID=F0WZN0_9STRA)

HSP 1 Score: 259 bits (663), Expect = 1.710e-84
Identity = 118/168 (70.24%), Postives = 137/168 (81.55%), Query Frame = 1 
Query:  145 RVHSSGLDNAGKTTIVKKFNGDDINDIEPTLGFNIKTLAYNGYQLNIWDVGGQQTIRSYWRNYFEQTDGLIWVVDSADRGRLQDCKRELHDLLKQEKLAGASLLVFANKQDLAGALPADEIAEVLGLNSRQFEKRHWSIVGCSAVTGEGLAQGVDWTVNDIGARIFLM 648
            R+   GLDNAGKTTI+K F G D+ DI PTLGF+I+T  Y  Y LNIWDVGGQQ+IRSYWRNYFEQTDGL+WV+DSADR RL+DCKREL  LL QEKLAGAS+L+FANKQDL GALP   IA+VL L+  QF  RHW IV CSA++G+GLA+G+DW V DI +RIFLM
Sbjct:   18 RILMLGLDNAGKTTIIKMFMGSDVTDISPTLGFDIETFEYQSYHLNIWDVGGQQSIRSYWRNYFEQTDGLVWVIDSADRSRLEDCKRELFSLLTQEKLAGASILIFANKQDLPGALPVTSIAKVLQLDDTQFSNRHWKIVSCSAISGDGLAEGIDWLVQDIASRIFLM 185
[Close]
BLAST of mRNA_H-paniculata_contig3403.9094.1 vs. uniprot
Match: W7T532_9STRA (Adp-ribosylation factor-like protein 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T532_9STRA)

HSP 1 Score: 259 bits (662), Expect = 2.510e-84
Identity = 124/164 (75.61%), Postives = 139/164 (84.76%), Query Frame = 1 
Query:  160 GLDNAGKTTIVKKFNGDDINDIEPTLGFNIKTLAYNGYQLNIWDVGGQQTIRSYWRNYFEQTDGLIWVVDSADRGRLQDCKRELHDLLKQEKLAGASLLVFANKQDLAGALPADEIAEVLGLNSRQFEK-RHWSIVGCSAVTGEGLAQGVDWTVNDIGARIFLM 648
            GLDNAGKTTI+KKFNG++I+ IEPTLGFNIKTL Y GY LN+WDVGGQQTIRSYWRNYFE TDGLIWVVDSADR RL+ C++ELH LL+QEKLAGASLLVFANKQDL GALP  EIA  LGL    F K RHW+IVGCSA+TG+GL  GV W V DI +RIF++
Sbjct:   23 GLDNAGKTTILKKFNGEEISTIEPTLGFNIKTLEYQGYLLNVWDVGGQQTIRSYWRNYFEATDGLIWVVDSADRRRLEVCRQELHALLQQEKLAGASLLVFANKQDLQGALPPGEIALTLGLEDEAFAKGRHWTIVGCSAMTGDGLEHGVGWMVRDIASRIFML 186
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BLAST of mRNA_H-paniculata_contig3403.9094.1 vs. uniprot
Match: A0A2R5GWI2_9STRA (ADP-ribosylation factor n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GWI2_9STRA)

HSP 1 Score: 259 bits (661), Expect = 3.440e-84
Identity = 123/168 (73.21%), Postives = 141/168 (83.93%), Query Frame = 1 
Query:  145 RVHSSGLDNAGKTTIVKKFNGDDINDIEPTLGFNIKTLAYNGYQLNIWDVGGQQTIRSYWRNYFEQTDGLIWVVDSADRGRLQDCKRELHDLLKQEKLAGASLLVFANKQDLAGALPADEIAEVLGLNSRQFEKRHWSIVGCSAVTGEGLAQGVDWTVNDIGARIFLM 648
            R+   GLDNAGKTTI+KKFNG+DI+ I PTLGFNIKTL + GYQLN+WDVGGQ TIRSYWRNYFE+TDGLIWVVD ADR RL  C+ ELH LL+QEKLAGAS+LVFANKQDLAGAL +++IAEVL L S  F+ RHW I  CSAVTG+GL  GVDW V+DI +RI+LM
Sbjct:   18 RILMLGLDNAGKTTILKKFNGEDIDTISPTLGFNIKTLEHRGYQLNVWDVGGQTTIRSYWRNYFEETDGLIWVVDCADRERLATCRDELHKLLQQEKLAGASVLVFANKQDLAGALSSEQIAEVLELGSPIFKNRHWQIHPCSAVTGDGLVDGVDWIVDDIASRIYLM 185
[Close]
BLAST of mRNA_H-paniculata_contig3403.9094.1 vs. uniprot
Match: K3X431_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X431_GLOUD)

HSP 1 Score: 259 bits (661), Expect = 3.440e-84
Identity = 123/168 (73.21%), Postives = 138/168 (82.14%), Query Frame = 1 
Query:  145 RVHSSGLDNAGKTTIVKKFNGDDINDIEPTLGFNIKTLAYNGYQLNIWDVGGQQTIRSYWRNYFEQTDGLIWVVDSADRGRLQDCKRELHDLLKQEKLAGASLLVFANKQDLAGALPADEIAEVLGLNSRQFEKRHWSIVGCSAVTGEGLAQGVDWTVNDIGARIFLM 648
            RV   GLDNAGKTTI+KKF G DI +I PTLGF+I+TL Y  ++LN+WDVGGQQTIRSYWRNYFEQTDGL+WVVDSADR RL DCKREL  LL QEKLAGA+LL+FANKQDL GAL A EIA+ L L S QF  RHW+IV CSAVTG GL +G+DW V DI +RIFLM
Sbjct:   18 RVLMLGLDNAGKTTILKKFMGQDITEISPTLGFDIQTLEYKNFKLNVWDVGGQQTIRSYWRNYFEQTDGLVWVVDSADRRRLDDCKRELKQLLTQEKLAGATLLIFANKQDLPGALTASEIADYLELRSEQFVNRHWNIVACSAVTGAGLLEGIDWLVADIASRIFLM 185
[Close]
BLAST of mRNA_H-paniculata_contig3403.9094.1 vs. uniprot
Match: A0A5D6XTH0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTH0_9STRA)

HSP 1 Score: 258 bits (658), Expect = 9.830e-84
Identity = 121/168 (72.02%), Postives = 140/168 (83.33%), Query Frame = 1 
Query:  145 RVHSSGLDNAGKTTIVKKFNGDDINDIEPTLGFNIKTLAYNGYQLNIWDVGGQQTIRSYWRNYFEQTDGLIWVVDSADRGRLQDCKRELHDLLKQEKLAGASLLVFANKQDLAGALPADEIAEVLGLNSRQFEKRHWSIVGCSAVTGEGLAQGVDWTVNDIGARIFLM 648
            RV   GLDNAGKTTI+KKF G DI++I PTLGF+I+TL Y  ++LN+WDVGGQQTIR+YWRNYFEQTDGL+WVVDSADR RL+DCKREL  LL QEKLAGA+LL+FANKQDL GA+ A EIA++L L S QF  RHW+IV CSA TG+GL  GVDW V DI +RIFLM
Sbjct:   18 RVLMLGLDNAGKTTILKKFLGQDISEISPTLGFDIQTLEYKDFKLNVWDVGGQQTIRAYWRNYFEQTDGLVWVVDSADRRRLEDCKRELQKLLTQEKLAGATLLIFANKQDLPGAVAAAEIADILELRSEQFANRHWNIVSCSAFTGDGLVAGVDWLVRDIASRIFLM 185
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3403.9094.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI71_ECTSI5.730e-10288.41ARL2, ARF-like Ras superfamily GTPase n=2 Tax=Ecto... [more]
A0A7S2CN96_9STRA1.890e-8978.18Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A835YQ34_9STRA1.370e-8676.51ARL2, ARF-like ras superfamily GTPase n=1 Tax=Trib... [more]
H3GA42_PHYRM7.360e-8673.21Uncharacterized protein n=30 Tax=Oomycota TaxID=47... [more]
A0A813AHK8_9DINO1.320e-8475.93Arl2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
F0WZN0_9STRA1.710e-8470.24ADPribosylation factor 2 putative n=2 Tax=Albugo T... [more]
W7T532_9STRA2.510e-8475.61Adp-ribosylation factor-like protein 2 n=2 Tax=Mon... [more]
A0A2R5GWI2_9STRA3.440e-8473.21ADP-ribosylation factor n=1 Tax=Hondaea fermentalg... [more]
K3X431_GLOUD3.440e-8473.21Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A5D6XTH0_9STRA9.830e-8472.02Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3403contigH-paniculata_contig3403:11568..13284 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score303.5
Seed ortholog evalue7.5e-80
Seed eggNOG ortholog2880.D8LI71
Preferred nameARL2
KEGG koko:K07943,ko:K21596
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000132,GO:0000166,GO:0000226,GO:0000278,GO:0000281,GO:0000910,GO:0001505,GO:0001882,GO:0001883,GO:0002090,GO:0002791,GO:0003006,GO:0003674,GO:0003824,GO:0003924,GO:0004857,GO:0005095,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005758,GO:0005759,GO:0005794,GO:0005813,GO:0005815,GO:0005818,GO:0005819,GO:0005829,GO:0005856,GO:0005886,GO:0005912,GO:0005924,GO:0005925,GO:0006457,GO:0006810,GO:0006811,GO:0006812,GO:0006836,GO:0006897,GO:0006996,GO:0007010,GO:0007017,GO:0007021,GO:0007043,GO:0007049,GO:0007098,GO:0007154,GO:0007163,GO:0007267,GO:0007268,GO:0007269,GO:0007275,GO:0007399,GO:0007405,GO:0007548,GO:0008064,GO:0008104,GO:0008150,GO:0008283,GO:0008356,GO:0009790,GO:0009792,GO:0009914,GO:0009987,GO:0010638,GO:0010646,GO:0010648,GO:0010810,GO:0010811,GO:0010817,GO:0012505,GO:0015630,GO:0015695,GO:0015696,GO:0015870,GO:0015893,GO:0016020,GO:0016043,GO:0016192,GO:0016328,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0017145,GO:0019001,GO:0019003,GO:0019222,GO:0022008,GO:0022402,GO:0022414,GO:0022607,GO:0023051,GO:0023052,GO:0023057,GO:0023061,GO:0030010,GO:0030030,GO:0030054,GO:0030055,GO:0030100,GO:0030154,GO:0030155,GO:0030234,GO:0030540,GO:0030695,GO:0030832,GO:0030833,GO:0030865,GO:0031023,GO:0031110,GO:0031112,GO:0031113,GO:0031116,GO:0031122,GO:0031323,GO:0031334,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0031981,GO:0032271,GO:0032273,GO:0032501,GO:0032502,GO:0032507,GO:0032535,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032879,GO:0032880,GO:0032886,GO:0032940,GO:0032956,GO:0032970,GO:0033036,GO:0033043,GO:0033365,GO:0034260,GO:0034315,GO:0034329,GO:0034330,GO:0034332,GO:0034333,GO:0034504,GO:0034613,GO:0034622,GO:0035639,GO:0036094,GO:0036445,GO:0036465,GO:0040001,GO:0042221,GO:0042493,GO:0043086,GO:0043087,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043297,GO:0043622,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044092,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044430,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0045165,GO:0045185,GO:0045196,GO:0045216,GO:0045785,GO:0046660,GO:0046883,GO:0046903,GO:0048103,GO:0048167,GO:0048259,GO:0048488,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048608,GO:0048699,GO:0048731,GO:0048806,GO:0048856,GO:0048869,GO:0050708,GO:0050789,GO:0050790,GO:0050794,GO:0050796,GO:0050804,GO:0050805,GO:0050808,GO:0050896,GO:0051046,GO:0051049,GO:0051125,GO:0051128,GO:0051130,GO:0051179,GO:0051223,GO:0051234,GO:0051235,GO:0051293,GO:0051294,GO:0051301,GO:0051336,GO:0051346,GO:0051457,GO:0051493,GO:0051495,GO:0051640,GO:0051641,GO:0051649,GO:0051651,GO:0051653,GO:0051656,GO:0055057,GO:0055059,GO:0060255,GO:0060292,GO:0060589,GO:0060627,GO:0061351,GO:0061458,GO:0061640,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070161,GO:0070201,GO:0070507,GO:0070727,GO:0070830,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072089,GO:0072595,GO:0090066,GO:0090087,GO:0090276,GO:0097061,GO:0097159,GO:0097367,GO:0097435,GO:0098657,GO:0098722,GO:0098772,GO:0098916,GO:0099003,GO:0099080,GO:0099173,GO:0099177,GO:0099504,GO:0099536,GO:0099537,GO:0099643,GO:0106027,GO:0110053,GO:0120036,GO:1901265,GO:1901363,GO:1901374,GO:1902850,GO:1902903,GO:1902905,GO:1903047,GO:1903530
EggNOG free text desc.GTP binding
EggNOG OGsKOG0073@1,KOG0073@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03000,ko03036,ko04031
Exons3
Model size822
Cds size627
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3403.9094.1prot_H-paniculata_contig3403.9094.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3403 11736..13257 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930050.6603887-UTR-H-paniculata_contig3403:11567..117351622930050.6603887-UTR-H-paniculata_contig3403:11567..11735Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3403 11568..11735 -
1691481126.4090838-UTR-H-paniculata_contig3403:11567..117351691481126.4090838-UTR-H-paniculata_contig3403:11567..11735Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3403 11568..11735 -
1622930050.734265-UTR-H-paniculata_contig3403:13257..132841622930050.734265-UTR-H-paniculata_contig3403:13257..13284Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3403 13258..13284 -
1691481126.4504488-UTR-H-paniculata_contig3403:13257..132841691481126.4504488-UTR-H-paniculata_contig3403:13257..13284Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3403 13258..13284 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930050.681589-CDS-H-paniculata_contig3403:11735..119571622930050.681589-CDS-H-paniculata_contig3403:11735..11957Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3403 11736..11957 -
1691481126.4219873-CDS-H-paniculata_contig3403:11735..119571691481126.4219873-CDS-H-paniculata_contig3403:11735..11957Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3403 11736..11957 -
1622930050.6972156-CDS-H-paniculata_contig3403:12468..125581622930050.6972156-CDS-H-paniculata_contig3403:12468..12558Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3403 12469..12558 -
1691481126.4313397-CDS-H-paniculata_contig3403:12468..125581691481126.4313397-CDS-H-paniculata_contig3403:12468..12558Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3403 12469..12558 -
1622930050.7176826-CDS-H-paniculata_contig3403:12942..132571622930050.7176826-CDS-H-paniculata_contig3403:12942..13257Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3403 12943..13257 -
1691481126.4409106-CDS-H-paniculata_contig3403:12942..132571691481126.4409106-CDS-H-paniculata_contig3403:12942..13257Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3403 12943..13257 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3403.9094.1

>prot_H-paniculata_contig3403.9094.1 ID=prot_H-paniculata_contig3403.9094.1|Name=mRNA_H-paniculata_contig3403.9094.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=209bp
MLRPRHRKTFRPSSPHNTVQHLSPEPIPMRLCCMTNAAARVHSSGLDNAG
KTTIVKKFNGDDINDIEPTLGFNIKTLAYNGYQLNIWDVGGQQTIRSYWR
NYFEQTDGLIWVVDSADRGRLQDCKRELHDLLKQEKLAGASLLVFANKQD
LAGALPADEIAEVLGLNSRQFEKRHWSIVGCSAVTGEGLAQGVDWTVNDI
GARIFLMA*
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mRNA from alignment at H-paniculata_contig3403:11568..13284-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3403.9094.1 ID=mRNA_H-paniculata_contig3403.9094.1|Name=mRNA_H-paniculata_contig3403.9094.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1717bp|location=Sequence derived from alignment at H-paniculata_contig3403:11568..13284- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAAAGCAACTGGGTATGCAGTAAAAACATGCTTCGTCCCCGACACCGGAA
GACTTTCCGCCCGTCTTCACCGCACAATACAGTACAACATTTATCTCCTG
AACCCATACCGATGCGCCTGTGCTGCATGACGAATGCTGCTGCCCGTGTT
CATTCTAGCGGCTTGGACAACGCTGGCAAAACCACCATCGTGAAAAAATT
CAACGGGGATGATATCAACGATATAGAGCCGACACTGGGGTTCAACATCA
AAACGCTCGCCTACAATGGGTACCAGCTCAACATTTGGGACGTCGGGGGG
CAGCAGACGATACGATCGTACTGGCGGAACTACTTCGAACAGGTTGGGCG
CGGAAGCTAAAAGCAGTAAGCCTGGTGCCACTGCATTGTAATCGTCCCGT
TTCGCGAGAGATCTACTGTCCTTGTAAACTCTGACGGTCCACAACAATCT
ATAGCAATAATCTATAGGACTGTTACCGGGTAATTAGTTATTGACCGTTA
CCAGTTTTGATTCATCAGACGTGAATCACACTTCGTTGCTAAAAGACAAG
TAACCCCGATCCTTATAGACCTCCCAAAAATATTCTAAGGCCACCAGCGC
TCCGCCGAATGTTTCCCCATTGAAATAGCTCAATCTTTGCAAGCGGGGCT
GTTACGCCCCGTTCAACCACCTCATTTTCAGTTTTCATCGTTCCCATTCT
CGCTCCCTATTTATTCGTGTGCGCAGACTGATGGTCTAATCTGGGTTGTT
GACAGCGCAGACCGAGGTAGATTGCAAGACTGCAAGCGGGAGCTGCACGA
TTTATTAAAACAAGAGGTAATTGCACCGGGTTAACAACTACGATATATGT
ATAATATGTACACAGACAGCTATATACTAGTCGTGGAGAGGGACACACTA
GGAAACTCGCCTTGATTAGTTTGTGGCAACCCGATTTGACGCTATTACAG
ATGGCCGGCTCTGCCAAAGGTGTTGAGACAGACCCCACCATATTCCTGTT
GTACAAATGAAATTTTCGACAGAATCAGCCCCATACTACCTGTCAATCAG
ACAGAGCCAACGGCGAACCGGTTGTGGACATGAAACACCTGACAGAATCC
CAACGCGAACCAATTCCGGTTCTGCTCAGATGTTATCCCGGCTATGCGAA
AAGCCCTGCTCAATCAGGGTACCTGCTGTAGTAGGTTATGCATATTGTAG
AGTCGTTCAATAGTGTTGCCCGCTCATCATCGGGGGCTAAGACTTGAACT
CAATCGACGCAAAGCGGACTGAAAGTTTAATCCTTTGTCCACAATCTAGT
GTTCTTGCATCGTGCTACACTCCACAGAAACTGGCCGGAGCATCCTTGCT
AGTGTTCGCCAACAAGCAGGACCTTGCCGGGGCGCTACCTGCTGATGAGA
TCGCGGAGGTTCTGGGGCTAAACTCGCGGCAGTTTGAGAAGCGGCATTGG
AGTATTGTTGGATGTAGCGCGGTCACCGGCGAGGGACTCGCGCAGGGCGT
GGATTGGACTGTCAACGACATTGGAGCACGAATATTCTTGATGGCATAAA
TAAAAACAAGGAAGTTGCACAAACAAATGAGCAAGGCTAAGACATAGGAG
AGACATTTTGTGGACGCAGCTTTCCTCTTGGTGAACGTTTTTTTCTAAAG
GAGCGCTCCGATCGGTCGAAATGACTTGACTCTCTAAAGAATAAATAGGG
CACGCACCGCCTCTACC
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Coding sequence (CDS) from alignment at H-paniculata_contig3403:11568..13284-

>mRNA_H-paniculata_contig3403.9094.1 ID=mRNA_H-paniculata_contig3403.9094.1|Name=mRNA_H-paniculata_contig3403.9094.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1254bp|location=Sequence derived from alignment at H-paniculata_contig3403:11568..13284- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTTCGTCCCCGACACCGGAAGACTTTCCGCCCGTCTTCACCGCACAA
TACAGTACAACATTTATCTCCTGAACCCATACCGATGCGCCTGTGCTGCA
TGACGAATGCTGCTGCCCGTGTTCATTCTAGCGGCTTGGACAACGCTGGC
AAAACCACCATCGTGAAAAAATTCAACGGGGATGATATCAACGATATAGA
GCCGACACTGGGGTTCAACATCAAAACGCTCGCCTACAATGGGTACCAGC
TCAACATTTGGGACGTCGGGGGGCAGCAGACGATACGATCGTACTGGCGG
AACTACTTCGAACAGATGCTTCGTCCCCGACACCGGAAGACTTTCCGCCC
GTCTTCACCGCACAATACAGTACAACATTTATCTCCTGAACCCATACCGA
TGCGCCTGTGCTGCATGACGAATGCTGCTGCCCGTGTTCATTCTAGCGGC
TTGGACAACGCTGGCAAAACCACCATCGTGAAAAAATTCAACGGGGATGA
TATCAACGATATAGAGCCGACACTGGGGTTCAACATCAAAACGCTCGCCT
ACAATGGGTACCAGCTCAACATTTGGGACGTCGGGGGGCAGCAGACGATA
CGATCGTACTGGCGGAACTACTTCGAACAGACTGATGGTCTAATCTGGGT
TGTTGACAGCGCAGACCGAGGTAGATTGCAAGACTGCAAGCGGGAGCTGC
ACGATTTATTAAAACAAGAGACTGATGGTCTAATCTGGGTTGTTGACAGC
GCAGACCGAGGTAGATTGCAAGACTGCAAGCGGGAGCTGCACGATTTATT
AAAACAAGAGAAACTGGCCGGAGCATCCTTGCTAGTGTTCGCCAACAAGC
AGGACCTTGCCGGGGCGCTACCTGCTGATGAGATCGCGGAGGTTCTGGGG
CTAAACTCGCGGCAGTTTGAGAAGCGGCATTGGAGTATTGTTGGATGTAG
CGCGGTCACCGGCGAGGGACTCGCGCAGGGCGTGGATTGGACTGTCAACG
ACATTGGAGCACGAATATTCTTGATGGCATAAAAACTGGCCGGAGCATCC
TTGCTAGTGTTCGCCAACAAGCAGGACCTTGCCGGGGCGCTACCTGCTGA
TGAGATCGCGGAGGTTCTGGGGCTAAACTCGCGGCAGTTTGAGAAGCGGC
ATTGGAGTATTGTTGGATGTAGCGCGGTCACCGGCGAGGGACTCGCGCAG
GGCGTGGATTGGACTGTCAACGACATTGGAGCACGAATATTCTTGATGGC
ATAA
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