mRNA_H-paniculata_contig3399.9074.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3399.9074.1
Unique NamemRNA_H-paniculata_contig3399.9074.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig3399.9074.1 vs. uniprot
Match: A0A060S825_PYCCI (CCHC-type domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060S825_PYCCI)

HSP 1 Score: 171 bits (433), Expect = 1.270e-43
Identity = 91/215 (42.33%), Postives = 139/215 (64.65%), Query Frame = 1
Query:    1 IFEHKLKEDGSVVRYKARVVAQGFSQMEGKGFFGTSAPAARMSTLRTVFSLVAKHDFELEGMGVDAAHLNALVE*ELFVKLPPEFSPFFRDIPFVRCLRKSLYGLRQSNRSWNNTVGDFLVGIGLQRSTTDPCLCFSLDEGGETDILVAVYVDDLIIAGRREKVDEFKHNISRRFRVKDLGSLSRVLGIEVQRDRSNGTISIPQDDYIREVLKRF 645
            +F  K   DGS+ ++KAR+VAQG++QM G  F  T AP A++S++RT+ +L A++D+ELE M V +A+LN  ++ E++++ PP  +P   +   V CL+K+LYGL+Q+ R W  T+ + +  +G  R  +D  + +     G++ ++VA  VD L IAG R+ V +FK  IS RF + DLG++  +LGIEVQRDR   TI+I Q  YI  V  RF
Sbjct: 1013 VFRIKRDADGSITQFKARLVAQGYTQMPGVDFNETFAPVAKLSSIRTILALAARYDWELEQMEVKSAYLNGRLDEEIYMRQPPGSAPAGLE-HLVCCLKKTLYGLKQAGRGWYKTLSNRMAEMGFTRCASDHAVWYK--RAGDSIVIVASSVDHLTIAGTRDFVMDFKSAISARFEMSDLGAMRWILGIEVQRDRQARTIAISQRTYIDTVAARF 1224          
BLAST of mRNA_H-paniculata_contig3399.9074.1 vs. uniprot
Match: A0A2G8RWY5_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RWY5_9APHY)

HSP 1 Score: 164 bits (415), Expect = 3.110e-41
Identity = 90/217 (41.47%), Postives = 136/217 (62.67%), Query Frame = 1
Query:    1 IFEHKLKEDGSVVRYKARVVAQGFSQMEGKGFFG--TSAPAARMSTLRTVFSLVAKHDFELEGMGVDAAHLNALVE*ELFVKLPPEFSPFFRDIPFVRCLRKSLYGLRQSNRSWNNTVGDFLVGIGLQRSTTDPCLCFSLDEGGETDILVAVYVDDLIIAGRREKVDEFKHNISRRFRVKDLGSLSRVLGIEVQRDRSNGTISIPQDDYIREVLKRF 645
            +F  K   +G+V  +KAR+VAQGFSQ+ G+ +    T AP +R+ ++RT+ SL A+HD+EL  M V +A+LN ++E  ++++LPP F+P  +     R L+K+LYGL+Q+ R W  T+   +  +G  R   D  + +  +  GE+ I+VA  VDDL I G  + VD F  +I +RF + DLG L  +LGIEV+RDR   TI+I Q  YI  ++ RF
Sbjct: 1077 VFRVKHDAEGAVSGFKARLVAQGFSQVPGRDYHDDETFAPVSRLPSIRTILSLAARHDWELRQMDVKSAYLNGILEETVYMRLPPGFAPPEQSHLVCR-LKKTLYGLKQAGRGWYKTLTAAMENMGFTRCVADHAVFYKRE--GESAIIVAASVDDLTITGTSDLVDAFAVDIKQRFEMSDLGDLHWILGIEVRRDRQARTIAISQRSYIDTIVSRF 1290          
BLAST of mRNA_H-paniculata_contig3399.9074.1 vs. uniprot
Match: H3H934_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H934_PHYRM)

HSP 1 Score: 155 bits (391), Expect = 3.930e-41
Identity = 80/217 (36.87%), Postives = 135/217 (62.21%), Query Frame = 1
Query:    1 IFEHKLKEDGSVVRYKARVVAQGFSQMEGKGFFGTSAPAARMSTLRTVFSLVAKHDFELEGMGVDAAHLNALVE*ELFVKLPPEFSPFFRDIPFVRC-LRKSLYGLRQSNRSWNNTVGDFLVGIGLQRSTTDPCLCFSLDEGGETDILVAVYVDDLIIAGRREKV-DEFKHNISRRFRVKDLGSLSRVLGIEVQRDRSNGTISIPQDDYIREVLKRF 645
            +F  K  + G + R+KAR+VA+GFSQ  G  +  T AP A+ +++R V SL AK+  +L  M V  A LN +++ ++++  P  +     D P   C L++SLYGL+QS R WN T+ DF++ +G ++  +D C+    D  G+  I VA+YVDDL++A   +++ +  KH +S+RF + DLG L   LG+E++ DR +G +++ Q  +++ +L +F
Sbjct:   34 VFRVKDNQAGEIERFKARLVAKGFSQKYGIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGYVD--EDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDMIFVALYVDDLVLASSNDELLESTKHALSKRFEMTDLGELEYFLGMEIKNDRDSGKVTVRQTKFLKSILTKF 246          
BLAST of mRNA_H-paniculata_contig3399.9074.1 vs. uniprot
Match: H3H9Y1_PHYRM (CCHC-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H9Y1_PHYRM)

HSP 1 Score: 157 bits (396), Expect = 1.150e-39
Identity = 81/217 (37.33%), Postives = 135/217 (62.21%), Query Frame = 1
Query:    1 IFEHKLKEDGSVVRYKARVVAQGFSQMEGKGFFGTSAPAARMSTLRTVFSLVAKHDFELEGMGVDAAHLNALVE*ELFVKLPPEFSPFFRDIPFVRC-LRKSLYGLRQSNRSWNNTVGDFLVGIGLQRSTTDPCLCFSLDEGGETDILVAVYVDDLIIAGRREKV-DEFKHNISRRFRVKDLGSLSRVLGIEVQRDRSNGTISIPQDDYIREVLKRF 645
            +F  K  + G + R+KAR+VA+GFSQ  G  +  T AP A+ +++R V SL AK+  +L  M V  A LN +++ ++++  P  +     D P   C L++SLYGL+QS R WN T+ DF++ +G ++  +D C+    D  G+  I VA+YVDDL++A   +++ D  KH +S+RF + DLG L   LG+E++ DR +G +++ Q  +++ +L +F
Sbjct:  332 VFRVKENQAGEIERFKARLVAKGFSQKYGIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGYVD--EDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDMIFVALYVDDLVLASSNDELLDSTKHALSKRFEMTDLGELEYFLGMEIKNDRDSGKVTVRQTKFLKSILTKF 544          
BLAST of mRNA_H-paniculata_contig3399.9074.1 vs. uniprot
Match: H3H8P6_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H8P6_PHYRM)

HSP 1 Score: 150 bits (380), Expect = 2.030e-39
Identity = 78/217 (35.94%), Postives = 133/217 (61.29%), Query Frame = 1
Query:    1 IFEHKLKEDGSVVRYKARVVAQGFSQMEGKGFFGTSAPAARMSTLRTVFSLVAKHDFELEGMGVDAAHLNALVE*ELFVKLPPEFSPFFRDIPFVRC-LRKSLYGLRQSNRSWNNTVGDFLVGIGLQRSTTDPCLCFSLDEGGETDILVAVYVDDLIIAGRREKV-DEFKHNISRRFRVKDLGSLSRVLGIEVQRDRSNGTISIPQDDYIREVLKRF 645
            +F  K  + G + R+KAR+VA+GFSQ     +  T AP A+ +++R V SL AK+  +L  M V  A LN +++ ++++  P  +     D P   C L++SLYGL+QS R WN T+ DF++ +G ++  +D C+    D  G+  I VA+YVDDL++A   +++ +  KH +S+RF + DLG L   LG+E++ D  +G +++ Q  +++ +L +F
Sbjct:   73 VFRVKENQAGEIERFKARLVAKGFSQKYDIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGYVD--EDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDMIFVALYVDDLVLASSNDELLESTKHALSKRFEMTDLGELEYFLGMEIKNDHGSGKVTVRQTKFLKSILTKF 285          
BLAST of mRNA_H-paniculata_contig3399.9074.1 vs. uniprot
Match: A0A401GQU1_9APHY (Uncharacterized protein n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GQU1_9APHY)

HSP 1 Score: 159 bits (401), Expect = 2.200e-39
Identity = 86/215 (40.00%), Postives = 133/215 (61.86%), Query Frame = 1
Query:    1 IFEHKLKEDGSVVRYKARVVAQGFSQMEGKGFFGTSAPAARMSTLRTVFSLVAKHDFELEGMGVDAAHLNALVE*ELFVKLPPEFSPFFRDIPFVRCLRKSLYGLRQSNRSWNNTVGDFLVGIGLQRSTTDPCLCFSLDEGGETDILVAVYVDDLIIAGRREKVDEFKHNISRRFRVKDLGSLSRVLGIEVQRDRSNGTISIPQDDYIREVLKRF 645
            +F  K   +G +  YKAR+VAQGFSQ+ G  F  T AP A+++++R + +L A+HD+++  M V  A+LNA +E E+F+K PP  +   ++  +V  LR ++YGL+QS R W   +   L  +GL RS  D C+ +  ++     +++A+ VDD  IAG    V  FK  IS+RF + DLG +  +LGIEV+RDR+  T+S+ Q  YI  ++ RF
Sbjct: 1009 VFRIKRNANGKIESYKARLVAQGFSQIPGIDFNDTFAPVAKLASIRIILALAARHDWDVHQMDVKGAYLNADLEEEIFMKQPPGQAKRGKE-HWVCLLRHAIYGLKQSGRQWFKKMCAALDEMGLSRSLVDHCVFYLDEDDDSVTLIIALSVDDTTIAGTNNAVLWFKTEISKRFEMTDLGEMHWILGIEVRRDRAARTLSLSQRAYIDGLMARF 1222          
BLAST of mRNA_H-paniculata_contig3399.9074.1 vs. uniprot
Match: A0A060S5X4_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060S5X4_PYCCI)

HSP 1 Score: 157 bits (398), Expect = 3.720e-39
Identity = 86/216 (39.81%), Postives = 135/216 (62.50%), Query Frame = 1
Query:    1 IFEHKLKEDGSVVRYKARVVAQGFSQMEGKGFFGTSAPAARMSTLRTVFSLVAKHDFELEGMGVDAAHLNALVE*ELFVKLPPEFSPFFRDIPFVRC-LRKSLYGLRQSNRSWNNTVGDFLVGIGLQRSTTDPCLCFSLDEGGETDILVAVYVDDLIIAGRREKVDEFKHNISRRFRVKDLGSLSRVLGIEVQRDRSNGTISIPQDDYIREVLKRF 645
            +F  K   DGS+ ++KAR+VAQG++QM G  F  T AP  ++S++ T+ +L A++D+ELE M V +A+LN  ++ E++++ PP  +P    +  + C L+K+LYGL+Q+   W  T+ + +  +G     +D  + +     G++ ++VA  VDDL IAG R+ V +FK  IS RF + DLG++  +LGIEVQRDR    I+I Q  YI  V  RF
Sbjct:  347 VFHIKRDADGSITQFKARLVAQGYTQMPGVDFNETFAPVTKLSSICTILALTARYDWELEQMDVKSAYLNGRLDEEIYMRQPPGSAP--AGLKHLVCHLKKTLYGLKQAGHGWYKTLANGMAEMGFTCCASDHAVWYK--RAGDSIVIVASSVDDLTIAGTRDFVMDFKSAISARFEMSDLGAMRWILGIEVQRDRQARMIAISQRTYIDTVAVRF 558          
BLAST of mRNA_H-paniculata_contig3399.9074.1 vs. uniprot
Match: H3H9D6_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H9D6_PHYRM)

HSP 1 Score: 155 bits (391), Expect = 3.450e-38
Identity = 80/217 (36.87%), Postives = 135/217 (62.21%), Query Frame = 1
Query:    1 IFEHKLKEDGSVVRYKARVVAQGFSQMEGKGFFGTSAPAARMSTLRTVFSLVAKHDFELEGMGVDAAHLNALVE*ELFVKLPPEFSPFFRDIPFVRC-LRKSLYGLRQSNRSWNNTVGDFLVGIGLQRSTTDPCLCFSLDEGGETDILVAVYVDDLIIAGRREKV-DEFKHNISRRFRVKDLGSLSRVLGIEVQRDRSNGTISIPQDDYIREVLKRF 645
            +F  K  + G + R+KAR+VA+GFSQ  G  +  T AP A+ +++R V SL AK+  +L  M V  A LN +++ ++++  P  +     D P   C L++SLYGL+QS R WN T+ DF++ +G ++  +D C+    D  G+  I VA+YVDDL++A   +++ +  KH +S+RF + DLG L   LG+E++ DR +G +++ Q  +++ +L +F
Sbjct:  452 VFRVKENQAGEIERFKARLVAKGFSQKYGIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGYVD--EDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDMIFVALYVDDLVLASSNDELLESTKHALSKRFEMTDLGELEYFLGMEIKNDRDSGKVTVRQTKFLQSILTKF 664          
BLAST of mRNA_H-paniculata_contig3399.9074.1 vs. uniprot
Match: H3H7U0_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H7U0_PHYRM)

HSP 1 Score: 152 bits (383), Expect = 3.500e-38
Identity = 80/217 (36.87%), Postives = 135/217 (62.21%), Query Frame = 1
Query:    1 IFEHKLKEDGSVVRYKARVVAQGFSQMEGKGFFGTSAPAARMSTLRTVFSLVAKHDFELEGMGVDAAHLNALVE*ELFVKLPPEFSPFFRDIPFVRC-LRKSLYGLRQSNRSWNNTVGDFLVGIGLQRSTTDPCLCFSLDEGGETDILVAVYVDDLIIAGRREKV-DEFKHNISRRFRVKDLGSLSRVLGIEVQRDRSNGTISIPQDDYIREVLKRF 645
            +F  K  + G + R+KAR+VA+GFSQ  G  +  T AP A+ +++R V SL AK+  +L  M V  A LN +++ ++++  P  +     D P   C L++SLYGL+QS R WN T+ DF++ +G ++  +D C+    D  G+  I VA+YVDDL++A   +++ +  KH +S+RF + DLG L   LG+E+++D   G +S+ Q  + +++L++F
Sbjct:  210 VFRVKENQAGEIERFKARLVAKGFSQKYGIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGYVD--EDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDMIFVALYVDDLVLASSNDELLESTKHALSKRFEMTDLGELEYFLGMEIEQDVVTGKMSMRQTKFAKDILQKF 422          
BLAST of mRNA_H-paniculata_contig3399.9074.1 vs. uniprot
Match: A0A0C9RAA9_9HYME (POLX_4 protein (Fragment) n=1 Tax=Fopius arisanus TaxID=64838 RepID=A0A0C9RAA9_9HYME)

HSP 1 Score: 154 bits (388), Expect = 6.430e-38
Identity = 82/216 (37.96%), Postives = 133/216 (61.57%), Query Frame = 1
Query:    1 IFEHKLKEDGSVVRYKARVVAQGFSQMEGKGFFGTSAPAARMSTLRTVFSLVAKHDFELEGMGVDAAHLNALVE*ELFVKLPPEFSPFFRDIPFVRCLRKSLYGLRQSNRSWNNTVGDFLVGIGLQRSTTDPCLCFSLDEGGETDILVAVYVDDLIIAGRREKVDE-FKHNISRRFRVKDLGSLSRVLGIEVQRDRSNGTISIPQDDYIREVLKRF 645
            +F+ K   +G++VRYKAR+V +G SQ +G  +  T +P  R ++LR +F++ AKHD  +  +    A LN  ++ E+F+K P  +S    +   V  L KSLYGL+Q+++ WN+ + + L+ +GL RS  D C+ F + E   + + VA+YVDD+++    +K  +  K+ +S + ++KD+GS S VLG+ VQRD     I + Q +YI  VLKRF
Sbjct:  282 VFKTKRNAEGALVRYKARLVVKGCSQKQGVDYSETFSPVVRYNSLRFLFAMAAKHDLSVHQLDAVTAFLNGELQEEVFMKQPEGYSD---NSGRVCRLLKSLYGLKQASKVWNDKLNEVLISLGLIRSEVDQCIYFCVSE--YSMVYVAIYVDDVLVFSNDKKATQRIKNELSSKIKMKDMGSASSVLGMRVQRDEVKKLIKLDQSEYISSVLKRF 492          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3399.9074.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A060S825_PYCCI1.270e-4342.33CCHC-type domain-containing protein n=1 Tax=Pycnop... [more]
A0A2G8RWY5_9APHY3.110e-4141.47Transcription factor n=1 Tax=Ganoderma sinense ZZ0... [more]
H3H934_PHYRM3.930e-4136.87Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3H9Y1_PHYRM1.150e-3937.33CCHC-type domain-containing protein n=1 Tax=Phytop... [more]
H3H8P6_PHYRM2.030e-3935.94Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A401GQU1_9APHY2.200e-3940.00Uncharacterized protein n=3 Tax=Sparassis crispa T... [more]
A0A060S5X4_PYCCI3.720e-3939.81Integrase catalytic domain-containing protein n=1 ... [more]
H3H9D6_PHYRM3.450e-3836.87Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
H3H7U0_PHYRM3.500e-3836.87Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0C9RAA9_9HYME6.430e-3837.96POLX_4 protein (Fragment) n=1 Tax=Fopius arisanus ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3399contigH-paniculata_contig3399:12706..13917 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score73.9
Seed ortholog evalue3.5e-11
Seed eggNOG ortholog4558.Sb0010s005460.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs37YYP@33090,3GQD7@35493,3IKKZ@38820,3M3FD@4447,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPoales
Best eggNOG OGNA|NA|NA
Exons2
Model size1042
Cds size225
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3399.9074.1prot_H-paniculata_contig3399.9074.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3399 13693..13917 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930047.8598-UTR-H-paniculata_contig3399:12705..129181622930047.8598-UTR-H-paniculata_contig3399:12705..12918Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3399 12706..12918 -
1691481125.3167121-UTR-H-paniculata_contig3399:12705..129181691481125.3167121-UTR-H-paniculata_contig3399:12705..12918Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3399 12706..12918 -
1622930047.8762279-UTR-H-paniculata_contig3399:13088..136921622930047.8762279-UTR-H-paniculata_contig3399:13088..13692Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3399 13089..13692 -
1691481125.3296645-UTR-H-paniculata_contig3399:13088..136921691481125.3296645-UTR-H-paniculata_contig3399:13088..13692Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3399 13089..13692 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930047.8917055-CDS-H-paniculata_contig3399:13692..139171622930047.8917055-CDS-H-paniculata_contig3399:13692..13917Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3399 13693..13917 -
1691481125.3453364-CDS-H-paniculata_contig3399:13692..139171691481125.3453364-CDS-H-paniculata_contig3399:13692..13917Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3399 13693..13917 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3399.9074.1

>prot_H-paniculata_contig3399.9074.1 ID=prot_H-paniculata_contig3399.9074.1|Name=mRNA_H-paniculata_contig3399.9074.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=75bp
IFEHKLKEDGSVVRYKARVVAQGFSQMEGKGFFGTSAPAARMSTLRTVFS
LVAKHDFELEGMGVDAAHLNALVE*
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mRNA from alignment at H-paniculata_contig3399:12706..13917-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3399.9074.1 ID=mRNA_H-paniculata_contig3399.9074.1|Name=mRNA_H-paniculata_contig3399.9074.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1212bp|location=Sequence derived from alignment at H-paniculata_contig3399:12706..13917- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATTTTCGAGCACAAACTGAAGGAGGATGGCAGCGTGGTACGCTATAAAGC GCGAGTAGTGGCTCAAGGTTTTTCACAGATGGAGGGTAAAGGTTTTTTTG GAACCAGTGCCCCCGCAGCTCGTATGTCGACATTGCGTACTGTTTTTAGC CTGGTCGCCAAGCATGATTTCGAATTAGAAGGCATGGGCGTAGATGCGGC GCATTTGAACGCCCTGGTAGAATAAGAGTTGTTTGTTAAGCTACCCCCCG AGTTTTCCCCTTTCTTCCGAGACATACCGTTTGTGCGCTGTCTGCGTAAA AGCTTGTATGGCCTCAGGCAGAGCAACCGAAGCTGGAATAACACTGTTGG TGATTTTCTTGTTGGGATAGGACTCCAGCGTTCCACTACCGACCCATGCT TGTGCTTCTCACTTGACGAAGGGGGAGAGACAGACATTCTCGTAGCCGTC TATGTAGACGACCTGATCATCGCTGGACGTCGTGAGAAAGTAGACGAGTT CAAGCATAACATAAGTCGGCGTTTTAGGGTGAAAGACTTGGGCTCCCTCT CGCGCGTGTTGGGAATAGAAGTACAACGTGACCGCTCCAATGGTACCATA TCAATACCCCAAGATGACTACATCCGCGAGGTACTGAAGAGATTTTGGTT TTGACGAGTGTCGAGGCGTGCCCCCCCCTGTAGAGGGAAAAGTTAAGATT TTGGCACTCGAGTCGGCGGACAAGCCCCCCAAACCGGAACCACTTGGGGC TGTAATGTCAGACATAGGCGCAGGAGTACAAGAAAGCAGCAGTGGGAGAA GTGGCAATTCAACTGAATACAGAGGCATGGTAGAGTCACTCATGTACGCC TCGATAAGAACTAGACCTAATATAGATACGCGGTACACCAATCAGCACGT CGTATGGAGGACTCATGCCGGGAAGACTTGCGTAGATGCAAGCGTATTTT TCGTTATCTCAGTACTGTGCCTGACCTCGATATTACGTTCGGCGGTAAGA ATAATGATCACTGTCTGGAAGGATTAGTTGATGCCGATTGGGCGGAGGAT GTCGAGGACCGCAAGTCCACAACAGGATAAAATTTCAACCTGAACGGTGG TGCGATAAGTTGGTGCTCTAGGAAGCAACAGTTAGCCACGTGGTCTAGTA CAGAGGCAGAGTACGTTGCTGCAGGAGAAGCAGGACAGGAGACGGTATAT CTTGGGGATTTA
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Coding sequence (CDS) from alignment at H-paniculata_contig3399:12706..13917-

>mRNA_H-paniculata_contig3399.9074.1 ID=mRNA_H-paniculata_contig3399.9074.1|Name=mRNA_H-paniculata_contig3399.9074.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=450bp|location=Sequence derived from alignment at H-paniculata_contig3399:12706..13917- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATTTTCGAGCACAAACTGAAGGAGGATGGCAGCGTGGTACGCTATAAAGC
GCGAGTAGTGGCTCAAGGTTTTTCACAGATGGAGGGTAAAGGTTTTTTTG
GAACCAGTGCCCCCGCAGCTCGTATGTCGACATTGCGTACTGTTTTTAGC
CTGGTCGCCAAGCATGATTTCGAATTAGAAGGCATGGGCGTAGATGCGGC
GCATTTGAACGCCCTGGTAGAATAAATTTTCGAGCACAAACTGAAGGAGG
ATGGCAGCGTGGTACGCTATAAAGCGCGAGTAGTGGCTCAAGGTTTTTCA
CAGATGGAGGGTAAAGGTTTTTTTGGAACCAGTGCCCCCGCAGCTCGTAT
GTCGACATTGCGTACTGTTTTTAGCCTGGTCGCCAAGCATGATTTCGAAT
TAGAAGGCATGGGCGTAGATGCGGCGCATTTGAACGCCCTGGTAGAATAA
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