|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 748 |
| Cds size | 747 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3397.9070.1 >prot_H-paniculata_contig3397.9070.1 ID=prot_H-paniculata_contig3397.9070.1|Name=mRNA_H-paniculata_contig3397.9070.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=249bp
RYNIFDEAIAEVLNVMEVNFKADFERSMEYRRLNRAVEREAKELSVLRQA
KLVAGTKNAEREAARRPTPYGSTRSSWPTPREHVRGVSELSLDNSDSAGN
AVGLMEEGFSATGGVHPAEGSGTGCDIFEARGTEQGGGSGDTSGRSLARQ
RSPALCNSAPAAPPTSTAARTIWSLSARSRKKPPAKDLNSFSSGQDTAIA
TVHGAATDMPAPMPSPFFTSSPRLRRHPSSTSFTSSKSASSESSNIGGE back to topmRNA from alignment at H-paniculata_contig3397:10269..15288- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig3397.9070.1 ID=mRNA_H-paniculata_contig3397.9070.1|Name=mRNA_H-paniculata_contig3397.9070.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5020bp|location=Sequence derived from alignment at H-paniculata_contig3397:10269..15288- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGTACAACATTTTCGACGAAGCCATTGCCGAGGTGTTGAACGTGATGGA
GGTCAATTTCAAGGCGGATTTCGAGCGTAGCATGGAGTATCGGAGGCTTA
ATAGGGCTGTGGAGAGAGAAGCCAAGGAACTGTCTGTTCTGCGACAGGTG
GGGTTTTGAGGCGCGCGCGGGGGCGGGGGGGAATGAATAGGGGAGAATAA
TTCCCCCCATTCACCCTGTGGGATTTTCATTCCTATGTCAACACACTGGC
GACAGTTCGTAGAGCTATAGCTCTAATCCTCAAGTAATAACTCTACCGTA
CCCATGTTGAGGTTATGCAGCACCTGACCTCGATTTTCAGATATGTGCAT
TCATCAGCAAATTAGATCAATAATGGGCGGGAGAGGATGTTCTATTTTTC
CCCTTGCAACAGAACCTCCTACGTCATGCATAGGTGCCAGCGTGTGACAT
AATAAACACGCCCCTCCCTTTCACCCGCCCTCCTTTCTTTTCCTTGTTTA
GCGCTCTACCAATAGTTTGTCAACTGATTAGGACGGCACGGTTCGAAGCT
GGCAGTGTGCATTGGTTGAACATGAATAACCCAAGTTGTTGTCGCAGCCA
ACCTACGGTCGCATCTTATGGGCGTCAAAACAATTATCGTCGCAAAACCC
GATTGTTGGACGTTTGCTGACGCTTTTGTCCCAGGAAACGCGGCCATCGA
TCCACATCCCTTGTGAGCTGCTCGTTACCTCACTGAGAGGAATCCAAACC
CCACTCTTTCGTTCCACCACGCGTTAATTTAGTTGTCGCAAATGCCCTTT
GCTAAGAAATCGAGCAAGGAAAAAAAGTTAGGCACGTCCTTAATTCAAAT
GTTTTCACACGATTTTTTGAGGCGTTGAAAACAAGCCTCACCTTGGTTTT
TGTGTGATGATACATGGGTGTAGAAAATACCCGGCTTTAATGCACGATAA
CAATCAAGCTTGCGACGTCCGTAAGATGAGGCCTAGACGCCAGCATAATA
TTTCACACATGAAACGACAAACTAGTCGTCTGAAATGACTCATTAAGCGA
TGGTACCCCCTTGAAACCAAAAACCTGGTCCCCCGCAGGTGTCGAGCTGA
ACAAGGGATCGGCTGTAACATACTATATTTTCATGCATGCACACAGTCCG
AAAGCGTTAAATATAACCAGGGTCGCAGAGGCAGGGAGCTTCGTTTTCGA
TGAGGGTAAAGAGGTCTCAATTAGTCGTTTCAGGTAACAAATTAGTCGTT
GTATGTGTGTCATATTTAGCCCAATTACATGAAGGGTGAAGGACAGATTC
AGGTAGACCTGGGCAATGTCCGGCCAGAAACAGGTATAATGTCAATGAAC
TCTATAGCGCCGCCGATATACAGGCACCTGATTGGCAGAGACAGCCTCGT
ATCTGACTGTGGCCGAAATACACTCCAGTGCACCTGGAATTTTCTGCTTT
TCTCTACCGCTTACACCTGGACGTCGGCAGTTACCTGAAACTGGCCAAAG
TTATACCTGAAATCACAACCAATACCTGAAACACTGGGATTATGTGCACC
GGCATCTCCTTCTCCCTCTTCCCTCCCCAAAATTGCCAGTGGCAGCTCGT
ACCATTTGCTCGACTCTTCGTCAACCTGATCTCCAACGCCCATCCACATG
CGGCATGCATCCTGAAGTACTTTGTGGGAAAAATAATGTTCGACGCCACC
AAATAGCCACCTAAATCACACCGAGACAGGCATATACATGCATGTTGGGG
ATCCAAGAATGACATCAGCCCGTTACCCAACCCATCGAACAGTCAAGAAC
ACCACCTCACCGTAGGTCAAGATCATGTGCTGTGTAGCAGAAAAGATTGT
AAAGGGTTGCTAGGCACCATGGCGGAATTCGTGCTGGTTGAGAGAGAGAA
GTCAAAGACTTGGTGACACTCAATCGTTAAAAGCTGACGTAGCGCGTGAG
CTGCTGCACGATGGCAAAAGCGTCAGGTGTCGAAATGGTGATAGCAAACG
GAAACAGATCTCTTGTAGCACTTGTACAACGTAGGTTGTGGATGCAACAA
AGCTGCAGACGGAGGGGGGTGTTTGGAACATCAGCAGCGCCAACAAGGAA
CACGTCAATTGCACAGGTGACAGCACCGCTGCTATTATTGCCAACATCGC
CCCAACGTTAGACGGCTACTCAACATGACGGCACCCGCTCTGAAGCGGAT
GGTCAAAAGTTCAGTGGGCATTTTGCCCTTTCATTAATGAATAAAATAAT
GACTACAACAATTTTTTACTGTCATCGACTTGATTGATTTACACGCAGGC
AAAGCTTGTGGCAGGGACTAAAAATGCCGAGAGAGAAGCAGCTCGTCGAC
CCACGCCTTATGGGAGCACCAGAAGCAGCTGGCCCACGCCCCGGGAACAC
GTTCGAGGTGTTTCCGAGTTGTCGCTGGACAACAGCGACAGCGCTGGCAA
TGCGGTGGGCTTGATGGAGGAGGGGTTCTCGGCGACTGGTGGTGAGTCGT
TCAACGGTTAATGCAAGAAAGAAATATACTTATGCACGAACGTTGCAATA
CTATCAGAGTGTTTACGCGAAACGAAATCCTTTTGCAATTTTTGATTTGG
TCGTATATAGCTAACAATAGTGAGGTCCTCGTCGCGGACTTCAGTCCACC
TGCATCAACGTCTCGATGTAAATCGAATTCCTTGTCATAACCAATCATCG
TATCTCACGAAACAGACGAATTGTGAAATGGAAATCCTTTCATCACGAGA
TGTTGGTGTGGGTGAGCTGGTGTACGGAAGAGATTTGCGATGAGCAGGTC
ACTGTTGTTAGCTATATACGATTAAATAAAAAATTGCATCAGGATTTCGT
TTTGAGCAAACGCCTTATTTAGTACCAAGGACATTCGTTGTGTTGACGTC
TTTTGCTTTTCAGCTGATTGTATTGATCTCGTTTCGCTAGCTAATTGGGC
TGACATTTTATTGCCGCTATGCTTAACAGACGGTACCCTGATGGACGGTG
TGGCCTTGGCGCGTGTGTCTTTATCGTTGTCTGGTTTCCCTTGGTTTACT
GTTTCTGTTTGTGTTCAATGTGTTTGTTTACCTGTTTCGCTACGTTCCCC
CCTGGTTTTGTTTTTCCTGTTCTAGGTCTATGTTCGCTTGTATCACTCAT
TTTTCTATGACGTACCATTGCCGTTCCACGGAATCGCCATTTACCCTGCG
CCCACGGATCTGAGGAATCGGACTAACGTGTGAATAACAATAATAACAAT
ACTACTACTACTACTTCTTATGATGATGATGATGATGATGATGATGATGA
TGATGACGATAGTAATAATACTAATAATAGCAATAAAGATAATGTTGATT
GTTATAAATATACTTGTAGACTTGTATTGCAACGTTCCTAAACTACGTTT
TCGAGGCAAGAATCTGAAGGCCGCAAGAAAGAAGCTAATACCTCACTCCC
CCCACTCTATCGTTGAACGATCCAGGTGTTCACCCTGCTGAAGGTTCTGG
GACTGGGTGTGATATTTTTGAGGCACGCGGAACAGAGCAAGGTGGCGGCA
GCGGTGACACCAGCGGCAGGAGTCTTGCGGTATGTGCAGATAGCGAATTT
TGTCCTCTTCTGCCTGCTACTTCTTGTTTGGTTTTTCTAGTGTAGTTTCA
ATGGTTTTTTTACTAGGGCAGTGGACAGGAAGAGGTACTCCTTGATACCC
TTCGGTTTGTTCAGGGCAGCGCGGCGCACAGTCCGTCCCTGCTGCTGTTG
TTTACTCGAGTGCCTATTGCCAATGCGGATAGGTCATATGTACGCCCTGC
CAACGCACACAGACACGCGCTTCGCCATCGAGGGTACGCCACACGTACCT
TGTGTCAATGCACAGTACACTAGACTTGATTAGGTGGGATCGACGGGTTA
GCGTTAGCGTTAGTGTTAGAATTGACGAGTGAGGAGGGTGTTGCCCTGCG
GTGCTGTCGACAGGGGTTTTCGTTGTGCATGGTTTCTCACCTCGGATGGA
CGTCAATGACGGTCCAGGTCATGTTTTTTGTTTACGATTCTAGACCTATT
TACTTACATAAAATCTCCACGATTTTTTCACTTCCGGACAAAATGGATTC
TGTCTTTTTTCCTCCTATTTTTATAGCCCTCTAAGAGGAAGAGCTTAGAG
GAAAACTTCGCGCAACACTTACCCCGATAAATCGGATTCGCATGCCAGCT
ACCGGAAGGCCTGGCTAACCCGCTTCGCAGTGGACGTGTGGGATAAGCAC
CCCGAGTGTTCGCATGGGTGTGCAACTCGCACCTGCTAAGTAAAACCCCT
TGTTACGGAGGCGGGGTGCGGGAGTAAAAGTCAGCCGTTCCACATGATGT
TTTGTCCTAATCTCGTCGAACTTCAATTACGTACATGTATGTTTGATGCT
GAGGTCACGTATGCTGCTTTCACAGGTAGGCTGTAGGCTCAGTCAGTGCA
TGAGAATCCTTATCCGATCGGGCTTCGGTTCTTCAGCTGTCCATTTCTTT
CTTCTTTCTTGCTCCTTTCCTACCCTCGTCTTTCTTTCTTCAGCGGTAGA
TTTTAATGTATACTTGAAATAGATCTACATATGAAATTCATGAAGTTGAA
AGTGGTCACTTGAGACAGAAAAAAAAACTCTCGCATATTTATCCTTCTTG
CTCCTCTTATCTTTCTTCTTTTCTTCTTTTCTACCCTCGTTTCGTTCTCC
TTTCTTTTTTTTTCAGCGGCAGCGGTCGCCAGCCCTCTGTAACTCCGCCC
CAGCCGCTCCACCCACCTCAACAGCCGCGAGAACAATCTGGTCCTTGTCC
GCTCGCTCCAGGAAAAAACCACCGGCAAAGGACTTGAACAGTTTTAGCAG
CGGACAAGATACGGCGATCGCCACCGTCCATGGCGCTGCCACAGACATGC
CCGCTCCCATGCCATCTCCATTTTTTACATCATCGCCACGGCTACGCCGA
CATCCGTCATCGACCTCGTTCACATCTAGCAAGAGCGCGAGCAGCGAGAG
CAGTAATATTGGTGGGGAAG back to topCoding sequence (CDS) from alignment at H-paniculata_contig3397:10269..15288- >mRNA_H-paniculata_contig3397.9070.1 ID=mRNA_H-paniculata_contig3397.9070.1|Name=mRNA_H-paniculata_contig3397.9070.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1494bp|location=Sequence derived from alignment at H-paniculata_contig3397:10269..15288- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGTACAACATTTTCGACGAAGCCATTGCCGAGGTGTTGAACGTGATGGA
GGTCAATTTCAAGGCGGATTTCGAGCGTAGCATGGAGTATCGGAGGCTTA
ATAGGGCTGTGGAGAGAGAAGCCAAGGAACTGTCTGTTCTGCGACAGAGG
TACAACATTTTCGACGAAGCCATTGCCGAGGTGTTGAACGTGATGGAGGT
CAATTTCAAGGCGGATTTCGAGCGTAGCATGGAGTATCGGAGGCTTAATA
GGGCTGTGGAGAGAGAAGCCAAGGAACTGTCTGTTCTGCGACAGGCAAAG
CTTGTGGCAGGGACTAAAAATGCCGAGAGAGAAGCAGCTCGTCGACCCAC
GCCTTATGGGAGCACCAGAAGCAGCTGGCCCACGCCCCGGGAACACGTTC
GAGGTGTTTCCGAGTTGTCGCTGGACAACAGCGACAGCGCTGGCAATGCG
GTGGGCTTGATGGAGGAGGGGTTCTCGGCGACTGGTGGCAAAGCTTGTGG
CAGGGACTAAAAATGCCGAGAGAGAAGCAGCTCGTCGACCCACGCCTTAT
GGGAGCACCAGAAGCAGCTGGCCCACGCCCCGGGAACACGTTCGAGGTGT
TTCCGAGTTGTCGCTGGACAACAGCGACAGCGCTGGCAATGCGGTGGGCT
TGATGGAGGAGGGGTTCTCGGCGACTGGTGGTGTTCACCCTGCTGAAGGT
TCTGGGACTGGGTGTGATATTTTTGAGGCACGCGGAACAGAGCAAGGTGG
CGGCAGCGGTGACACCAGCGGCAGGAGTCTTGCGGTGTTCACCCTGCTGA
AGGTTCTGGGACTGGGTGTGATATTTTTGAGGCACGCGGAACAGAGCAAG
GTGGCGGCAGCGGTGACACCAGCGGCAGGAGTCTTGCGCGGCAGCGGTCG
CCAGCCCTCTGTAACTCCGCCCCAGCCGCTCCACCCACCTCAACAGCCGC
GAGAACAATCTGGTCCTTGTCCGCTCGCTCCAGGAAAAAACCACCGGCAA
AGGACTTGAACAGTTTTAGCAGCGGACAAGATACGGCGATCGCCACCGTC
CATGGCGCTGCCACAGACATGCCCGCTCCCATGCCATCTCCATTTTTTAC
ATCATCGCCACGGCTACGCCGACATCCGTCATCGACCTCGTTCACATCTA
GCAAGAGCGCGAGCAGCGAGAGCAGTAATATTGGTGGGGAACGGCAGCGG
TCGCCAGCCCTCTGTAACTCCGCCCCAGCCGCTCCACCCACCTCAACAGC
CGCGAGAACAATCTGGTCCTTGTCCGCTCGCTCCAGGAAAAAACCACCGG
CAAAGGACTTGAACAGTTTTAGCAGCGGACAAGATACGGCGATCGCCACC
GTCCATGGCGCTGCCACAGACATGCCCGCTCCCATGCCATCTCCATTTTT
TACATCATCGCCACGGCTACGCCGACATCCGTCATCGACCTCGTTCACAT
CTAGCAAGAGCGCGAGCAGCGAGAGCAGTAATATTGGTGGGGAA back to top
|