mRNA_H-paniculata_contig33930.9061.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig33930.9061.1 vs. uniprot
Match: D8LRZ8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRZ8_ECTSI) HSP 1 Score: 129 bits (325), Expect = 4.690e-30 Identity = 72/129 (55.81%), Postives = 87/129 (67.44%), Query Frame = 1
Query: 1 RAVIQNCMEKLLNLVCEGATKEQWAEWLRVPLEHAAAAGDTALVSDLLEAGANGKAGWKGCLDRSLLCAAVQGGERQVVSALLTAGAQPDVNVCSGEKQRSALHHASSGGHDTIAKLLLVAGADVGCVD 387
R + Q ++ LV AT +QW EWLRVPLEHAAA G+ LV+ LLEAGA+G AGWKGC R+L+ AA GG VVSALL AGAQPDVNV S +RS+L+ A+ GH A+ L+ AGADV D
Sbjct: 7 RRLFQGMGSEIWKLVSHSATPQQWKEWLRVPLEHAAARGNLNLVNSLLEAGADGSAGWKGCRGRTLIDAAALGGSEPVVSALLRAGAQPDVNVVSVSSKRSSLYTATVCGHKDAARRLITAGADVNFED 135
BLAST of mRNA_H-paniculata_contig33930.9061.1 vs. uniprot
Match: D8LDP2_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDP2_ECTSI) HSP 1 Score: 129 bits (325), Expect = 4.870e-30 Identity = 66/132 (50.00%), Postives = 89/132 (67.42%), Query Frame = 1
Query: 1 RAVIQNCMEKLLNLVCEGATKEQWAEWLRVPLEHAAAAGDTALVSDLLEAGANGKAGWKGCLDRSLLCAAVQGGERQVVSALLTAGAQPDVNVCSGEKQRSALHHASSGGHDTIAKLLLVAGADVGCVDSDK 396
R ++ ++L LV E AT QW+EWLR PLEHA A GD L LL+AGANG +GW+GC DR+LL AA +GG +VVS LL G +++V SG++ R+ALH A GGH A+ L+VAG+D +D++K
Sbjct: 7 RTALKGLEKRLFKLVSEKATSAQWSEWLRAPLEHAVAEGDKDLALTLLKAGANGGSGWEGCNDRTLLQAAAEGGNEEVVSTLLGKGGLEEIDVASGDQDRTALHRALIGGHTGAARALMVAGSDTSLLDTEK 138
BLAST of mRNA_H-paniculata_contig33930.9061.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE) HSP 1 Score: 129 bits (324), Expect = 1.700e-29 Identity = 71/129 (55.04%), Postives = 87/129 (67.44%), Query Frame = 1
Query: 1 RAVIQNCMEKLLNLVCEGATKEQWAEWLRVPLEHAAAAGDTALVSDLLEAGANGKAGWKGCLDRSLLCAAVQGGERQVVSALLTAGAQPDVNVCSGEKQRSALHHASSGGHDTIAKLLLVAGADVGCVD 387
RA+++ ++ L+ GAT EQWAEWLR PLEHAAA G+ LV LL AGANG AGW+GC R++L AA GG VV+ LL +G DVNV S +RSALH AS GH+ AK L++AGADV VD
Sbjct: 7 RALLEGAELEIFKLLYFGATPEQWAEWLRAPLEHAAARGNLGLVERLLNAGANGGAGWRGCRGRTMLDAAALGGNPDVVATLLASGCASDVNVVSLSSRRSALHVASVCGHEAAAKKLIIAGADVNRVD 135
BLAST of mRNA_H-paniculata_contig33930.9061.1 vs. uniprot
Match: D7FXA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA8_ECTSI) HSP 1 Score: 127 bits (319), Expect = 5.280e-29 Identity = 70/125 (56.00%), Postives = 88/125 (70.40%), Query Frame = 1
Query: 28 KLLNLVCEGATKEQWAEWLRVPLEHAAAAGDTALVSDLLEAGANGKAGWKGCLDRSLLCAAVQGGERQVVSALLTAGAQPDVNVCSGEKQRSALHHASSGGHDTIAKLLLVAGADVGCVD-SDKS 399
++ +V EGAT EQWA WLR PLEHAAA+G+ LV LL+AG +GKAGW+GC RSLL AA GG V+SALL AG PDVNV + RSAL+ + G H+ A+ L++AGADV VD +DK+
Sbjct: 14 EIFKIVSEGATPEQWARWLRAPLEHAAASGNLNLVDRLLKAGVDGKAGWRGCRGRSLLDAAALGGNAGVMSALLQAGCGPDVNVVASSTGRSALYQSVLGKHEAAARKLILAGADVNFVDRADKA 138
BLAST of mRNA_H-paniculata_contig33930.9061.1 vs. uniprot
Match: D8LRS0_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRS0_ECTSI) HSP 1 Score: 126 bits (316), Expect = 8.280e-29 Identity = 72/130 (55.38%), Postives = 87/130 (66.92%), Query Frame = 1
Query: 1 RAVIQNCMEKLLNLVCEGATKEQWAEWLRVPLEHAAAAGDTALVSDLLEAGANGKAGWKGCLDRSLLCAAVQGGERQVVSALLTAGAQPDVNVCSGEKQRSALHHASSGGH-------DTIAKLLLVAGA 369
R ++Q ++ LV GAT +QW EWLRVPLEHAAA G+ LV+ LLEAGA+G AGW+GCLDR+L+ AA GG VVSALL AGAQPDVN S +RSAL+ A+ GH D I LL+ GA
Sbjct: 7 RRLLQGMESEIWKLVSYGATPQQWKEWLRVPLEHAAARGNLNLVNSLLEAGADGSAGWRGCLDRTLIDAAALGGSEPVVSALLRAGAQPDVNTVSISSKRSALYTATVCGHEHAARGLDRIVSALLLRGA 136
BLAST of mRNA_H-paniculata_contig33930.9061.1 vs. uniprot
Match: D8LKW6_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKW6_ECTSI) HSP 1 Score: 126 bits (316), Expect = 1.350e-28 Identity = 67/125 (53.60%), Postives = 88/125 (70.40%), Query Frame = 1
Query: 16 NCMEKLL-NLVCEGATKEQWAEWLRVPLEHAAAAGDTALVSDLLEAGANGKAGWKGCLDRSLLCAAVQGGERQVVSALLTAGAQPDVNVCSGEKQRSALHHASSGGHDTIAKLLLVAGADVGCVD 387
N +EK+L LV E A QW+EWLR PLEHA A GD L LL+AGA+G AGW+GC DR+LL AA +GG +VV LL G +++V SG+ +R+ALH A +GGH A++L++AGADVG +D
Sbjct: 11 NGLEKMLFKLVSEKAASAQWSEWLRAPLEHAVAEGDNDLALALLKAGADGSAGWEGCGDRTLLQAAAEGGNEEVVLTLLDNGGVEELDVVSGDNERTALHRALAGGHTEAARVLMLAGADVGLLD 135
BLAST of mRNA_H-paniculata_contig33930.9061.1 vs. uniprot
Match: A0A6H5K513_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K513_9PHAE) HSP 1 Score: 123 bits (308), Expect = 1.740e-27 Identity = 66/129 (51.16%), Postives = 90/129 (69.77%), Query Frame = 1
Query: 1 RAVIQNCMEKLLNLVCEGATKEQWAEWLRVPLEHAAAAGDTALVSDLLEAGANGKAGWKGCLDRSLLCAAVQGGERQVVSALLTAGAQPDVNVCSGEKQRSALHHASSGGHDTIAKLLLVAGADVGCVD 387
R++++ ++ LV +GAT EQWAEWLRVPLEHAAA+G+ LV+ LL+AGA+G+AGW+GC DR+LL AA+ GG V+SALL AG PD NV + RS L+ + +A+ L++AGADV D
Sbjct: 7 RSLLKGQEVEIFKLVSKGATPEQWAEWLRVPLEHAAASGNLDLVNKLLKAGADGEAGWRGCGDRTLLDAALSGGNAGVMSALLQAGCGPDANVLAPSTGRSVLYQSILSNQKAVARELILAGADVNIKD 135
BLAST of mRNA_H-paniculata_contig33930.9061.1 vs. uniprot
Match: D8LBP9_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBP9_ECTSI) HSP 1 Score: 123 bits (308), Expect = 1.970e-27 Identity = 68/129 (52.71%), Postives = 83/129 (64.34%), Query Frame = 1
Query: 1 RAVIQNCMEKLLNLVCEGATKEQWAEWLRVPLEHAAAAGDTALVSDLLEAGANGKAGWKGCLDRSLLCAAVQGGERQVVSALLTAGAQPDVNVCSGEKQRSALHHASSGGHDTIAKLLLVAGADVGCVD 387
R V++ + L+ GAT EQW EWLR PLEHAAA G+ LV LL AGA+G AGW GC R+LL AA GG VV+ LL AG PDVNV S +RSALH ++ GH+ A+ L++AGAD VD
Sbjct: 5 RPVLEGAEVGIFTLLSYGATPEQWREWLRAPLEHAAARGEFVLVEKLLNAGADGGAGWSGCRGRTLLDAAALGGNPDVVTTLLRAGCLPDVNVVSVSSRRSALHLSAVCGHEAAARKLILAGADANRVD 133
BLAST of mRNA_H-paniculata_contig33930.9061.1 vs. uniprot
Match: D8LS36_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS36_ECTSI) HSP 1 Score: 122 bits (306), Expect = 2.650e-27 Identity = 68/125 (54.40%), Postives = 85/125 (68.00%), Query Frame = 1
Query: 1 RAVIQNCMEKLLNLVCEGATKEQWAEWLRVPLEHAAAAGDTALVSDLLEAGANGKAGWKGCLDRSLLCAAVQGGERQVVSALLTAGAQPDVNVCSGEKQRSALHHASSGGHDTIAKLLLVAGADV 375
R ++Q ++ LV AT +QW EWLR+PLEHAAA G+ LVS LL AGA+G AGW+GC R+L+ AA GG VVS LL AGAQ DVNV S +RSAL+ A+ GH+ A+ L+ AGADV
Sbjct: 7 RRLLQGMESEIWKLVSYSATPQQWKEWLRMPLEHAAARGNLNLVSSLLGAGADGSAGWRGCRGRTLIDAAALGGSEPVVSTLLRAGAQWDVNVVSVSSKRSALYTATMCGHEDAARRLVAAGADV 131
BLAST of mRNA_H-paniculata_contig33930.9061.1 vs. uniprot
Match: A0A6H5JW91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW91_9PHAE) HSP 1 Score: 115 bits (288), Expect = 6.240e-27 Identity = 66/129 (51.16%), Postives = 81/129 (62.79%), Query Frame = 1
Query: 1 RAVIQNCMEKLLNLVCEGATKEQWAEWLRVPLEHAAAAGDTALVSDLLEAGANGKAGWKGCLDRSLLCAAVQGGERQVVSALLTAGAQPDVNVCSGEKQRSALHHASSGGHDTIAKLLLVAGADVGCVD 387
R +++ ++ LV AT EQW EWL+VPLE AAA G+ L LLEAGA G AGW+GC DRSL+ AA GG VVS L AGA+PDV V S + SAL GH+ +A+ L+ AGADV VD
Sbjct: 50 RVLLEGLEIEIFKLVSYSATPEQWKEWLQVPLERAAALGNRDLFYKLLEAGAYGSAGWRGCRDRSLIDAAAVGGNVDVVSGFLEAGAEPDVQVVSWSSKTSALCTPVRFGHEDVARRLVTAGADVNFVD 178 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig33930.9061.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig33930.9061.1 >prot_H-paniculata_contig33930.9061.1 ID=prot_H-paniculata_contig33930.9061.1|Name=mRNA_H-paniculata_contig33930.9061.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=366bp MEKLLNLVCEGATKEQWAEWLRVPLEHAAAAGDTALVSDLLEAGANGKAGback to top mRNA from alignment at H-paniculata_contig33930:1..1119- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig33930.9061.1 ID=mRNA_H-paniculata_contig33930.9061.1|Name=mRNA_H-paniculata_contig33930.9061.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1119bp|location=Sequence derived from alignment at H-paniculata_contig33930:1..1119- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig33930:1..1119- >mRNA_H-paniculata_contig33930.9061.1 ID=mRNA_H-paniculata_contig33930.9061.1|Name=mRNA_H-paniculata_contig33930.9061.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2196bp|location=Sequence derived from alignment at H-paniculata_contig33930:1..1119- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |