mRNA_H-paniculata_contig3371.9009.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig3371.9009.1 vs. uniprot
Match: A0A6H5JKL2_9PHAE (CBS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKL2_9PHAE) HSP 1 Score: 496 bits (1277), Expect = 1.010e-163 Identity = 292/450 (64.89%), Postives = 338/450 (75.11%), Query Frame = 1
Query: 436 SVIHLGKLRIPESRRIHHISRRVAGDAGQAFATSDEPLLQVVDDDITLPLGIDGEPGVEDDKNKEDRREGERKIVVDAERITMTHSFVGEPSLIPYGMGQDQTQRGVVQIPLHYSVRQTVDFVRAVFTRDR---QEYPSSLEASSLGGRGKGSQEGGLLQADTRTPAALTDRIYVTKDGKLEGYITMTSLLTNDPTTPVLSLVRELEELLREGDSWEQAAHRLRHANVLAAPVVDSEGVLVAVLNPSDLLNEMEIEATDDIMRQSGSGGGESYFGTPLVRLVASRVGWLVGLLGLQSFSSLILQSYQSVIERNIVIALFLTMLTGTAGNAGNQSSAIVIRGLATGEIHEGNRFKVIWREARAAVASAVVLSIASFVRVSLTPGATTVATLAVAIAMGTTVVGAVMFGTIAPIVLDGMGVDPVNFASPALATLTDVSGVFILCCVAKLMLG 1776
SVIHLG+LRIP+SRR+ ++ + + Q A + + G +G G + EG + D + GE S+IP+G+G+ + GVVQIPLH+SV +TVDF+R + T DR +E S L GG G+ + G+ ++L+ RIYVT++G L+GYITM LLT+ TPV L+RELEE+L EGDSWE AHRLR ANVLAAPVVDS+GVLVAVLNPSDLL EMEIEATDDIMRQSGSGGGESYFGTPL LVASRVGWLV LL LQSFSS+ILQS+Q+VIE+NIVIALFLTMLTGTAGNAGNQSSAIVIRGLAT EIH+GNR++VIWREARA VASA VLS+ASF+RV LTPGATTVATLAV+IAMG TVVGAVMFGTIAPIVL GMGVDPVNFASPALATLTDVSGVFILC VAKLMLG
Sbjct: 117 SVIHLGRLRIPQSRRVD-LTTLSSEASAQTSAV------------VGVQAGQEGHAGGAPSEGARSEGEGGGQ---DDRSDGRPPASAGEASVIPFGIGEGRYGGGVVQIPLHFSVGETVDFIRTIATVDRDYRRESSSPLVHLPEGGGGEAAAAEGM-------GSSLSSRIYVTENGTLKGYITMAVLLTHQSDTPVADLLRELEEMLHEGDSWEDTAHRLRQANVLAAPVVDSDGVLVAVLNPSDLLQEMEIEATDDIMRQSGSGGGESYFGTPLPSLVASRVGWLVSLLCLQSFSSVILQSFQNVIEKNIVIALFLTMLTGTAGNAGNQSSAIVIRGLATEEIHQGNRWRVIWREARAGVASACVLSVASFIRVLLTPGATTVATLAVSIAMGATVVGAVMFGTIAPIVLHGMGVDPVNFASPALATLTDVSGVFILCSVAKLMLG 543
BLAST of mRNA_H-paniculata_contig3371.9009.1 vs. uniprot
Match: D7FSM0_ECTSI (Divalent cation transporter, carboxyterminus n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSM0_ECTSI) HSP 1 Score: 490 bits (1262), Expect = 1.880e-163 Identity = 274/362 (75.69%), Postives = 306/362 (84.53%), Query Frame = 1
Query: 700 GEPSLIPYGMGQDQTQRGVVQIPLHYSVRQTVDFVRAVFTRDR---QEYPSSLEASSLGGRGKGSQEGGLLQADTRTPAALTDRIYVTKDGKLEGYITMTSLLTNDPTTPVLSLVRELEELLREGDSWEQAAHRLRHANVLAAPVVDSEGVLVAVLNPSDLLNEMEIEATDDIMRQSGSGGGESYFGTPLVRLVASRVGWLVGLLGLQSFSSLILQSYQSVIERNIVIALFLTMLTGTAGNAGNQSSAIVIRGLATGEIHEGNRFKVIWREARAAVASAVVLSIASFVRVSLTPGATTVATLAVAIAMGTTVVGAVMFGTIAPIVLDGMGVDPVNFASPALATLTDVSGVFILCCVAKLMLG 1776
GE S+IP+G+G+ + GVVQIPLH+SV +TVDF+R + T DR +E S L GG G+ + G+ ++L+ RIYVT++G L+GYITM LLT+ TPV L+RELEE+L EGDSWE AAHRLR ANVLAAPVVDS+GVLVAVLNPSDLL EMEIEATDDIMRQSGSGGGESYFGTPL LVASRVGWLV LL LQSFSSLILQS+Q+VIE+NIVIALFLTMLTGTAGNAGNQSSAIVIRGLAT EIH+GNR++VIWREARA VASA VLS+ASFVRV LTPGATTVATLAV++AMGTTVVGAVMFGTIAPIVL GMGVDPVNFASPALATLTDVSGVFILC VAKLMLG
Sbjct: 56 GEASVIPFGVGEGRYGGGVVQIPLHFSVGETVDFIRTIATVDRDYRRELSSPLVHLPEGGGGEAAAADGM-------GSSLSSRIYVTENGTLKGYITMAVLLTHQSETPVAELLRELEEMLHEGDSWEDAAHRLRQANVLAAPVVDSDGVLVAVLNPSDLLQEMEIEATDDIMRQSGSGGGESYFGTPLPSLVASRVGWLVSLLCLQSFSSLILQSFQNVIEKNIVIALFLTMLTGTAGNAGNQSSAIVIRGLATEEIHQGNRWRVIWREARAGVASACVLSVASFVRVLLTPGATTVATLAVSVAMGTTVVGAVMFGTIAPIVLHGMGVDPVNFASPALATLTDVSGVFILCSVAKLMLG 410
BLAST of mRNA_H-paniculata_contig3371.9009.1 vs. uniprot
Match: A0A835YYN6_9STRA (CBS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYN6_9STRA) HSP 1 Score: 341 bits (875), Expect = 6.990e-108 Identity = 183/263 (69.58%), Postives = 221/263 (84.03%), Query Frame = 1
Query: 985 MTSLLTNDPTTPVLSLVRELEELLREGDSWEQAAHRLRHANVLAAPVVDSEGVLVAVLNPSDLLNEMEIEATDDIMRQSGSGGGESYFGTPLVRLVASRVGWLVGLLGLQSFSSLILQSYQSVIERNIVIALFLTMLTGTAGNAGNQSSAIVIRGLATGEIHEGNRFKVIWREARAAVASAVVLSIASFVRVSLTPGATTVATLAVAIAMGTTVVGAVMFGTIAPIVLDGMGVDPVNFASPALATLTDVSGVFILCCVAKLML 1773
M SLLTN P T V +V + EE+L+EGD+WE+AA RLR A + +APVVD +G LVA+LNP+DLL EMEIEATDDI R SGSGGGE+YFGTPL++LV R GWLV LL LQS SS+IL +QSVIER+IVIALFLTMLTGTAGNAGNQSSA+VIRGLATGEI+ N+ + +WREA+AA+ +AV+LS ASF RV +TPG+T +A++AV++AMG TVVGAV+FGT P++LD GVDPVNFASPALATLTDVSGV ILC VA ++L
Sbjct: 1 MASLLTNTPDTLVADVVIKSEEVLKEGDAWEEAAQRLRKAGISSAPVVDEDGFLVAILNPTDLLMEMEIEATDDISRFSGSGGGETYFGTPLMKLVLRRCGWLVSLLMLQSLSSVILTHFQSVIERHIVIALFLTMLTGTAGNAGNQSSAMVIRGLATGEINSANKMRCLWREAKAALIAAVILSAASFARVWMTPGSTWLASVAVSVAMGATVVGAVLFGTATPLLLDRFGVDPVNFASPALATLTDVSGVLILCTVASMLL 263
BLAST of mRNA_H-paniculata_contig3371.9009.1 vs. uniprot
Match: A0A4D9CYH9_9STRA (CBS domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CYH9_9STRA) HSP 1 Score: 296 bits (758), Expect = 2.560e-86 Identity = 168/345 (48.70%), Postives = 237/345 (68.70%), Query Frame = 1
Query: 745 QRGVVQIPLHYSVRQTVDFVRAVFTRDRQEYPSSLEASSLG-GRGKGSQEGGLLQADTRTPAALTDRIYVTKDGKLEGYITMTSLLTNDPTTPVLSLVRELEELLREGDSWEQAAHRLRHANVLAAPVVDSEGVLVAVLNPSDLLNEMEIEATDDIMRQSGSGGGESYFGTPLVRLVASRVGWLVGLLGLQSFSSLILQSYQSVIERNIVIALFLTMLTGTAGNAGNQSSAIVIRGLATGEIHEGNRFKVIWREARAAVASAVVLSIASFVRVSLTPGATTVATLAVAIAMGTTVVGAVMFGTIAPIVLDGMGVDPVNFASPALATLTDVSGVFILCCVAKLMLG 1776
+ G+V +P + V VDF+ + S LE + G G G+ ++ GG P +RI+VT G+L GY+T LL D P+LS+VR E ++R+ D ++ A +R + APVV + V+V ++ PSD+L EME+EATDD+ R SGSG ES+FGTP+++LV +R WLV LL LQS SS+IL + ++IER++VIALFLTMLTGTAGNAGNQSSA+VIRG+ATGEI+ N +K + RE +AA+ + +L++A+F+RV +TPG+T ++T+AV +A+ TVVGA FGT+AP+V+D +GVDP N ASPAL+TL DV GV +LC ++ MLG
Sbjct: 274 EEGLV-VPASFLVGDVVDFITRM---------SKLERYNGGPGDGREAEGGG------GGPCRSLERIFVTDCGRLVGYVTSMDLLVQDRVAPLLSIVRSCEVVVRDSDEYDDAIGAMRAKRLTYAPVVTEDEVVVGIITPSDMLKEMEMEATDDVSRYSGSGSTESFFGTPVLQLVTARASWLVSLLMLQSLSSIILTHFSALIERHLVIALFLTMLTGTAGNAGNQSSAMVIRGIATGEINRKNGWKAVVREVKAALLMSALLAVAAFLRVYITPGSTVMSTVAVTLALSVTVVGACAFGTVAPLVMDRLGVDPANCASPALSTLVDVGGVLVLCALSSAMLG 602
BLAST of mRNA_H-paniculata_contig3371.9009.1 vs. uniprot
Match: A0A0G4EE00_VITBC (CBS domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EE00_VITBC) HSP 1 Score: 287 bits (735), Expect = 7.880e-85 Identity = 175/378 (46.30%), Postives = 243/378 (64.29%), Query Frame = 1
Query: 700 GEPSLIPYGMGQDQTQRGVVQIPLHYSVRQT----------VDFVRAVFTRDRQEYPSSLEASSLGGRGKGSQEGGLLQADTRTPAALTDRIYVTKDGKLEGYITMTSLLTNDPTTPVLSLVRELEELLREGDSWEQAAHRLRHANVLAAPVVDSEGVLVAVLNPSDLLNEMEIEATDDIMRQSG-------SGGGESYFGTPLVRLVASRVGWLVGLLGLQSFSSLILQSYQSVIERNIVIALFLTMLTGTAGNAGNQSSAIVIRGLATGEIHEGNRFKVIWREARAAVASAVVLSIASFVRVSLTPGATTVATLAVAIAMGTTVVGAVMFGTIAPIVLDGMGVDPVNFASPALATLTDVSGVFILCCVAKLMLGSG 1782
G ++P GQ Q + +PLH + R ++ VR++ D Q PS G G++E +D L D IYVT++G+L GY+TM LL P TP+ ++++ E ++R ++ E+A+ RLR V AP+VD +G LV +L+P+DLLNEME E T+D++R G G+SYF TP++ + SR GW+V LL LQS SS++L +Q VIERN+VIALFLTMLTGTAGNAGNQSSA VIRGLATGEI N +KV+ RE R A AV+L+ A+F+RV+LTPG+T + + V +AMG T + A++ GT++PI+L+ +G+DP N ASPALAT TDV+GV ILC +A ++LG G
Sbjct: 85 GRYQVVPRVKGQTQW---ALTLPLHITDRHNQTALTTIEDCLNIVRSISVADLQMPPS----------GDGAEEAPASLSDL-----LADSIYVTQEGELRGYVTMGDLLMASPHTPLKTVLKPTE-VVRISENLEEASKRLRQRFVTMAPLVDEKGQLVGILSPNDLLNEMEAELTEDLLRFEGIFPSETMEKVGDSYFATPVIEHIKSRAGWVVSLLFLQSLSSIVLTKFQGVIERNLVIALFLTMLTGTAGNAGNQSSATVIRGLATGEITHANAWKVVLRELRIASVMAVLLAGAAFMRVALTPGSTVASAVVVGLAMGATCLVAIILGTLSPIILEWIGLDPCNCASPALATATDVAGVLILCTIASVLLGGG 443
BLAST of mRNA_H-paniculata_contig3371.9009.1 vs. uniprot
Match: A0A6T6NC75_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6NC75_9RHOD) HSP 1 Score: 245 bits (625), Expect = 5.770e-69 Identity = 145/290 (50.00%), Postives = 194/290 (66.90%), Query Frame = 1
Query: 928 ALTDRIYVTKD----GKLEGYITMTSLLTNDPTTPVLSLVRELEELLREGDSWEQAAHRLRHANVLAAPVVDSEGVLVAVLNPSDLLNEMEIEATDDIMRQSGSGG----GESYFGTPLVRLVASRVGWLVGLLGLQSFSSLILQSYQSVIERNIVIALFLTMLTGTAGNAGNQSSAIVIRGLATGEIHEGNRFKVIWREARAAVASAVVLSIASFVRVSLTPGATTVATLAVAIAMGTTVVGAVMFGTIAPIVLDGMGVDPVNFASPALATLTDVSGVFILCCVAKLML 1773
++ DR++V KL GY+TM LL P V ++ + E +L D + +LR NVL APVVD E LV VL +D++ E+E EATDD++R G GG ESYFGT + +L R+ WLVGLL LQS SS++L YQS+IE N+V+ALFLTMLTGT GNAGNQSSA++IRGLATGEI N +V+ +E ++ + VL+I SF RV T G+ +++ V+IA+ T V A++ GTIAP++L+ +GVDP N ASPALATLTDV GV ILC +A ++L
Sbjct: 162 SILDRLFVVDQLVGKEKLVGYVTMLDLLLAKPDEVVENVSKTNELVLSIDDDLDNVLRKLRRDNVLIAPVVDVEEKLVGVLTATDMIRELEFEATDDLLRYGGVGGDEETAESYFGTSIRKLFFGRITWLVGLLMLQSLSSIVLGRYQSLIEANVVLALFLTMLTGTGGNAGNQSSALIIRGLATGEIRRENYSRVVMKEIAVGISLSFVLAIVSFGRVYFTTGSNVLSSFTVSIAVLLTTVFAILGGTIAPMLLERVGVDPCNCASPALATLTDVGGVLILCSLASILL 451
BLAST of mRNA_H-paniculata_contig3371.9009.1 vs. uniprot
Match: M2WSY5_GALSU (Magnesium transporter, MgtE family n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WSY5_GALSU) HSP 1 Score: 219 bits (557), Expect = 6.330e-61 Identity = 135/286 (47.20%), Postives = 182/286 (63.64%), Query Frame = 1
Query: 934 TDRIYV--TKDGKLEGYITMTSLLTNDPTTPVLSLVRELEELLREGDSWEQAAHRLRHANVLAAPVVDSEGVLVAVLNPSDLLNEMEIEATDDIMRQSGSGGGE---SYFGTPLVRLVASRVGWLVGLLGLQSFSSLILQSYQSVIERNIVIALFLTMLTGTAGNAGNQSSAIVIRGLATGEIHEGNRFKVIWREARAAVASAVVLSIASFVRVSLTPGATTVATLAVAIAMGTTVVGAVMFGTIAPIVLDGMGVDPVNFASPALATLTDVSGVFILCCVAKLMLG 1776
TDR++V ++G+L GYI + LL + V +++ + + R+ S E AA ++R V APVVDSEG + ++N D++ E+E EA +D MR SG + SYF T L+ R+ WLV LL QS SS+IL +Q +IER++VIALFLTML GT GNAGNQSSAIVIRGLATGEI N + V+ RE R AV A +LSI FVRV T A L V+IA+ V+ +++ G + P++L+ G DP ASPALAT TDV GV ++C VA ++LG
Sbjct: 33 TDRLFVLDAENGELRGYILIEELLFVELEQNVTVFMKKCDVVFRDDTSLEIAARKVRSFGVFCAPVVDSEGNFLGIVNALDIIREVEFEAAEDFMRVSGLNSVDVFQSYFETSSFSLIRERLSWLVALLLFQSISSIILGFFQDLIERHVVIALFLTMLIGTGGNAGNQSSAIVIRGLATGEIDRRNAYLVVSREFRIAVIMASILSIVGFVRVLFTVPNNIKAALTVSIALFLIVISSIVAGAVTPLLLEQCGADPAYCASPALATATDVVGVLLICAVAIVVLG 318
BLAST of mRNA_H-paniculata_contig3371.9009.1 vs. uniprot
Match: A0A7J7ILB5_9RHOD (CBS domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ILB5_9RHOD) HSP 1 Score: 216 bits (550), Expect = 7.030e-57 Identity = 155/390 (39.74%), Postives = 220/390 (56.41%), Query Frame = 1
Query: 667 AERITMTHSFVGEPSLIPYGMGQDQT-QRGVVQIPLHYSVRQTVDFVRAVFTRDRQEYPSSLEASSLGGRGKGSQEG----------GLLQADTRTPAALTDRIYVTKD--GKLEGYITMTSLL-TNDPTTPVLSLVRELEELLREGDSWEQAAHRLRHANVLAAPVVDSEGVLVAVLNPSDLLNEMEIEATDDIMRQSG------SGGGESYFGTPLVRLVASRVGWLVGLLGLQSFSSLILQSYQSVIERNIVIALFLTMLTGTAGNAGNQSSAIVIRGLATGEIHEGNRFKVIWREARAAVASAVVLSIASFVRVSLTPGATTVATLAVAIAMGTTVVGAVMFGTIAPIVLDGMGVDPVNFASPALATLTDVSGVFILCCVAKLMLG 1776
A+R + +G S+ G+ D T +R V +PL +VR+ + + + + +AS+ G G+ +QA + L D +YV L G++++ LL D + VR +L + +E A RLR+A L APVVDSE LV ++ +D++ EME+EATDDI+R G + ESYF T V R WLV LL LQS SS++L Y S+IER++V+ALFLTM+ G GNAGNQSSA+VIRGLATGEI+ N +V+WRE A VL+ FVRVS++ G +A++ V+ ++ TV AV+ GTIAP+VL +G+DP + ASP L+TLTD+ GV LC VA ++LG
Sbjct: 227 ADREACVAAIIGPGSVPAGGVWTDATSRREAVTVPLGCTVRECKNLLWQIHRACSAV--AEADASTSNGSDSGTNAPVSSCVQLSVTASMQAQNESAPGL-DGLYVLDPCTSGLVGFLSLEDLLFAGDDEQKIDHFVRPCPTVLTVDEEFEAAVRRLRNAGALTAPVVDSELRLVGLITAADIIREMELEATDDILRFGGVESPLQTNDIESYFKTSTRSFVIGRSAWLVALLLLQSVSSIVLGHYSSLIERHVVLALFLTMMVGAGGNAGNQSSALVIRGLATGEINASNAGRVLWRELVVGCTIATVLAAVGFVRVSMS-GGDILASVTVSASLWITVFMAVLTGTIAPLVLARLGLDPCHCASPLLSTLTDIGGVLALCLVASIILG 612
BLAST of mRNA_H-paniculata_contig3371.9009.1 vs. uniprot
Match: A0A7S4A0Q1_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A0Q1_9STRA) HSP 1 Score: 206 bits (525), Expect = 7.580e-55 Identity = 125/283 (44.17%), Postives = 180/283 (63.60%), Query Frame = 1
Query: 940 RIYVT-KDGKLEGYITMTSLLTNDPTTPVLSLVRELEELLREGDSWEQAAHRL-RHANVLAAPVVDSEGVLVAVLNPSDLLNEMEIEATDDIMRQSGSGGGESYFGTPLVRLVASRVGWLVGLLGLQSFSSLILQSYQSVIERNIVIALFLTMLTGTAGNAGNQSSAIVIRGLATGEIHEGNRFK-VIWREARAAVASAVVLSIASFVRV-SLTPGATTVATLAV-AIAMGTTVVGAVMFGTIAPIVLDGMGVDPVNFASPALATLTDVSGVFILCCVAKLML 1773
R++V +DG+ GY+ + LL +P + L + E +LR + + A R+ A PVVDS G LV L P +++ E+E T+D+ R + +G GESYFG+ + LV +R WL LL LQS SS++L ++ +++R++ +ALFLTMLTGTAGNAGNQ+SA+VIRGLATGEI G ++ V+WRE R A+ ++ L +A+F RV + PG V T V A A +T++ A++ G AP++LD +GVDP N ASPALAT D+ GV LC + L
Sbjct: 177 RVWVNGQDGRFAGYVGASQLLLAEPDASLAFLAKPPEAVLRADEDLDDALARVVNRGGSGALPVVDSNGALVGALAPGEVMVELEQAVTEDVARYAATGAGESYFGSRIQDLVCARGAWLAALLVLQSASSVVLGKFEGLLQRHLALALFLTMLTGTAGNAGNQTSALVIRGLATGEIRAGRDWRRVLWRETRVALPLSIALGLAAFGRVVAAVPGRMAVRTAGVVAFATTSTILAAILVGVGAPLLLDAVGVDPCNCASPALATAVDLLGVVFLCVTGQRFL 459
BLAST of mRNA_H-paniculata_contig3371.9009.1 vs. uniprot
Match: A0A0G0A955_9BACT (Magnesium transporter MgtE n=1 Tax=candidate division TM6 bacterium GW2011_GWF2_33_332 TaxID=1619080 RepID=A0A0G0A955_9BACT) HSP 1 Score: 202 bits (515), Expect = 1.430e-54 Identity = 116/299 (38.80%), Postives = 186/299 (62.21%), Query Frame = 1
Query: 886 QEGGLLQADTRTPAALTDRIYVT-KDGKLEGYITMTSLLTNDPTTPVLSLVRELEELLREGDSWEQAAHRLRHANVLAAPVVDSEGVLVAVLNPSDLLNEMEIEATDDIMRQSGSGG-GESYFGTPLVRLVASRVGWLVGLLGLQSFSSLILQSYQSVIERNIVIALFLTMLTGTAGNAGNQSSAIVIRGLATGEIHEGNRFKVIWREARAAVASAVVLSIASFVRVSLTPGATTVATLAVAIAMGTTVVGAVMFGTIAPIVLDGMGVDPVNFASPALATLTDVSGVFILCCVAKLMLG 1776
++G L T DRIY+T ++ KL GYI + L+ N P T + + + E ++ + E A++++H ++L+ PVVD+E + ++ + ++ +E EA++D+ + SG G ++YF TP RL+ R WL+ LL LQS SS +L SY+ +I +N ++ FL ML GT GNAGNQS A+VIRGL+TGEIH N KV++RE R A+ A+ L++ F RV LT +A + ++I++ VV ++ GT+ P++L+ + +DP + A+P LATL D+ G+ I C +A +LG
Sbjct: 62 KQGVALMQRLSTDQEYVDRIYITDRNNKLTGYIKIEDLVLNKPQTLISDIFHQNELIINVHEDQEIVANQMKHYDLLSVPVVDNENNFLGIITADESMDVIEEEASEDVYKMSGLGSVDQTYFQTPFWRLIWQRSFWLITLLILQSASSFVLSSYEKLITQNAILFFFLNMLIGTGGNAGNQSGALVIRGLSTGEIHRKNGLKVLFREFRVAIIIALFLAVIGFERVYLTRH-NLIAAVVISISLSAIVVVSIFLGTLLPLLLERLNIDPAHAAAPFLATLMDIIGISIYCIIASKILG 359 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3371.9009.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3371.9009.1 >prot_H-paniculata_contig3371.9009.1 ID=prot_H-paniculata_contig3371.9009.1|Name=mRNA_H-paniculata_contig3371.9009.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=588bp MKAGQGLTKPYFFYLHLTLLLSCSFSTALIPTARLSISCGRTAGLASWSNback to top mRNA from alignment at H-paniculata_contig3371:2747..13630- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3371.9009.1 ID=mRNA_H-paniculata_contig3371.9009.1|Name=mRNA_H-paniculata_contig3371.9009.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10884bp|location=Sequence derived from alignment at H-paniculata_contig3371:2747..13630- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3371:2747..13630- >mRNA_H-paniculata_contig3371.9009.1 ID=mRNA_H-paniculata_contig3371.9009.1|Name=mRNA_H-paniculata_contig3371.9009.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3528bp|location=Sequence derived from alignment at H-paniculata_contig3371:2747..13630- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |