mRNA_H-paniculata_contig33625.8999.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig33625.8999.1 vs. uniprot
Match: D8LSH6_ECTSI (Cysteine desulfurase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSH6_ECTSI) HSP 1 Score: 219 bits (557), Expect = 1.140e-67 Identity = 107/119 (89.92%), Postives = 114/119 (95.80%), Query Frame = 1
Query: 1 KVTYLPVQRGSGLVDLGELEAAIRPDTVACSVMAVNNEIGVVQPLKEIGEICRKNKVFFHSDIAQMLGKLPIDVNEMKIDLASLSSHKIYGPKGVGALYVRRRPRVRLEPVFSGGGQER 357
+VTYLPVQ GSGLVDL EL AAIRPDTVACSVMAVNNEIGVVQPLKEIGEICRKNKVFFHSDIAQMLGK+PI V++ K+DLASLSSHKIYGPKG+GALYVRRRPRVRL+PVFSGGGQER
Sbjct: 156 EVTYLPVQSGSGLVDLDELAAAIRPDTVACSVMAVNNEIGVVQPLKEIGEICRKNKVFFHSDIAQMLGKMPISVDDFKMDLASLSSHKIYGPKGIGALYVRRRPRVRLDPVFSGGGQER 274
BLAST of mRNA_H-paniculata_contig33625.8999.1 vs. uniprot
Match: A0A662WSL2_9STRA (Cysteine desulfurase (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WSL2_9STRA) HSP 1 Score: 189 bits (481), Expect = 8.620e-58 Identity = 93/118 (78.81%), Postives = 106/118 (89.83%), Query Frame = 1
Query: 4 VTYLPVQRGSGLVDLGELEAAIRPDTVACSVMAVNNEIGVVQPLKEIGEICRKNKVFFHSDIAQMLGKLPIDVNEMKIDLASLSSHKIYGPKGVGALYVRRRPRVRLEPVFSGGGQER 357
VTYLPV +GLVDL +L+AAIRPDT S++AV+NEIGV+QPLKEIGEICR +KVFFH+D AQMLGKLPIDVNEMKID+ SLS HK+YGPKGVGA+YVRRRPRVRLEP+ SGGGQER
Sbjct: 190 VTYLPVGT-NGLVDLEDLKAAIRPDTALVSIIAVHNEIGVLQPLKEIGEICRAHKVFFHTDAAQMLGKLPIDVNEMKIDVMSLSGHKVYGPKGVGAMYVRRRPRVRLEPIISGGGQER 306
BLAST of mRNA_H-paniculata_contig33625.8999.1 vs. uniprot
Match: A0A7S0TC13_9STRA (Cysteine desulfurase (Fragment) n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0TC13_9STRA) HSP 1 Score: 191 bits (485), Expect = 2.390e-57 Identity = 88/118 (74.58%), Postives = 104/118 (88.14%), Query Frame = 1
Query: 4 VTYLPVQRGSGLVDLGELEAAIRPDTVACSVMAVNNEIGVVQPLKEIGEICRKNKVFFHSDIAQMLGKLPIDVNEMKIDLASLSSHKIYGPKGVGALYVRRRPRVRLEPVFSGGGQER 357
VTYLPVQ+ +G VD+ EL+AA+R DT+ SVMAVNNEIG +QPLKEIGE+CR K+ FH D AQMLGK+PIDV+E KIDL S+SSHK+YGPKG+GALYVRRRPR+RLEP+FSGGGQER
Sbjct: 219 VTYLPVQQATGRVDMDELKAAVRDDTILVSVMAVNNEIGTLQPLKEIGELCRSRKIVFHCDAAQMLGKMPIDVDEFKIDLMSMSSHKVYGPKGIGALYVRRRPRIRLEPIFSGGGQER 336
BLAST of mRNA_H-paniculata_contig33625.8999.1 vs. uniprot
Match: A0A835YNJ7_9STRA (Cysteine desulfurase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNJ7_9STRA) HSP 1 Score: 192 bits (487), Expect = 3.230e-57 Identity = 93/119 (78.15%), Postives = 107/119 (89.92%), Query Frame = 1
Query: 1 KVTYLPVQRGSGLVDLGELEAAIRPDTVACSVMAVNNEIGVVQPLKEIGEICRKNKVFFHSDIAQMLGKLPIDVNEMKIDLASLSSHKIYGPKGVGALYVRRRPRVRLEPVFSGGGQER 357
+VTYLPVQ +GL+D+ ELE+AIRPDT SVMAVNNEIGV+QP+KEIG +CR KVFFHSD+AQMLGKL I+V++M +DL SLSSHK+YGPKGVGALYVRRRPRVRLEPVFSGGGQER
Sbjct: 156 EVTYLPVQT-NGLIDMAELESAIRPDTALVSVMAVNNEIGVIQPIKEIGALCRARKVFFHSDMAQMLGKLRINVDDMNVDLVSLSSHKVYGPKGVGALYVRRRPRVRLEPVFSGGGQER 273
BLAST of mRNA_H-paniculata_contig33625.8999.1 vs. uniprot
Match: A0A7S2GXZ8_9STRA (Cysteine desulfurase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GXZ8_9STRA) HSP 1 Score: 192 bits (487), Expect = 5.500e-57 Identity = 90/119 (75.63%), Postives = 107/119 (89.92%), Query Frame = 1
Query: 1 KVTYLPVQRGSGLVDLGELEAAIRPDTVACSVMAVNNEIGVVQPLKEIGEICRKNKVFFHSDIAQMLGKLPIDVNEMKIDLASLSSHKIYGPKGVGALYVRRRPRVRLEPVFSGGGQER 357
+VTYLPVQ+ +GL+DLGELE A+RP+T SVMA+NNEIGV+QPLKEIG +CR K+FFH+D AQM+GK+PIDVNEM IDL S+S HK+YGPKG+GALYVRRRPRVRLEP+FSGGGQER
Sbjct: 182 EVTYLPVQK-NGLIDLGELEDAMRPETSLVSVMAINNEIGVLQPLKEIGAMCRARKIFFHTDAAQMIGKVPIDVNEMNIDLMSISGHKVYGPKGIGALYVRRRPRVRLEPIFSGGGQER 299
BLAST of mRNA_H-paniculata_contig33625.8999.1 vs. uniprot
Match: A0A7S3P3L4_9STRA (Cysteine desulfurase (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P3L4_9STRA) HSP 1 Score: 192 bits (487), Expect = 8.770e-57 Identity = 90/119 (75.63%), Postives = 106/119 (89.08%), Query Frame = 1
Query: 1 KVTYLPVQRGSGLVDLGELEAAIRPDTVACSVMAVNNEIGVVQPLKEIGEICRKNKVFFHSDIAQMLGKLPIDVNEMKIDLASLSSHKIYGPKGVGALYVRRRPRVRLEPVFSGGGQER 357
+VTYLPVQ +G VD+ EL+AAIR DT+ SVMAVNNEIG +QP++EIGE+CR NK+ FH D AQMLGK+P++VN+MKIDL S+SSHKIYGPKGVGALYVRRRPRVRLEP+FSGGGQER
Sbjct: 207 EVTYLPVQAATGRVDMDELKAAIRDDTILVSVMAVNNEIGTLQPIQEIGELCRSNKIIFHCDAAQMLGKMPLNVNDMKIDLLSMSSHKIYGPKGVGALYVRRRPRVRLEPLFSGGGQER 325
BLAST of mRNA_H-paniculata_contig33625.8999.1 vs. uniprot
Match: A0A1Z5KA33_FISSO (Cysteine desulfurase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KA33_FISSO) HSP 1 Score: 190 bits (482), Expect = 3.530e-56 Identity = 87/119 (73.11%), Postives = 105/119 (88.24%), Query Frame = 1
Query: 1 KVTYLPVQRGSGLVDLGELEAAIRPDTVACSVMAVNNEIGVVQPLKEIGEICRKNKVFFHSDIAQMLGKLPIDVNEMKIDLASLSSHKIYGPKGVGALYVRRRPRVRLEPVFSGGGQER 357
+VTYLPVQ +G +DL +L+ AIRPDT+ CSVMAVNNEIG +QPL+EIG +CR+NK+ FH D AQMLGKLPI VN+++IDL S+SSHK+YGPKG+GALYVRRRPRVRLEP+ SGGGQER
Sbjct: 182 EVTYLPVQAATGRIDLNQLKEAIRPDTILCSVMAVNNEIGTLQPLQEIGALCRQNKIVFHCDAAQMLGKLPIHVNDLQIDLMSMSSHKVYGPKGIGALYVRRRPRVRLEPLLSGGGQER 300
BLAST of mRNA_H-paniculata_contig33625.8999.1 vs. uniprot
Match: A0A7S2EWZ4_TRICV (Cysteine desulfurase n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EWZ4_TRICV) HSP 1 Score: 190 bits (482), Expect = 3.840e-56 Identity = 89/118 (75.42%), Postives = 104/118 (88.14%), Query Frame = 1
Query: 4 VTYLPVQRGSGLVDLGELEAAIRPDTVACSVMAVNNEIGVVQPLKEIGEICRKNKVFFHSDIAQMLGKLPIDVNEMKIDLASLSSHKIYGPKGVGALYVRRRPRVRLEPVFSGGGQER 357
VTYLPVQR +G VDL EL +A+R DTV SVMAVNNEIG QP++EIG +CR+ KVFFH D AQMLGK+P+DVNEMK+DL S+SSHK+YGPKG+GALYVRRRPRVRL+P+FSGGGQER
Sbjct: 191 VTYLPVQRATGRVDLNELASAMRDDTVLVSVMAVNNEIGTRQPMEEIGAMCRERKVFFHCDAAQMLGKMPMDVNEMKVDLMSMSSHKVYGPKGIGALYVRRRPRVRLDPIFSGGGQER 308
BLAST of mRNA_H-paniculata_contig33625.8999.1 vs. uniprot
Match: A0A7R9TYC9_9VIRI (Cysteine desulfurase n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TYC9_9VIRI) HSP 1 Score: 189 bits (479), Expect = 5.140e-56 Identity = 90/118 (76.27%), Postives = 104/118 (88.14%), Query Frame = 1
Query: 4 VTYLPVQRGSGLVDLGELEAAIRPDTVACSVMAVNNEIGVVQPLKEIGEICRKNKVFFHSDIAQMLGKLPIDVNEMKIDLASLSSHKIYGPKGVGALYVRRRPRVRLEPVFSGGGQER 357
VTYLPVQ +GLVDL LE AIRPDT CSVMAVNNEIGVVQP+K+IGEICRK+KVFFH+D AQ +GK+PIDVN+M IDL S+S HK+YGPKG+GA+YVRRRPRVRL P+ +GGGQER
Sbjct: 160 VTYLPVQT-NGLVDLQVLEEAIRPDTAVCSVMAVNNEIGVVQPIKQIGEICRKHKVFFHTDAAQAVGKVPIDVNDMNIDLMSISGHKLYGPKGIGAIYVRRRPRVRLSPIINGGGQER 276
BLAST of mRNA_H-paniculata_contig33625.8999.1 vs. uniprot
Match: A0A6P8IVF4_ACTTE (Cysteine desulfurase, mitochondrial n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IVF4_ACTTE) HSP 1 Score: 188 bits (478), Expect = 7.080e-56 Identity = 89/119 (74.79%), Postives = 106/119 (89.08%), Query Frame = 1
Query: 1 KVTYLPVQRGSGLVDLGELEAAIRPDTVACSVMAVNNEIGVVQPLKEIGEICRKNKVFFHSDIAQMLGKLPIDVNEMKIDLASLSSHKIYGPKGVGALYVRRRPRVRLEPVFSGGGQER 357
+VTYL V + +GL+DLGELE +IRPDT SVM +NNEIGV+QP+KEIGEICRKNKVFFH+D AQ +GK+P+DVN+MKIDL S+S HKIYGPKG+GALYVRRRPRVR+EP+ SGGGQER
Sbjct: 158 EVTYLRVNK-NGLIDLGELEKSIRPDTSLVSVMTINNEIGVIQPIKEIGEICRKNKVFFHTDAAQAVGKIPLDVNDMKIDLLSVSGHKIYGPKGIGALYVRRRPRVRVEPIQSGGGQER 275 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig33625.8999.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig33625.8999.1 >prot_H-paniculata_contig33625.8999.1 ID=prot_H-paniculata_contig33625.8999.1|Name=mRNA_H-paniculata_contig33625.8999.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=119bp KVTYLPVQRGSGLVDLGELEAAIRPDTVACSVMAVNNEIGVVQPLKEIGEback to top mRNA from alignment at H-paniculata_contig33625:1362..2265+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig33625.8999.1 ID=mRNA_H-paniculata_contig33625.8999.1|Name=mRNA_H-paniculata_contig33625.8999.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=904bp|location=Sequence derived from alignment at H-paniculata_contig33625:1362..2265+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig33625:1362..2265+ >mRNA_H-paniculata_contig33625.8999.1 ID=mRNA_H-paniculata_contig33625.8999.1|Name=mRNA_H-paniculata_contig33625.8999.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=714bp|location=Sequence derived from alignment at H-paniculata_contig33625:1362..2265+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |