mRNA_H-paniculata_contig3361.8998.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3361.8998.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI) HSP 1 Score: 623 bits (1607), Expect = 4.360e-208 Identity = 340/641 (53.04%), Postives = 426/641 (66.46%), Query Frame = 1
Query: 319 SAVTNQVDDQIWGEGPDRSCRGKITKRYMLAFGALAGGAALALGLCLGLSNEASASSSRAVGQATDPASLGCFYDRRSSRLMTDVLSDDSMTPPLCKDHCDGLGAAYYGLQYGRECWCGADGEL-DRFDEDGPGAKCDYPCVGDKSSICGGYLAMTAYDIATDATGLIEEEAPSPTPSGGSGSTKCSGDPTYRWASSSNTMYIESGGCGTLTGIYEAYP-NGPLRVLDEDDKVIEGGTPTGYWLLMSSLTVYDGAVFQCHGVSDGGDCDVLRIQSDGSKDFHEVRGHGGSLSFYGTKVTSWDTDSGKQQKTYKGGRSFINCVSEVQSPSA-DC---AKNDRGECRMDIINSEMGDLGWFDAESYGLTWKVRGFCA---DLSNP---EVFDEVQVYGDIQGSDIYGMYYGMYSYGHEGGVWTNNKMHDNILYGFDPHDDSDDLEIAYNEVWGNGNHGIIASKRCNDVSIHDNEVYSGGPDAVGIFLHRSSDNAVVYNNYVHEMQDAGIAIMESMDGDIYDNVFEDVKYGIRISLGGANNKIHDNVFDTCSSYGLYTYEGSDPPDV--SNGRPSGNVFENNKIYNT--EVGAKIKDGDDNEFIGNEFTGTDYFEFEDSDNTLWSENTIPSGACVDGSADWATG 2193
+A DQIWG R GK+T++ ++A GAL G AALA+GL +GL +++S + GQ+ DP SLGCF D R+M L+D +MTP +C +C+ LG YY +Q+ ECWC + D G G CD+ C GD ICGG+ A T Y++ T++T +PTPS +T C T R+ + Y E GGCGTLT +YEA +GPL VLDE++ V+ GGTPTGYWLL +L V DG+ HG + GD DVLR+ S S DF EVRG+GG+L F T VTSWDTD+G++++ GRSFINCV++ + DC + + GECRMDII+S MG++GWFDAESYGLTWKVRG C D P E+F++ VYGDI S+IYGMYYG YSYGH+GGVW +N M DNI YGFDPHDDSDDL I+ N V+GNGNHGIIASKRCN+V I +NEVY GG DAVGIFLHRSSD A V++N V+ MQDAG+A+MES D +IYDN F + +YGIR+SLG N I +N+F + YGLYTY GSD PDV SNGRPS NVF+ N I +G IK+GD N FI N FTG +EFEDS +T W +NT G C+DGS D+A G
Sbjct: 9 NAAAADTGDQIWG---GRQSSGKLTRKRVMAGGALLGAAALAVGLYVGLKDDSSTDRTLITGQS-DPNSLGCFADTSDGRVMEAQLTDQAMTPDMCNAYCEDLGYYYYAVQWSIECWCAPETTTADELAVHGLGT-CDFACGGDSDQICGGFWAFTVYEVGTEST--------TPTPSA---TTSCDSAATVRFTD--DIAYFEGGGCGTLTQMYEAQEGDGPLYVLDENNDVV-GGTPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLST-SDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDNT--GGGCLDGSTDFAEG 627
BLAST of mRNA_H-paniculata_contig3361.8998.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 565 bits (1457), Expect = 3.170e-182 Identity = 313/614 (50.98%), Postives = 387/614 (63.03%), Query Frame = 1
Query: 523 SLGCFYDRRSSRLMT--DVLSDDS-MTPPLCKDHCDGLGAAYYGLQYGRECWCGADGELDRFDEDGPGAKCDYPCVGDKSSICGGYLAMTAYDIATDATGLIEEEAPSPTPSGGSG--------------------------STKCSGD---PTYRWASSSNT---MYIESGGCGTLTGIY-------EAYPNGPLRVLDEDDKVIEGGTPTGY---WLLMSSLTVYDGAVFQCHGVSDGGDCDVLRIQSDGSKDFHEVRGHGGSLSFYGTKVTSWDTDSGKQQKTYKGGRSFINCVSEVQSPSADC---AKNDRGECRMDIINSEMGDLGWFDAESYGLTWKVRGFCADLSNPEVFDEVQVYGDIQGSDIYGMYYGMYSYGHEGGVWTNNKMHDNILYGFDPHDDSDDLEIAYNEVWGNGNHGIIASKRCNDVSIHDNEVYSGGPDAVGIFLHRSSDNAVVYNNYVHEMQDAGIAIMESMDGDIYDNVFEDVKYGIRISLGGANNKIHDNVFDTCSSYGLYTYEGSDPPDVSNGRPSGNVFENNKIYNTEVGAKIKDGDDNEFIGNEFTGTDYFEFEDSDNTLWSENTIPSGACV--DGSADWATGSDPPSKC 2214
S+GCF D S R+++ +LS +S MT C D C+G + Y+G +Y EC+C + G D DE G + CD C GD S CGG+ A+ Y + E+ P+P S+ C D P++R+A+SS +Y E GC T+T +Y + GP+ +LD+D ++ P+G WLL + L + G VF C G S GGDC+ LRIQS GS DFHEVRGHGGSL F T VTSWDT + + Q+TY+ GRSF+NCVSE + DC AKN+ GECRMDIINSE+ LG+FD+ESYG+TWKVRGFC DLSNPEVF+ VYGD+ GSDI+ +YYG YSYGH+GGVWTNNKMHDN YGFDPHDDSD L IAYNEV+ N NHGIIASKRCN+V I +NEV GG A GIFLHRSSD A V++N + MQDAGIA++ES D IY N+ KYGIR+SLG NN+++ N F S YGLYTYEGSD PDVS+GRPSGNV N + + +G KIK+GDDNEF N F D FEF +S NT+WS N I G C+ D D A+GSD C
Sbjct: 289 SVGCFVDDSSDRVLSGDSMLSINSVMTAAYCADFCEG--STYFGTEYAFECFCSSSG--DSPDELGEASNCDMTCSGDSSETCGGFNAIQVYML---------EDGPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMEISSSCGDDEDRPSFRYAASSGVAGRLYAEGEGCFTMTDLYNFRGTENDGSSKGPVYMLDDDGTKLD--IPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGD-DCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVSDGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDIGDG-CIEEDDEFDAASGSDSIPIC 885
BLAST of mRNA_H-paniculata_contig3361.8998.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE) HSP 1 Score: 484 bits (1247), Expect = 5.860e-157 Identity = 251/447 (56.15%), Postives = 306/447 (68.46%), Query Frame = 1
Query: 925 ESGGCGTLTGIY-------EAYPNGPLRVLDEDDKVIEGGTP-TGYWLLMSSLTVYDGAVFQCHGVSDGGDCDVLRIQSDGSKDFHEVRGHGGSLSFYGTKVTSWDTDSGKQQKTYKGGRSFINCVSE-VQSPSAD-CAKNDRGECRMDIINSEMGDLGWFDAESYGLTWKVR---------GFCADLSNPEVFDEVQVYGDIQGSDIYGMYYGMYSYGHEGGVWTNNKMHDNILYGFDPHDDSDDLEIAYNEVWGNGNHGIIASKRCNDVSIHDNEVYSGGPDAVGIFLHRSSDNAVVYNNYVHEMQDAGIAIMESMDGDIYDNVFEDVKYGIRISLGGANNKIHDNVFDTCSSYGLYTYEGSDPPDVSNGRPSGNVFENNKIYNTEVGAKIKDGDDNEFIGNEFTGTDYFEFEDSDNTLWSENTIPSGACVDGSADWATGSDPPS 2208
ES GC TLT +Y + GPL +LD I T T WLL + L V +GA+F C G +GGDCD LRIQS G D++EVRGHGGS+ F T VTSWDT + + Q+TY+GGRSF+NCVSE + + D AKND GECRMDIINSEMG +G+FD+ESYGLTWKVR GFC DLSNP+VF+ VYGDI+ SDI+ MYYG YSYGH+GGVWTNN+MHDN Y +A N+V+ N NHGIIASKRCN+V I+DN+V GGPDAVGIFLHRSSDNA VY N + M DAGIA++ES + DI+DN + V++GIR+SLG N ++DN F+ CS +GLYTY GSD PDVSNGRP+GN F NNK+ N+ G K K+ D+ NEFTGT+ EF D+ T WS N++PSG C+D S PPS
Sbjct: 18 ESEGCFTLTDLYNFRGTENDGSSKGPLYMLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVSNGRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGNSLPSGVCIDNITSDDGNSVPPS 452
BLAST of mRNA_H-paniculata_contig3361.8998.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 479 bits (1232), Expect = 5.240e-155 Identity = 244/441 (55.33%), Postives = 305/441 (69.16%), Query Frame = 1
Query: 925 ESGGCGTLTGIYE---AYPNG----PLRVLDEDDKVIEGGTPT-GYWLLMSSLTVYDGAVFQCHGVSDGGDCDVLRIQSDGSKDFHEVRGHGGSLSFYGTKVTSWDTDSGKQQKTYKGGRSFINCVSEVQSPSADCAKNDRGECRMDIINSEMGDLGWFDAESYGLTWKVRGFCADLSNPEVFDEVQVYGDIQGSDIYGMYYGMYSYGHEGGVWTNNKMHDNILYGFDPHDDSDDLEIAYNEVWGNGNHGIIASKRCNDVSIHDNEVYSGGPDAVGIFLHRSSDNAVVYNNYVHEMQDAGIAIMESMDGDIYDNVFEDVKYGIRISLGGANNKIHDNVFDTCSSYGLYTYEGSDPPDVSNGRPSGNVFENNKIYNTEVGAKIKDGDDNEFIGNEFTGTDYFEFEDSDNTLWSENTIPSGAC---VDGSADWATGSDPPSKC 2214
+ GGC TL+ +Y Y NG P+ VLD +D+V E T T G WLL + L V GA C G GG+C LRI+S DF E+RGHGG+L F T VTSWD D K Q+TYK GRSFI CVSEV + CA N+ GECRMDII+SEMG LG+ +E+YG+TWKVRGFC+DLSNP+VFD+V VYGD++GSDI+ MYYGMYS+GH+GGVWTNN MHDN YGFDPHDDSD L IA N+V+ N NHGIIASKRCN+V I+DNEVY GG DA GIFLHRS D++ VY N + M DAGIA++E+ DI+DN + ++GIR+ LG +NNK+HDNVF + G++TY GSD P V GRP N F NN I TE G KIK+ D+ N F+GT EF ++ + +WS N+IP+ C +D ++ + S P +C
Sbjct: 7 DGGGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTCAINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGGGRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNSIPTNTCLEDIDNNSTFTGSSGLPLEC 447
BLAST of mRNA_H-paniculata_contig3361.8998.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI) HSP 1 Score: 480 bits (1236), Expect = 1.770e-154 Identity = 246/431 (57.08%), Postives = 299/431 (69.37%), Query Frame = 1
Query: 910 NTMYIESGGCGTLTGIY------EAYPNGPLRVLDED-DKVIEGGTPTGYWLLMSSLTVYDGAVFQCHGVSDGGDCDVLRIQSDGSKDFHEVRGHGGSLSFYGTKVTSWDTDSGKQQKTYKGGRSFINCVSEVQSPSADC---AKNDRGECRMDIINSEMGDLGWFDAESYGLTWKVRGFCADLSNPEVFDEVQVYGDIQGSDIYGMYYGMYSYGHEGGVWTNNKMHDNILYGFDPHDDSDDLEIAYNEVWGNGNHGIIASKRCNDVSIHDNEVYSGGPDAVGIFLHRSSDNAVVYNNYVHEMQDAGIAIMESMDGDIYDNVFEDVKYGIRISLGGANNKIHDNVFDTCSSYGLYTYEGSDPPD--VSNGRPSGNVFENNKIYNTEVGAKIKDGDDNEFIGNEFTGTDYFEFEDSDNTLWSENTIPSGACV 2166
NT E GC T+T +Y + GP+ LD+ + V+ + WLL + L + GAVF C G S GGDCD LRIQS G DFHEVR HGGS+ F T VTSWDT + Q TY GGRSF+NCVSE + C A+N+ GECRMDIINSE+G LG+FD+ESYGLTWKVRGFC DLSNP+VFD VYG++ GSDI+ YYG YSYGH+GGVW NN+MHDN YGFDPHDDSD L IIASKRCN+V I++NEVY GGP A GIFLHRSSD A+V++N VH+MQDAG+A++ESM+ DIY+N F VK+GIR+SLG + N +H+N+F+ S+ GLYTY+GSD P VS+GRPS N+FENN+I N G KIK+GDD N FTGT EF D+ NT W NT+P G C+
Sbjct: 78 NTPDAEGEGCFTITDLYNFRLESDGSAKGPIFNLDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEV-CVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLT------------SIIASKRCNNVQIYNNEVYDGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNTLPQGVCI 495
BLAST of mRNA_H-paniculata_contig3361.8998.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE) HSP 1 Score: 484 bits (1245), Expect = 1.710e-151 Identity = 246/433 (56.81%), Postives = 302/433 (69.75%), Query Frame = 1
Query: 919 YIESGGCGTLTGIYEAY----PNGPLRVLDEDDKVIEGGTPTGYWLLMSSLTVYDGAVFQCHGVSDGGDCDVLRIQSDGSKDFHEVRGHGGSLSFYGTKVTSWDTDSGKQQKTYKGGRSFINCVSEVQSPSADC----AKNDRGECRMDIINSEMGDLGWFDAESYGLTWKVRGFCADLSNPEVFDEVQVYGDIQGSDIYGMYYGMYSYGHEGGVWTNNKMHDNILYGFDPHDDSDDLEIAYNEVWGNGNHGIIASKRCNDVSIHDNEVYSGGPDAVGIFLHRSSDNAVVYNNYVHEMQDAGIAIMESMDGDIYDNVFEDVKYGIRISLGGANNKIHDNVFDTCSSYGLYTYEGSDPPDVS---NGRPSGNVFENNKIYNTEVGAKIKDGDDNEFIGNEF----TGTDYFEFEDSDNTLWSENTIPSGACVDG 2172
YI GGC TLT IY A +GPL VLD +D V+ GG+PTGYWLLM + V +G++ Q HG GGD VLRIQS GS+D++E+RGHGGSLSF TKVTSWDTD K YK RSFI CVSE + D A N GECRMDII SEMG++G+ AESYG++WKVRG+C++ NPEVF+ +V GDI SDIYGMYYG YS+GH+GG+WT NKMHDN YGFDPHDDSD+LEIAYN VWGNGNHGIIASKRCN+V IH N VY GG AVGIFLHRSSD+ V+ N V++M+DAG+AIMESM I+DN F +VKYGIR+S+G A N + +N F C YG+YTY+G+D P+ S +G N F N + E G KI+ + F N F +G +Y FED ++ +W+ N +P C+ G
Sbjct: 401 YIRGGGCATLTDIYTAQGGHNDDGPLFVLDSNDNVV-GGSPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTV---EGGVKIQKAEGIVFTDNNFYEHSSGEEY-RFEDCEDVVWTNNRVPDDICLKG 828
BLAST of mRNA_H-paniculata_contig3361.8998.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI) HSP 1 Score: 475 bits (1223), Expect = 2.840e-148 Identity = 251/447 (56.15%), Postives = 301/447 (67.34%), Query Frame = 1
Query: 898 ASSSNTMYIESGGCGTLTGIYEAYP-NGPLRVLDEDDKVIEGG----TPTGYWLLMSSLTVYDGAVFQCHGVSDGGDCDVLRIQSDGSKDFHEVRGHGGSLSFYGTKVTSWDTDSGKQQKTYKGGRSFINCV-----SEVQSPSADCAKNDRGECRMDIINSEMGDLGWFDAESYGLTWKVRGFCADLSNPEVFDEVQVYGDIQGSDIYGMYYGMYSYGHEGGVWTNNKMHDNILYGFDPHDDSDDLEIAYNEVWGNGNHGIIASKRCNDVSIHDNEVYSGGPDAVGIFLHRSSDNAVVYNNYVHEMQDAGIAIMESMDGDIYDNVFEDVKYGIRISLGGANNKIHDNVFDTCSSYGLYTYEGSDPPDVS--NGRPSGNVFENNKIYNTEVGAKIKDGDDNEFIGNEFTGTDYFEFEDSDNTLWSENTIPSGACVDGSADWATGSDP 2202
++SS++ GGC TLT +Y +GPL VLD + ++ GG +PTGYWLL SSL + DG HG S GGD DVLRIQS DF E+RG GGSLSF T VTSWDTD G+++ Y+GGRSFINCV S++ S S K +RGECRMDII+S MG++GWFDAESYGLTWKVRG C+DLSN E+ D+ VYGDI+GS+IYGMYYGMYSYGH+GGVWT+N M DNILYGFDPHDDSDDL IA N V+GNGNHGIIASKRCN+V I+ A+MES +IYDN E+ KYGIR+SLG A+N IHDN FD+ S+YGLYTY+GSD PDVS +GR N F+ N I NT+V KIK+GDDN F N F FEFEDS +T+W+ N I G C+D S D+A+GS P
Sbjct: 402 STSSDSSSFSGGGCATLTDMYNTQSGSGPLYVLDSSNNIVSGGGGSASPTGYWLLTSSLEILDGVTLYVHGTSAGGDADVLRIQST-DDDFWEIRGWGGSLSFLETTVTSWDTDKGEERTEYEGGRSFINCVTQFDDSDIWSCSGRSNK-ERGECRMDIIDSTMGNMGWFDAESYGLTWKVRGLCSDLSNVEIMDDHNVYGDIKGSEIYGMYYGMYSYGHQGGVWTDNVMRDNILYGFDPHDDSDDLTIAGNTVYGNGNHGIIASKRCNNVEIYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXALMESFRAEIYDNTIENCKYGIRLSLGSADNDIHDNTFDSSSTYGLYTYKGSDDPDVSGNDGRVKDNSFDANTISNTDVAMKIKEGDDNSFTNNVFENVKTFEFEDSTDTVWTNNDI-GGGCLDESTDFASGSIP 843
BLAST of mRNA_H-paniculata_contig3361.8998.1 vs. uniprot
Match: D8LRN0_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRN0_ECTSI) HSP 1 Score: 427 bits (1098), Expect = 4.470e-132 Identity = 259/588 (44.05%), Postives = 321/588 (54.59%), Query Frame = 1
Query: 529 GCFYDR-RSSRLMTDVLSDDSMTPPLCKDHCDGLGAAYYGLQYGRECWCGADGELDRFDEDGPGAKCDYPCVGDKSSICGGYLAMTAY-DIATDATGLIEEEA---PSPTPSGGSGSTKCSGDPTYRWASSS------------NTMYIESGGCGTLTGIYEAYPN-GPLRVLDEDDKVIEGG----TPTGYWLLMSSLTVYDGAVFQCHGVSDGGDCDVLRIQSDGSKDFHEVRGHGGSLSFYGTKVTSWDTDSGKQQKTYKG-GRSFINCVSEVQSPSADCA---KNDRGECRMDIINSEMGDLGWFDAESYGLTWKVRGFCADLSNPEVFDEVQVYGDIQGSDIYGMYYGMYSYGHEGGVWTNNKMHDNILYGFDPHDDSDDLEIAYNEVWGNGNHGIIASKRCNDVSIHDNEVYSGGPDAVGIFLHRSSDNAVVYNNYVHEMQDAGIAIMESMDGDIYDNVFEDVKYGIRISLGGANNKIHDNVFDTCSSYGLYTYEGSDPPDVSNGRPSGNVFENNKIYNTEVGAKIKDGDDNEFIGNEFTGTDYFEFEDSDNTLWSENTIPSGACVDGSADWATGSDPPSKC 2214
GCF D+ RL + V + D MT LC + C G A++GLQ+GRE CG G PG C+G K G ++T D E+ PSPTP S PT S +T Y +SGGC TLT +Y A GPL VLD +D ++G PTG WLL S++ + D A G GGDCDVLRI+S GSK + E+ GHGG++ F GTKVTSWDT GK+++ K GRSFI C+++ + C+ D G CRMDII+S MG++G+ +ESYGLTWKVRG C +LSN ++FD+ VYGDI+ SDIYGMYYGMYSYGHEGGVWTNNKMHDN+ YGFDPHDDSD+L IA+N A +ES D DIYDN + KYGIR+SLG +N I +N FD S YGLYTY+GSD PDVSNGRP GN FE N + NT++G K+GDDN F N FT D FEFE S +T W+ N++ G C+D D+ GSD C
Sbjct: 102 GCFNDKPEPDRLFSYVTTMDDMTTELCANECKGY--AFFGLQWGREAGCGTCGGTGCSQR--PGLTDSDCCIG-KIEESGPLCSVTGKAPCFVDGDSSAPEQTSPVPSPTPKTXXXXXXRSATPTPPTPVPSGCDTKATVQIDKDTAYFKSGGCATLTDLYNAQDGTGPLWVLDSNDNKVDGAGGSAKPTGRWLLTSNIKIEDDATLFVEGKDRGGDCDVLRIESTGSK-YWEIFGHGGNMYFEGTKVTSWDTSKGKEREYKKNEGRSFIRCITQYDD-NYSCSGGSNKDMGTCRMDIIDSTMGNMGYDASESYGLTWKVRGLCKNLSNLKLFDKRNVYGDIKNSDIYGMYYGMYSYGHEGGVWTNNKMHDNVQYGFDPHDDSDNLVIAHNVXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFLESFDADIYDNRIVNCKYGIRLSLGSGDNDITNNTFDNISKYGLYTYKGSDSPDVSNGRPKGNKFEGNTVSNTKIGVLGKEGDDNIFKNNVFTNVDTFEFEKSKDTEWTGNSL-GGGCLDRGKDFTKGSDTIPDC 679
BLAST of mRNA_H-paniculata_contig3361.8998.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI) HSP 1 Score: 399 bits (1024), Expect = 1.450e-125 Identity = 214/407 (52.58%), Postives = 251/407 (61.67%), Query Frame = 1
Query: 994 DEDDKVIEGGTPTGYWLLMSSLTVYDGAVFQCHGVSDGGDCDVLRIQSDGSKDFHEVRGHGGSLSFYGTKVTSWDTDSGKQQKTYKGGRSFINCVSE-VQSPSADC-AKNDRGECRMDIINSEMGDLGWFDAESYGLTWKVRGFCADLSNPEVFDEVQVYGDIQGSDIYGMYYGMYSYGHEGGVWTNNKMHDNILYGFDPHDDSDDLEIAYNEVWGNGNHGIIASKRCNDVSIHDNEVYSGGPDAVGIFLHRSSDNAVVYNNYVHEMQDAGIAIMESMDGDIYDNVFEDVKYGIRISLGGANNKIHDNVFDTCSSYGLYTYEGSDPPDVSNGRPSGNVFENNKIYNTEVGAKIKDGDDNEFIGNEFTGTDYFEFEDSDNTLWSENTIPSGACVDGSADWATGSDPPS 2208
D +K+ + T WLL S L V DGA+F C G +GGDCD LRIQS G D++EVRGHGGS+ F T VTSWDT + K Q+TY+GGRSF+NCVSE + + D AKND GECRMDIINSEMG +G+FDAESYGLTWKVRGFC DLSNP+VF+ VYGDI+ S+I+ MYYGMYSYGH+GGVWTNN+MHDN YGFDPHDDSD L IA ASKRCN+V I++NEV GGP+AVGIFLHRSSDNA VY G D PDVSNGRP+GN F NNKI NT G KIK+ D+ N+FTGT+ EF D+ T WS+N++PSG C+D S PPS
Sbjct: 4 DSGNKITSPTSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVYG-------------------------------------------------------GXXXXXXXDAPDVSNGRPNGNTFNNNKITNTAGGVKIKNSDNIVISNNDFTGTEELEFFDAQATTWSDNSLPSGVCIDNVTSDDGNSVPPS 355
BLAST of mRNA_H-paniculata_contig3361.8998.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 399 bits (1025), Expect = 1.200e-123 Identity = 220/465 (47.31%), Postives = 289/465 (62.15%), Query Frame = 1
Query: 886 TYRWASSSNTMYIES------GGCGTLTGIYEAYPN-GPLRVLDEDDKVIEGGTPTGYWLLMSSLTVYDGAVFQCHGVSDGGDCDVLRIQSDGSKDFHEVRGHGGSLSFYGTKVTSWDTDSGKQQKTYKGGRSFINCVSEVQSPSADC----AKNDRGECRMDIINSEMGDLGWFDAESYGLTWKVRGFCADLSNPEVFDEVQVYGDIQGSDIYGMYYGMYSYGHEGGVWTNNKMHDNILYGFDPHDDSDDLEIAYNEVWGNGNHGIIASKRCNDVSIHDNEVYSGGPDAVGIFLHRSSDNAVVYNNYVHEMQDAGIAIMESMDGDIYDNVFEDVKYGIRISLGGANNKIHDNVFDTCSSYGLYTYEGSDPPDV-SNGRPSGNVFENNKIYNTEVGAKIKDGDDNEFIGNEFTGTD----YFEFEDSDNTLWSENT----------IPSGACVDGSADWATGSDP 2202
+ R+A ++ +Y+ES GGC TL I+E+ PL +D D + T TG WLL L V DG + +G +GGD D LR+ S S+ + +R HGGSL F GTKV SWDT + + GRS+I+ VSE+ + + AKN GE RMDI NSE+G LG+ D+ESYGLTWKVRGFC D SNPE+FD+V VYG++ SDI+ + +G+Y+YGH+ G W NKMHDN YGFDPHDDSD L I NEV+ NG HGIIASKRCN VSI NEVY G + GIFLHRSSD+A+V NYVH+ DAG+A++ES + D+ +N FE+ KYG+R+S+G A+N +N+ S Y YTY GSD PDV S+GR NVF N E KIK+ D +F+ N F D F+D+ N++ NT + + +C DG +D +G +P
Sbjct: 50 SIRYAGTTKRLYLESADGETRGGCATLGQIWESRAGKAPLYAVDPDSGDVSE-TETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLST-SETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESD--SGYEP 510 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3361.8998.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3361.8998.1 >prot_H-paniculata_contig3361.8998.1 ID=prot_H-paniculata_contig3361.8998.1|Name=mRNA_H-paniculata_contig3361.8998.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=635bp MPSAVTNQVDDQIWGEGPDRSCRGKITKRYMLAFGALAGGAALALGLCLGback to top mRNA from alignment at H-paniculata_contig3361:6749..13106+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3361.8998.1 ID=mRNA_H-paniculata_contig3361.8998.1|Name=mRNA_H-paniculata_contig3361.8998.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6358bp|location=Sequence derived from alignment at H-paniculata_contig3361:6749..13106+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3361:6749..13106+ >mRNA_H-paniculata_contig3361.8998.1 ID=mRNA_H-paniculata_contig3361.8998.1|Name=mRNA_H-paniculata_contig3361.8998.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3810bp|location=Sequence derived from alignment at H-paniculata_contig3361:6749..13106+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |