mRNA_H-paniculata_contig3354.8983.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3354.8983.1
Unique NamemRNA_H-paniculata_contig3354.8983.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig3354.8983.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 211 bits (536), Expect = 3.960e-59
Identity = 148/449 (32.96%), Postives = 215/449 (47.88%), Query Frame = 2
Query:   53 ACAATSVLHLHISYIEQSV----------RDDRDAKGEEDRPQPK-KKRRVYARPLYSESAWGRML*S---PDLTDPISRNARRFSRRFRIPHSFFLELVKIVQEGQWFPERGACARGCRRSPNGCREAEKAAELARAWGIRIEALHGLHNMTLGNFKLGNIQLSDKLKILRRGNSFDDIGQLSLMSESTAQSAFHTFCKRFAEDLFHE*VQLPTGDALAATMEA*GAVGFTGAVGSTDVTHITRSCIPVSHTRLYKGKEGFPTLAYEATVDHSGRALWMTKKMTEAVNDKSIVRFDKKVQVVR---------------EGEPYR*RLTSFAISTVWNRWRRVFT*SSTEDITGGGV*CARQKKLQRERNCVE*TS*EHSKGRGMLLRYSQG---PLQVDNVVWKCCILHNMMDSFDGLKLHEPDMDWAGPDGLLDAWLHEDRRMNSVY 1303
            A A T+V    +  +++SV           DD +   E+D    + K+RRVY R  Y++S W + L        TD  +R ARRF   FR+P+ FF+ LV++V++  WFP   +   G +  P                 + ++ L  L                   +IL RGN F DI  +S +S  T  S FH FCK FA +L+ E V LPTG+ L   ME    +GF GAVGSTDVTHI     P +  R+Y GKEG PT+A++ TVDHSGR L +T+  T A NDK+I+R+DK V  +R               +G+ +  +     +   +++WR +   S      G  +   R +  +++  C         KGR  + + + G      +DNV + CCILHNM+ SFD       + +WAG  GL +A    DR  N+ Y
Sbjct:   48 AFATTAVATASLQQLQRSVAVWDVIMEDFEDDLELDTEDDEASREVKRRRVYVRKDYTKSGWWQELMELRETGETDHTTREARRFRNNFRVPYPFFVHLVELVRDRDWFPTGESDVTGRQAVP-----------------VELKVLACL-------------------QILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGIL----KGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNA---ADRDPNTDY 453          
BLAST of mRNA_H-paniculata_contig3354.8983.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 209 bits (532), Expect = 1.080e-58
Identity = 143/411 (34.79%), Postives = 201/411 (48.91%), Query Frame = 2
Query:  116 DRDAKGEEDRPQPKKKRRVYARPLYSESAWGRML*S------PDLTDPISRNARRFSRRFRIPHSFFLELVKIVQEGQWFPERGACARGCRRSPNGCREAEKAAELARAWGIRIEALHGLHNMTLGNFKLGNIQLSDKLKILRRGNSFDDIGQLSLMSESTAQSAFHTFCKRFAEDLFHE*VQLPTGDALAATMEA*GAVGFTGAVGSTDVTHITRSCIPVSHTRLYKGKEGFPTLAYEATVDHSGRALWMTKKMTEAVNDKSIVRFDKKVQVVRE---------------GEPYR*RLTSFAISTVWNRWRRVFT*SSTEDITGGGV*CARQKKLQRERNCVE*TS*EHSKGRGMLLRYS---QGPLQVDNVVWKCCILHNMMDSFDGLKLHEPDMDWAGPDGLLDAWLH 1276
            D D++ EE+  +  K+RRVY R  Y+ S W   L          + DP SR ARRF   FR+P+ FF+ELV +V++  WFP     A G R                   GI ++                 +++   L+IL RGN F DI  +S +S  TA + FH F + FA +++ E + LPTGD     M     +GF+GA GSTDVTHI     P +  R Y GKEG+PT+AY+ TVDH+ R L +T   T + NDKSI+R+D  V  +RE               G PY+ +     +   +++W  +    S   I    +  A  K+L+  R  VE       KGR  +L+ S        +DNV + CCILHNM+ S+D     E + +WAG  GL +AW H
Sbjct:   61 DPDSEEEEEDNREIKRRRVYPRKDYNISGWAIQLQELKDLEVDGIVDPTSRPARRFRESFRLPYPFFVELVALVKQRDWFPTGKQDASGRR-------------------GIPVQ-----------------LKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIP-PSKYPIDQNDL--AFSKRLESVRKDVE-CFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEH 431          
BLAST of mRNA_H-paniculata_contig3354.8983.1 vs. uniprot
Match: A0A6H5JHC3_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHC3_9PHAE)

HSP 1 Score: 189 bits (479), Expect = 2.400e-51
Identity = 136/394 (34.52%), Postives = 185/394 (46.95%), Query Frame = 2
Query:  146 PQPKKKRRVYARPLYSESAWGRML*SPD--LTDPISRNARRFSRRFRIPHSFFLELVKIVQEGQWFPERGACARGCRRSPNGCREAEKAAELARAWGIRIEALHGLHNMTLGNFKLGNIQLSDKLKILRRGNSFDDIGQLSLMSESTAQSAFHTFCKRFAEDLFHE*VQLPTGDALAATMEA*GAVGFTGAVGSTDVTHITRSCIPVSHTRLYKGKEGFPTLAYEATVDHSGRALWMTKKMTEAVNDKSIVRFDKKVQVVR-------------EGEPYR*RLTSFAISTVWNRWRRVFT*SSTEDITGGGV*CARQKKLQRERNCVE*TS*EHSKGRGMLLRYS---QGPLQVDNVVWKCCILHNMMDSFDGLKLHEPDMDWAGPDGLLDAWL 1273
            P  K+KR VY RP Y  SAW  ML   +  L DP +++AR F RRFR+P+  FLELVK ++   W   +G           G R             I +E                       LK+L RGN FDDI QLS +SE T Q  FH F +RFA + F + V+ P G  L   +     VGF G  GS D THI     P S    Y GKEGF T+A+E   DH  R L ++K    A+NDK+IV FD+ V+ ++             +G  +  R     +   +++    F  +  E         A +K+L+  R  +E       KGR  +L+     +G  ++D +   CC LHNM+ S+DGL L E D +WAG DG LD W+
Sbjct:   50 PSAKRKRTVYPRPDYHNSAWAIMLREKEDALADPTTKDARLFRRRFRMPYPIFLELVKEIKSAGW---KGFTTDATDLGGRGTRPC-----------IPVE-----------------------LKVLGRGNFFDDIPQLSFISEQTIQRVFHEFTQRFALEFFPKHVKFPQGAHLEEILREYKDVGFGGCAGSMDCTHIHYQSAPNSGRHSYVGKEGFATVAFEVVCDHKLRCLGVSKAFPGAMNDKTIVMFDEYVRRIKTECKDVPFTLLGEDGSEFEERGLYLIVDGGYHKCPVQFPVTQDE--------LAFRKQLESVRKDIE-CFFGILKGRFRILKMPLLYRGIHKLDCIFQTCCALHNMLHSYDGLSLLEKDCEWAGADGDLDPWV 397          
BLAST of mRNA_H-paniculata_contig3354.8983.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE)

HSP 1 Score: 185 bits (469), Expect = 1.160e-50
Identity = 137/375 (36.53%), Postives = 182/375 (48.53%), Query Frame = 2
Query:   86 ISYIEQSVRDDRDAKGEED--RPQPKKKRRVYARPLYSESAWGRML*SPDLTDPISRNARRFSRRFRIPHSFFLELVKIVQEGQWFPERGACARGCRRSPNGCREAEKAAELARAWGIRIEALHGLHNMTLGNFKLGNIQLSDKLKILRRGNSFDDIGQLSLMSESTAQSAFHTFCKRFAEDLFHE*VQLPTGDALAATMEA*GAVGFTGAVGSTDVTHITRSCIPVSHTRLYKGKEGFPTLAYEATVDHSGRALWMTKKMTEAVNDKSIVRFDKKVQVVREGEPYR*RLTSFAISTVWNRWRRVFT*SSTEDITGGGV*CARQKKLQRERNCVE*TS*EHSKGRGMLLRYSQGPLQ---VDNVVWKCCILHNMM 1195
            +SY + +V  D D++ EE+   P+ K+ RRV  R  +  SAW   L   DL D  +  A+ F  RFR+P+ FF ELVK+ +  +WF            SP      EK A  A   GI +E                       LK+L +GN FDD+ QLS MSES AQ+ FH FC+  A ++F E + LPTG  L   M     +G TGA GSTDVTHI R+  P +  R + GKEGFPT+AYE TVDH+GRAL +T       NDK+ +R+D  V  +R    Y  R           R RR                 A  + L+  R  VE       KGR  +L+      +   +DN+ + CCILHNM+
Sbjct:   36 VSYWD-AVLFDEDSEDEEEVVGPKVKRTRRVTQRRDWRTSAWWEKLQDVDLADHTTAAAKVFRERFRVPYPFFQELVKLSRAKRWF------------SPG-----EKDA--ANREGIPLE-----------------------LKVLGKGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTIRYDSGVNKIRTESQYTEREYKLRKVNGTERTRRGCFLIVDNGYYESNEDTAFSRHLESVRKDVE-CFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNML 366          
BLAST of mRNA_H-paniculata_contig3354.8983.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 8.510e-50
Identity = 112/290 (38.62%), Postives = 148/290 (51.03%), Query Frame = 2
Query:  428 GIRIEALHGLHNMTLGNFKLGNIQLSDKLKILRRGNSFDDIGQLSLMSESTAQSAFHTFCKRFAEDLFHE*VQLPTGDALAATMEA*GAVGFTGAVGSTDVTHITRSCIPVSHTRLYKGKEGFPTLAYEATVDHSGRALWMTKKMTEAVNDKSIVRFDKKVQVVREGEPYR*RLTSFAISTVWNRWRRVFT*SSTEDITGGGV*CARQKKLQRERNCVE*TS*EHSKG-----RGMLLRYSQGPLQ-VDNVVWKCCILHNMMDSFDGLKLHEPDMDWAGPDGLLDAWLHE 1279
            G R+      H     N  +  I+ SD  ++L +GN FDD+ QLS MS+S AQ  FH FC+ FA ++F E + LPTG  L   M     +G+TGA GSTDVTHI  +  P +  R + GKEGFPT+AY+ TVDH GR L +T   T A NDK+I+R+D  V  +R    Y  R      +    R RR                 A  K  QR  +       E  +      R + LR      + VDN+ + CCILHNM+ +FDGL + E + DW G  G  DAW H+
Sbjct:   17 GSRVSVCQQKHQ----NLCIDRIRASDVPQVLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCFRILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWEHD 302          
BLAST of mRNA_H-paniculata_contig3354.8983.1 vs. uniprot
Match: A0A6H5K8I3_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8I3_9PHAE)

HSP 1 Score: 178 bits (451), Expect = 3.280e-47
Identity = 131/427 (30.68%), Postives = 197/427 (46.14%), Query Frame = 2
Query:  152 PKKKRRVYARPLYSESAWGRML*SPDLT-DPISRNARRFSRRFRIPHSFFLELVKIVQEGQW----FPERGACARGCRRSPNGCREAEKAAELARAWGIRIEALHGLHNMTLGNFKLGNIQLSDKLKILRRGNSFDDIGQLSLMSESTAQSAFHTFCKRFAEDLFHE*VQLPTGDALAATMEA*GAVGFTGAVGSTDVTHITRSCIPVSHTRLYKGKEGFPTLAYEATVDHSGRALWMTKKMTEAVNDKSIVRFDKKVQVVR--------------EGEPYR*RLTSFAISTVWNRWRRVFT*SSTEDITGGGV*CARQKKLQRERNCVE*TS*EHSKGRGMLLRYS---QGPLQVDNVVWKCCILHNMMDSFDGLKLHEPDMDWAGPDGLLDAWL-HEDRRMNSVYQ---LWTCSPGVDAARTSLL 1354
            PK++R V  R  Y    W RML   DL  DP +R A++F RRFR+P+ FFL LV  V+ G W      E     RG RR                   I +E                  ++   L+IL RGN FDD+ +++ M E+T    FH F +RFA ++F   V++P  D L   M+    VG +GA+GS D THI  +  P S    + GKEG+ TL +   V H  R L  T+    A NDK+I++FDK    VR              +G   + +     +   ++ W+++ +               + + ++++  C         KGR  + +     +   ++DN+ + C ILHNM+ ++DG++L EPD DWAG DG LD  + H   RM++      +  C  G DA R  L+
Sbjct:   49 PKRRRTVRPRADYRTLPWARMLEKADLLQDPSTREAKQFRRRFRVPYPFFLSLVDEVKAGNWPGFTTDEFELGGRGTRRC------------------IPVET-----------------KVLAVLRILGRGNYFDDVSEVTGMGEATVNHMFHKFTERFACEIFPVWVRMPNEDELKDIMKTYDEVGMSGAMGSMDGTHIEWTLCPYSQRSSHIGKEGYATLVFNVAVSHDMRVLSCTRGFPGAQNDKTIIKFDKFAMAVRNGWYKDVEYTLKGEDGADIKEKGPWLIVDGGYHNWKQLQSPIRAPSNKAESGFKRQLESVRKDSECCFGVV----KGRFRICKMQFLYRKKERIDNIFFTCIILHNMLLAYDGIELLEPDCDWAGADGDLDKNIEHPVVRMSAPTHEDAVVECDDGFDALRQKLV 436          
BLAST of mRNA_H-paniculata_contig3354.8983.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 8.720e-47
Identity = 107/282 (37.94%), Postives = 149/282 (52.84%), Query Frame = 2
Query:  512 LKILRRGNSFDDIGQLSLMSESTAQSAFHTFCKRFAEDLFHE*VQLPTGDALAATMEA*GAVGFTGAVGSTDVTHITRSCIPVSHTRLYKGKEGFPTLAYEATVDHSGRALWMTKKMTEAVNDKSIVRFDKKVQVVR---------------EGEPYR*RLTSFAISTVWNRWRRVFT*SSTEDITGGGV*CARQKKLQRERNCVE*TS*EHSKGRGMLLRYSQG---PLQVDNVVWKCCILHNMMDSFDGLKLHEPDMDWAGPDGLLDAWLHEDRRMNSVY 1303
            L+IL RGN F DI  +S +S  T  S FH FCK FA +L+ E V LPTG+ L   ME    +GF GAVGSTDVTHI     P +  R+Y GKEG PT+A++ TVDHSGR L +T+  T A NDK+I+R+DK V  +R               +G+ +  +     +   +++WR +   S      G  +   R +  +++  C         KGR  + + + G      +DNV + CCILHNM+ SFD       + +WAG  GL +A    DR  N+ Y
Sbjct:   88 LQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGIL----KGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNA---ADRDPNTDY 362          
BLAST of mRNA_H-paniculata_contig3354.8983.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE)

HSP 1 Score: 174 bits (441), Expect = 5.020e-46
Identity = 129/400 (32.25%), Postives = 177/400 (44.25%), Query Frame = 2
Query:  164 RRVYARPLYSESAWGRML*SPDLTD------PISRNARRFSRRFRIPHSFFLELVKIVQEGQWFPERGACARGCRRSPNGCREAEKAAELARAWGIRIEALHGLHNMTLGNFKLGNIQLSDKLKILRRGNSFDDIGQLSLMSESTAQSAFHTFCKRFAEDLFHE*VQLPTGDALAATMEA*GAVGFTGAVGSTDVTHITRSCIPVSHTRLYKGKEGFPTLAYEATVDHSGRALWMTKKMTEAVNDKSIVRFDKKVQVVREGEPYR*RLTSFAISTVWNRWRRVF--T*SSTEDITGG------------GV*C--------ARQKKLQRERNCVE*TS*EHSKGRGMLLRYSQGPL-----QVDNVVWKCCILHNMMDSFDGLKLHEPDMDWAGPDGLLD 1264
            R    RP YS SAWG  L + +         P SR A+ F   FR+PH FF   V +V+       R    R C                     + +E                 +++   L++L RGN F D+ QLSLMS  TA+ +FH FC  F+  L+H+ V LP G+ L       G +G  GAV S D THI+    P S T  +KGKEG+ TL YEA+ DHSGR L  TK    A NDK++V+ D  V  +RE EP             W  ++ V      +T + TGG             + C        A+Q+  +R  +  +       + +G    +  G L     ++DN  +  CI+HNM+  FDGL   E D+DWAG DG  D
Sbjct:   33 RETRERPDYSSSAWGVRLANLESLRIAGRLVPSSREAKAFRSDFRVPHEFFRHFVDLVRTVFPTATRDVAGRQC---------------------VPLE-----------------LKVLGVLQVLGRGNCFADVAQLSLMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMGCPGAVASVDCTHISWPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEP-------------WASYKFVLFDLEGNTTEHTGGWLIVDGGYHRVPSLICPFKEYASEAQQEWSKRFESIRKDIECLFGRLKGRFRLFKTGILFGTREKIDNAWFTACIIHNMLHQFDGLANLEKDVDWAGKDGEAD 381          
BLAST of mRNA_H-paniculata_contig3354.8983.1 vs. uniprot
Match: A0A6H5KLF8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLF8_9PHAE)

HSP 1 Score: 174 bits (440), Expect = 5.510e-46
Identity = 132/419 (31.50%), Postives = 192/419 (45.82%), Query Frame = 2
Query:  110 RDDRDAKGEEDRPQPKKKRRVYARPLYSESAWGRML*SPDLT-DPISRNARRFSRRFRIPHSFFLELVKIVQEGQW----FPERGACARGCRRSPNGCREAEKAAELARAWGIRIEALHGLHNMTLGNFKLGNIQLSDKLKILRRGNSFDDIGQLSLMSESTAQSAFHTFCKRFAEDLFHE*VQLPTGDALAATMEA*GAVGFTGAVGSTDVTHITRSCIPVSHTRLYKGKEGFPTLAYEATVDHSGRALWMTKKMTEAVNDKSIVRFDKKVQVVR--------------EGEPYR*RLTSFAISTVWNRWRRVFT*SSTEDITGGGV*CARQKKLQRERNCVE*TS*EHSKGRGMLLRYS---QGPLQVDNVVWKCCILHNMMDSFDGLKLHEPDMDWAGPDGLLDAWL-HEDRRMNS 1297
            R++ D   EE  P+PK +R V  R       W RML   DL  DP +R A++F RRFR+P+ FFL LV  V+ G+W      E     RG RR                   I +E                     D L+IL RGN FDD+ +++ M E+T    FH F  RFA + F   V++P  D L   M+    VG TGA+GS D TH+  +  P S    + GKEG+ TL Y   V H  R L  T+    A NDK+IV+FDK    VR              +G   + +     +   ++ W+++ +               + + ++++  C         KGR  + +     +   ++DN  + C ILHNM+ ++DG++L EP  DWAG DG LD  + H D RM++
Sbjct:    3 REEEDGCDEE--PRPKCRRTVRPRADDRALPWARMLEKADLLQDPSTREAKQFRRRFRVPYPFFLSLVDGVKAGKWPGFTTNEFELGGRGTRRC------------------IPVEI--------------------DVLRILGRGNYFDDVSEVTGMGEATVNQLFHKFTGRFAREFFPVWVRMPNEDELKEIMKTYDEVGMTGAMGSMDGTHLQWTVCPYSERSSHVGKEGYATLVYNVAVSHDMRVLSCTRGFPGAQNDKTIVKFDKFATEVRNGWYKDVEYTLKGEDGGDIKEKGPWLIVGGGYHNWKQLQSPIRVPSTKAESGFKRQLEGVRKDSECCFGVV----KGRFRICKMQFLYRKKERIDNTFFTCMILHNMLLAYDGIELLEPYCDWAGADGDLDEDIVHPDVRMSA 377          
BLAST of mRNA_H-paniculata_contig3354.8983.1 vs. uniprot
Match: A0A6H5JCU6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCU6_9PHAE)

HSP 1 Score: 173 bits (439), Expect = 1.680e-45
Identity = 122/343 (35.57%), Postives = 160/343 (46.65%), Query Frame = 2
Query:  131 GEEDRPQPKKKRRVYARPLYSESAWGRML*SPDLTDPISRNARRFSRRFRIPHSFFLELVKIVQEGQWFPERGACARGCRRSPN----------------GCREAEKAAELA-------RAWGIRIE------ALHG-------------------------------------LHNM-TLGN-------FKLGNIQLSDKLKILRRGNSFDDIGQLSLMSESTAQSAFHTFCKRFAEDLFHE*VQLPTGDALAATMEA*GAVGFTGAVGSTDVTHITRSCIPVSHTRLYKGKEGFPTLAYEATVDHSGRALWMTKKMTEAVNDKSIVRFDKKVQVVREGEPY 937
            GE+D P  K+ R+V  R  +S SAW   L + DL D  +  A+ F  RFR+PH+FFLELVK+ +  +WF  R   A G R  P                  C +      +          W  R+       A HG                                     LH   T G+       F   + ++   L+IL RGN FDDI QLSLMS+  A + FH FCK FA++LF E + LPTG      M     +G TGA+GSTDVTHI     P +  R Y GKEGFPT+AY+ TVDH+GRA+ +T   T A NDK+I+R+D  V  ++    Y
Sbjct:   54 GEQDGPPVKRSRQVKERRDWSTSAWWLQLQNADLLDHTTEAAKVFRTRFRVPHAFFLELVKMARGKKWFSVREKDAVGRRGIPIELKLSSYRSGLLLLVVNCSDVPSIEPMRWIVVHNFTRWYRRVHSSTAVVAEHGSMGNVPCTVTRTSHRWHRKYCCRRPTAREKRRTLWFRLHTFQTRGHLRGHATTFDAASTKILTALQILGRGNCFDDICQLSLMSKPMAAATFHKFCKHFAQELFEEHIYLPTGSYQDEVMCMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIIRYDAGVHTIKTDAQY 396          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3354.8983.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JPH7_9PHAE3.960e-5932.96Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JAU4_9PHAE1.080e-5834.79Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHC3_9PHAE2.400e-5134.52DDE Tnp4 domain-containing protein n=2 Tax=Ectocar... [more]
A0A6H5KSI7_9PHAE1.160e-5036.53DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5K796_9PHAE8.510e-5038.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8I3_9PHAE3.280e-4730.68Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY50_9PHAE8.720e-4737.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JV45_9PHAE5.020e-4632.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLF8_9PHAE5.510e-4631.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCU6_9PHAE1.680e-4535.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3354contigH-paniculata_contig3354:15257..18268 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons4
Model size1359
Cds size240
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3354.8983.1prot_H-paniculata_contig3354.8983.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3354 18029..18268 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930035.892256-UTR-H-paniculata_contig3354:15256..156571622930035.892256-UTR-H-paniculata_contig3354:15256..15657Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3354 15257..15657 +
1691481120.067931-UTR-H-paniculata_contig3354:15256..156571691481120.067931-UTR-H-paniculata_contig3354:15256..15657Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3354 15257..15657 +
1622930035.9066918-UTR-H-paniculata_contig3354:16069..161851622930035.9066918-UTR-H-paniculata_contig3354:16069..16185Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3354 16070..16185 +
1691481120.0769167-UTR-H-paniculata_contig3354:16069..161851691481120.0769167-UTR-H-paniculata_contig3354:16069..16185Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3354 16070..16185 +
1622930035.9228816-UTR-H-paniculata_contig3354:16852..173611622930035.9228816-UTR-H-paniculata_contig3354:16852..17361Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3354 16853..17361 +
1691481120.084794-UTR-H-paniculata_contig3354:16852..173611691481120.084794-UTR-H-paniculata_contig3354:16852..17361Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3354 16853..17361 +
1622930035.9494529-UTR-H-paniculata_contig3354:17937..180281622930035.9494529-UTR-H-paniculata_contig3354:17937..18028Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3354 17938..18028 +
1691481120.092225-UTR-H-paniculata_contig3354:17937..180281691481120.092225-UTR-H-paniculata_contig3354:17937..18028Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3354 17938..18028 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930035.980454-CDS-H-paniculata_contig3354:18028..182681622930035.980454-CDS-H-paniculata_contig3354:18028..18268Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3354 18029..18268 +
1691481120.0998075-CDS-H-paniculata_contig3354:18028..182681691481120.0998075-CDS-H-paniculata_contig3354:18028..18268Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3354 18029..18268 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3354.8983.1

>prot_H-paniculata_contig3354.8983.1 ID=prot_H-paniculata_contig3354.8983.1|Name=mRNA_H-paniculata_contig3354.8983.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=80bp
MLLRYSQGPLQVDNVVWKCCILHNMMDSFDGLKLHEPDMDWAGPDGLLDA
WLHEDRRMNSVYQLWTCSPGVDAARTSLLH
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mRNA from alignment at H-paniculata_contig3354:15257..18268+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3354.8983.1 ID=mRNA_H-paniculata_contig3354.8983.1|Name=mRNA_H-paniculata_contig3354.8983.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3012bp|location=Sequence derived from alignment at H-paniculata_contig3354:15257..18268+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAAACATGTCTACATTTCCTTTAATAGTTCTACAGTTCTTATGGGGGTAA AAGCTTGTGCAGCGACATCAGTGTTGCATTTGCATATCTCGTATATTGAG CAATCTGTGCGCGATGATCGTGATGCGAAAGGTGAAGAAGATAGGCCACA ACCAAAGAAGAAGAGGAGGGTGTATGCTCGGCCGCTGTACAGTGAATCGG CGTGGGGAAGGATGCTGTAGTCCCCCGATCTCACGGACCCCATTTCGAGA AACGCCCGCCGCTTCAGCAGGCGCTTTCGTATACCCCATTCTTTCTTTCT GGAGCTTGTGAAGATCGTGCAAGAAGGACAATGGTTTCCGGAGAGAGGGG CATGTGCACGTGGATGTCGCCGGTCACCGAATGGTTGTCGTGAAGCTGAA AGTAAGCAGCACGACAACAGGCGATCTCGTGACCAGCGTTTCACGCTTGT TGTGCTTAATCATGCCTGAATAGCGTTGTTCGTGGCATCCAATTTCCCTC AGTTTGTTTGCTGTTGTATTGAAATGCTGTCTCACTCTTGGTGTCTGCCT CAGTTGTGCTTGACTGTATAGATGGTAAGATCTTTGTCAGTCACTGTGCA TGACAGAACTCGTCCTCCAATTTACATTTCAGTAGAACTGTGATGATGCG AAGCTAACTTGTATTGTACATTACTGTAGTGCCTGGCCTCATTCCTGCCC GTATAATCCGTGGTCCTCGAACATACCTGCGAAGCTGTAGTATATTGAAT AATATGACGGTGACTAATACAATAACCCTGTTTTTAACGATATTTTTCGT CATATTCCACCAGAGGCTGCCGAATTAGCCAGAGCGTGGGGGATACGAAT TGAAGCACTGCACGGTCTCCACAACATGACGTTGGGAAATTTCAAATTGG GCAACATTCAGTTATCCGACAAGTTGAAGGTACTAGTTCAAAAAGCGTGG TGTTCAGTAGTGGCCATTGTAAGTACTGTGTTGTTTCTTTTTTCTTGTCG GTAAGGTGTGCTACCCCCACCTGTCGAGAATCTCTATCTCGTCATTTGCT TTGTTGGGCAAAGGATATCCAGACCGCCCAATCAACGCGGTGGGCAACCT TTAGCATGACGCGCGATGCGATACAGGATCTTCCTAATCGTATTTTGTTT GATGTTGCTGTGGGTGCATTAGATGTTTTAGTTTATTGGTACGTTCGATG GGTTACCCTGTTCAATATCCCTCTTGTTGTGGTCCTTGACTCTCACGAGG TTACGTTGTCAGAGAGTGAAATACAAATTGTACGCAATGGTGACACACCG CGAAAGAATATGCCAGGATGACATTCGCGGTGGATTCGCTTCCGTAGGGT TGTCTTAGTTTCATTAGAACAGTGCCACTTTGCCGATGAGGGCGATTGGT CTTCGATAAGCCGGGGTGCGTCGTTGCAAGTATTCATTTCAGTGAGGCCA TCGCACTGGGAACATGAACGTCGTCAATCAATTTTCTCCTTAATAATGTT TTGCTATCCCAGCCGCCCTCAGTATGGTCAAGTGCTTCATGCGATGCCGT CACCCCTTCCGTCGCGGCTGTAATGTATGTTCTGGCGAGCTTGCAGATTC TGCGAAGAGGGAATAGCTTCGATGATATCGGCCAACTCTCCTTGATGAGC GAGTCGACTGCCCAAAGTGCATTCCACACATTTTGCAAGCGTTTCGCTGA AGATCTTTTTCATGAATAAGTTCAACTCCCTACTGGGGATGCCCTCGCAG CCACGATGGAGGCGTAAGGTGCAGTGGGCTTCACCGGGGCAGTAGGCTCG ACTGATGTCACTCACATCACAAGGAGTTGCATCCCGGTATCACATACCCG TCTCTACAAGGGCAAGGAAGGGTTCCCGACTCTCGCATACGAGGCAACGG TAGACCACTCGGGGCGGGCACTTTGGATGACGAAGAAAATGACCGAAGCA GTGAACGACAAATCCATCGTTCGTTTCGACAAGAAAGTACAAGTGGTCAG GGAGGGTGAGCCGTACAGGTAACGGCTTACAAGCTTCGCGATAAGCACGG TGTGGAACAGGTGGAGAAGAGTGTTTACCTGATCGTCGACGGAGGATATC ACCGGGTGAGTCAACTGCTGTTGTTTGATGGTTATTGCTGATGCACCACC GTACGGAAATGCGTTGTATAGTTTAACGTTATGCGGCGATTATTTCTTCG TTTCTGACAAGCATATCCCATTTAGTGTTGTGTATTGATCACACCCCACC TACGATGTACAACTTTGTTGATCTCAAACGTAAATGATTGCCCGAGGTCC CACTTTGTGAGCCGCAACTCTAGACTCGCCGGACATTCGTTTCAAATATT ACCACCAGATGAGGTGCAAACTAGGAGACGGCAAGCTTCCTTGACATCAG CGGCAGCTACGCGAAATCTCTAGGTTGCGCCATGTAGCGCATCTTGTTTA AAGCACAGGCCATACCACCGTTGACAAGGATTTTGCTTGGATGATAAGAC GCTTCTGTGTTGAATGTCTTCTTCAGCTTCAATTTTCTCCATACCGCTGA TTGATCATTGATCAAGGCTGAGAAAAATCGTAAGAGCTGGCTGTTTCAGT ATCTGACGCGGTTGGCCAGCTGCCCCATAAGAACAACGTGTATCGATACC ACTGTTTTCTCGTTTCCCCTCTTATTTGCAGTGGAGGAGTCTAGTGTGCC CGGCAAAAGAAGCTGCAACGCGAGAGGAATTGCGTAGAGTAAACCTCTTG AGAGCATTCGAAAGGACGTGGGATGCTTCTTCGGTATTCTCAAGGGCCGC TTCAGGTAGACAATGTGGTCTGGAAATGTTGTATCCTTCACAACATGATG GATTCGTTCGACGGACTGAAGTTGCACGAGCCGGATATGGACTGGGCCGG GCCGGATGGCCTCCTTGACGCGTGGCTTCACGAAGATCGCAGAATGAACT CTGTATACCAACTGTGGACTTGCAGTCCCGGAGTCGATGCCGCGAGGACT TCTCTCTTGCAC
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Coding sequence (CDS) from alignment at H-paniculata_contig3354:15257..18268+

>mRNA_H-paniculata_contig3354.8983.1 ID=mRNA_H-paniculata_contig3354.8983.1|Name=mRNA_H-paniculata_contig3354.8983.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=480bp|location=Sequence derived from alignment at H-paniculata_contig3354:15257..18268+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTTCTTCGGTATTCTCAAGGGCCGCTTCAGGTAGACAATGTGGTCTG
GAAATGTTGTATCCTTCACAACATGATGGATTCGTTCGACGGACTGAAGT
TGCACGAGCCGGATATGGACTGGGCCGGGCCGGATGGCCTCCTTGACGCG
TGGCTTCACGAAGATCGCAGAATGAACTCTGTATACCAACTGTGGACTTG
CAGTCCCGGAGTCGATGCCGCGAGGACTTCTCTCTTGCACATGCTTCTTC
GGTATTCTCAAGGGCCGCTTCAGGTAGACAATGTGGTCTGGAAATGTTGT
ATCCTTCACAACATGATGGATTCGTTCGACGGACTGAAGTTGCACGAGCC
GGATATGGACTGGGCCGGGCCGGATGGCCTCCTTGACGCGTGGCTTCACG
AAGATCGCAGAATGAACTCTGTATACCAACTGTGGACTTGCAGTCCCGGA
GTCGATGCCGCGAGGACTTCTCTCTTGCAC
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