mRNA_H-paniculata_contig3347.8964.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3347.8964.1
Unique NamemRNA_H-paniculata_contig3347.8964.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig3347.8964.1 vs. uniprot
Match: D8LIK0_ECTSI (2OG-FeII_Oxy_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIK0_ECTSI)

HSP 1 Score: 350 bits (899), Expect = 3.010e-113
Identity = 224/427 (52.46%), Postives = 267/427 (62.53%), Query Frame = 2 
Query:  191 ISSTALDFQEMMRKERALVLKNQGEKAVADLAGRDAS--SRMRYLSKRRPRLDLHRNHRVE----NNEVDGIYYVPEFVTAEEGKRLQAAAREREGRGA------EWKDLFKRRLQIHGGTPHPSGMVEDELPGFLREVCAALVEAGVFEESSPPNHVLLNEYSEGQGIGPHKDGPLYEGRVAILSLGKEAFLDFWRSLEDAKADCSEAEMAAA------AVP-SAAAVADARVSDVKQS---------------------ASTRAVASVQCQDCSLVVFEGQAYYDLWHGIASTVTTTTRGVVGDASGLNQINGERGSVSCSNRSDVMGDNSIRREDGALRNQEGRHDCR-AIPGAVSAGGHENGDRGAGGADDRSGRSSANKRLSFTIRRVAKIVSADSVVEHAEARSERERRRKFFERSVTETG 1348
            ++STALDF+EMMRKER L +K         LA   +S  +R RY+SKRR RLDL RNHRV        +DGI+YVP FVT EEG+ L+ AAR  +G         EWKDL+KRRLQIHGGTPHPSGMVE+ELP FL+EVC ALVEAGVF ESSPPNHVLLNEYS+GQGIGPHKDGPLYEGRVAILSLGKEAFLDFW SLEDAKADC++    A       AVP S  A  DA  S  + +                     A+ RA+ SV+C+ CSLVVFEG+AY + WHGIAST            SG   ++    +      ++V    +I   D  +   +G  +   +  G V  G         GG  +     +A KRLSFTIRRVA++V ADSV+EH+EARSE ERRR+ FERSVTETG
Sbjct:    1 MASTALDFREMMRKERELAMKK--------LAATPSSPKARHRYMSKRRTRLDLKRNHRVSAEGAERGIDGIFYVPGFVTEEEGRGLELAARSGDGXXXXXXXXXEWKDLYKRRLQIHGGTPHPSGMVEEELPAFLQEVCDALVEAGVFPESSPPNHVLLNEYSDGQGIGPHKDGPLYEGRVAILSLGKEAFLDFWGSLEDAKADCADIAAGATSGRAICAVPVSGLAAGDAFTSSSEDNSVFTDESATDDADGRAHQRRRAAKRALVSVKCEHCSLVVFEGKAYREAWHGIASTA----------GSGAT-MSATEAAPPARTEAEVATSGNISTIDDCVAAPQGADEVAPSFSGTVKGGD-------LGGVGE-----AAQKRLSFTIRRVARVVPADSVMEHSEARSEMERRRRGFERSVTETG 396
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BLAST of mRNA_H-paniculata_contig3347.8964.1 vs. uniprot
Match: L1II63_GUITC (Fe2OG dioxygenase domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1II63_GUITC)

HSP 1 Score: 151 bits (381), Expect = 1.050e-38
Identity = 89/189 (47.09%), Postives = 104/189 (55.03%), Query Frame = 2 
Query:  386 IYYVPEFVTAEEGKRLQAAAREREGRGAE--WKDLFKRRLQIHGGTPHPSGMVEDELPGFLREVCAALVEAGVFEESSPPNHVLLNEYSEGQGIGPHKDGPLYEGRVAILSLGKEAFLDFWRSLEDAKADCSEAEMAAAAVPSAAAVADARVSDVKQSASTRAVASVQCQDCSLVVFEGQAYYDLWHGI 946
            ++Y+P F+T EEG    AA   R     E  W +L +RRLQ HGGTPHP GM+  E+P F+  V  ALV+AGVF+E   PNHVLLNEY+ GQGI PH+DGPLY   VAILSL   A L FW SL   K  C EA                             VASV C   SL+VF  +AY   WHGI
Sbjct:   14 LFYIPNFLTEEEG----AAILRRVSMMPESSWANLKRRRLQNHGGTPHPDGMIPSEVPQFIHAVMDALVQAGVFKEEERPNHVLLNEYARGQGIAPHQDGPLYMPLVAILSLDGPALLQFWPSLHATK--CGEA-----------------------------VASVLCLSNSLLVFNEEAYESHWHGI 167
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BLAST of mRNA_H-paniculata_contig3347.8964.1 vs. uniprot
Match: A0A7S4KT72_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KT72_GUITH)

HSP 1 Score: 151 bits (381), Expect = 5.920e-38
Identity = 89/189 (47.09%), Postives = 104/189 (55.03%), Query Frame = 2 
Query:  386 IYYVPEFVTAEEGKRLQAAAREREGRGAE--WKDLFKRRLQIHGGTPHPSGMVEDELPGFLREVCAALVEAGVFEESSPPNHVLLNEYSEGQGIGPHKDGPLYEGRVAILSLGKEAFLDFWRSLEDAKADCSEAEMAAAAVPSAAAVADARVSDVKQSASTRAVASVQCQDCSLVVFEGQAYYDLWHGI 946
            ++Y+P F+T EEG    AA   R     E  W +L +RRLQ HGGTPHP GM+  E+P F+  V  ALV+AGVF+E   PNHVLLNEY+ GQGI PH+DGPLY   VAILSL   A L FW SL   K  C EA                             VASV C   SL+VF  +AY   WHGI
Sbjct:   84 LFYIPNFLTEEEG----AAILRRVSMMPESSWANLKRRRLQNHGGTPHPDGMIPSEVPQFIHAVMDALVQAGVFKEEERPNHVLLNEYARGQGIAPHQDGPLYMPLVAILSLDGPALLQFWPSLHATK--CGEA-----------------------------VASVLCLSNSLLVFNEEAYESHWHGI 237
[Close]
BLAST of mRNA_H-paniculata_contig3347.8964.1 vs. uniprot
Match: A0A7S1H8U6_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H8U6_HEMAN)

HSP 1 Score: 138 bits (348), Expect = 4.730e-35
Identity = 75/158 (47.47%), Postives = 90/158 (56.96%), Query Frame = 2 
Query:  473 WKDLFKRRLQIHGGTPHPSGMVEDELPGFLREVCAALVEAGVFEESSPPNHVLLNEYSEGQGIGPHKDGPLYEGRVAILSLGKEAFLDFWRSLEDAKADCSEAEMAAAAVPSAAAVADARVSDVKQSASTRAVASVQCQDCSLVVFEGQAYYDLWHGI 946
            W +L +RRLQ HGGTPHP GM  + +P F+  +  A+VEAGVF+  +PPNHVLLNEY  GQGI  HKDGPLY   VAILSLG  A L+FW SL D + + +E                               ASV CQ  SL+VF G AY   +HGI
Sbjct:    6 WTNLKRRRLQNHGGTPHPEGMQPESVPKFIGSLMDAMVEAGVFQRDAPPNHVLLNEYRCGQGIMAHKDGPLYMPWVAILSLGSPAMLEFWASLSDTREEGAEP-----------------------------AASVLCQPRSLLVFSGDAYDRHFHGI 134
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BLAST of mRNA_H-paniculata_contig3347.8964.1 vs. uniprot
Match: A0A7S1GBR1_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GBR1_9STRA)

HSP 1 Score: 140 bits (353), Expect = 1.090e-33
Identity = 87/190 (45.79%), Postives = 98/190 (51.58%), Query Frame = 2 
Query:  377 VDGIYYVPEFVTAEEGKRLQAAAREREGRGAEWKDLFKRRLQIHGGTPHPSGMVEDELPGFLREVCAALVEAGVFEESSPPNHVLLNEYSEGQGIGPHKDGPLYEGRVAILSLGKEAFLDFWRSLEDAKADCSEAEMAAAAVPSAAAVADARVSDVKQSASTRAVASVQCQDCSLVVFEGQAYYDLWHGI 946
            +  + Y P+FVT EE   L A+        A W  L KRRLQ++GGTP   GM    LP F+     ALVEAGVF   +PPNHVLLNEY  GQGI PHKDGPLY   VAILSL     LDFW SLE      S  E  A                         VASV C+  SL+VF   AY D+WH I
Sbjct:  110 LPSVAYYPDFVTPEEEGELLASTYLA---AAPWHPLRKRRLQMYGGTPAAEGMRAQPLPPFMHACARALVEAGVFAADAPPNHVLLNEYEPGQGIMPHKDGPLYHPVVAILSLRSSCCLDFWPSLE-----ASSREGGAP------------------------VASVLCRPRSLLVFREAAYTDVWHSI 267
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BLAST of mRNA_H-paniculata_contig3347.8964.1 vs. uniprot
Match: UPI001BB26015 (alpha-ketoglutarate-dependent dioxygenase alkB homolog 6-like isoform X1 n=2 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB26015)

HSP 1 Score: 117 bits (293), Expect = 2.430e-26
Identity = 73/199 (36.68%), Postives = 100/199 (50.25%), Query Frame = 2 
Query:  371 NEVDGIYYVPEFVTAEEGKRL--QAAAREREGRGAEWKDLFKRRLQIHGGTPHPSGMVEDELPGFLREVCAALVEAGVFEESSPPNHVLLNEYSEGQGIGPHKDGPLYEGRVAILSLGKEAFLDFWRSLEDAKADCSEAEMAAAAVPSAAAVADARVSDVKQSASTRAVASVQCQDCSLVVFEGQAYYDLWHGIASTVT 961
            N  + +YY+P FVT EEGK L  Q     +     +W  L  RRLQ  GG PHP GM+ +ELP +L      +   GVF +  P NHVL+NEY  GQGI PH+DGPL+   V+ +SLG   FL+F++  E    D  ++              D  +     S  +    S+  + CSL++ +   Y D  HGIA   T
Sbjct:   20 NAPNMVYYIPNFVTEEEGKYLLNQVYTAPK----PKWTQLSNRRLQNWGGLPHPKGMIAEELPKWLDVYANKIAGLGVFGDHIP-NHVLVNEYQSGQGIMPHEDGPLFYPVVSTISLGSHTFLEFYKKREMNNGDLQQSS-------------DEGIQS--NSDFSEPCFSLLLEPCSLLILQDSMYTDHLHGIAERTT 198
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BLAST of mRNA_H-paniculata_contig3347.8964.1 vs. uniprot
Match: A0A7M7RD49_STRPU (Fe2OG dioxygenase domain-containing protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7RD49_STRPU)

HSP 1 Score: 115 bits (287), Expect = 1.640e-25
Identity = 62/135 (45.93%), Postives = 79/135 (58.52%), Query Frame = 2 
Query:  371 NEVDGIYYVPEFVTAEEGKRL--QAAAREREGRGAEWKDLFKRRLQIHGGTPHPSGMVEDELPGFLREVCAALVEAGVFEESSPPNHVLLNEYSEGQGIGPHKDGPLYEGRVAILSLGKEAFLDFWRSLEDAKAD 769
            N  D  YY+P+FVT +EGK L  Q  A  +     +W  L  RRLQ  GG PHP GM+ + LP +L      +   GVF +  P NHVL+NEY  GQGI PH+DGPL+   V  +SLG   FLDF++  E+  AD
Sbjct:   20 NAPDVAYYIPDFVTEQEGKYLLNQVYAAPK----PKWTHLSNRRLQNWGGLPHPKGMIAEGLPKWLDVYAKKIARLGVFGDHIP-NHVLVNEYQPGQGIMPHEDGPLFHPVVTTISLGSHTFLDFYKRREENDAD 149
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BLAST of mRNA_H-paniculata_contig3347.8964.1 vs. uniprot
Match: A0A087UC78_STEMI (Putative alpha-ketoglutarate-dependent dioxygenase ABH6 (Fragment) n=2 Tax=Stegodyphus TaxID=175340 RepID=A0A087UC78_STEMI)

HSP 1 Score: 113 bits (283), Expect = 3.030e-25
Identity = 66/190 (34.74%), Postives = 97/190 (51.05%), Query Frame = 2 
Query:  380 DGIYYVPEFVT-AEEGKRLQAAAREREGRGAEWKDLFKRRLQIHGGTPHPSGMVEDELPGFLREVCAALVEAGVFEESSPPNHVLLNEYSEGQGIGPHKDGPLYEGRVAILSLGKEAFLDFWRSLEDAKADCSEAEMAAAAVPSAAAVADARVSDVKQSASTRAVASVQCQDCSLVVFEGQAYYDLWHGI 946
            D  YY+P F+T AEE   L+      + +   WK L  RRLQ  GG PHP GM+E+ELP +L++    + +  +FE+  P NHVL+NEY  GQGI PH+DGPL+   +A ++LG    LD++  +   +   +E E                         +  V S+  + CSL+V +   Y+   HGI
Sbjct:   14 DSAYYIPHFITPAEESYLLEKVYASPKPK---WKILSNRRLQNWGGLPHPKGMIEEELPEWLKDYTKKVKDLDIFEDKVP-NHVLVNEYLPGQGIMPHEDGPLFYPTIATINLGSHTILDYYEKINVLEHSKTETE-------------------------SNYVGSLLLERCSLLVVQHDLYHKYLHGI 174
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BLAST of mRNA_H-paniculata_contig3347.8964.1 vs. uniprot
Match: A0A4Z2G3Q3_9TELE (Alpha-ketoglutarate-dependent dioxygenase alkB 6 n=3 Tax=Cottales TaxID=1490021 RepID=A0A4Z2G3Q3_9TELE)

HSP 1 Score: 113 bits (283), Expect = 4.490e-25
Identity = 66/187 (35.29%), Postives = 92/187 (49.20%), Query Frame = 2 
Query:  386 IYYVPEFVTAEEGKRLQAAAREREGRGAEWKDLFKRRLQIHGGTPHPSGMVEDELPGFLREVCAALVEAGVFEESSPPNHVLLNEYSEGQGIGPHKDGPLYEGRVAILSLGKEAFLDFWRSLEDAKADCSEAEMAAAAVPSAAAVADARVSDVKQSASTRAVASVQCQDCSLVVFEGQAYYDLWHGI 946
            +YY+P+F++ +E   LQ    +      +W  L  RRLQ  GG PHP GM+ +E+P +LR  C  +   G F   S  NHVL+NEY EG+GI PH+DGPLY   V  +SLG    LDF+  +                        D R     Q+   R V S+  +  SL++ + + Y  L HGI
Sbjct:   23 VYYIPDFISEDEESYLQQQVYK--SPRTKWTQLSGRRLQNWGGLPHPRGMLAEEMPDWLRTYCEKISSLGAFGGKSA-NHVLVNEYKEGEGIMPHEDGPLYHPTVTTVSLGSHTLLDFYTPV------------------------DVREGGAPQTEENRFVLSLLVRPRSLLILQEEMYRRLLHGI 182
[Close]
BLAST of mRNA_H-paniculata_contig3347.8964.1 vs. uniprot
Match: A0A6P8H9G0_ACTTE (alpha-ketoglutarate-dependent dioxygenase alkB homolog 6-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8H9G0_ACTTE)

HSP 1 Score: 113 bits (282), Expect = 8.000e-25
Identity = 71/193 (36.79%), Postives = 103/193 (53.37%), Query Frame = 2 
Query:  380 DGIYYVPEFVT-AEEGKRLQ---AAAREREGRGAEWKDLFKRRLQIHGGTPHPSGMVEDELPGFLREVCAALVEAGVFEESSPPNHVLLNEYSEGQGIGPHKDGPLYEGRVAILSLGKEAFLDFWRSLEDAKADCSEAEMAAAAVPSAAAVADARVSDVKQSASTRAVASVQCQDCSLVVFEGQAYYDLWHGI 946
            D +YY+P F+T +EEG  L+   AA + +      W  L  RRLQ  GG PHP GM+++ELP +L++    L    VFE+  P NHVL+NEY  GQGI PH+DGPL+   V+ ++LG    LDF+  + + K D  E             +     ++   S + R V S+  +  SL++  G  Y +  HGI
Sbjct:   22 DSVYYMPNFITTSEEGDLLREVYAAPKPK------WTSLSGRRLQNWGGLPHPKGMIQEELPQWLKKYAVQLGSLCVFEKKIP-NHVLVNEYEPGQGIMPHEDGPLFHPVVSTINLGSHTVLDFYTHVRE-KDDSQEI------------IQQDGSTETNSSMNARHVMSLLLEPRSLLILTGDLYKNYLHGI 194
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3347.8964.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIK0_ECTSI3.010e-11352.462OG-FeII_Oxy_2 domain-containing protein n=2 Tax=E... [more]
L1II63_GUITC1.050e-3847.09Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A7S4KT72_GUITH5.920e-3847.09Hypothetical protein (Fragment) n=1 Tax=Guillardia... [more]
A0A7S1H8U6_HEMAN4.730e-3547.47Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S1GBR1_9STRA1.090e-3345.79Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
UPI001BB260152.430e-2636.68alpha-ketoglutarate-dependent dioxygenase alkB hom... [more]
A0A7M7RD49_STRPU1.640e-2545.93Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A087UC78_STEMI3.030e-2534.74Putative alpha-ketoglutarate-dependent dioxygenase... [more]
A0A4Z2G3Q3_9TELE4.490e-2535.29Alpha-ketoglutarate-dependent dioxygenase alkB 6 n... [more]
A0A6P8H9G0_ACTTE8.000e-2536.79alpha-ketoglutarate-dependent dioxygenase alkB hom... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3347contigH-paniculata_contig3347:5261..12033 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score358.6
Seed ortholog evalue4.2e-96
Seed eggNOG ortholog2880.D8LIK0
KEGG koko:K10768
Hectar predicted targeting categorychloroplast
EggNOG free text desc.ferrous iron binding
EggNOG OGsKOG3200@1,KOG3200@2759
Ec32 ortholog descriptionAlpha-ketoglutarate-dependent dioxygenase AlkB-like
Ec32 orthologEc-18_003330.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons4
Model size1557
Cds size1338
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3347.8964.1prot_H-paniculata_contig3347.8964.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3347 5310..11863 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930033.8348193-UTR-H-paniculata_contig3347:5260..53091622930033.8348193-UTR-H-paniculata_contig3347:5260..5309Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3347 5261..5309 +
1691481119.0971496-UTR-H-paniculata_contig3347:5260..53091691481119.0971496-UTR-H-paniculata_contig3347:5260..5309Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3347 5261..5309 +
1622930033.9312582-UTR-H-paniculata_contig3347:11863..120331622930033.9312582-UTR-H-paniculata_contig3347:11863..12033Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3347 11864..12033 +
1691481119.1482844-UTR-H-paniculata_contig3347:11863..120331691481119.1482844-UTR-H-paniculata_contig3347:11863..12033Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3347 11864..12033 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930033.8558838-CDS-H-paniculata_contig3347:5309..55721622930033.8558838-CDS-H-paniculata_contig3347:5309..5572Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3347 5310..5572 +
1691481119.110341-CDS-H-paniculata_contig3347:5309..55721691481119.110341-CDS-H-paniculata_contig3347:5309..5572Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3347 5310..5572 +
1622930033.8766968-CDS-H-paniculata_contig3347:7993..82501622930033.8766968-CDS-H-paniculata_contig3347:7993..8250Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3347 7994..8250 +
1691481119.1182833-CDS-H-paniculata_contig3347:7993..82501691481119.1182833-CDS-H-paniculata_contig3347:7993..8250Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3347 7994..8250 +
1622930033.8927963-CDS-H-paniculata_contig3347:10103..101961622930033.8927963-CDS-H-paniculata_contig3347:10103..10196Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3347 10104..10196 +
1691481119.1323483-CDS-H-paniculata_contig3347:10103..101961691481119.1323483-CDS-H-paniculata_contig3347:10103..10196Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3347 10104..10196 +
1622930033.9118276-CDS-H-paniculata_contig3347:11138..118631622930033.9118276-CDS-H-paniculata_contig3347:11138..11863Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3347 11139..11863 +
1691481119.1409483-CDS-H-paniculata_contig3347:11138..118631691481119.1409483-CDS-H-paniculata_contig3347:11138..11863Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3347 11139..11863 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3347.8964.1

>prot_H-paniculata_contig3347.8964.1 ID=prot_H-paniculata_contig3347.8964.1|Name=mRNA_H-paniculata_contig3347.8964.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=446bp
MTCTSWLLYLCSIIFATTYGTAFFPSSSASGESNSRVCPVDSDMSGLISS
TALDFQEMMRKERALVLKNQGEKAVADLAGRDASSRMRYLSKRRPRLDLH
RNHRVENNEVDGIYYVPEFVTAEEGKRLQAAAREREGRGAEWKDLFKRRL
QIHGGTPHPSGMVEDELPGFLREVCAALVEAGVFEESSPPNHVLLNEYSE
GQGIGPHKDGPLYEGRVAILSLGKEAFLDFWRSLEDAKADCSEAEMAAAA
VPSAAAVADARVSDVKQSASTRAVASVQCQDCSLVVFEGQAYYDLWHGIA
STVTTTTRGVVGDASGLNQINGERGSVSCSNRSDVMGDNSIRREDGALRN
QEGRHDCRAIPGAVSAGGHENGDRGAGGADDRSGRSSANKRLSFTIRRVA
KIVSADSVVEHAEARSERERRRKFFERSVTETGVSVPPLINADTG*
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mRNA from alignment at H-paniculata_contig3347:5261..12033+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3347.8964.1 ID=mRNA_H-paniculata_contig3347.8964.1|Name=mRNA_H-paniculata_contig3347.8964.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6773bp|location=Sequence derived from alignment at H-paniculata_contig3347:5261..12033+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGAACTTATCACTTTTCAACCTTACCTACACGTGGGCTCTAATGTGCGCA
TGACTTGCACTTCTTGGCTTCTCTATCTATGCAGTATTATCTTTGCGACA
ACGTATGGTACAGCATTTTTTCCTTCTTCCAGTGCAAGTGGGGAGAGCAA
CTCTAGGGTGTGCCCAGTAGACAGTGACATGTCTGGGCTAATCTCGTCGA
CTGCACTGGACTTTCAAGAAATGATGAGGAAGGAACGGGCTCTGGTGCTC
AAGAATCAAGGCGAGAAGGCCGTTGCTGATCTTGCGGGAAGAGATGCCTC
ATCACGAATGAGGTGCGCACTGTTGTGTTGAAACCCTAGAGCTCGAATAC
TTTTGCCATATCCACAACAGATACTCTCTGAAGCTGAACGTGGTGGTTAT
CCCTCCTTAGCACTGTGGAAGATCTTTCGAAAGAAGATACAGGCTGGGCT
CAGCAAGAGACCAAAAACATTCCATAGGTATTTCTTACTTTTATTTTTTG
GAGTTTGGACCTAAAATTTTTTAGGACAGGTACGCATCAAAATTCGGAGG
TCGTCAAAGTTGACACCTTTTGAATTTTTGCTGTTGTTGCGAGCATAATG
GCACTTGATTGATTTTATGGCCGAAAGATCCGTAGTTTATTTCGGAACAA
AAAAAATCAGAAGGTATCATGGTTGACAACCTCCGAAACTTCGATGCGCA
CCTACCCTCAATTTCAAATTTCAGGTCCACATTCCAAAAAACCAAGCGAG
AAATGCCCATTTTGTACAAGTATTACGTACGTCTTAATTCCATTTAGAAG
CGAAGATATCAAACCCAAATTTTGCTTCAGAGATAACCTTGGAACGGTGG
TGAGTTGGGAGCCCAAACCGGTATTATGGTTCTTGTGGTGCCACCAATAT
TCACACCAATTTTGAGAACATTCGGGCATGAACCGGTCACAAATGTAACA
TACTTAGAGTTTTGTACCAACACGCTTGGAAAATAACCGCTAGCAGTCCA
TATTTCATATCGTCATATACTTTGAAACGCCGAAAGTGCCCGGATGGCCG
ATCAGAGCGTTCGGCGCACTCCGTGGTGCTTACACGATTGCATTGCAGGC
AGGCCCACGTTTGTGGTTTTTTTCTCTTTGGATCATGACATTTGGCGTTT
TTGGTGTTTTTTTATGGGTCCAGCCTGTATTATTAGCTCTAATCTGACAG
TAGTAATGTCGAGCGTTCCAGTGAAAAGATATGTACGACGACGATGATTC
CCTGTCTGTGCCGAACGTGCTCTCTGTACTGGACTGACTGCCTGAACAGC
GGCGAATTTTTTATTTTGCTATCTCCCTGTAGTTGCGGCAGGGTGTCATT
TCCCCCTCGCCTTTTCCCGTCTGGATTTTCTGTCGAAAACCGAGTCCAAA
GCGATAAGCATACACTATTTAAGTTATACCCGGTAAAGAAGTCGTCCATA
TGCGGAAAAGGCTCAATTTTTCTCCATATACTGGGGATCATAACGCGCGA
TCCCCGCGTTCAACACCGATGTTGTATGGGCTCAATCTACCCCTCTTAGT
TGGAGGTGCGCTCTTCCCCTAAATTCGGTCTGACTGGCAAACTATCCTCC
GGATTTATAACCGTATGAGCAAGGGGAATACGTTCTCTCCCGGCGTAAGC
ACGCCCTAATTTGGTCGGTTTGTCGAGCATGTCAAATCAATCAGCAGTAT
AGAACTGACTGAGCATACCTCCAAGGGTATTGGCATGCTGTTCTGTTTGT
ACAGTGCTGTTTTCAAACCGCATTCCCATGTTTAGTGCGCACGTAGTTGT
GTGCCTTTGGATATAAACAACTGAAGTTTGAAGTGAGCTGTGCCCCCTGC
CCCCACCCCCCCTCCGTTCCTCCTCCAGTGTGCACACAAATTCGCGTTAG
CATTTGTTTCAGTCAAGTCGATACTTGATTTAATATACGCGGTCCCCAGT
TTCCTGAGCTTGATCCGATTGGAGACGCTCGTCTCATATTTTCCTGCAGT
GAGGCGTGGTGCAACACGGGACTATCTGTGCAGATGTGCCTGTGCATGGA
TCGCTCGAACAATGGTAATTGCGGTACTATGGGCATGTTAAAATGATGGT
TGATCACATCCGTCTGATCGCTTGGTTGTTGTGGATTAAATTCTTTATAT
TCATTGTTTTTCTCTTCAAACGTTTCCGGGAAAAAAGGCTAGCACGCGGC
AAATAATTCTTGCCCGAGAGAGAAGAATACTCTTAAGGTATCCCGCTGTC
AACTCCGACGCTGCCCAGCGAGTAGGACCGCTGCCCTTACCGTACGATAA
TATAGGGCAAGAAGTGAGACGTCTGGATAGCAGATGTGATCCGCGACGAA
ACGATTAATATGTGGATGCTCACCTCCTTGCAGTCCGTGTGTCGATTTCC
ATATGTATATAGGAACGAAAGCAACAGATATGTGGTCGCTACTTTTGAAC
AACAAAACAGAACGCCTGCTCACTCATCACCGATCCGCTCACTATGCTCG
ACTGTTGGTCTTTACACGTGCGGGGGTATCAAAAATATGAAAATGGGGTC
ACATAGACTTGGAAGTTTTCAAGATATGTTTTCAGATTTGGAATCTACGT
TGAAGCAAAAAACGATTTGTATTTTCAACTATTGTCGCTTTCTTCACTTG
ATCGAAAAGGGGGTCAAGGGGCGGTAGGCAGGACATCGGTTTTGATGGCC
CCTTGCTTCATGATGTACTCCAACATATCGCAGGTATCTATCCAAGAGGC
GACCCCGCCTCGACCTCCATCGCAACCATCGAGTGGAGAACAATGAAGTC
GATGGGATATACTACGTGCCAGAGTTCGTCACGGCCGAGGAAGGGAAGCG
GCTACAAGCAGCGGCTCGAGAGCGAGAGGGAAGGGGGGCGGAGTGGAAAG
ATCTGTTCAAACGACGACTTCAGATCCACGGAGGGACCCCTCACCCCTCC
GGCATGGTAGAAGACGAGCTTCCCGGATTTCTTCGTGAAGGTAATGTTTT
GCACCTCGGATGGAGGTTTCACTTTTTCAAGAATGAATAGTTTCAACCTT
TAGCCAAGGAGGCCCGTATCTTTCAGTGCTGGAGTCATGATCCAAATAAT
GTTTTTAGCCCAAGAAAGAGAGGCGGGAAATGATTCGTATCCTCTCTTTT
AGACATACATGTATGATCACTACAGCCCCCCACCCCCGTGACCCATATAA
ATACGATTCTTTTCCACGTACATGGTTTATATAGGGCATTATTTGTGGAA
AACGGCATGCCTATGATCGCGGATCTAAGCGACTAGTGAGTTGGTAAATT
AACATCCTGCCGCGTGAACAGATGCGCACAGCCATCTGTCCGCTACTTGT
GAATATATCCCATGTAGCATACAGGATTGCTGTAAGACTTCAAGTAAATG
GTTATCAATTGTCACCCCTTGCTGCAAGGTGCTGATAAGCTGAGTGTCGA
GCCATGTGACCGCTGTAGCTTGCCTACGGTGAGCCTGCGCGCGAGCGTCA
GCTCATACTGTCAAAACGGTGAAAAAAAAAAATTTCGTTCAAGAGAGGGT
GGGTCGGGGGTGGTGGTGGGGGGTTATGGCTCGTAGGGAACAAGTTATGG
GATCCCTCCCTTTGACGAACCTTTATGCTCGAAGGTAGAACGATCTGTGG
AGGCGGACTCTAGCCCATAATTCCAATACTTCGCGAAGGTGTGAAGGAAG
GACCTTCATGCTATCTACGTCAATTCGACGGATTTTGGAAAGCGCCAAGT
GTTTCCTCGTGCTGTAATCGTTTCAATTTCCCCTATAATCTTCATACTTC
CTCTGTCTGATAAGCACACTCAGTTATGATTATAGGGGCACTTGAACATC
TCCGTTTTTTTTATGGATTATAGGGGCACTTGAACATTCGAACAAATTTC
GTGTCAAACCGTTGGGTTGTAACACCAAAACACACGGCCCGAAAAAAAGT
ACTTGGCCAAGAAAAGGCCCTTTTTTTGGACTTTTGGTATTGTCCCACAA
GTTGTAGAGACGCTCTTGAACTATCTCCGTTTTTTTTTTTTTGTAAAATT
AGAATTCTACATGTTTTTGGGGTTAAGCTCCAAAATATTGAGCCAAATAG
TTGGCTTATAAAACCAAAATACATGCCGTGAAAAAAGCACTCGGCCGAAA
AACGCCCCAAAGTGCTGGTTTTATTTCGACTTCTATGGAGAAAAGTCCCA
TAGAGGGACCTGTTTTCGGCCGAGTACTTTTTGTTCACGGCGCATGTTTT
GGTGTAGAAGGTCAACTGTTTGACCTGAAATTTTGGATTTCAGCCCAAAA
AACATGTAGAATTCCATTTAAAAAACTACATCGGAGATATTTAAGTGCCT
CTATAATCGTAACTGAGTATACCTATGAGACAGGGGAAGTATATGTCCAT
CCGAGCTGCGTAACGTTCGACTTTTTTTGTTTTAGTACACGTGCGAATGC
TTACGTCTATTATGAGGGATATACAGGGGGGGTTCGTCAGTTGTATTTGG
TGTTGGTATTGATGTGCAGGCATTATCCTATTCGATCAGGTGACGGAAGC
CTTGTTAATAACGGGTAAAACTCAGGCGGACAGAGCTTGCACATTTTGTT
TTTCTACTATTTAACACCCACCCTCCCCATATACATGGGCGCGCATGCTT
CAACTCACGCCTCGCGGCTCCTGCTTGCTGCACGTTCGTCTCCATTTAGG
TTGTCTCTGCCTCCTTTAGTTTATGCTAAGACTCTGGATACATGGTTTGC
GTGTGTTGATGCTGTCATTTTCGGCGCTTCTGCTACATAATTGCTGTGGT
TCCGTGGCATTTTTTTTGCGTCGTCCGCACTTTGTATTAACAGTCTGTGC
AGCTCTCGTTGAGGCTGGGGTTTTCGAGGAATCTTCACCGCCGAATCACG
TTCTTCTCAACGAGTACAGCGAGGGACAAGGCATAGGTATGGATGGTGCG
CAGTGATAGTTTCGCTTTTCCTTGCACAACATGTTGAGTCATGATATAGA
GTCTGCGTGTGTTTCCTGCCGGGGCTATAGCTTTCTTTGGCGGGCCAGTA
GATATCGCTTTCACGCAGATGTTTCGATGTGCCAAAATAAACGAAAACTT
GCGGTTGTGCATGGGATCATACCGTGAAACATGACCTAGCAATTTCTTGG
AGGGCTACTTAAAAAATGTCTGAACATGTTACCACTGGGCTGTCATAATT
GCCCAAACTACAGTTGCATTCCCCATTAGATAAAAATAACCCAGCACGGA
TGACTTCCAAGTTTTCTGGATGTTCTTATCAAAGATCGAGTCAATACGGC
CTCCCAAGCCAGGGCGAATCGCCAAAAGCGTGGTAATATCGAGACTCGGC
CACTTGTGACATGCTTCCCATTTCGAGCTTCTTCCAAATACTCGCAAGAT
TCGCTCATAGCCTGGCAACGGTAAGCTCCGCCCTCTACTTTTCCGTCATC
GCCTCGAAAACGCGGCCTTGTACGAATACCCGCTCATGACACCCAACTTT
GTGTTTAAGCAACCCCTCCCGAAACTACTGTACCTCCCGGAGTCCAGATG
CGGCAACTCGTACGGCCTCTGGGTTTGGCGAACGGACCCTCAGAAAACAC
TCAGTCACGCTCGAGTTAATATATAATCTGATCAGAATTTCCCCCAGAGA
GAAGAGAAAATATTCCGGCAATTTTCCCATCTGAATGGTTGAGAAAAACC
TATTGGTAGACGCTCGACGTTAGTGACGGTGATTAGGAATAGTTGCCCGT
GGAGAAGACGCTTATACACTCCGCATGTCAACACAGCGCAAACCCGGGAA
TGGCATCAGGATGCGACTTTGCCACACCACCTCACCTCCTGCTTGTTCTG
CTACCCCCTTGCACGGTGTTGGTGGCAGGCCCTCACAAGGACGGTCCGTT
GTACGAAGGACGGGTCGCGATATTATCCTTGGGCAAGGAAGCATTCTTGG
ATTTTTGGCGATCGCTCGAAGACGCCAAGGCTGATTGTTCCGAAGCGGAG
ATGGCGGCTGCAGCTGTTCCTTCAGCCGCGGCTGTTGCCGACGCGAGGGT
TAGTGACGTCAAACAATCTGCGAGCACAAGAGCGGTGGCTTCTGTGCAGT
GCCAGGACTGCAGTCTCGTGGTGTTCGAAGGCCAGGCTTACTATGACCTG
TGGCACGGCATAGCGAGCACCGTGACTACCACAACACGAGGAGTTGTTGG
GGATGCGAGTGGACTTAACCAAATAAACGGCGAACGTGGGAGTGTGAGCT
GTAGCAATAGGTCGGATGTTATGGGGGATAATAGCATACGTCGAGAAGAT
GGGGCTTTGAGAAACCAGGAGGGACGGCATGACTGTCGGGCGATACCTGG
TGCTGTTTCGGCGGGTGGCCATGAAAACGGTGATCGGGGTGCAGGAGGGG
CAGATGACCGGAGCGGCAGGAGTTCGGCCAATAAGCGCCTTAGTTTTACC
ATTAGGAGAGTCGCCAAAATTGTTTCCGCTGACTCAGTGGTGGAACACGC
AGAGGCAAGGAGTGAGCGTGAGAGGAGAAGGAAATTCTTTGAACGCTCGG
TGACAGAGACGGGTGTTTCGGTGCCCCCTTTGATAAATGCAGACACCGGG
TGATGAGATGACACACGCGAGTCATGTGGAGCTTTGGTTATCAAACGAGT
CAATGCGAGGCGTTTATCACGTGGGCCACGGCGTATTTGGGACACCTGTC
GCAGGAGGAGCAGTTGTAGATGTATTTTGTCTAAAACCCTAAAACGAACG
ATTTATCCACCATTTATTTAGGC
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Coding sequence (CDS) from alignment at H-paniculata_contig3347:5261..12033+

>mRNA_H-paniculata_contig3347.8964.1 ID=mRNA_H-paniculata_contig3347.8964.1|Name=mRNA_H-paniculata_contig3347.8964.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2676bp|location=Sequence derived from alignment at H-paniculata_contig3347:5261..12033+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACTTGCACTTCTTGGCTTCTCTATCTATGCAGTATTATCTTTGCGAC
AACGTATGGTACAGCATTTTTTCCTTCTTCCAGTGCAAGTGGGGAGAGCA
ACTCTAGGGTGTGCCCAGTAGACAGTGACATGTCTGGGCTAATCTCGTCG
ACTGCACTGGACTTTCAAGAAATGATGAGGAAGGAACGGGCTCTGGTGCT
CAAGAATCAAGGCGAGAAGGCCGTTGCTGATCTTGCGGGAAGAGATGCCT
CATCACGAATGAGATGACTTGCACTTCTTGGCTTCTCTATCTATGCAGTA
TTATCTTTGCGACAACGTATGGTACAGCATTTTTTCCTTCTTCCAGTGCA
AGTGGGGAGAGCAACTCTAGGGTGTGCCCAGTAGACAGTGACATGTCTGG
GCTAATCTCGTCGACTGCACTGGACTTTCAAGAAATGATGAGGAAGGAAC
GGGCTCTGGTGCTCAAGAATCAAGGCGAGAAGGCCGTTGCTGATCTTGCG
GGAAGAGATGCCTCATCACGAATGAGGTATCTATCCAAGAGGCGACCCCG
CCTCGACCTCCATCGCAACCATCGAGTGGAGAACAATGAAGTCGATGGGA
TATACTACGTGCCAGAGTTCGTCACGGCCGAGGAAGGGAAGCGGCTACAA
GCAGCGGCTCGAGAGCGAGAGGGAAGGGGGGCGGAGTGGAAAGATCTGTT
CAAACGACGACTTCAGATCCACGGAGGGACCCCTCACCCCTCCGGCATGG
TAGAAGACGAGCTTCCCGGATTTCTTCGTGAAGGTATCTATCCAAGAGGC
GACCCCGCCTCGACCTCCATCGCAACCATCGAGTGGAGAACAATGAAGTC
GATGGGATATACTACGTGCCAGAGTTCGTCACGGCCGAGGAAGGGAAGCG
GCTACAAGCAGCGGCTCGAGAGCGAGAGGGAAGGGGGGCGGAGTGGAAAG
ATCTGTTCAAACGACGACTTCAGATCCACGGAGGGACCCCTCACCCCTCC
GGCATGGTAGAAGACGAGCTTCCCGGATTTCTTCGTGAAGTCTGTGCAGC
TCTCGTTGAGGCTGGGGTTTTCGAGGAATCTTCACCGCCGAATCACGTTC
TTCTCAACGAGTACAGCGAGGGACAAGGCATAGTCTGTGCAGCTCTCGTT
GAGGCTGGGGTTTTCGAGGAATCTTCACCGCCGAATCACGTTCTTCTCAA
CGAGTACAGCGAGGGACAAGGCATAGGCCCTCACAAGGACGGTCCGTTGT
ACGAAGGACGGGTCGCGATATTATCCTTGGGCAAGGAAGCATTCTTGGAT
TTTTGGCGATCGCTCGAAGACGCCAAGGCTGATTGTTCCGAAGCGGAGAT
GGCGGCTGCAGCTGTTCCTTCAGCCGCGGCTGTTGCCGACGCGAGGGTTA
GTGACGTCAAACAATCTGCGAGCACAAGAGCGGTGGCTTCTGTGCAGTGC
CAGGACTGCAGTCTCGTGGTGTTCGAAGGCCAGGCTTACTATGACCTGTG
GCACGGCATAGCGAGCACCGTGACTACCACAACACGAGGAGTTGTTGGGG
ATGCGAGTGGACTTAACCAAATAAACGGCGAACGTGGGAGTGTGAGCTGT
AGCAATAGGTCGGATGTTATGGGGGATAATAGCATACGTCGAGAAGATGG
GGCTTTGAGAAACCAGGAGGGACGGCATGACTGTCGGGCGATACCTGGTG
CTGTTTCGGCGGGTGGCCATGAAAACGGTGATCGGGGTGCAGGAGGGGCA
GATGACCGGAGCGGCAGGAGTTCGGCCAATAAGCGCCTTAGTTTTACCAT
TAGGAGAGTCGCCAAAATTGTTTCCGCTGACTCAGTGGTGGAACACGCAG
AGGCAAGGAGTGAGCGTGAGAGGAGAAGGAAATTCTTTGAACGCTCGGTG
ACAGAGACGGGTGTTTCGGTGCCCCCTTTGATAAATGCAGACACCGGGTG
AGCCCTCACAAGGACGGTCCGTTGTACGAAGGACGGGTCGCGATATTATC
CTTGGGCAAGGAAGCATTCTTGGATTTTTGGCGATCGCTCGAAGACGCCA
AGGCTGATTGTTCCGAAGCGGAGATGGCGGCTGCAGCTGTTCCTTCAGCC
GCGGCTGTTGCCGACGCGAGGGTTAGTGACGTCAAACAATCTGCGAGCAC
AAGAGCGGTGGCTTCTGTGCAGTGCCAGGACTGCAGTCTCGTGGTGTTCG
AAGGCCAGGCTTACTATGACCTGTGGCACGGCATAGCGAGCACCGTGACT
ACCACAACACGAGGAGTTGTTGGGGATGCGAGTGGACTTAACCAAATAAA
CGGCGAACGTGGGAGTGTGAGCTGTAGCAATAGGTCGGATGTTATGGGGG
ATAATAGCATACGTCGAGAAGATGGGGCTTTGAGAAACCAGGAGGGACGG
CATGACTGTCGGGCGATACCTGGTGCTGTTTCGGCGGGTGGCCATGAAAA
CGGTGATCGGGGTGCAGGAGGGGCAGATGACCGGAGCGGCAGGAGTTCGG
CCAATAAGCGCCTTAGTTTTACCATTAGGAGAGTCGCCAAAATTGTTTCC
GCTGACTCAGTGGTGGAACACGCAGAGGCAAGGAGTGAGCGTGAGAGGAG
AAGGAAATTCTTTGAACGCTCGGTGACAGAGACGGGTGTTTCGGTGCCCC
CTTTGATAAATGCAGACACCGGGTGA
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